Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387290 | XP_013461988.1 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387290 | sp|A7SDW5|EIF3L_NEMVE | 44.208 | 518 | 248 | 10 | 20 | 523 | 35 | 525 | 3.44e-155 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387290 | G7ZWE0 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003030 | Msa0387290 | 0.832832 | 7.546505e-56 | -8.615850e-47 |
| Msa0003330 | Msa0387290 | 0.816202 | 6.243402e-52 | -8.615850e-47 |
| Msa0016440 | Msa0387290 | 0.854680 | 1.047476e-61 | -8.615850e-47 |
| Msa0020870 | Msa0387290 | 0.832205 | 1.079529e-55 | -8.615850e-47 |
| Msa0026270 | Msa0387290 | 0.802960 | 4.376735e-49 | -8.615850e-47 |
| Msa0042510 | Msa0387290 | 0.862908 | 3.630649e-64 | -8.615850e-47 |
| Msa0079560 | Msa0387290 | 0.860076 | 2.658192e-63 | -8.615850e-47 |
| Msa0086160 | Msa0387290 | 0.801086 | 1.062659e-48 | -8.615850e-47 |
| Msa0116600 | Msa0387290 | 0.835233 | 1.890703e-56 | -8.615850e-47 |
| Msa0116690 | Msa0387290 | 0.822647 | 2.117730e-53 | -8.615850e-47 |
| Msa0123290 | Msa0387290 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0127230 | Msa0387290 | 0.857781 | 1.291873e-62 | -8.615850e-47 |
| Msa0132460 | Msa0387290 | 0.813629 | 2.323192e-51 | -8.615850e-47 |
| Msa0146910 | Msa0387290 | 0.833564 | 4.960487e-56 | -8.615850e-47 |
| Msa0182050 | Msa0387290 | 0.819255 | 1.278223e-52 | -8.615850e-47 |
| Msa0182100 | Msa0387290 | 0.847393 | 1.189898e-59 | -8.615850e-47 |
| Msa0188740 | Msa0387290 | 0.848861 | 4.678029e-60 | -8.615850e-47 |
| Msa0192300 | Msa0387290 | 0.844864 | 5.805277e-59 | -8.615850e-47 |
| Msa0233550 | Msa0387290 | 0.842172 | 3.040618e-58 | -8.615850e-47 |
| Msa0371490 | Msa0387290 | 0.834900 | 2.293297e-56 | -8.615850e-47 |
| Msa0373350 | Msa0387290 | 0.801916 | 7.182709e-49 | -8.615850e-47 |
| Msa0376850 | Msa0387290 | 0.814078 | 1.850476e-51 | -8.615850e-47 |
| Msa0382670 | Msa0387290 | 0.861757 | 8.197409e-64 | -8.615850e-47 |
| Msa0387290 | Msa0388520 | 0.838256 | 3.204724e-57 | -8.615850e-47 |
| Msa0387290 | Msa0416470 | 0.839963 | 1.156683e-57 | -8.615850e-47 |
| Msa0387290 | Msa0426820 | 0.818729 | 1.683885e-52 | -8.615850e-47 |
| Msa0387290 | Msa0426940 | 0.817709 | 2.865331e-52 | -8.615850e-47 |
| Msa0387290 | Msa0436830 | -0.811711 | 6.106235e-51 | -8.615850e-47 |
| Msa0387290 | Msa0467740 | 0.805617 | 1.224513e-49 | -8.615850e-47 |
| Msa0387290 | Msa0477670 | 0.925298 | 2.217982e-90 | -8.615850e-47 |
| Msa0387290 | Msa0511760 | 0.867296 | 1.519353e-65 | -8.615850e-47 |
| Msa0387290 | Msa0516830 | 0.814127 | 1.804859e-51 | -8.615850e-47 |
| Msa0387290 | Msa0521730 | 0.841686 | 4.087150e-58 | -8.615850e-47 |
| Msa0387290 | Msa0547920 | 0.803089 | 4.117092e-49 | -8.615850e-47 |
| Msa0387290 | Msa0573550 | 0.819525 | 1.109611e-52 | -8.615850e-47 |
| Msa0387290 | Msa0574780 | 0.828252 | 9.970561e-55 | -8.615850e-47 |
| Msa0387290 | Msa0578010 | 0.837708 | 4.432793e-57 | -8.615850e-47 |
| Msa0387290 | Msa0597240 | 0.814011 | 1.914298e-51 | -8.615850e-47 |
| Msa0387290 | Msa0602900 | 0.819331 | 1.228548e-52 | -8.615850e-47 |
