AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0224420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224420 MtrunA17_Chr2g0330411 99.647 283 1 0 1 283 1 283 0.0 575
Msa0224420 MtrunA17_Chr2g0308551 36.842 285 138 5 13 255 1 285 7.76e-49 164
Msa0224420 MtrunA17_Chr7g0221311 36.859 312 162 9 1 281 1 308 4.14e-47 162
Msa0224420 MtrunA17_Chr4g0073281 35.065 231 149 1 32 262 1 230 1.15e-40 142
Msa0224420 MtrunA17_Chr5g0431341 31.224 237 152 5 44 270 37 272 1.97e-35 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224420 AT1G55170.1 51.049 286 132 4 1 282 1 282 1.77e-86 260
Msa0224420 AT3G14750.1 38.696 230 131 3 37 257 63 291 1.73e-46 159
Msa0224420 AT1G67170.2 38.647 207 127 0 33 239 47 253 5.67e-42 148
Msa0224420 AT1G67170.1 38.647 207 127 0 33 239 47 253 5.67e-42 148
Msa0224420 AT2G30120.5 26.957 230 154 1 42 257 37 266 2.59e-21 91.7
Msa0224420 AT2G30120.4 26.754 228 153 1 42 255 37 264 6.04e-21 90.1
Msa0224420 AT2G30120.2 26.638 229 154 1 41 255 36 264 6.70e-21 90.5
Msa0224420 AT5G61920.3 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0224420 AT5G61920.5 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0224420 AT5G61920.2 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0224420 AT5G61920.6 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0224420 AT5G61920.1 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0224420 AT5G61920.4 28.902 173 123 0 49 221 17 189 1.55e-16 76.6
Msa0224420 AT2G30120.3 27.972 143 103 0 39 181 34 176 1.13e-11 62.8
Msa0224420 AT2G30120.1 27.972 143 103 0 39 181 34 176 1.64e-11 62.0
Msa0224420 AT2G30120.6 27.972 143 103 0 39 181 34 176 1.64e-11 62.0

Find 169 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCTTCAATTTCTAATT+AGG 0.149861 2_1:+74301287 Msa0224420:five_prime_UTR
CTACACTTTGTAATAAATTA+TGG 0.161788 2_1:-74307730 None:intergenic
GCAGAGAAAGGTCCTCTTTA+TGG 0.176094 2_1:+74303410 Msa0224420:CDS
TTGCCTTATGGAACAAATTT+TGG 0.192469 2_1:+74303241 Msa0224420:CDS
CGAAATGTTTCAACGTGTTT+TGG 0.209278 2_1:+74307594 Msa0224420:three_prime_UTR
CGCAAAATCTCGCAGCATTA+TGG 0.232507 2_1:-74306989 None:intergenic
AAACCGGGTGAAATGTATTA+TGG 0.235292 2_1:+74307047 Msa0224420:three_prime_UTR
ATTCATGCAGGTTTGCCTTA+TGG 0.235597 2_1:+74303229 Msa0224420:intron
AAACTATATGCATGATTAAA+TGG 0.243539 2_1:-74307809 None:intergenic
ATGGGGTGGGTACTGCTTCT+AGG 0.246552 2_1:+74303429 Msa0224420:CDS
CACTTACGAAAGATGTTTCT+AGG 0.253529 2_1:+74302166 Msa0224420:CDS
AGTATCAAACAAGAACTTTC+TGG 0.261139 2_1:+74302132 Msa0224420:CDS
AAAATTAAGCCACTAGGATT+TGG 0.264537 2_1:+74307884 Msa0224420:three_prime_UTR
AGTTTCTTGCACGCTCTATT+TGG 0.269956 2_1:+74307560 Msa0224420:three_prime_UTR
CAAAACACGTTGAAACATTT+CGG 0.287707 2_1:-74307593 None:intergenic
TAAAAGCTCTTTGAGTTATA+CGG 0.292488 2_1:-74301166 None:intergenic
TTGAGTTATACGGCGTCGTT+TGG 0.293424 2_1:-74301156 None:intergenic
TTGGAAATGAAAGCTTTAAA+AGG 0.310780 2_1:+74307172 Msa0224420:three_prime_UTR
TACACTTTGTAATAAATTAT+GGG 0.316188 2_1:-74307729 None:intergenic
CACGAAGTTTCTCAACTTCT+CGG 0.317894 2_1:-74302463 None:intergenic
GAGATAAAAGACCATTAAAA+TGG 0.326020 2_1:-74303577 None:intergenic
ACCTAGCACGCATCAGTTCT+TGG 0.336174 2_1:-74302245 None:intergenic
ACCTCATCCAGCATTGTTAG+AGG 0.338446 2_1:+74301837 Msa0224420:CDS
CCTCCATATGCAGATGGATA+TGG 0.340583 2_1:+74303286 Msa0224420:CDS
TCTTCCTACTCGCGTCTAAA+TGG 0.346507 2_1:-74307775 None:intergenic
CAGAGAAAGGTCCTCTTTAT+GGG 0.349670 2_1:+74303411 Msa0224420:CDS
ATTAGTTGAAAATGCAAAAC+CGG 0.350376 2_1:+74307031 Msa0224420:three_prime_UTR
TCAACCAAGCTGAAAGTATA+TGG 0.362301 2_1:-74307352 None:intergenic
GAGCGTGCGGGGAAACTCAT+AGG 0.367451 2_1:+74307669 Msa0224420:three_prime_UTR
TCAATGAGATCTGAGATTGA+TGG 0.370744 2_1:+74302216 Msa0224420:CDS
CAATCTAAAATTTGGAAATC+AGG 0.374042 2_1:-74307446 None:intergenic
GGAGGCTGGTGGCGGATAAC+AGG 0.382841 2_1:+74301890 Msa0224420:CDS
GCATTTGACATTTGAGTAGA+TGG 0.387169 2_1:+74307516 Msa0224420:three_prime_UTR
CTTCCGATGGATACCCTCTT+CGG 0.387777 2_1:-74301768 None:intergenic
CCCGCACGCTCTATGAAGTT+CGG 0.395759 2_1:-74307657 None:intergenic
GAAGGCAAACATGGAGTTCA+TGG 0.395776 2_1:+74302400 Msa0224420:CDS
TTCAATTGGGTTGTCCTCCT+TGG 0.404053 2_1:+74307322 Msa0224420:three_prime_UTR
TGAGTTATACGGCGTCGTTT+GGG 0.409841 2_1:-74301155 None:intergenic
CTACCAAAATTTGTTCCATA+AGG 0.410355 2_1:-74303244 None:intergenic
AACCGGGTGAAATGTATTAT+GGG 0.424403 2_1:+74307048 Msa0224420:three_prime_UTR
TGAAGTTGGAGTCTGATCTT+AGG 0.426762 2_1:+74302049 Msa0224420:CDS
GGTGGTGGCCCGCGAGCATA+AGG 0.435456 2_1:-74301793 None:intergenic
TAGCATGGATGGAAGACATT+GGG 0.438242 2_1:+74302496 Msa0224420:CDS
TTTCTCAACTTCTCGGGCCA+TGG 0.443621 2_1:-74302456 None:intergenic
TTCCGATGGATACCCTCTTC+GGG 0.447941 2_1:-74301767 None:intergenic
AAACATCTTTCGTAAGTGTC+TGG 0.450505 2_1:-74302161 None:intergenic
GTTTAGGCTGCTGCAGAGAA+AGG 0.464656 2_1:+74303398 Msa0224420:intron
GATGGAAGACATTGGGGAGC+TGG 0.465511 2_1:+74302503 Msa0224420:CDS
GTATCAAACAAGAACTTTCT+GGG 0.473347 2_1:+74302133 Msa0224420:CDS
TCAATCTCAGATCTCATTGA+AGG 0.475047 2_1:-74302213 None:intergenic
AATGAAAGCTTTAAAAGGTA+TGG 0.476327 2_1:+74307177 Msa0224420:three_prime_UTR
CTTACCATATACTTTCAGCT+TGG 0.476694 2_1:+74307348 Msa0224420:three_prime_UTR
GCTGAGGGCAAGTAGGGCAC+AGG 0.477124 2_1:+74307070 Msa0224420:three_prime_UTR
GATAGTATGCATGAGGTCCT+AGG 0.482561 2_1:+74307906 Msa0224420:three_prime_UTR
ACGAAGTTTCTCAACTTCTC+GGG 0.483936 2_1:-74302462 None:intergenic
TATAGGGTATGTATGCCGTT+CGG 0.486695 2_1:+74307624 Msa0224420:three_prime_UTR
TACTTCGCTAACACAGCTAA+AGG 0.487483 2_1:-74303530 None:intergenic
AGCTCTTCCTCTAACAATGC+TGG 0.487736 2_1:-74301844 None:intergenic
GCCGATGGTTTAATTGTGCT+TGG 0.489864 2_1:+74307413 Msa0224420:three_prime_UTR
CAAAACTAATTGTATGTTGG+TGG 0.493246 2_1:+74307957 Msa0224420:three_prime_UTR
ACACCATATCCATCTGCATA+TGG 0.495250 2_1:-74303289 None:intergenic
AGCTTTCATTTCCAATCTCA+CGG 0.498392 2_1:-74307164 None:intergenic
GCGAGACCTTGCAGCTGCGA+AGG 0.508426 2_1:+74301942 Msa0224420:CDS
TATGGTGGATTATGAAAAGA+AGG 0.509898 2_1:+74302382 Msa0224420:CDS
CATCGTATGAATTTAGCGAT+TGG 0.510394 2_1:+74301973 Msa0224420:CDS
TACCCTCTTCGGGAACTCAT+TGG 0.513298 2_1:-74301757 None:intergenic
AAGAAGAGGGTCGCGTACGA+TGG 0.513958 2_1:-74301229 None:intergenic
ACTTCGCTAACACAGCTAAA+GGG 0.514081 2_1:-74303529 None:intergenic
TCCTCTAACAATGCTGGATG+AGG 0.514770 2_1:-74301838 None:intergenic
CTCGCAGCATTATGGTGTGT+GGG 0.516947 2_1:-74306981 None:intergenic
TGCTGTCGTGGCATTGGTGG+TGG 0.516987 2_1:-74301808 None:intergenic
TATCCATCTGCATATGGAGG+TGG 0.517988 2_1:-74303283 None:intergenic
AAAACTAATTGTATGTTGGT+GGG 0.519407 2_1:+74307958 Msa0224420:three_prime_UTR
GCTGAGCTTGCTAGCATGGA+TGG 0.521001 2_1:+74302485 Msa0224420:CDS
TCGTGCTGAGCTTGCTAGCA+TGG 0.521988 2_1:+74302481 Msa0224420:CDS
CTGAACATGAGATGCATTCG+AGG 0.524074 2_1:+74302007 Msa0224420:CDS
GTGTTATCTTGATCCATCAC+AGG 0.526559 2_1:-74307105 None:intergenic
GCAGTACCCACCCCATAAAG+AGG 0.528840 2_1:-74303422 None:intergenic
AGACCTTGCAGCTGCGAAGG+AGG 0.529458 2_1:+74301945 Msa0224420:CDS
CATGGAACAGAGGCAGTCAA+TGG 0.533149 2_1:+74302418 Msa0224420:CDS
GAAAGCTTTAAAAGGTATGG+TGG 0.533811 2_1:+74307180 Msa0224420:three_prime_UTR
TATGGTTGCAGATGGAGAGC+TGG 0.534739 2_1:+74306923 Msa0224420:intron
TGTATAACTTCATTCTTCAA+CGG 0.535567 2_1:-74302081 None:intergenic
AAACTAATTGTATGTTGGTG+GGG 0.541491 2_1:+74307959 Msa0224420:three_prime_UTR
CTACAAAACTAATTGTATGT+TGG 0.543536 2_1:+74307954 Msa0224420:three_prime_UTR
GTGAAATGTATTATGGGCTG+AGG 0.545481 2_1:+74307054 Msa0224420:three_prime_UTR
AAATGCACAAGCCCAACTAA+AGG 0.546910 2_1:-74307499 None:intergenic
GGAATATGCTGTCGTGGCAT+TGG 0.548596 2_1:-74301814 None:intergenic
TCTAACAATGCTGGATGAGG+TGG 0.550555 2_1:-74301835 None:intergenic
CCTCTTCGGGAACTCATTGG+TGG 0.551456 2_1:-74301754 None:intergenic
TTATGGGCTGAGGGCAAGTA+GGG 0.551600 2_1:+74307064 Msa0224420:three_prime_UTR
TGATGAAAGAGTTTATCAGC+AGG 0.553082 2_1:+74307372 Msa0224420:three_prime_UTR
TAGGAAATGTACCTACTGAT+GGG 0.553548 2_1:+74307750 Msa0224420:three_prime_UTR
AGAGCGTGCAAGAAACTCAT+GGG 0.554161 2_1:-74307554 None:intergenic
AACACAGCTAAAGGGATGGC+AGG 0.555700 2_1:-74303521 None:intergenic
TATCAAAACACAACAAAGGC+AGG 0.556096 2_1:-74307135 None:intergenic
CTAGCATGGATGGAAGACAT+TGG 0.560779 2_1:+74302495 Msa0224420:CDS
AGCCCATAATACATTTCACC+CGG 0.563030 2_1:-74307050 None:intergenic
TCGGAAGGTCCTTATGCTCG+CGG 0.566608 2_1:+74301784 Msa0224420:CDS
ACCAAGAACTGATGCGTGCT+AGG 0.567292 2_1:+74302244 Msa0224420:CDS
TAGAGCGTGCAAGAAACTCA+TGG 0.567427 2_1:-74307555 None:intergenic
TCAACTAATGAAGAACATCT+CGG 0.568018 2_1:-74307017 None:intergenic
CTGAGGGCAAGTAGGGCACA+GGG 0.571813 2_1:+74307071 Msa0224420:three_prime_UTR
GGAGGTAACGACTTCAACCT+AGG 0.571856 2_1:-74307923 None:intergenic
TTATGAAAAGAAGGCAAACA+TGG 0.573229 2_1:+74302391 Msa0224420:CDS
CAAGCTGAAAGTATATGGTA+AGG 0.574343 2_1:-74307347 None:intergenic
GCTCCTCCTTCGCAGCTGCA+AGG 0.574836 2_1:-74301948 None:intergenic
CCGAACTTCATAGAGCGTGC+GGG 0.574973 2_1:+74307657 Msa0224420:three_prime_UTR
ATTATGGGCTGAGGGCAAGT+AGG 0.575314 2_1:+74307063 Msa0224420:three_prime_UTR
GTAGGAAATGTACCTACTGA+TGG 0.577220 2_1:+74307749 Msa0224420:three_prime_UTR
ATTCAACGACGGTTTGAGCG+AGG 0.579107 2_1:-74303467 None:intergenic
AAAGGTCCTCTTTATGGGGT+GGG 0.581180 2_1:+74303416 Msa0224420:CDS
TGAATCTAAGTGATTGATGT+TGG 0.581375 2_1:+74303485 Msa0224420:exon
TCTCGCAGCATTATGGTGTG+TGG 0.585323 2_1:-74306982 None:intergenic
CGCTAACACAGCTAAAGGGA+TGG 0.585429 2_1:-74303525 None:intergenic
GAAAGGTCCTCTTTATGGGG+TGG 0.586390 2_1:+74303415 Msa0224420:CDS
CGTGCAAGAAACTCATGGGG+TGG 0.589626 2_1:-74307550 None:intergenic
ATATGCTGTCGTGGCATTGG+TGG 0.591214 2_1:-74301811 None:intergenic
ACAGGAGGTTGATTGATGAT+CGG 0.594043 2_1:+74301908 Msa0224420:CDS
TTCCCACCTCCATATGCAGA+TGG 0.594536 2_1:+74303280 Msa0224420:CDS
AGCGTGCGGGGAAACTCATA+GGG 0.594706 2_1:+74307670 Msa0224420:three_prime_UTR
ACCAAGCACAATTAAACCAT+CGG 0.596035 2_1:-74307414 None:intergenic
ATCCATCTGCATATGGAGGT+GGG 0.596363 2_1:-74303282 None:intergenic
CGGAAGGTCCTTATGCTCGC+GGG 0.597736 2_1:+74301785 Msa0224420:CDS
TCCGAACTTCATAGAGCGTG+CGG 0.599188 2_1:+74307656 Msa0224420:three_prime_UTR
CAAACAAGAACTTTCTGGGA+AGG 0.599275 2_1:+74302137 Msa0224420:CDS
TAGCTGTGTTAGCGAAGTAG+CGG 0.599283 2_1:+74303534 Msa0224420:three_prime_UTR
TTGATGTTGGTGATGAAGAA+AGG 0.600863 2_1:+74303498 Msa0224420:three_prime_UTR
TGAAATGAGGAGGCTGGTGG+CGG 0.604523 2_1:+74301882 Msa0224420:CDS
GCATGCTGAAATGAGGAGGC+TGG 0.605896 2_1:+74301876 Msa0224420:CDS
GTCGTGTATATTGATTGACT+CGG 0.606157 2_1:+74301197 Msa0224420:five_prime_UTR
GGCTGGTGGCGGATAACAGG+AGG 0.608308 2_1:+74301893 Msa0224420:CDS
GTGCAAGAAACTCATGGGGT+GGG 0.610385 2_1:-74307549 None:intergenic
TTAGTTGAAAATGCAAAACC+GGG 0.613401 2_1:+74307032 Msa0224420:three_prime_UTR
CATAATTTATTACAAAGTGT+AGG 0.614382 2_1:+74307731 Msa0224420:three_prime_UTR
CACCAATGAGTTCCCGAAGA+GGG 0.614590 2_1:+74301755 Msa0224420:CDS
CGAGCATAAGGACCTTCCGA+TGG 0.617038 2_1:-74301781 None:intergenic
GGGGCCATTTAGACGCGAGT+AGG 0.619983 2_1:+74307771 Msa0224420:three_prime_UTR
CGAAGAGGGTATCCATCGGA+AGG 0.623087 2_1:+74301769 Msa0224420:CDS
AAGTGCAGCATGCTGAAATG+AGG 0.630681 2_1:+74301869 Msa0224420:CDS
CGAACTTCATAGAGCGTGCG+GGG 0.635643 2_1:+74307658 Msa0224420:three_prime_UTR
AGGAAATGTACCTACTGATG+GGG 0.638320 2_1:+74307751 Msa0224420:three_prime_UTR
TGAAATGTATTATGGGCTGA+GGG 0.638805 2_1:+74307055 Msa0224420:three_prime_UTR
TTCCCGAAGAGGGTATCCAT+CGG 0.640372 2_1:+74301765 Msa0224420:CDS
AAAATATCAAAACACAACAA+AGG 0.643607 2_1:-74307139 None:intergenic
TGTTATCTTGATCCATCACA+GGG 0.644177 2_1:-74307104 None:intergenic
TCGCAGCATTATGGTGTGTG+GGG 0.649104 2_1:-74306980 None:intergenic
GGATTTGGATAGTATGCATG+AGG 0.650640 2_1:+74307899 Msa0224420:three_prime_UTR
AAGTATATGGTAAGGCACCA+AGG 0.652745 2_1:-74307339 None:intergenic
AGCATGGATGGAAGACATTG+GGG 0.653311 2_1:+74302497 Msa0224420:CDS
TGAGGTGGAATATGCTGTCG+TGG 0.657020 2_1:-74301820 None:intergenic
CCATATCCATCTGCATATGG+AGG 0.657742 2_1:-74303286 None:intergenic
GTGCGGGGAAACTCATAGGG+TGG 0.658360 2_1:+74307673 Msa0224420:three_prime_UTR
GGAAATGTACCTACTGATGG+GGG 0.669640 2_1:+74307752 Msa0224420:three_prime_UTR
GATGAAAGAGTTTATCAGCA+GGG 0.669777 2_1:+74307373 Msa0224420:three_prime_UTR
GCATACTATCCAAATCCTAG+TGG 0.669807 2_1:-74307893 None:intergenic
TGCTGAAATGAGGAGGCTGG+TGG 0.673111 2_1:+74301879 Msa0224420:CDS
TGAACATGAGATGCATTCGA+GGG 0.676175 2_1:+74302008 Msa0224420:CDS
TTCGGATTATAGAATCCGAA+CGG 0.677219 2_1:-74307639 None:intergenic
AGAGAAAGGTCCTCTTTATG+GGG 0.677550 2_1:+74303412 Msa0224420:CDS
TGCAGCATGCTGAAATGAGG+AGG 0.680683 2_1:+74301872 Msa0224420:CDS
CAATCACTTAGATTCAACGA+CGG 0.682596 2_1:-74303478 None:intergenic
TTGGTGGCTCTCTATGAACA+CGG 0.684269 2_1:-74301738 None:intergenic
ACATGGAGTTCATGGAACAG+AGG 0.685058 2_1:+74302408 Msa0224420:CDS
CCACCAATGAGTTCCCGAAG+AGG 0.693852 2_1:+74301754 Msa0224420:CDS
AGATGGATATGGTGTTCACA+TGG 0.705947 2_1:+74303297 Msa0224420:CDS
GAGCGTGCAAGAAACTCATG+GGG 0.720273 2_1:-74307553 None:intergenic
GAAAGAGTTTATCAGCAGGG+CGG 0.743630 2_1:+74307376 Msa0224420:three_prime_UTR
TATATGGTAAGGCACCAAGG+AGG 0.776037 2_1:-74307336 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAGCTTAAAAAAAATT+TGG + chr2_1:74304871-74304890 Msa0224420:intron 10.0%
!!! ATTTTTGTTTTATAGAACTA+TGG + chr2_1:74302364-74302383 Msa0224420:intron 15.0%
!! TTAATAAAAGACATGAAAAA+CGG + chr2_1:74302681-74302700 Msa0224420:intron 15.0%
!!! TTTTTAGAATTTAAGGTAAT+TGG + chr2_1:74302809-74302828 Msa0224420:intron 15.0%
!!! ATATACTGTTAATTTTAAAC+TGG + chr2_1:74303616-74303635 Msa0224420:intron 15.0%
!! AAAACATGAAATATTATCAA+TGG - chr2_1:74303751-74303770 None:intergenic 15.0%
!!! TGTTTAGTTATTATTTGTTT+TGG + chr2_1:74303792-74303811 Msa0224420:intron 15.0%
!!! GTTTAGTTATTATTTGTTTT+GGG + chr2_1:74303793-74303812 Msa0224420:intron 15.0%
!!! TTTAGTTATTATTTGTTTTG+GGG + chr2_1:74303794-74303813 Msa0224420:intron 15.0%
!!! AAACTTTAAAGCTTAATTTA+TGG + chr2_1:74304117-74304136 Msa0224420:intron 15.0%
!! ATTAAAAGCTTAAAATTGTT+TGG + chr2_1:74304815-74304834 Msa0224420:intron 15.0%
!! TGTATAACAATAGTATTTAA+GGG + chr2_1:74305054-74305073 Msa0224420:intron 15.0%
!! ATAAAAAATGAGAAACTTTA+TGG - chr2_1:74305183-74305202 None:intergenic 15.0%
!! AATCTATTATATTTATGGAT+GGG + chr2_1:74305432-74305451 Msa0224420:intron 15.0%
!!! AATTAGTTTCGTATTAATAT+GGG - chr2_1:74305725-74305744 None:intergenic 15.0%