| Msa0387290 | Msa0609120 | 0.806163 | 9.398648e-50 | -8.615850e-47 |
| Msa0387290 | Msa0619230 | 0.837277 | 5.715783e-57 | -8.615850e-47 |
| Msa0387290 | Msa0621190 | 0.896369 | 3.939961e-76 | -8.615850e-47 |
| Msa0387290 | Msa0643960 | 0.813438 | 2.559699e-51 | -8.615850e-47 |
| Msa0387290 | Msa0656450 | 0.875506 | 2.919426e-68 | -8.615850e-47 |
| Msa0387290 | Msa0691760 | 0.840805 | 6.970659e-58 | -8.615850e-47 |
| Msa0387290 | Msa0700370 | 0.881908 | 1.622507e-70 | -8.615850e-47 |
| Msa0387290 | Msa0708630 | 0.815432 | 9.274801e-52 | -8.615850e-47 |
| Msa0387290 | Msa0709380 | 0.857699 | 1.366467e-62 | -8.615850e-47 |
| Msa0387290 | Msa0724530 | 0.803748 | 3.006754e-49 | -8.615850e-47 |
| Msa0387290 | Msa0790450 | 0.809711 | 1.653039e-50 | -8.615850e-47 |
| Msa0387290 | Msa0880050 | 0.842317 | 2.783597e-58 | -8.615850e-47 |
| Msa0387290 | Msa0929700 | 0.816937 | 4.274937e-52 | -8.615850e-47 |
| Msa0387290 | Msa0930360 | 0.884888 | 1.304511e-71 | -8.615850e-47 |
| Msa0387290 | Msa0930790 | 0.858219 | 9.572113e-63 | -8.615850e-47 |
| Msa0387290 | Msa0987570 | 0.842421 | 2.613567e-58 | -8.615850e-47 |
| Msa0387290 | Msa1041830 | 0.859435 | 4.146014e-63 | -8.615850e-47 |
| Msa0387290 | Msa1124980 | 0.857906 | 1.186373e-62 | -8.615850e-47 |
| Msa0387290 | Msa1144630 | 0.874271 | 7.694582e-68 | -8.615850e-47 |
| Msa0387290 | Msa1165700 | 0.838028 | 3.668397e-57 | -8.615850e-47 |
| Msa0387290 | Msa1167360 | 0.847263 | 1.291575e-59 | -8.615850e-47 |
| Msa0387290 | Msa1185870 | 0.816859 | 4.451003e-52 | -8.615850e-47 |
| Msa0387290 | Msa1227350 | 0.818113 | 2.321979e-52 | -8.615850e-47 |
| Msa0387290 | Msa1235950 | 0.841345 | 5.027464e-58 | -8.615850e-47 |
| Msa0387290 | Msa1235980 | 0.850431 | 1.706110e-60 | -8.615850e-47 |
| Msa0387290 | Msa1237040 | 0.813304 | 2.739076e-51 | -8.615850e-47 |
| Msa0387290 | Msa1284800 | 0.836132 | 1.119290e-56 | -8.615850e-47 |
| Msa0387290 | Msa1316100 | 0.817016 | 4.103082e-52 | -8.615850e-47 |
| Msa0387290 | Msa1317390 | 0.854621 | 1.089656e-61 | -8.615850e-47 |
| Msa0387290 | Msa1347610 | 0.819762 | 9.797486e-53 | -8.615850e-47 |
| Msa0387290 | Msa1363930 | 0.872746 | 2.509927e-67 | -8.615850e-47 |
| Msa0387290 | Msa1366540 | 0.824946 | 6.128459e-54 | -8.615850e-47 |
| Msa0387290 | Msa1387750 | 0.892901 | 1.035051e-74 | -8.615850e-47 |
| Msa0387290 | Msa1390760 | 0.838068 | 3.581852e-57 | -8.615850e-47 |
| Msa0387290 | Msa1403520 | 0.857942 | 1.157115e-62 | -8.615850e-47 |
| Msa0387290 | Msa1407550 | 0.846467 | 2.132543e-59 | -8.615850e-47 |
| Msa0387290 | Msa1413570 | 0.872135 | 4.012839e-67 | -8.615850e-47 |
| Msa0387290 | Msa1423050 | 0.840107 | 1.061133e-57 | -8.615850e-47 |
| Msa0387290 | Msa1432310 | 0.818199 | 2.220674e-52 | -8.615850e-47 |
| Msa0387290 | Msa1446510 | 0.815966 | 7.051929e-52 | -8.615850e-47 |
| Msa0387290 | Msa1450560 | 0.812279 | 4.591933e-51 | -8.615850e-47 |
| Msa0387290 | Msa1463510 | 0.951998 | 6.219210e-110 | -8.615850e-47 |
| Msa0387290 | Msa1465700 | 0.845446 | 4.041580e-59 | -8.615850e-47 |
| Msa0387290 | Msa1465890 | 0.881879 | 1.662200e-70 | -8.615850e-47 |
| Msa0239420 | Msa0387290 | 0.806323 | 8.697089e-50 | -8.615850e-47 |
| Msa0270160 | Msa0387290 | 0.836326 | 9.992035e-57 | -8.615850e-47 |
| Msa0274940 | Msa0387290 | 0.815763 | 7.825976e-52 | -8.615850e-47 |
| Msa0301250 | Msa0387290 | 0.848093 | 7.633259e-60 | -8.615850e-47 |
| Msa0313060 | Msa0387290 | 0.824740 | 6.851317e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387290 | MtrunA17_Chr3g0139831 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387290 | AT5G25757.1 | 80.306 | 523 | 86 | 3 | 5 | 526 | 8 | 514 | 0.0 | 869 |
| Msa0387290 | AT5G25754.1 | 80.306 | 523 | 86 | 3 | 5 | 526 | 8 | 514 | 0.0 | 869 |
Find 134 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGAGCCTTCTATGTTAA+TGG | 0.150810 | 3_1:+91188262 | Msa0387290:CDS |
| CTCTTTCAGGTGGTTCTTCA+TGG | 0.182026 | 3_1:+91184780 | Msa0387290:CDS |
| TAATTACTGCAGTCTCTTTC+AGG | 0.198149 | 3_1:+91184767 | Msa0387290:CDS |
| GAATCAATGGCTTTGGGATA+TGG | 0.229252 | 3_1:+91184824 | Msa0387290:CDS |
| AAGTAGATGAACCAACTTTA+AGG | 0.240848 | 3_1:+91188544 | Msa0387290:CDS |
| TTATTGCTGAACGCTGTTAA+TGG | 0.257768 | 3_1:+91189670 | Msa0387290:three_prime_UTR |
| TACTAGAGGCTCTTCAAAAC+TGG | 0.270914 | 3_1:-91187740 | None:intergenic |
| GCCGGCAAAGCAAATTAAAA+AGG | 0.279775 | 3_1:-91189443 | None:intergenic |
| TAGCAATGTCTTGAAAGTTT+TGG | 0.293530 | 3_1:+91185940 | Msa0387290:CDS |
| CGCAGTATCCAAACAGATTA+GGG | 0.294334 | 3_1:-91184381 | None:intergenic |
| TTCATCAACAAGCCTGCTTT+GGG | 0.303001 | 3_1:-91187584 | None:intergenic |
| GGTGTTTACACCATTGTTAT+TGG | 0.316510 | 3_1:+91186061 | Msa0387290:CDS |
| CGCTGAAGGGGTAATAAACT+TGG | 0.322037 | 3_1:-91187716 | None:intergenic |
| CTGAGGGTTCATTGTCTCTT+GGG | 0.323751 | 3_1:+91185986 | Msa0387290:CDS |
| GCTGAGGGTTCATTGTCTCT+TGG | 0.330424 | 3_1:+91185985 | Msa0387290:CDS |
| ATTACCACCATTTACCACTA+TGG | 0.330766 | 3_1:+91186091 | Msa0387290:CDS |
| AGCTTCCGAATCAATGGCTT+TGG | 0.332438 | 3_1:+91184817 | Msa0387290:CDS |
| TTTCATCAACAAGCCTGCTT+TGG | 0.334356 | 3_1:-91187585 | None:intergenic |
| GGAAAGAAGTTTCGTACATT+TGG | 0.342653 | 3_1:-91184575 | None:intergenic |
| GGCAAAACCATAGTGGTAAA+TGG | 0.355256 | 3_1:-91186098 | None:intergenic |
| CCGCAGTATCCAAACAGATT+AGG | 0.356064 | 3_1:-91184382 | None:intergenic |
| GATGTACTTGGCACCCTTAT+CGG | 0.358467 | 3_1:+91189416 | Msa0387290:three_prime_UTR |
| CTTCTTGCGTCAGGTTGTTA+AGG | 0.370724 | 3_1:+91189188 | Msa0387290:CDS |
| AAGCAACAACAGTTGTTATC+AGG | 0.387793 | 3_1:+91188459 | Msa0387290:CDS |
| CCTATCTGACCGTTTCTTCA+AGG | 0.387841 | 3_1:+91184602 | Msa0387290:CDS |
| AATAAAGCCATTAACATAGA+AGG | 0.390415 | 3_1:-91188269 | None:intergenic |
| AGAAACGGTCAGATAGGGTT+TGG | 0.394229 | 3_1:-91184596 | None:intergenic |
| TGAACAAATGTATGCGTTGC+TGG | 0.399391 | 3_1:+91187540 | Msa0387290:CDS |
| TATGTTAATGGCTTTATTTG+AGG | 0.401710 | 3_1:+91188274 | Msa0387290:CDS |
| GTTGTTGCTTTGCTTCATAA+AGG | 0.402516 | 3_1:-91188446 | None:intergenic |
| CCTGACTGACTAATATCAAT+AGG | 0.413043 | 3_1:-91186040 | None:intergenic |
| TTCAATATCTGTTCATATTG+TGG | 0.422018 | 3_1:-91187511 | None:intergenic |
| ACTGGATCGGGAACGAAGTT+GGG | 0.422123 | 3_1:-91184492 | None:intergenic |