!!! TAATTAGTTTCGTATTAATA+TGG - chr2_1:74305726-74305745 None:intergenic 15.0%
!! TATAATAATAACAACAGATA+TGG - chr2_1:74306052-74306071 None:intergenic 15.0%
!!! ATATCTGTTGTTATTATTAT+AGG + chr2_1:74306051-74306070 Msa0224420:intron 15.0%
!!! ATGTCATATTTTTTTTGAAA+AGG + chr2_1:74306721-74306740 Msa0224420:intron 15.0%
!! ATAATAATAGATACAAAGTT+AGG - chr2_1:74306906-74306925 None:intergenic 15.0%
!! TAACTTTGTATCTATTATTA+TGG + chr2_1:74306905-74306924 Msa0224420:intron 15.0%
!! TACACTTTGTAATAAATTAT+GGG - chr2_1:74307732-74307751 None:intergenic 15.0%
!! ATTCTCTTCAATTTCTAATT+AGG + chr2_1:74301287-74301306 Msa0224420:five_prime_UTR 20.0%
!! ATCAAAAACATCAAATTCAT+GGG - chr2_1:74301419-74301438 None:intergenic 20.0%
!! AATCAAAAACATCAAATTCA+TGG - chr2_1:74301420-74301439 None:intergenic 20.0%
!! TTTGTACTAATGGAAATAAA+AGG - chr2_1:74301512-74301531 None:intergenic 20.0%
!!! TGTTGATAAAAATATGAAGT+TGG + chr2_1:74302035-74302054 Msa0224420:CDS 20.0%
!! AATGAAATGACATGAATAAT+AGG + chr2_1:74302650-74302669 Msa0224420:intron 20.0%
!!! TTTTGTGTATTATGTGATTA+CGG - chr2_1:74302780-74302799 None:intergenic 20.0%
!! ATCCTATTATTTGTGTTAAT+TGG + chr2_1:74303074-74303093 Msa0224420:intron 20.0%
!! ATCCAATTAACACAAATAAT+AGG - chr2_1:74303079-74303098 None:intergenic 20.0%
!! GTATATTAAGAATTGCAAAT+AGG - chr2_1:74303602-74303621 None:intergenic 20.0%
!!! AAGTTTAAAACTTATTGTGT+TGG + chr2_1:74303703-74303722 Msa0224420:intron 20.0%
!!! TTTTAGAGTATGTTTCTTTT+AGG + chr2_1:74304155-74304174 Msa0224420:intron 20.0%
!! TTATGTTACAAATGGTTATT+TGG + chr2_1:74304343-74304362 Msa0224420:intron 20.0%
!! TATGTTACAAATGGTTATTT+GGG + chr2_1:74304344-74304363 Msa0224420:intron 20.0%
!!! TGCAAAAGATATTTAAGATT+GGG + chr2_1:74304502-74304521 Msa0224420:intron 20.0%
!! AAAAAAATTTGGTTAGACTT+CGG + chr2_1:74304882-74304901 Msa0224420:intron 20.0%
!! TGCAAACTATTTATTTGAAA+TGG + chr2_1:74304974-74304993 Msa0224420:intron 20.0%
!! TCTAATCTTATCTTTAGATT+GGG - chr2_1:74305011-74305030 None:intergenic 20.0%
!! ATCTAATCTTATCTTTAGAT+TGG - chr2_1:74305012-74305031 None:intergenic 20.0%
!! AATACTATTGTTATACAGAT+CGG - chr2_1:74305051-74305070 None:intergenic 20.0%
!! CTGTATAACAATAGTATTTA+AGG + chr2_1:74305053-74305072 Msa0224420:intron 20.0%
!! GTATAACAATAGTATTTAAG+GGG + chr2_1:74305055-74305074 Msa0224420:intron 20.0%
!! TATAACAATAGTATTTAAGG+GGG + chr2_1:74305056-74305075 Msa0224420:intron 20.0%
!!! AAGTTTCTCATTTTTTATAG+TGG + chr2_1:74305185-74305204 Msa0224420:intron 20.0%
!! ACGACAATCTATTATATTTA+TGG + chr2_1:74305427-74305446 Msa0224420:intron 20.0%
!! CAATCTATTATATTTATGGA+TGG + chr2_1:74305431-74305450 Msa0224420:intron 20.0%
!! ATCTATTATATTTATGGATG+GGG + chr2_1:74305433-74305452 Msa0224420:intron 20.0%
!! TAATTCTTGAGATTCATAAT+AGG - chr2_1:74305960-74305979 None:intergenic 20.0%
!! AAAATATCAAAACACAACAA+AGG - chr2_1:74307142-74307161 None:intergenic 20.0%
!!! ATGAACATAAAAAGCTTTTA+AGG + chr2_1:74307215-74307234 Msa0224420:three_prime_UTR 20.0%
!! GGAAAAAGAAAAAAAGAAAA+GGG - chr2_1:74307481-74307500 None:intergenic 20.0%
!! AGGAAAAAGAAAAAAAGAAA+AGG - chr2_1:74307482-74307501 None:intergenic 20.0%
!!! TTTTTTCTTTTTCCTTTAGT+TGG + chr2_1:74307487-74307506 Msa0224420:three_prime_UTR 20.0%
!!! TTTTTCTTTTTCCTTTAGTT+GGG + chr2_1:74307488-74307507 Msa0224420:three_prime_UTR 20.0%
!! GGTGGAAAAAAAAAAAAAAA+AGG + chr2_1:74307691-74307710 Msa0224420:three_prime_UTR 20.0%
!! GGAAAAAAAAAAAAAAAAGG+CGG + chr2_1:74307694-74307713 Msa0224420:three_prime_UTR 20.0%
!! CTACACTTTGTAATAAATTA+TGG - chr2_1:74307733-74307752 None:intergenic 20.0%
!! CATAATTTATTACAAAGTGT+AGG + chr2_1:74307731-74307750 Msa0224420:three_prime_UTR 20.0%
!! AAACTATATGCATGATTAAA+TGG - chr2_1:74307812-74307831 None:intergenic 20.0%
!! TAAAAGCTCTTTGAGTTATA+CGG - chr2_1:74301169-74301188 None:intergenic 25.0%
!!! TCACGTGTGTTTATATTTTT+TGG + chr2_1:74301359-74301378 Msa0224420:intron 25.0%
!!! CACGTGTGTTTATATTTTTT+GGG + chr2_1:74301360-74301379 Msa0224420:intron 25.0%
!! TTTTGTAAGCTAACAATACA+TGG - chr2_1:74301395-74301414 None:intergenic 25.0%
!!! ATTAGAAGTGTTTGTACTAA+TGG - chr2_1:74301522-74301541 None:intergenic 25.0%
! ATTAGTACAAACACTTCTAA+TGG + chr2_1:74301521-74301540 Msa0224420:intron 25.0%
! CCATTTCAATTTACCTAAAA+GGG - chr2_1:74301708-74301727 None:intergenic 25.0%
!!! CCTTTTAGGTAAATTGAAAT+GGG + chr2_1:74301706-74301725 Msa0224420:intron 25.0%
! TGTATAACTTCATTCTTCAA+CGG - chr2_1:74302084-74302103 None:intergenic 25.0%
!!! TTTGTTTTATAGAACTATGG+TGG + chr2_1:74302367-74302386 Msa0224420:intron 25.0%
! ATCTTTCAGACAATTATGAA+GGG - chr2_1:74302739-74302758 None:intergenic 25.0%
! AATCACATAATACACAAAAG+TGG + chr2_1:74302781-74302800 Msa0224420:intron 25.0%
!!! GGCAGTTTTTTTAGAATTTA+AGG + chr2_1:74302802-74302821 Msa0224420:intron 25.0%
!!! AGAATTTTAGTATTCATCGA+GGG + chr2_1:74302928-74302947 Msa0224420:intron 25.0%
! ATGAAGCAAACGTTAAAAAA+GGG - chr2_1:74303211-74303230 None:intergenic 25.0%
! AATGAAGCAAACGTTAAAAA+AGG - chr2_1:74303212-74303231 None:intergenic 25.0%
!! CTTCCTTAACACAATAATTT+TGG + chr2_1:74303327-74303346 Msa0224420:intron 25.0%
! GAGATAAAAGACCATTAAAA+TGG - chr2_1:74303580-74303599 None:intergenic 25.0%
!! AATTTTAAACTGGCATATGT+AGG + chr2_1:74303626-74303645 Msa0224420:intron 25.0%
!!! ATTTGTTTTGGGGTAAAATA+TGG + chr2_1:74303804-74303823 Msa0224420:intron 25.0%
!! CAACACAGATTTTTCATTAT+TGG + chr2_1:74303945-74303964 Msa0224420:intron 25.0%
! ATGTTACAAATGGTTATTTG+GGG + chr2_1:74304345-74304364 Msa0224420:intron 25.0%
!! CAATCTTAAATATCTTTTGC+AGG - chr2_1:74304503-74304522 None:intergenic 25.0%
!! CTGCAAAAGATATTTAAGAT+TGG + chr2_1:74304501-74304520 Msa0224420:intron 25.0%
! AAAAACTTTGCACAGAAATA+CGG - chr2_1:74304549-74304568 None:intergenic 25.0%
!! ATTTTCCAATTCAGTTAAGT+TGG + chr2_1:74304695-74304714 Msa0224420:intron 25.0%
!! GCATTCTATTATGTTGATTA+GGG + chr2_1:74304717-74304736 Msa0224420:intron 25.0%
! AAAATTGTTTGGTTAGATTC+CGG + chr2_1:74304826-74304845 Msa0224420:intron 25.0%
! TGATGAAATATCATTGATCA+AGG + chr2_1:74305214-74305233 Msa0224420:intron 25.0%
! AAAGATGACTAATTCTAACT+GGG - chr2_1:74305770-74305789 None:intergenic 25.0%
! TAAAGATGACTAATTCTAAC+TGG - chr2_1:74305771-74305790 None:intergenic 25.0%
! GATTCACTTATTGAAGAATT+TGG + chr2_1:74306262-74306281 Msa0224420:intron 25.0%
! GATTCACTTATTGAAGAATT+TGG + chr2_1:74306262-74306281 Msa0224420:intron 25.0%
!! TAAATCTTGTGAATCTTTTG+AGG + chr2_1:74306611-74306630 Msa0224420:intron 25.0%
! CAAAGTTAGGTAGAAATAAA+TGG - chr2_1:74306893-74306912 None:intergenic 25.0%
! ATTAGTTGAAAATGCAAAAC+CGG + chr2_1:74307031-74307050 Msa0224420:three_prime_UTR 25.0%
!!! TTGGAAATGAAAGCTTTAAA+AGG + chr2_1:74307172-74307191 Msa0224420:three_prime_UTR 25.0%
!!! AATGAAAGCTTTAAAAGGTA+TGG + chr2_1:74307177-74307196 Msa0224420:three_prime_UTR 25.0%
!!! AACATAAAAAGCTTTTAAGG+AGG + chr2_1:74307218-74307237 Msa0224420:three_prime_UTR 25.0%
!!! ACATAAAAAGCTTTTAAGGA+GGG + chr2_1:74307219-74307238 Msa0224420:three_prime_UTR 25.0%
!!! ATAGTCATGTTTTGTTCAAT+TGG + chr2_1:74307308-74307327 Msa0224420:three_prime_UTR 25.0%
!!! TAGTCATGTTTTGTTCAATT+GGG + chr2_1:74307309-74307328 Msa0224420:three_prime_UTR 25.0%
!! CAATCTAAAATTTGGAAATC+AGG - chr2_1:74307449-74307468 None:intergenic 25.0%