| CTTGTACATCTTTAAGTACA+AGG | 0.428339 | 3_1:+91187471 | Msa0387290:CDS |
| TCTCAGTTGCGAGAGAAGTA+TGG | 0.431894 | 3_1:+91187616 | Msa0387290:CDS |
| CCTATTGATATTAGTCAGTC+AGG | 0.436140 | 3_1:+91186040 | Msa0387290:CDS |
| TTGGGGTATTTCAGTATGGT+TGG | 0.437805 | 3_1:+91185959 | Msa0387290:CDS |
| GACTGGATCGGGAACGAAGT+TGG | 0.438328 | 3_1:-91184493 | None:intergenic |
| GAAGTAATCTCCATACCGTT+TGG | 0.439729 | 3_1:-91189169 | None:intergenic |
| GCTTCCGAATCAATGGCTTT+GGG | 0.440244 | 3_1:+91184818 | Msa0387290:CDS |
| TGCAAAACTTGCAAGTTACA+TGG | 0.442232 | 3_1:+91188521 | Msa0387290:CDS |
| GTCTTGTTTGCAGCTTGAAA+AGG | 0.447914 | 3_1:+91189355 | Msa0387290:intron |
| TCTTCAAAACTGGGCGCTGA+AGG | 0.452512 | 3_1:-91187730 | None:intergenic |
| CCTTGAAGAAACGGTCAGAT+AGG | 0.454544 | 3_1:-91184602 | None:intergenic |
| TGGAGATTACTTCTTGCGTC+AGG | 0.454633 | 3_1:+91189179 | Msa0387290:CDS |
| ATGTAGATTAATGATACGGC+TGG | 0.471148 | 3_1:+91189756 | Msa0387290:three_prime_UTR |
| CCCTCATTTGAAAACATAAG+TGG | 0.471292 | 3_1:-91189570 | None:intergenic |
| AAGAAGTTTCGTACATTTGG+TGG | 0.477971 | 3_1:-91184572 | None:intergenic |
| CTCTGAATCTGCTGTGACAA+TGG | 0.481443 | 3_1:+91184425 | Msa0387290:exon |
| AATATACTTTCAAGAAGGTC+CGG | 0.484004 | 3_1:-91188485 | None:intergenic |
| CAGTATGGTTGGTTTGCTGA+GGG | 0.489529 | 3_1:+91185970 | Msa0387290:CDS |
| TCTCTTGAAACAGTTCGATC+AGG | 0.490945 | 3_1:+91184926 | Msa0387290:CDS |
| TGACCTGCGGAGCATAAGAT+TGG | 0.496399 | 3_1:-91186119 | None:intergenic |
| TCAGTATGGTTGGTTTGCTG+AGG | 0.497191 | 3_1:+91185969 | Msa0387290:CDS |
| TGAGCATCACATACTGAGTA+AGG | 0.498577 | 3_1:-91189832 | None:intergenic |
| AAGTCTTGCAACCTTAAAGT+TGG | 0.500427 | 3_1:-91188555 | None:intergenic |
| ATATGCAGCTTCCGAATCAA+TGG | 0.505365 | 3_1:+91184811 | Msa0387290:CDS |
| CTTCAAAACTGGGCGCTGAA+GGG | 0.514443 | 3_1:-91187729 | None:intergenic |
| ACTCATGCTGTTGATAGTGC+TGG | 0.515009 | 3_1:+91188709 | Msa0387290:CDS |
| CGAGATGGACAGTATAAAGC+TGG | 0.519050 | 3_1:+91189385 | Msa0387290:CDS |
| CTCTTGGGTGATTATCACAC+TGG | 0.525249 | 3_1:+91186001 | Msa0387290:CDS |
| GAGAGAGTGAAGGTAGCTTA+CGG | 0.526072 | 3_1:-91184405 | None:intergenic |
| GCTGAAGGGGTAATAAACTT+GGG | 0.527613 | 3_1:-91187715 | None:intergenic |
| TCACACTGGTCTCAAGTGCT+TGG | 0.527814 | 3_1:+91186015 | Msa0387290:CDS |
| ATAGAAATCCACATCAGCAT+TGG | 0.528493 | 3_1:-91188743 | None:intergenic |
| TTGCCAATCTTATGCTCCGC+AGG | 0.528690 | 3_1:+91186116 | Msa0387290:CDS |
| ATATCCCAAAGCCATTGATT+CGG | 0.529948 | 3_1:-91184822 | None:intergenic |
| CTTGAAGAAACGGTCAGATA+GGG | 0.530479 | 3_1:-91184601 | None:intergenic |
| ATGGTGTGTCCTTGAAGAAA+CGG | 0.530687 | 3_1:-91184611 | None:intergenic |
| CATCAACAAGCCTGCTTTGG+GGG | 0.533539 | 3_1:-91187582 | None:intergenic |
| TAATCTCCATACCGTTTGGA+AGG | 0.533943 | 3_1:-91189165 | None:intergenic |
| AGTAATATCCAATGCTGATG+TGG | 0.534293 | 3_1:+91188735 | Msa0387290:CDS |
| CTGGAGTGAGTTGATGTACT+TGG | 0.535340 | 3_1:+91189404 | Msa0387290:exon |
| AACAGTTGTTATCAGGTCTC+CGG | 0.535364 | 3_1:+91188466 | Msa0387290:CDS |
| TCTCTCTGATGTGACGGTAG+AGG | 0.537475 | 3_1:-91184533 | None:intergenic |
| TACTCGAGCAGGAGAAGGAA+GGG | 0.539087 | 3_1:+91185873 | Msa0387290:CDS |
| CGAAGTTGGGATCGTAGCCT+AGG | 0.539968 | 3_1:-91184479 | None:intergenic |
| AAATATGTAGATTAATGATA+CGG | 0.540047 | 3_1:+91189752 | Msa0387290:three_prime_UTR |
| GTATTGAGCGACAGCGTCTA+CGG | 0.542427 | 3_1:-91184640 | None:intergenic |
| TGTTGAATATACTTTCAAGA+AGG | 0.551618 | 3_1:-91188490 | None:intergenic |
| TCTAAACCTTCCAAACGGTA+TGG | 0.552675 | 3_1:+91189159 | Msa0387290:CDS |
| TCGATTCTCTGACGAAGCGT+AGG | 0.552849 | 3_1:-91184735 | None:intergenic |
| TTCAAAACTGGGCGCTGAAG+GGG | 0.556525 | 3_1:-91187728 | None:intergenic |
| CGTAGCCTAGGTCTTGAGCT+TGG | 0.560532 | 3_1:-91184467 | None:intergenic |
| TTCGTCAGAGAATCGATTCG+TGG | 0.564246 | 3_1:+91184742 | Msa0387290:CDS |
| AAATGTGAACAAAATTCTGC+CGG | 0.568648 | 3_1:-91189461 | None:intergenic |
| GTCTTCTCTACCGTGAGATG+TGG | 0.569636 | 3_1:+91184685 | Msa0387290:CDS |
| TCAGATACTCGAGCAGGAGA+AGG | 0.571169 | 3_1:+91185868 | Msa0387290:CDS |
| ACTAGAGGCTCTTCAAAACT+GGG | 0.572995 | 3_1:-91187739 | None:intergenic |
| ATACTCGAGCAGGAGAAGGA+AGG | 0.578832 | 3_1:+91185872 | Msa0387290:CDS |
| CATTCTTCTCTCTGATGTGA+CGG | 0.584120 | 3_1:-91184539 | None:intergenic |
| GCAGGACACAATTCATGTTG+TGG | 0.584900 | 3_1:+91189134 | Msa0387290:intron |
| ACAGCGTCTACGGAGGGCCA+TGG | 0.585469 | 3_1:-91184630 | None:intergenic |
| CGTCTCCAAGCTCAAGACCT+AGG | 0.590090 | 3_1:+91184462 | Msa0387290:CDS |
| ACCTGGTTGTAATTTACTAG+AGG | 0.590170 | 3_1:-91187754 | None:intergenic |
| TAAGATTGGCAAAACCATAG+TGG | 0.590299 | 3_1:-91186105 | None:intergenic |
| AATTATTCAGATACTCGAGC+AGG | 0.592977 | 3_1:+91185862 | Msa0387290:CDS |
| AGAAGGCTCAGAGTCAATAG+AGG | 0.593706 | 3_1:-91188252 | None:intergenic |
| TTACTGCAGTCTCTTTCAGG+TGG | 0.600442 | 3_1:+91184770 | Msa0387290:CDS |
| TGAAAAGGTGATCAACGAGA+TGG | 0.601494 | 3_1:+91189370 | Msa0387290:CDS |
| ATTTGAAAACATAAGTGGGT+GGG | 0.604920 | 3_1:-91189565 | None:intergenic |
| TGGAGTCTAAACCTTCCAAA+CGG | 0.607048 | 3_1:+91189154 | Msa0387290:CDS |
| CATTTGAAAACATAAGTGGG+TGG | 0.614613 | 3_1:-91189566 | None:intergenic |
| TGTAGATTAATGATACGGCT+GGG | 0.616631 | 3_1:+91189757 | Msa0387290:three_prime_UTR |
| CATATTGTGGAGACTTCTGA+TGG | 0.618356 | 3_1:-91187498 | None:intergenic |
| TAGGAGTGAGACGAGCATAG+AGG | 0.619056 | 3_1:-91184716 | None:intergenic |
| CCTCATTTGAAAACATAAGT+GGG | 0.621953 | 3_1:-91189569 | None:intergenic |
| TCGTCAGAGAATCGATTCGT+GGG | 0.622796 | 3_1:+91184743 | Msa0387290:CDS |
| GAGTGAGACGAGCATAGAGG+TGG | 0.627092 | 3_1:-91184713 | None:intergenic |
| ACGGCTGGGCCTTTCAAAAG+CGG | 0.627850 | 3_1:+91189771 | Msa0387290:three_prime_UTR |
| GCCTCTAGTAAATTACAACC+AGG | 0.628196 | 3_1:+91187753 | Msa0387290:CDS |
| GATGGCTATGATTACAATGG+TGG | 0.631082 | 3_1:+91185917 | Msa0387290:CDS |
| TGAGCGACAGCGTCTACGGA+GGG | 0.640297 | 3_1:-91184636 | None:intergenic |
| TAAGCACAAAGGACAGCTAA+CGG | 0.640998 | 3_1:-91189808 | None:intergenic |
| GGTGGCGAAACCACATCTCA+CGG | 0.647100 | 3_1:-91184695 | None:intergenic |
| GAGCAATTCACTGCAAACGA+TGG | 0.649501 | 3_1:+91185899 | Msa0387290:CDS |