! AAAGAAAAAAAGAAAAGGGA+GGG - chr2_1:74307477-74307496 None:intergenic 25.0%
! AAAAGAAAAAAAGAAAAGGG+AGG - chr2_1:74307478-74307497 None:intergenic 25.0%
!!! ATTAGTTTTGTAGTGTACAA+TGG - chr2_1:74307947-74307966 None:intergenic 25.0%
! CTACAAAACTAATTGTATGT+TGG + chr2_1:74307954-74307973 Msa0224420:three_prime_UTR 25.0%
! AAAACTAATTGTATGTTGGT+GGG + chr2_1:74307958-74307977 Msa0224420:three_prime_UTR 25.0%
!! GAGAATTTTGATGAAGAAGA+GGG - chr2_1:74301245-74301264 None:intergenic 30.0%
!! TGAGAATTTTGATGAAGAAG+AGG - chr2_1:74301246-74301265 None:intergenic 30.0%
GTGAATTGTAATTGTTGTGA+TGG + chr2_1:74301670-74301689 Msa0224420:intron 30.0%
!! CCCTTTTAGGTAAATTGAAA+TGG + chr2_1:74301705-74301724 Msa0224420:intron 30.0%
CCCATTTCAATTTACCTAAA+AGG - chr2_1:74301709-74301728 None:intergenic 30.0%
AGTATCAAACAAGAACTTTC+TGG + chr2_1:74302132-74302151 Msa0224420:CDS 30.0%
GTATCAAACAAGAACTTTCT+GGG + chr2_1:74302133-74302152 Msa0224420:CDS 30.0%
! TCTATCTTTAAGCATCCTTT+TGG + chr2_1:74302300-74302319 Msa0224420:intron 30.0%
!! TATGGTGGATTATGAAAAGA+AGG + chr2_1:74302382-74302401 Msa0224420:CDS 30.0%
TTATGAAAAGAAGGCAAACA+TGG + chr2_1:74302391-74302410 Msa0224420:CDS 30.0%
AAGGATGATAAATTCTGCAA+AGG - chr2_1:74302551-74302570 None:intergenic 30.0%
GCTATGCTAGTAAATACATA+TGG - chr2_1:74302586-74302605 None:intergenic 30.0%
CATCTTTCAGACAATTATGA+AGG - chr2_1:74302740-74302759 None:intergenic 30.0%
CTTCATAATTGTCTGAAAGA+TGG + chr2_1:74302738-74302757 Msa0224420:intron 30.0%
ATAATTGTCTGAAAGATGGT+TGG + chr2_1:74302742-74302761 Msa0224420:intron 30.0%
TAATTGTCTGAAAGATGGTT+GGG + chr2_1:74302743-74302762 Msa0224420:intron 30.0%
GAGTTAAGGTGATTAAGAAT+AGG - chr2_1:74302864-74302883 None:intergenic 30.0%
!! CTATGTGATGATTTTGAGAA+CGG + chr2_1:74302904-74302923 Msa0224420:intron 30.0%
!! CAGAATTTTAGTATTCATCG+AGG + chr2_1:74302927-74302946 Msa0224420:intron 30.0%
! ATATCTTTCGATCTTTTGAC+TGG + chr2_1:74302981-74303000 Msa0224420:intron 30.0%
TATAGACACATCATGATGTT+TGG + chr2_1:74303109-74303128 Msa0224420:intron 30.0%
TGAAGCAAACGTTAAAAAAG+GGG - chr2_1:74303210-74303229 None:intergenic 30.0%
! TTGCCTTATGGAACAAATTT+TGG + chr2_1:74303241-74303260 Msa0224420:CDS 30.0%
! CTACCAAAATTTGTTCCATA+AGG - chr2_1:74303247-74303266 None:intergenic 30.0%
GGTCCAAAATTATTGTGTTA+AGG - chr2_1:74303333-74303352 None:intergenic 30.0%
AAGCAAAGTAAATGAAACCT+TGG - chr2_1:74303370-74303389 None:intergenic 30.0%
TGAATCTAAGTGATTGATGT+TGG + chr2_1:74303485-74303504 Msa0224420:exon 30.0%
ATCCTTGACATAAAACACAT+TGG - chr2_1:74304009-74304028 None:intergenic 30.0%
! TAGTGGATATTTGTAACTGT+CGG + chr2_1:74304073-74304092 Msa0224420:intron 30.0%
TAAAGTTTAAATTCCTGCAC+CGG - chr2_1:74304105-74304124 None:intergenic 30.0%
! GTGTGATTTTCTGTTTCAAT+TGG + chr2_1:74304248-74304267 Msa0224420:intron 30.0%
TGAGTGACTTATGTTACAAA+TGG + chr2_1:74304335-74304354 Msa0224420:intron 30.0%
AATGCCAATGTTCATTTCAT+GGG + chr2_1:74304383-74304402 Msa0224420:intron 30.0%
!!! TCAATGATGAGTGGATTTTT+TGG + chr2_1:74304423-74304442 Msa0224420:intron 30.0%
!! GTATTTCTGTGCAAAGTTTT+TGG + chr2_1:74304548-74304567 Msa0224420:intron 30.0%
TGTATTACCTTTGATTGAAG+TGG + chr2_1:74304630-74304649 Msa0224420:intron 30.0%
ATTGTAAGTTGTATCAATGC+AGG + chr2_1:74304665-74304684 Msa0224420:intron 30.0%
TTGTAAGTTGTATCAATGCA+GGG + chr2_1:74304666-74304685 Msa0224420:intron 30.0%
! GGCATTCTATTATGTTGATT+AGG + chr2_1:74304716-74304735 Msa0224420:intron 30.0%
CAAATACTATTTACAGCATC+CGG - chr2_1:74304848-74304867 None:intergenic 30.0%
!! CTCTCTTTGAAGCTTAAAAA+GGG - chr2_1:74305103-74305122 None:intergenic 30.0%
!! TCTCTCTTTGAAGCTTAAAA+AGG - chr2_1:74305104-74305123 None:intergenic 30.0%
GAGAAACTTTATGGACTTTA+TGG - chr2_1:74305174-74305193 None:intergenic 30.0%
!!! CTCATTTTTTATAGTGGTTG+AGG + chr2_1:74305191-74305210 Msa0224420:intron 30.0%
AAAACTTCGCAGAGAAAATA+TGG - chr2_1:74305261-74305280 None:intergenic 30.0%
! TATTTTCTCTGCGAAGTTTT+TGG + chr2_1:74305261-74305280 Msa0224420:intron 30.0%
TCTAAGTTGTAGCAATGTTT+AGG + chr2_1:74305377-74305396 Msa0224420:intron 30.0%
CTAAGTTGTAGCAATGTTTA+GGG + chr2_1:74305378-74305397 Msa0224420:intron 30.0%
GATTGTCGTATTATTGCAAT+TGG - chr2_1:74305416-74305435 None:intergenic 30.0%
CAACTTACGAAATCTTATGA+TGG - chr2_1:74305652-74305671 None:intergenic 30.0%
! TCTAACCTGGTATCTTATTT+CGG - chr2_1:74305794-74305813 None:intergenic 30.0%
AAAGATGACTAATTCTAACC+TGG - chr2_1:74305807-74305826 None:intergenic 30.0%
! TCTAACCTGGTATCTTATTT+CGG - chr2_1:74305794-74305813 None:intergenic 30.0%
AAAGATGACTAATTCTAACC+TGG - chr2_1:74305807-74305826 None:intergenic 30.0%
GATTTAGTTACTAGTGAAAC+AGG + chr2_1:74305865-74305884 Msa0224420:intron 30.0%
! AAACAGGATTTTCAGCATAA+TGG + chr2_1:74305881-74305900 Msa0224420:intron 30.0%
TCTCAAGAATTAAGATCTTC+TGG + chr2_1:74305968-74305987 Msa0224420:intron 30.0%
! AGACTTAATTTTCCTTTCCT+CGG - chr2_1:74306102-74306121 None:intergenic 30.0%
!! ATATGGGATGATTTGATTTG+CGG - chr2_1:74306150-74306169 None:intergenic 30.0%
AATCATCCCATATTGCTAAT+TGG + chr2_1:74306157-74306176 Msa0224420:intron 30.0%
! TATTGAAGAATTTGGAGTTG+TGG + chr2_1:74306306-74306325 Msa0224420:intron 30.0%
!! GATTTTAATGCCCTTCAAAA+AGG - chr2_1:74306338-74306357 None:intergenic 30.0%
!!! TTTTGAAGGGCATTAAAATC+TGG + chr2_1:74306338-74306357 Msa0224420:intron 30.0%
!! TTTGAAGGGCATTAAAATCT+GGG + chr2_1:74306339-74306358 Msa0224420:intron 30.0%
ATGTTAAGAATTCGAATCAG+TGG + chr2_1:74306426-74306445 Msa0224420:intron 30.0%
!!! GAATCTTTTGAGGTTATTAG+TGG + chr2_1:74306621-74306640 Msa0224420:intron 30.0%
AGATGAACACTAGATAAGTA+GGG - chr2_1:74306681-74306700 None:intergenic 30.0%
AAGATGAACACTAGATAAGT+AGG - chr2_1:74306682-74306701 None:intergenic 30.0%
TCTATTATTATGGTTGCAGA+TGG + chr2_1:74306915-74306934 Msa0224420:intron 30.0%
!! TTACTTTTCAGTCCCAAAAA+TGG - chr2_1:74306952-74306971 None:intergenic 30.0%
!!! ATTTTTGGGACTGAAAAGTA+AGG + chr2_1:74306951-74306970 Msa0224420:three_prime_UTR 30.0%
TCAACTAATGAAGAACATCT+CGG - chr2_1:74307020-74307039 None:intergenic 30.0%
TTAGTTGAAAATGCAAAACC+GGG + chr2_1:74307032-74307051 Msa0224420:three_prime_UTR 30.0%
!! GTTTAGTATTTTTATGCCGA+TGG + chr2_1:74307398-74307417 Msa0224420:three_prime_UTR 30.0%
AAGAAAAAAAGAAAAGGGAG+GGG - chr2_1:74307476-74307495 None:intergenic 30.0%
CAAAACACGTTGAAACATTT+CGG - chr2_1:74307596-74307615 None:intergenic 30.0%
!!! GTGTTTTGGAGGTTTTTATA+GGG + chr2_1:74307608-74307627 Msa0224420:three_prime_UTR 30.0%
GAAGTAAAAATTAAGCCACT+AGG + chr2_1:74307878-74307897 Msa0224420:three_prime_UTR 30.0%
AAAATTAAGCCACTAGGATT+TGG + chr2_1:74307884-74307903 Msa0224420:three_prime_UTR 30.0%
CAAAACTAATTGTATGTTGG+TGG + chr2_1:74307957-74307976 Msa0224420:three_prime_UTR 30.0%
AAACTAATTGTATGTTGGTG+GGG + chr2_1:74307959-74307978 Msa0224420:three_prime_UTR 30.0%
! GTCGTGTATATTGATTGACT+CGG + chr2_1:74301197-74301216 Msa0224420:five_prime_UTR 35.0%
CATCGTATGAATTTAGCGAT+TGG + chr2_1:74301973-74301992 Msa0224420:CDS 35.0%
AAACATCTTTCGTAAGTGTC+TGG - chr2_1:74302164-74302183 None:intergenic 35.0%
CACTTACGAAAGATGTTTCT+AGG + chr2_1:74302166-74302185 Msa0224420:CDS 35.0%
TCAATCTCAGATCTCATTGA+AGG - chr2_1:74302216-74302235 None:intergenic 35.0%
! TCAATGAGATCTGAGATTGA+TGG + chr2_1:74302216-74302235 Msa0224420:CDS 35.0%