| CCTAATCTGTTTGGATACTG+CGG | 0.649911 | 3_1:+91184382 | Msa0387290:five_prime_UTR |
| TCATCAACAAGCCTGCTTTG+GGG | 0.650115 | 3_1:-91187583 | None:intergenic |
| AGTGGTAAATGGTGGTAATG+TGG | 0.651980 | 3_1:-91186087 | None:intergenic |
| AATGCAACGATATGATGATG+AGG | 0.655375 | 3_1:+91187654 | Msa0387290:CDS |
| GCTGGGCCTTTCAAAAGCGG+AGG | 0.656562 | 3_1:+91189774 | Msa0387290:three_prime_UTR |
| AGCAGATTCAGAGAGAGTGA+AGG | 0.660117 | 3_1:-91184415 | None:intergenic |
| CTGAAGGGGTAATAAACTTG+GGG | 0.662460 | 3_1:-91187714 | None:intergenic |
| TTGAGCGACAGCGTCTACGG+AGG | 0.671373 | 3_1:-91184637 | None:intergenic |
| GTTTCTTCAAGGACACACCA+TGG | 0.673800 | 3_1:+91184613 | Msa0387290:CDS |
| AAAACCATAGTGGTAAATGG+TGG | 0.678504 | 3_1:-91186095 | None:intergenic |
| TAGTATTTGGTATTACACGT+AGG | 0.684066 | 3_1:-91189511 | None:intergenic |
| ACAACGCATCAAAAGAAACA+TGG | 0.687118 | 3_1:-91189630 | None:intergenic |
| GGTAGAGAAGACAGAAGACA+TGG | 0.688600 | 3_1:-91184674 | None:intergenic |
| ACGGTAGAGGTGAACAACGA+AGG | 0.689816 | 3_1:-91184520 | None:intergenic |
| CTGAGTAAGGATAAGCACAA+AGG | 0.699303 | 3_1:-91189819 | None:intergenic |
| ACAGCGTTCAGCAATAAACA+AGG | 0.700897 | 3_1:-91189664 | None:intergenic |
| AACGATGGCTATGATTACAA+TGG | 0.723830 | 3_1:+91185914 | Msa0387290:CDS |
| AATGTGGCATCCAATAACAA+TGG | 0.744265 | 3_1:-91186071 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATAAAAAAAATTATTGA+GGG | - | chr3_1:91186756-91186775 | None:intergenic | 10.0% |
| !! | AGAAATAAAAAAAATTATTG+AGG | - | chr3_1:91186757-91186776 | None:intergenic | 10.0% |
| !!! | TTGTTTCATATTTTATAATA+GGG | - | chr3_1:91186916-91186935 | None:intergenic | 10.0% |
| !!! | TCACATTTTAATTTTATTTT+GGG | - | chr3_1:91186939-91186958 | None:intergenic | 10.0% |
| !!! | TTCACATTTTAATTTTATTT+TGG | - | chr3_1:91186940-91186959 | None:intergenic | 10.0% |
| !! | AGTATTTATTTATGTTAAAA+TGG | + | chr3_1:91187126-91187145 | Msa0387290:intron | 10.0% |
| !! | TTATAAATTATTACATTACA+TGG | + | chr3_1:91187388-91187407 | Msa0387290:intron | 10.0% |
| !! | AGTAATTTATATATTAAAAG+GGG | - | chr3_1:91188376-91188395 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATATTTATCCA+AGG | - | chr3_1:91188599-91188618 | None:intergenic | 10.0% |
| !!! | TAAAATTTTTAAATAGTTTC+TGG | + | chr3_1:91188848-91188867 | Msa0387290:intron | 10.0% |
| !!! | AAAATTTTTAAATAGTTTCT+GGG | + | chr3_1:91188849-91188868 | Msa0387290:intron | 10.0% |
| !!! | TTTATTATCTATTTTATCAG+AGG | + | chr3_1:91185021-91185040 | Msa0387290:intron | 15.0% |
| !!! | TTTGAAATATAATTCTACAA+TGG | - | chr3_1:91186545-91186564 | None:intergenic | 15.0% |
| !!! | TAATATGTTTTGAATAAAAG+GGG | - | chr3_1:91186648-91186667 | None:intergenic | 15.0% |
| !!! | CTAATATGTTTTGAATAAAA+GGG | - | chr3_1:91186649-91186668 | None:intergenic | 15.0% |
| !!! | TCTAATATGTTTTGAATAAA+AGG | - | chr3_1:91186650-91186669 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTAACATAAGAG+GGG | - | chr3_1:91186721-91186740 | None:intergenic | 15.0% |
| !!! | GATTTTATTTTAACATAAGA+GGG | - | chr3_1:91186722-91186741 | None:intergenic | 15.0% |
| !!! | AGATTTTATTTTAACATAAG+AGG | - | chr3_1:91186723-91186742 | None:intergenic | 15.0% |