! TTGTGGATTGATTGCTAACA+CGG + chr2_1:74302268-74302287 Msa0224420:intron 35.0%
! TCTTTAAGCATCCTTTTGGT+TGG + chr2_1:74302304-74302323 Msa0224420:intron 35.0%
!! CTTTAAGCATCCTTTTGGTT+GGG + chr2_1:74302305-74302324 Msa0224420:intron 35.0%
AATTGTCTGAAAGATGGTTG+GGG + chr2_1:74302744-74302763 Msa0224420:intron 35.0%
GGAGTTCATTAGTGATAACA+GGG + chr2_1:74302949-74302968 Msa0224420:intron 35.0%
! TGCTACAGTATCTGCATTTT+TGG - chr2_1:74303055-74303074 None:intergenic 35.0%
!! AACAAATTTTGGTAGTCCAG+AGG + chr2_1:74303252-74303271 Msa0224420:CDS 35.0%
!! ACAAATTTTGGTAGTCCAGA+GGG + chr2_1:74303253-74303272 Msa0224420:CDS 35.0%
! ACCTCGTATTCAATTTTCCA+AGG + chr2_1:74303350-74303369 Msa0224420:intron 35.0%
ACCTTGGAAAATTGAATACG+AGG - chr2_1:74303354-74303373 None:intergenic 35.0%
CAATCACTTAGATTCAACGA+CGG - chr2_1:74303481-74303500 None:intergenic 35.0%
!! TTGATGTTGGTGATGAAGAA+AGG + chr2_1:74303498-74303517 Msa0224420:three_prime_UTR 35.0%
!!! GTGTATGCATGCCATTTTAA+TGG + chr2_1:74303566-74303585 Msa0224420:three_prime_UTR 35.0%
GGGTAAAATATGGTTTCTGT+TGG + chr2_1:74303814-74303833 Msa0224420:intron 35.0%
AATATGGTTTCTGTTGGTCA+CGG + chr2_1:74303820-74303839 Msa0224420:intron 35.0%
TTGTTTAACCAGAGCACAAA+CGG - chr2_1:74303976-74303995 None:intergenic 35.0%
! GTCCAATGTGTTTTATGTCA+AGG + chr2_1:74304004-74304023 Msa0224420:intron 35.0%
!! AAGGATTGAGAGTGTGATTT+TGG + chr2_1:74304023-74304042 Msa0224420:intron 35.0%
ATCTCATATCTCTCATGTAG+TGG + chr2_1:74304056-74304075 Msa0224420:intron 35.0%
TTTGCAACTATGTGTACGAT+TGG + chr2_1:74304197-74304216 Msa0224420:intron 35.0%
CTGTTTCAATTGGCAATATG+TGG + chr2_1:74304258-74304277 Msa0224420:intron 35.0%
! AAATGGTTATTTGGGGTGTA+TGG + chr2_1:74304352-74304371 Msa0224420:intron 35.0%
GAATGCCAATGTTCATTTCA+TGG + chr2_1:74304382-74304401 Msa0224420:intron 35.0%
!! TTTCTGTGCAAAGTTTTTGG+TGG + chr2_1:74304551-74304570 Msa0224420:intron 35.0%
AACTAACAACTGATGTTTGC+TGG + chr2_1:74304585-74304604 Msa0224420:intron 35.0%
GAATGCCAACTTAACTGAAT+TGG - chr2_1:74304703-74304722 None:intergenic 35.0%
TTAATAGCAAGACAACACAG+TGG - chr2_1:74304800-74304819 None:intergenic 35.0%
TAGACTTCGGATGTTGTAAT+TGG + chr2_1:74304895-74304914 Msa0224420:intron 35.0%
TGCTTTACTGAGATTGAAGT+CGG + chr2_1:74304922-74304941 Msa0224420:intron 35.0%
TCTTTAGATTGGGCAATTTC+TGG - chr2_1:74305001-74305020 None:intergenic 35.0%
CTATTGTTATACAGATCGGT+AGG - chr2_1:74305047-74305066 None:intergenic 35.0%
AACAATAGTATTTAAGGGGG+TGG + chr2_1:74305059-74305078 Msa0224420:intron 35.0%
ACAATAGTATTTAAGGGGGT+GGG + chr2_1:74305060-74305079 Msa0224420:intron 35.0%
TGGACAATCTTGAGTCATAA+AGG - chr2_1:74305241-74305260 None:intergenic 35.0%
CTTTGCTCTTCTATGTTAGA+AGG + chr2_1:74305505-74305524 Msa0224420:intron 35.0%
!! ACTGGTCTTCAAATATTCCA+CGG - chr2_1:74305544-74305563 None:intergenic 35.0%
ATAAGATTCAGATCAGCAAC+TGG - chr2_1:74305562-74305581 None:intergenic 35.0%
GTTGCTGATCTGAATCTTAT+AGG + chr2_1:74305562-74305581 Msa0224420:intron 35.0%
GGTAAATAGCAAGTTCTACA+TGG - chr2_1:74305619-74305638 None:intergenic 35.0%
TCTTATGATGGTAATCAGCA+AGG - chr2_1:74305640-74305659 None:intergenic 35.0%
TAATTGTTGCACACCTGAAT+AGG + chr2_1:74305678-74305697 Msa0224420:intron 35.0%
TCTAACCTAGTATCCTATTC+AGG - chr2_1:74305694-74305713 None:intergenic 35.0%
GAAACTAATTATTGCACACC+TGG + chr2_1:74305735-74305754 Msa0224420:intron 35.0%
AATTATTGCACACCTGGAAT+AGG + chr2_1:74305741-74305760 Msa0224420:intron 35.0%
CTTTACCGAAATAAGATACC+AGG + chr2_1:74305786-74305805 Msa0224420:intron 35.0%
CTTTACCGAAATAAGATACC+AGG + chr2_1:74305786-74305805 Msa0224420:intron 35.0%
AAAATGATTCGACGGATACT+TGG + chr2_1:74305995-74306014 Msa0224420:intron 35.0%
ATTTGTGTACGCAACAAAAC+TGG + chr2_1:74306124-74306143 Msa0224420:intron 35.0%
CTGGAACCAATTAGCAATAT+GGG - chr2_1:74306166-74306185 None:intergenic 35.0%
! TCTGGAACCAATTAGCAATA+TGG - chr2_1:74306167-74306186 None:intergenic 35.0%
TGCATCATATTATCCAGTGT+TGG + chr2_1:74306239-74306258 Msa0224420:intron 35.0%
GCATCATATTATCCAGTGTT+GGG + chr2_1:74306240-74306259 Msa0224420:intron 35.0%
! AAGAATTTGGAATCCAGTCT+TGG + chr2_1:74306275-74306294 Msa0224420:intron 35.0%
! AGAATTTGGAATCCAGTCTT+GGG + chr2_1:74306276-74306295 Msa0224420:intron 35.0%
! TGTGGAAACTACCTTTTTGA+AGG + chr2_1:74306324-74306343 Msa0224420:intron 35.0%
! GTGGAAACTACCTTTTTGAA+GGG + chr2_1:74306325-74306344 Msa0224420:intron 35.0%
!! TTGAAGGGCATTAAAATCTG+GGG + chr2_1:74306340-74306359 Msa0224420:intron 35.0%
!! GCTTAGAGGCTAGTTTATTT+AGG + chr2_1:74306363-74306382 Msa0224420:intron 35.0%
TCTTGGAGTAAACTTGGTTA+TGG + chr2_1:74306451-74306470 Msa0224420:intron 35.0%
CTTGGAGTAAACTTGGTTAT+GGG + chr2_1:74306452-74306471 Msa0224420:intron 35.0%
ACTTGGTTATGGGATTATAG+TGG + chr2_1:74306462-74306481 Msa0224420:intron 35.0%
TTTCCAGCTAGATTGGAAAT+TGG + chr2_1:74306549-74306568 Msa0224420:intron 35.0%
TTTCCAATTTCCAATCTAGC+TGG - chr2_1:74306555-74306574 None:intergenic 35.0%
GCTAGATTGGAAATTGGAAA+TGG + chr2_1:74306555-74306574 Msa0224420:intron 35.0%
!! AGGTTATTAGTGGACTTCAT+GGG + chr2_1:74306631-74306650 Msa0224420:intron 35.0%
AATCACTTGAATATGCAGAG+CGG - chr2_1:74306868-74306887 None:intergenic 35.0%
AAACCGGGTGAAATGTATTA+TGG + chr2_1:74307047-74307066 Msa0224420:three_prime_UTR 35.0%
AACCGGGTGAAATGTATTAT+GGG + chr2_1:74307048-74307067 Msa0224420:three_prime_UTR 35.0%
! TGAAATGTATTATGGGCTGA+GGG + chr2_1:74307055-74307074 Msa0224420:three_prime_UTR 35.0%
! GGATATATTTTACCCTGTGA+TGG + chr2_1:74307092-74307111 Msa0224420:three_prime_UTR 35.0%
TGTTATCTTGATCCATCACA+GGG - chr2_1:74307107-74307126 None:intergenic 35.0%
TATCAAAACACAACAAAGGC+AGG - chr2_1:74307138-74307157 None:intergenic 35.0%
!!! TGATATTTTAGCCGTGAGAT+TGG + chr2_1:74307153-74307172 Msa0224420:three_prime_UTR 35.0%
AGCTTTCATTTCCAATCTCA+CGG - chr2_1:74307167-74307186 None:intergenic 35.0%
!! GAAAGCTTTAAAAGGTATGG+TGG + chr2_1:74307180-74307199 Msa0224420:three_prime_UTR 35.0%
! CAAGCTGAAAGTATATGGTA+AGG - chr2_1:74307350-74307369 None:intergenic 35.0%
CTTACCATATACTTTCAGCT+TGG + chr2_1:74307348-74307367 Msa0224420:three_prime_UTR 35.0%
! TCAACCAAGCTGAAAGTATA+TGG - chr2_1:74307355-74307374 None:intergenic 35.0%
TGATGAAAGAGTTTATCAGC+AGG + chr2_1:74307372-74307391 Msa0224420:three_prime_UTR 35.0%
GATGAAAGAGTTTATCAGCA+GGG + chr2_1:74307373-74307392 Msa0224420:three_prime_UTR 35.0%
ACCAAGCACAATTAAACCAT+CGG - chr2_1:74307417-74307436 None:intergenic 35.0%
AGAAAAAAAGAAAAGGGAGG+GGG - chr2_1:74307475-74307494 None:intergenic 35.0%
GCATTTGACATTTGAGTAGA+TGG + chr2_1:74307516-74307535 Msa0224420:three_prime_UTR 35.0%
! CGAAATGTTTCAACGTGTTT+TGG + chr2_1:74307594-74307613 Msa0224420:three_prime_UTR 35.0%
!! AATGTTTCAACGTGTTTTGG+AGG + chr2_1:74307597-74307616 Msa0224420:three_prime_UTR 35.0%
!!! CGTGTTTTGGAGGTTTTTAT+AGG + chr2_1:74307607-74307626 Msa0224420:three_prime_UTR 35.0%
TTCGGATTATAGAATCCGAA+CGG - chr2_1:74307642-74307661 None:intergenic 35.0%
TAGGAAATGTACCTACTGAT+GGG + chr2_1:74307750-74307769 Msa0224420:three_prime_UTR 35.0%
!! AGTTTTGTAGTGTACAATGG+AGG - chr2_1:74307944-74307963 None:intergenic 35.0%
! GTGTTTGTGCTTACCCTTTT+AGG + chr2_1:74301692-74301711 Msa0224420:intron 40.0%
! ACAGGAGGTTGATTGATGAT+CGG + chr2_1:74301908-74301927 Msa0224420:CDS 40.0%
TGAACATGAGATGCATTCGA+GGG + chr2_1:74302008-74302027 Msa0224420:CDS 40.0%
TGAAGTTGGAGTCTGATCTT+AGG + chr2_1:74302049-74302068 Msa0224420:CDS 40.0%
! CAAACAAGAACTTTCTGGGA+AGG + chr2_1:74302137-74302156 Msa0224420:CDS 40.0%
ATGCAGAAATCCCAACCAAA+AGG - chr2_1:74302318-74302337 None:intergenic 40.0%
GCAGTCAATGGAGAAAAACA+TGG + chr2_1:74302430-74302449 Msa0224420:CDS 40.0%
GGAGAAAAACATGGTTTCCA+TGG + chr2_1:74302439-74302458 Msa0224420:CDS 40.0%
ACGAAGTTTCTCAACTTCTC+GGG - chr2_1:74302465-74302484 None:intergenic 40.0%
CACGAAGTTTCTCAACTTCT+CGG - chr2_1:74302466-74302485 None:intergenic 40.0%
TAGCATGGATGGAAGACATT+GGG + chr2_1:74302496-74302515 Msa0224420:CDS 40.0%
CATATGGAGTTAACGACTGA+AGG - chr2_1:74302570-74302589 None:intergenic 40.0%
ATTGTCTGAAAGATGGTTGG+GGG + chr2_1:74302745-74302764 Msa0224420:intron 40.0%
! AGACAAGTTAGAGAAAGCGT+GGG - chr2_1:74302886-74302905 None:intergenic 40.0%
TAGACAAGTTAGAGAAAGCG+TGG - chr2_1:74302887-74302906 None:intergenic 40.0%
GGGAGTTCATTAGTGATAAC+AGG + chr2_1:74302948-74302967 Msa0224420:intron 40.0%
AACGTTTGCTTCATTCATGC+AGG + chr2_1:74303217-74303236 Msa0224420:intron 40.0%
ATTCATGCAGGTTTGCCTTA+TGG + chr2_1:74303229-74303248 Msa0224420:intron 40.0%
!! CAAATTTTGGTAGTCCAGAG+GGG + chr2_1:74303254-74303273 Msa0224420:CDS 40.0%
!! AAATTTTGGTAGTCCAGAGG+GGG + chr2_1:74303255-74303274 Msa0224420:CDS 40.0%
ACACCATATCCATCTGCATA+TGG - chr2_1:74303292-74303311 None:intergenic 40.0%
AGATGGATATGGTGTTCACA+TGG + chr2_1:74303297-74303316 Msa0224420:CDS 40.0%
CTTTGCTTGTGCTTCTGTTT+AGG + chr2_1:74303382-74303401 Msa0224420:intron 40.0%
CAGAGAAAGGTCCTCTTTAT+GGG + chr2_1:74303411-74303430 Msa0224420:CDS 40.0%
AGAGAAAGGTCCTCTTTATG+GGG + chr2_1:74303412-74303431 Msa0224420:CDS 40.0%
ACTTCGCTAACACAGCTAAA+GGG - chr2_1:74303532-74303551 None:intergenic 40.0%
TACTTCGCTAACACAGCTAA+AGG - chr2_1:74303533-74303552 None:intergenic 40.0%
!!! CGTGCTTTACTGTTTTTACC+TGG + chr2_1:74303656-74303675 Msa0224420:intron 40.0%
! ATTGCAGCAATGTTTTCTCC+AGG - chr2_1:74303677-74303696 None:intergenic 40.0%
ATATGGTTTCTGTTGGTCAC+GGG + chr2_1:74303821-74303840 Msa0224420:intron 40.0%
GCTCACATGATTCAACACTT+GGG - chr2_1:74303884-74303903 None:intergenic 40.0%
AGCTCACATGATTCAACACT+TGG - chr2_1:74303885-74303904 None:intergenic 40.0%
AATCATGTGAGCTGAAGTTC+AGG + chr2_1:74303892-74303911 Msa0224420:intron 40.0%
TTGTGCTCTGGTTAAACAAG+TGG + chr2_1:74303977-74303996 Msa0224420:intron 40.0%
AGCTGCTTGCACACATTATT+AGG + chr2_1:74304300-74304319 Msa0224420:intron 40.0%
CATGCCCATGAAATGAACAT+TGG - chr2_1:74304390-74304409 None:intergenic 40.0%
!! TTTGGAAGTGCTTGCTGTTA+TGG + chr2_1:74304441-74304460 Msa0224420:intron 40.0%
! GAAGTTTCCGTACTCACTTT+TGG + chr2_1:74304463-74304482 Msa0224420:intron 40.0%
! GTTGACTCCAAAAGTGAGTA+CGG - chr2_1:74304473-74304492 None:intergenic 40.0%
! TGTCATGCCACTTCAATCAA+AGG - chr2_1:74304640-74304659 None:intergenic 40.0%
AACCACAAGTATGTTGCACA+TGG + chr2_1:74304742-74304761 Msa0224420:intron 40.0%
ATCCATGTGCAACATACTTG+TGG - chr2_1:74304747-74304766 None:intergenic 40.0%
TTTACTGAGATTGAAGTCGG+TGG + chr2_1:74304925-74304944 Msa0224420:intron 40.0%
CAATAGTATTTAAGGGGGTG+GGG + chr2_1:74305061-74305080 Msa0224420:intron 40.0%
!! TTTCTCTGCGAAGTTTTTGG+TGG + chr2_1:74305264-74305283 Msa0224420:intron 40.0%
! TAACTACTGCTGTTTGCTAG+AGG + chr2_1:74305294-74305313 Msa0224420:intron 40.0%
! AACTACTGCTGTTTGCTAGA+GGG + chr2_1:74305295-74305314 Msa0224420:intron 40.0%
!!! GGGATGCATTTGTTTTGAAC+TGG + chr2_1:74305332-74305351 Msa0224420:intron 40.0%
ATCTACCATCACCATACTTG+TGG - chr2_1:74305462-74305481 None:intergenic 40.0%
!! ACAAGTATGGTGATGGTAGA+TGG + chr2_1:74305461-74305480 Msa0224420:intron 40.0%
!! CAAGTATGGTGATGGTAGAT+GGG + chr2_1:74305462-74305481 Msa0224420:intron 40.0%
!! AAGTATGGTGATGGTAGATG+GGG + chr2_1:74305463-74305482 Msa0224420:intron 40.0%
! CTGGTCTTCAAATATTCCAC+GGG - chr2_1:74305543-74305562 None:intergenic 40.0%
! GGATTTTCAGCATAATGGTC+AGG + chr2_1:74305886-74305905 Msa0224420:intron 40.0%
CTGGAGCTAAAATGATTCGA+CGG + chr2_1:74305987-74306006 Msa0224420:intron 40.0%
TTATAGGTCTCAGTCGTTAC+TGG + chr2_1:74306067-74306086 Msa0224420:intron 40.0%
TATAGGTCTCAGTCGTTACT+GGG + chr2_1:74306068-74306087 Msa0224420:intron 40.0%
CAATAAGTGAATCCCAACAC+TGG - chr2_1:74306255-74306274 None:intergenic 40.0%
CAATAAGTGAATCCCAAGAC+TGG - chr2_1:74306291-74306310 None:intergenic 40.0%
!! TGAAGGGCATTAAAATCTGG+GGG + chr2_1:74306341-74306360 Msa0224420:intron 40.0%
ATTAAAATCTGGGGGCTTAG+AGG + chr2_1:74306349-74306368 Msa0224420:intron 40.0%
! AATTCGAATCAGTGGACTCT+TGG + chr2_1:74306434-74306453 Msa0224420:intron 40.0%
TAGTGGAATAGATGAACCAC+CGG + chr2_1:74306479-74306498 Msa0224420:intron 40.0%
!! GAGGTTATTAGTGGACTTCA+TGG + chr2_1:74306630-74306649 Msa0224420:intron 40.0%
!! GGTTATTAGTGGACTTCATG+GGG + chr2_1:74306632-74306651 Msa0224420:intron 40.0%
!! GAGAGCTGGAAACCATTTTT+GGG + chr2_1:74306937-74306956 Msa0224420:three_prime_UTR 40.0%
! CATAATGCTGCGAGATTTTG+CGG + chr2_1:74306990-74307009 Msa0224420:three_prime_UTR 40.0%
AGCCCATAATACATTTCACC+CGG - chr2_1:74307053-74307072 None:intergenic 40.0%
! GTGAAATGTATTATGGGCTG+AGG + chr2_1:74307054-74307073 Msa0224420:three_prime_UTR 40.0%
GTGTTATCTTGATCCATCAC+AGG - chr2_1:74307108-74307127 None:intergenic 40.0%
! AAGTATATGGTAAGGCACCA+AGG - chr2_1:74307342-74307361 None:intergenic 40.0%
! GGGGGTGACAATCTAAAATT+TGG - chr2_1:74307457-74307476 None:intergenic 40.0%
AAATGCACAAGCCCAACTAA+AGG - chr2_1:74307502-74307521 None:intergenic 40.0%
AGTTTCTTGCACGCTCTATT+TGG + chr2_1:74307560-74307579 Msa0224420:three_prime_UTR 40.0%
TATAGGGTATGTATGCCGTT+CGG + chr2_1:74307624-74307643 Msa0224420:three_prime_UTR 40.0%
GTAGGAAATGTACCTACTGA+TGG + chr2_1:74307749-74307768 Msa0224420:three_prime_UTR 40.0%
AGGAAATGTACCTACTGATG+GGG + chr2_1:74307751-74307770 Msa0224420:three_prime_UTR 40.0%
GCATACTATCCAAATCCTAG+TGG - chr2_1:74307896-74307915 None:intergenic 40.0%
GGATTTGGATAGTATGCATG+AGG + chr2_1:74307899-74307918 Msa0224420:three_prime_UTR 40.0%
TGAGTTATACGGCGTCGTTT+GGG - chr2_1:74301158-74301177 None:intergenic 45.0%
TTGAGTTATACGGCGTCGTT+TGG - chr2_1:74301159-74301178 None:intergenic 45.0%
! TTGGTGGCTCTCTATGAACA+CGG - chr2_1:74301741-74301760 None:intergenic 45.0%
TCTAACAATGCTGGATGAGG+TGG - chr2_1:74301838-74301857 None:intergenic 45.0%
ACCTCATCCAGCATTGTTAG+AGG + chr2_1:74301837-74301856 Msa0224420:CDS 45.0%
TCCTCTAACAATGCTGGATG+AGG - chr2_1:74301841-74301860 None:intergenic 45.0%
AGCTCTTCCTCTAACAATGC+TGG - chr2_1:74301847-74301866 None:intergenic 45.0%
AAGTGCAGCATGCTGAAATG+AGG + chr2_1:74301869-74301888 Msa0224420:CDS 45.0%
CTGAACATGAGATGCATTCG+AGG + chr2_1:74302007-74302026 Msa0224420:CDS 45.0%
GAAGGCAAACATGGAGTTCA+TGG + chr2_1:74302400-74302419 Msa0224420:CDS 45.0%
ACATGGAGTTCATGGAACAG+AGG + chr2_1:74302408-74302427 Msa0224420:CDS 45.0%
CTAGCATGGATGGAAGACAT+TGG + chr2_1:74302495-74302514 Msa0224420:CDS 45.0%
AGCATGGATGGAAGACATTG+GGG + chr2_1:74302497-74302516 Msa0224420:CDS 45.0%
! TAGAGAAAGCGTGGGAGTTA+AGG - chr2_1:74302878-74302897 None:intergenic 45.0%
!! TCTTTTGACTGGCAGTGTTG+AGG + chr2_1:74302992-74303011 Msa0224420:intron 45.0%
!! CTTTTGACTGGCAGTGTTGA+GGG + chr2_1:74302993-74303012 Msa0224420:intron 45.0%