| !!! | GTTGTTTCATATTTTATAAT+AGG | - | chr3_1:91186917-91186936 | None:intergenic | 15.0% |
| !! | TTTAAATAACCATACTTAAT+CGG | - | chr3_1:91186975-91186994 | None:intergenic | 15.0% |
| !!! | AGTATAAATTTTACTTTTCA+AGG | + | chr3_1:91187218-91187237 | Msa0387290:intron | 15.0% |
| !!! | GTATAAATTTTACTTTTCAA+GGG | + | chr3_1:91187219-91187238 | Msa0387290:intron | 15.0% |
| !! | GTAATTTATATATTAAAAGG+GGG | - | chr3_1:91188375-91188394 | None:intergenic | 15.0% |
| !! | AAATATGTAGATTAATGATA+CGG | + | chr3_1:91189752-91189771 | Msa0387290:three_prime_UTR | 15.0% |
| !! | TATATGTTCAAAAACATTAT+TGG | - | chr3_1:91189880-91189899 | None:intergenic | 15.0% |
| !! | TGTTTATGCTAGTATATAAA+GGG | - | chr3_1:91185307-91185326 | None:intergenic | 20.0% |
| !!! | ATAAGCTATTTCTATAACAA+AGG | - | chr3_1:91185536-91185555 | None:intergenic | 20.0% |
| !! | TATAGAAATAGCTTATACTT+AGG | + | chr3_1:91185540-91185559 | Msa0387290:intron | 20.0% |
| !! | AAATAAGGTAAAAACAGTTA+TGG | - | chr3_1:91185626-91185645 | None:intergenic | 20.0% |
| !!! | ATATTTTACATAAGCACTTA+AGG | + | chr3_1:91185732-91185751 | Msa0387290:intron | 20.0% |
| !!! | CTCAAATAAATTAGTTTAGT+TGG | - | chr3_1:91186266-91186285 | None:intergenic | 20.0% |
| !! | CAACTAAACTAATTTATTTG+AGG | + | chr3_1:91186264-91186283 | Msa0387290:intron | 20.0% |
| !!! | ATTTAGGATTCATTAGAAAT+TGG | + | chr3_1:91186484-91186503 | Msa0387290:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | - | chr3_1:91186618-91186637 | None:intergenic | 20.0% |
| !!! | GTGTATATTTTAACATAAGA+GGG | - | chr3_1:91186619-91186638 | None:intergenic | 20.0% |
| !!! | AGTGTATATTTTAACATAAG+AGG | - | chr3_1:91186620-91186639 | None:intergenic | 20.0% |
| !!! | TAGTCCTTATTTACTTATTA+AGG | + | chr3_1:91187158-91187177 | Msa0387290:intron | 20.0% |
| !!! | AGTCCTTATTTACTTATTAA+GGG | + | chr3_1:91187159-91187178 | Msa0387290:intron | 20.0% |
| !! | AATAATTTATAACCCATGAA+GGG | - | chr3_1:91187380-91187399 | None:intergenic | 20.0% |
| !! | TAATAATTTATAACCCATGA+AGG | - | chr3_1:91187381-91187400 | None:intergenic | 20.0% |
| !!! | ACTTCAAATTTGAAATGTTT+GGG | - | chr3_1:91187849-91187868 | None:intergenic | 20.0% |
| !!! | AACTTCAAATTTGAAATGTT+TGG | - | chr3_1:91187850-91187869 | None:intergenic | 20.0% |
| !!! | AATTCAAATTTGAAGCTAAT+TGG | - | chr3_1:91187877-91187896 | None:intergenic | 20.0% |
| !! | CTTGACAAATCTAAATAATA+TGG | - | chr3_1:91189237-91189256 | None:intergenic | 20.0% |
| !!! | ATTCAATATTCCTTTTTTTG+TGG | + | chr3_1:91189600-91189619 | Msa0387290:three_prime_UTR | 20.0% |
| !! | TTATCTATTTTATCAGAGGT+AGG | + | chr3_1:91185025-91185044 | Msa0387290:intron | 25.0% |
| !! | TATCTATTTTATCAGAGGTA+GGG | + | chr3_1:91185026-91185045 | Msa0387290:intron | 25.0% |
| !! | TGGATTGATTTATTTGAGTT+TGG | + | chr3_1:91185055-91185074 | Msa0387290:intron | 25.0% |
| !! | GGATTGATTTATTTGAGTTT+GGG | + | chr3_1:91185056-91185075 | Msa0387290:intron | 25.0% |
| !! | TTTTTGTTCAGTAGAACTTT+TGG | + | chr3_1:91185095-91185114 | Msa0387290:intron | 25.0% |
| !!! | ATTGTTTTTGCAAATGCTAT+AGG | - | chr3_1:91185196-91185215 | None:intergenic | 25.0% |