ATCCCACAAGGTGTATACGT+AGG + chr2_1:74303023-74303042 Msa0224420:intron 45.0%
TCCCACAAGGTGTATACGTA+GGG + chr2_1:74303024-74303043 Msa0224420:intron 45.0%
TCCCTACGTATACACCTTGT+GGG - chr2_1:74303028-74303047 None:intergenic 45.0%
ATCCCTACGTATACACCTTG+TGG - chr2_1:74303029-74303048 None:intergenic 45.0%
!! AATTTTGGTAGTCCAGAGGG+GGG + chr2_1:74303256-74303275 Msa0224420:CDS 45.0%
ATCCATCTGCATATGGAGGT+GGG - chr2_1:74303285-74303304 None:intergenic 45.0%
TATCCATCTGCATATGGAGG+TGG - chr2_1:74303286-74303305 None:intergenic 45.0%
CCATATCCATCTGCATATGG+AGG - chr2_1:74303289-74303308 None:intergenic 45.0%
CCTCCATATGCAGATGGATA+TGG + chr2_1:74303286-74303305 Msa0224420:CDS 45.0%
GCAGAGAAAGGTCCTCTTTA+TGG + chr2_1:74303410-74303429 Msa0224420:CDS 45.0%
AAAGGTCCTCTTTATGGGGT+GGG + chr2_1:74303416-74303435 Msa0224420:CDS 45.0%
TAGCTGTGTTAGCGAAGTAG+CGG + chr2_1:74303534-74303553 Msa0224420:three_prime_UTR 45.0%
TTGGGAGCTACAAAACCTCA+AGG - chr2_1:74303866-74303885 None:intergenic 45.0%
TTGTAACTGTCGGAGAAGTC+CGG + chr2_1:74304083-74304102 Msa0224420:intron 45.0%
CGATTGGATAACAATCTCCC+AGG + chr2_1:74304213-74304232 Msa0224420:intron 45.0%
TAACAATCTCCCAGGAATGC+TGG + chr2_1:74304221-74304240 Msa0224420:intron 45.0%
! GCAATATGTGGTCTTGCAAC+TGG + chr2_1:74304270-74304289 Msa0224420:intron 45.0%
TGCAAGCTCTCAATGATGAG+TGG + chr2_1:74304414-74304433 Msa0224420:intron 45.0%
! ACAACTGATGTTTGCTGGCA+TGG + chr2_1:74304590-74304609 Msa0224420:intron 45.0%
ATAGCAAGACAACACAGTGG+AGG - chr2_1:74304797-74304816 None:intergenic 45.0%
TGAGATTGAAGTCGGTGGTA+GGG + chr2_1:74304930-74304949 Msa0224420:intron 45.0%
GGAAACCACAAGTATGGTGA+TGG + chr2_1:74305454-74305473 Msa0224420:intron 45.0%
GCTCTTCTATGTTAGAAGGC+CGG + chr2_1:74305509-74305528 Msa0224420:intron 45.0%
GCACACCTGAATAGGATACT+AGG + chr2_1:74305686-74305705 Msa0224420:intron 45.0%
CTAACTGGGTATCCTATTCC+AGG - chr2_1:74305756-74305775 None:intergenic 45.0%
! GCTAATTGGTTCCAGAGTAC+AGG + chr2_1:74306171-74306190 Msa0224420:intron 45.0%
AACTGAGTGATCCTGTACTC+TGG - chr2_1:74306185-74306204 None:intergenic 45.0%
GTGGACTCTTGGAGTAAACT+TGG + chr2_1:74306445-74306464 Msa0224420:intron 45.0%
! TGCCTAGTATGTGGAGGTTT+TGG + chr2_1:74306504-74306523 Msa0224420:intron 45.0%
! GCCTAGTATGTGGAGGTTTT+GGG + chr2_1:74306505-74306524 Msa0224420:intron 45.0%
! CCTAGTATGTGGAGGTTTTG+GGG + chr2_1:74306506-74306525 Msa0224420:intron 45.0%
AACCTGCTTTCCAGCTAGAT+TGG + chr2_1:74306542-74306561 Msa0224420:intron 45.0%
TTCCAATCTAGCTGGAAAGC+AGG - chr2_1:74306547-74306566 None:intergenic 45.0%
!! TATTAGTGGACTTCATGGGG+TGG + chr2_1:74306635-74306654 Msa0224420:intron 45.0%
GGTGGTGAATGCTAGATGTT+TGG + chr2_1:74306653-74306672 Msa0224420:intron 45.0%
! GGAGAGCTGGAAACCATTTT+TGG + chr2_1:74306936-74306955 Msa0224420:three_prime_UTR 45.0%
CGCAAAATCTCGCAGCATTA+TGG - chr2_1:74306992-74307011 None:intergenic 45.0%
! TTCAATTGGGTTGTCCTCCT+TGG + chr2_1:74307322-74307341 Msa0224420:three_prime_UTR 45.0%
! TATATGGTAAGGCACCAAGG+AGG - chr2_1:74307339-74307358 None:intergenic 45.0%
GAAAGAGTTTATCAGCAGGG+CGG + chr2_1:74307376-74307395 Msa0224420:three_prime_UTR 45.0%
GCCGATGGTTTAATTGTGCT+TGG + chr2_1:74307413-74307432 Msa0224420:three_prime_UTR 45.0%
AGAGCGTGCAAGAAACTCAT+GGG - chr2_1:74307557-74307576 None:intergenic 45.0%
TAGAGCGTGCAAGAAACTCA+TGG - chr2_1:74307558-74307577 None:intergenic 45.0%
GGAAATGTACCTACTGATGG+GGG + chr2_1:74307752-74307771 Msa0224420:three_prime_UTR 45.0%
TCTTCCTACTCGCGTCTAAA+TGG - chr2_1:74307778-74307797 None:intergenic 45.0%
GATAGTATGCATGAGGTCCT+AGG + chr2_1:74307906-74307925 Msa0224420:three_prime_UTR 45.0%
!!! TTTATTTTTCAAATTATTAT+CGG + chr2_1:74301606-74301625 Msa0224420:intron 5.0%
TGTCGTGTTGGATCCTGACA+CGG - chr2_1:74301556-74301575 None:intergenic 50.0%
TACACGTGTCAGTGTCGTGT+TGG - chr2_1:74301568-74301587 None:intergenic 50.0%
CACCAATGAGTTCCCGAAGA+GGG + chr2_1:74301755-74301774 Msa0224420:CDS 50.0%
TACCCTCTTCGGGAACTCAT+TGG - chr2_1:74301760-74301779 None:intergenic 50.0%
!! TTCCCGAAGAGGGTATCCAT+CGG + chr2_1:74301765-74301784 Msa0224420:CDS 50.0%
TTCCGATGGATACCCTCTTC+GGG - chr2_1:74301770-74301789 None:intergenic 50.0%
CTTCCGATGGATACCCTCTT+CGG - chr2_1:74301771-74301790 None:intergenic 50.0%
! ATATGCTGTCGTGGCATTGG+TGG - chr2_1:74301814-74301833 None:intergenic 50.0%
GGAATATGCTGTCGTGGCAT+TGG - chr2_1:74301817-74301836 None:intergenic 50.0%
TGAGGTGGAATATGCTGTCG+TGG - chr2_1:74301823-74301842 None:intergenic 50.0%
TGCAGCATGCTGAAATGAGG+AGG + chr2_1:74301872-74301891 Msa0224420:CDS 50.0%
ACCAAGAACTGATGCGTGCT+AGG + chr2_1:74302244-74302263 Msa0224420:CDS 50.0%
ACCTAGCACGCATCAGTTCT+TGG - chr2_1:74302248-74302267 None:intergenic 50.0%
ACTGATGCGTGCTAGGTTTG+TGG + chr2_1:74302251-74302270 Msa0224420:intron 50.0%
CATGGAACAGAGGCAGTCAA+TGG + chr2_1:74302418-74302437 Msa0224420:CDS 50.0%
TTTCTCAACTTCTCGGGCCA+TGG - chr2_1:74302459-74302478 None:intergenic 50.0%
TTCCCACCTCCATATGCAGA+TGG + chr2_1:74303280-74303299 Msa0224420:CDS 50.0%
GTTTAGGCTGCTGCAGAGAA+AGG + chr2_1:74303398-74303417 Msa0224420:intron 50.0%
GAAAGGTCCTCTTTATGGGG+TGG + chr2_1:74303415-74303434 Msa0224420:CDS 50.0%
ATTCAACGACGGTTTGAGCG+AGG - chr2_1:74303470-74303489 None:intergenic 50.0%
AACACAGCTAAAGGGATGGC+AGG - chr2_1:74303524-74303543 None:intergenic 50.0%
CGCTAACACAGCTAAAGGGA+TGG - chr2_1:74303528-74303547 None:intergenic 50.0%
TACTCAGCATTGCAGCCTTG+AGG + chr2_1:74303848-74303867 Msa0224420:intron 50.0%
CACACATCACCAGCATTCCT+GGG - chr2_1:74304233-74304252 None:intergenic 50.0%
TCACACATCACCAGCATTCC+TGG - chr2_1:74304234-74304253 None:intergenic 50.0%
! TGTGGTCTTGCAACTGGTGA+AGG + chr2_1:74304276-74304295 Msa0224420:intron 50.0%
! ACTGATGTTTGCTGGCATGG+AGG + chr2_1:74304593-74304612 Msa0224420:intron 50.0%
! CTGATGTTTGCTGGCATGGA+GGG + chr2_1:74304594-74304613 Msa0224420:intron 50.0%
CTGAGATTGAAGTCGGTGGT+AGG + chr2_1:74304929-74304948 Msa0224420:intron 50.0%
GAAGTCGGTGGTAGGGATAT+AGG + chr2_1:74304937-74304956 Msa0224420:intron 50.0%
TGTCTGGACTCTGGTGGTAT+TGG + chr2_1:74305138-74305157 Msa0224420:intron 50.0%
! TACTGCTGTTTGCTAGAGGG+TGG + chr2_1:74305298-74305317 Msa0224420:intron 50.0%
TAGAGGGTGGCTGTTGTTAG+TGG + chr2_1:74305311-74305330 Msa0224420:intron 50.0%
AGAGGGTGGCTGTTGTTAGT+GGG + chr2_1:74305312-74305331 Msa0224420:intron 50.0%
GGATGGGGAAACCACAAGTA+TGG + chr2_1:74305448-74305467 Msa0224420:intron 50.0%
TTCAAATATTCCACGGGCCC+AGG - chr2_1:74305537-74305556 None:intergenic 50.0%
ATTCGACGGATACTTGGAGC+TGG + chr2_1:74306001-74306020 Msa0224420:intron 50.0%
TGGAGCTGGCTGAAGTTGTA+TGG + chr2_1:74306015-74306034 Msa0224420:intron 50.0%
AGCTGGCTGAAGTTGTATGG+TGG + chr2_1:74306018-74306037 Msa0224420:intron 50.0%
GTTACTGGGCTTCTAATCCG+AGG + chr2_1:74306082-74306101 Msa0224420:intron 50.0%
TGGGCTTCTAATCCGAGGAA+AGG + chr2_1:74306087-74306106 Msa0224420:intron 50.0%
CCTCCACATACTAGGCAAAC+CGG - chr2_1:74306501-74306520 None:intergenic 50.0%
CCCCAAAACCTCCACATACT+AGG - chr2_1:74306509-74306528 None:intergenic 50.0%
TATGGTTGCAGATGGAGAGC+TGG + chr2_1:74306923-74306942 Msa0224420:intron 50.0%
TCGCAGCATTATGGTGTGTG+GGG - chr2_1:74306983-74307002 None:intergenic 50.0%
CTCGCAGCATTATGGTGTGT+GGG - chr2_1:74306984-74307003 None:intergenic 50.0%
TCTCGCAGCATTATGGTGTG+TGG - chr2_1:74306985-74307004 None:intergenic 50.0%
! ATTATGGGCTGAGGGCAAGT+AGG + chr2_1:74307063-74307082 Msa0224420:three_prime_UTR 50.0%
! TTATGGGCTGAGGGCAAGTA+GGG + chr2_1:74307064-74307083 Msa0224420:three_prime_UTR 50.0%
GTGCAAGAAACTCATGGGGT+GGG - chr2_1:74307552-74307571 None:intergenic 50.0%
GAGCGTGCAAGAAACTCATG+GGG - chr2_1:74307556-74307575 None:intergenic 50.0%
TCCGAACTTCATAGAGCGTG+CGG + chr2_1:74307656-74307675 Msa0224420:three_prime_UTR 50.0%
TCTAAATGGCCCCCATCAGT+AGG - chr2_1:74307764-74307783 None:intergenic 50.0%
GGAGGTAACGACTTCAACCT+AGG - chr2_1:74307926-74307945 None:intergenic 50.0%
AAGAAGAGGGTCGCGTACGA+TGG - chr2_1:74301232-74301251 None:intergenic 55.0%
ATGGAAGACGTGTCCGTGTC+AGG + chr2_1:74301540-74301559 Msa0224420:intron 55.0%
CCTCTTCGGGAACTCATTGG+TGG - chr2_1:74301757-74301776 None:intergenic 55.0%
CCACCAATGAGTTCCCGAAG+AGG + chr2_1:74301754-74301773 Msa0224420:CDS 55.0%
!! CGAAGAGGGTATCCATCGGA+AGG + chr2_1:74301769-74301788 Msa0224420:CDS 55.0%
CGAGCATAAGGACCTTCCGA+TGG - chr2_1:74301784-74301803 None:intergenic 55.0%
TCGGAAGGTCCTTATGCTCG+CGG + chr2_1:74301784-74301803 Msa0224420:CDS 55.0%
GCATGCTGAAATGAGGAGGC+TGG + chr2_1:74301876-74301895 Msa0224420:CDS 55.0%
TGCTGAAATGAGGAGGCTGG+TGG + chr2_1:74301879-74301898 Msa0224420:CDS 55.0%
TGAAATGAGGAGGCTGGTGG+CGG + chr2_1:74301882-74301901 Msa0224420:CDS 55.0%
!! TCGTGCTGAGCTTGCTAGCA+TGG + chr2_1:74302481-74302500 Msa0224420:CDS 55.0%
!! GCTGAGCTTGCTAGCATGGA+TGG + chr2_1:74302485-74302504 Msa0224420:CDS 55.0%
GATGGAAGACATTGGGGAGC+TGG + chr2_1:74302503-74302522 Msa0224420:CDS 55.0%
! TTGACTGGCAGTGTTGAGGG+TGG + chr2_1:74302996-74303015 Msa0224420:intron 55.0%
GCAGTACCCACCCCATAAAG+AGG - chr2_1:74303425-74303444 None:intergenic 55.0%
! ATGGGGTGGGTACTGCTTCT+AGG + chr2_1:74303429-74303448 Msa0224420:CDS 55.0%
!! TGGTGTTGCCGTTTGTGCTC+TGG + chr2_1:74303965-74303984 Msa0224420:intron 55.0%
! ATGTTTGCTGGCATGGAGGG+TGG + chr2_1:74304597-74304616 Msa0224420:intron 55.0%
TATGTTAGAAGGCCGGTGCC+TGG + chr2_1:74305516-74305535 Msa0224420:intron 55.0%
ATGTTAGAAGGCCGGTGCCT+GGG + chr2_1:74305517-74305536 Msa0224420:intron 55.0%
CCACATACTAGGCAAACCGG+TGG - chr2_1:74306498-74306517 None:intergenic 55.0%
!! CCACCGGTTTGCCTAGTATG+TGG + chr2_1:74306495-74306514 Msa0224420:intron 55.0%
! CCGGTTTGCCTAGTATGTGG+AGG + chr2_1:74306498-74306517 Msa0224420:intron 55.0%
CGTGCAAGAAACTCATGGGG+TGG - chr2_1:74307553-74307572 None:intergenic 55.0%
CCCGCACGCTCTATGAAGTT+CGG - chr2_1:74307660-74307679 None:intergenic 55.0%
CCGAACTTCATAGAGCGTGC+GGG + chr2_1:74307657-74307676 Msa0224420:three_prime_UTR 55.0%
CGAACTTCATAGAGCGTGCG+GGG + chr2_1:74307658-74307677 Msa0224420:three_prime_UTR 55.0%
AGCGTGCGGGGAAACTCATA+GGG + chr2_1:74307670-74307689 Msa0224420:three_prime_UTR 55.0%
CGGAAGGTCCTTATGCTCGC+GGG + chr2_1:74301785-74301804 Msa0224420:CDS 60.0%
!! TGCTGTCGTGGCATTGGTGG+TGG - chr2_1:74301811-74301830 None:intergenic 60.0%
AGACCTTGCAGCTGCGAAGG+AGG + chr2_1:74301945-74301964 Msa0224420:CDS 60.0%
! ACTGGCAGTGTTGAGGGTGG+TGG + chr2_1:74302999-74303018 Msa0224420:intron 60.0%
! GAGGGTGGTGGTATCCCACA+AGG + chr2_1:74303011-74303030 Msa0224420:intron 60.0%
CTGAGGGCAAGTAGGGCACA+GGG + chr2_1:74307071-74307090 Msa0224420:three_prime_UTR 60.0%
GAGCGTGCGGGGAAACTCAT+AGG + chr2_1:74307669-74307688 Msa0224420:three_prime_UTR 60.0%
GTGCGGGGAAACTCATAGGG+TGG + chr2_1:74307673-74307692 Msa0224420:three_prime_UTR 60.0%
GGGGCCATTTAGACGCGAGT+AGG + chr2_1:74307771-74307790 Msa0224420:three_prime_UTR 60.0%
!! GGAGGCTGGTGGCGGATAAC+AGG + chr2_1:74301890-74301909 Msa0224420:CDS 65.0%
!! GGCTGGTGGCGGATAACAGG+AGG + chr2_1:74301893-74301912 Msa0224420:CDS 65.0%
GCGAGACCTTGCAGCTGCGA+AGG + chr2_1:74301942-74301961 Msa0224420:CDS 65.0%
GCTCCTCCTTCGCAGCTGCA+AGG - chr2_1:74301951-74301970 None:intergenic 65.0%
CTGTCGGAGAAGTCCGGTGC+AGG + chr2_1:74304089-74304108 Msa0224420:intron 65.0%
TTGCTGGCATGGAGGGTGGC+TGG + chr2_1:74304601-74304620 Msa0224420:intron 65.0%
TATTCCACGGGCCCAGGCAC+CGG - chr2_1:74305531-74305550 None:intergenic 65.0%
GCTGAGGGCAAGTAGGGCAC+AGG + chr2_1:74307070-74307089 Msa0224420:three_prime_UTR 65.0%
! GGTGGTGGCCCGCGAGCATA+AGG - chr2_1:74301796-74301815 None:intergenic 70.0%
GGAGGTGGGAAACCCCCCTC+TGG - chr2_1:74303271-74303290 None:intergenic 70.0%
! AAGGCCGGTGCCTGGGCCCG+TGG + chr2_1:74305524-74305543 Msa0224420:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 74301137 74308001 74301137 ID=Msa0224420;Name=Msa0224420
chr2_1 mRNA 74301137 74308001 74301137 ID=Msa0224420-mRNA-1;Parent=Msa0224420;Name=Msa0224420-mRNA-1;_AED=0.04;_eAED=0.04;_QI=182|1|1|1|0.6|0.5|6|1168|283
chr2_1 exon 74301137 74301308 74301137 ID=Msa0224420-mRNA-1:exon:21983;Parent=Msa0224420-mRNA-1
chr2_1 exon 74301714 74302265 74301714 ID=Msa0224420-mRNA-1:exon:21984;Parent=Msa0224420-mRNA-1
chr2_1 exon 74302379 74302524 74302379 ID=Msa0224420-mRNA-1:exon:21985;Parent=Msa0224420-mRNA-1
chr2_1 exon 74303239 74303318 74303239 ID=Msa0224420-mRNA-1:exon:21986;Parent=Msa0224420-mRNA-1
chr2_1 exon 74303404 74303587 74303404 ID=Msa0224420-mRNA-1:exon:21987;Parent=Msa0224420-mRNA-1
chr2_1 exon 74306934 74308001 74306934 ID=Msa0224420-mRNA-1:exon:21988;Parent=Msa0224420-mRNA-1
chr2_1 five_prime_UTR 74301137 74301308 74301137 ID=Msa0224420-mRNA-1:five_prime_utr;Parent=Msa0224420-mRNA-1
chr2_1 five_prime_UTR 74301714 74301723 74301714 ID=Msa0224420-mRNA-1:five_prime_utr;Parent=Msa0224420-mRNA-1
chr2_1 CDS 74301724 74302265 74301724 ID=Msa0224420-mRNA-1:cds;Parent=Msa0224420-mRNA-1
chr2_1 CDS 74302379 74302524 74302379 ID=Msa0224420-mRNA-1:cds;Parent=Msa0224420-mRNA-1
chr2_1 CDS 74303239 74303318 74303239 ID=Msa0224420-mRNA-1:cds;Parent=Msa0224420-mRNA-1
chr2_1 CDS 74303404 74303487 74303404 ID=Msa0224420-mRNA-1:cds;Parent=Msa0224420-mRNA-1
chr2_1 three_prime_UTR 74303488 74303587 74303488 ID=Msa0224420-mRNA-1:three_prime_utr;Parent=Msa0224420-mRNA-1
chr2_1 three_prime_UTR 74306934 74308001 74306934 ID=Msa0224420-mRNA-1:three_prime_utr;Parent=Msa0224420-mRNA-1
Gene Sequence

>Msa0224420

ATGGGATCAAGACACCGTGTTCATAGAGAGCCACCAATGAGTTCCCGAAGAGGGTATCCATCGGAAGGTCCTTATGCTCGCGGGCCACCACCAATGCCACGACAGCATATTCCACCTCATCCAGCATTGTTAGAGGAAGAGCTTGAAGTGCAGCATGCTGAAATGAGGAGGCTGGTGGCGGATAACAGGAGGTTGATTGATGATCGGATGACGTTGCAGCGAGACCTTGCAGCTGCGAAGGAGGAGCTTCATCGTATGAATTTAGCGATTGGTGATATTCGTGCTGAACATGAGATGCATTCGAGGGAGCTTGTTGATAAAAATATGAAGTTGGAGTCTGATCTTAGGTCGACTGAGCCGTTGAAGAATGAAGTTATACAACTGCGAGCTGAAGTTCAAAAACTTAGTAGTATCAAACAAGAACTTTCTGGGAAGGTCCAGACACTTACGAAAGATGTTTCTAGGTTACAGTCTGATAATCAACAAATTCCTTCAATGAGATCTGAGATTGATGGTTTGCACCAAGAACTGATGCGTGCTAGAACTATGGTGGATTATGAAAAGAAGGCAAACATGGAGTTCATGGAACAGAGGCAGTCAATGGAGAAAAACATGGTTTCCATGGCCCGAGAAGTTGAGAAACTTCGTGCTGAGCTTGCTAGCATGGATGGAAGACATTGGGGAGCTGGTTTGCCTTATGGAACAAATTTTGGTAGTCCAGAGGGGGGTTTCCCACCTCCATATGCAGATGGATATGGTGTTCACATGGCTGCTGCAGAGAAAGGTCCTCTTTATGGGGTGGGTACTGCTTCTAGGAAAGCACACGAGAAGCCTCGCTCAAACCGTCGTTGA
Protein sequence

>Msa0224420

MGSRHRVHREPPMSSRRGYPSEGPYARGPPPMPRQHIPPHPALLEEELEVQHAEMRRLVADNRRLIDDRMTLQRDLAAAKEELHRMNLAIGDIRAEHEMHSRELVDKNMKLESDLRSTEPLKNEVIQLRAEVQKLSSIKQELSGKVQTLTKDVSRLQSDNQQIPSMRSEIDGLHQELMRARTMVDYEKKANMEFMEQRQSMEKNMVSMAREVEKLRAELASMDGRHWGAGLPYGTNFGSPEGGFPPPYADGYGVHMAAAEKGPLYGVGTASRKAHEKPRSNRR*