| ! | GTGTTTATGCTAGTATATAA+AGG | - | chr3_1:91185308-91185327 | None:intergenic | 25.0% |
| !! | AACATAATTAAGACCCTTTT+TGG | - | chr3_1:91185769-91185788 | None:intergenic | 25.0% |
| ! | TGAATTACAATTGAGCATTT+AGG | + | chr3_1:91186468-91186487 | Msa0387290:intron | 25.0% |
| ! | TGTAATTTAAGCATCTTTGA+GGG | - | chr3_1:91186588-91186607 | None:intergenic | 25.0% |
| !!! | TATTTTTCTTTGAAGTGTGT+TGG | - | chr3_1:91186803-91186822 | None:intergenic | 25.0% |
| ! | TCAAAGAAAAATAGCATTGT+AGG | + | chr3_1:91186810-91186829 | Msa0387290:intron | 25.0% |
| ! | TTATTAAAGCCGATTAAGTA+TGG | + | chr3_1:91186963-91186982 | Msa0387290:intron | 25.0% |
| ! | CTTATTTACTTATTAAGGGA+GGG | + | chr3_1:91187163-91187182 | Msa0387290:intron | 25.0% |
| ! | TTATTTACTTATTAAGGGAG+GGG | + | chr3_1:91187164-91187183 | Msa0387290:intron | 25.0% |
| ! | TTGTAATTCAAGCATCTTAT+AGG | + | chr3_1:91187188-91187207 | Msa0387290:intron | 25.0% |
| ! | TGTAATTCAAGCATCTTATA+GGG | + | chr3_1:91187189-91187208 | Msa0387290:intron | 25.0% |
| !!! | TAAATTTTACTTTTCAAGGG+AGG | + | chr3_1:91187222-91187241 | Msa0387290:intron | 25.0% |
| !!! | AAATTTTACTTTTCAAGGGA+GGG | + | chr3_1:91187223-91187242 | Msa0387290:intron | 25.0% |
| ! | AGTGTATATTTCAACATAAG+AGG | + | chr3_1:91187247-91187266 | Msa0387290:intron | 25.0% |
| ! | GTGTATATTTCAACATAAGA+GGG | + | chr3_1:91187248-91187267 | Msa0387290:intron | 25.0% |
| ! | TGTATATTTCAACATAAGAG+GGG | + | chr3_1:91187249-91187268 | Msa0387290:intron | 25.0% |
| ! | TTCAATATCTGTTCATATTG+TGG | - | chr3_1:91187514-91187533 | None:intergenic | 25.0% |
| ! | AAACCAGATTTATTTCAATC+TGG | - | chr3_1:91187981-91188000 | None:intergenic | 25.0% |
| ! | AGATTGAAATAAATCTGGTT+TGG | + | chr3_1:91187980-91187999 | Msa0387290:intron | 25.0% |
| !!! | CTTGTTACCTGATTTTTTAT+GGG | + | chr3_1:91188157-91188176 | Msa0387290:intron | 25.0% |
| !!! | TTGTTACCTGATTTTTTATG+GGG | + | chr3_1:91188158-91188177 | Msa0387290:intron | 25.0% |
| ! | AATAAAGCCATTAACATAGA+AGG | - | chr3_1:91188272-91188291 | None:intergenic | 25.0% |
| !!! | TATGTTAATGGCTTTATTTG+AGG | + | chr3_1:91188274-91188293 | Msa0387290:CDS | 25.0% |
| ! | TGTTGAATATACTTTCAAGA+AGG | - | chr3_1:91188493-91188512 | None:intergenic | 25.0% |
| ! | TAATTAATCTAGCATTTCCT+TGG | + | chr3_1:91188579-91188598 | Msa0387290:intron | 25.0% |
| !! | ATGATGTTTTCATTTATTGC+AGG | + | chr3_1:91189116-91189135 | Msa0387290:intron | 25.0% |
| !!! | AGACAAAAACATTTGACTTT+TGG | + | chr3_1:91189276-91189295 | Msa0387290:intron | 25.0% |
| !! | TTTTGTTCACATTTTGTTGA+AGG | + | chr3_1:91189470-91189489 | Msa0387290:three_prime_UTR | 25.0% |
| !! | TTTGTTCACATTTTGTTGAA+GGG | + | chr3_1:91189471-91189490 | Msa0387290:three_prime_UTR | 25.0% |
| ! | GACAAGCAAAAAATAGTATT+TGG | - | chr3_1:91189527-91189546 | None:intergenic | 25.0% |
| !!! | TTTGCTTGTCTTTTATTTAG+AGG | + | chr3_1:91189537-91189556 | Msa0387290:three_prime_UTR | 25.0% |
| AACAAAAACCCTAATCTGTT+TGG | + | chr3_1:91184373-91184392 | Msa0387290:five_prime_UTR | 30.0% | |
| !! | GAACTTTTGGAAACAACTTA+TGG | + | chr3_1:91185108-91185127 | Msa0387290:intron | 30.0% |
| ! | TAGTATATAAAGGGCTTGTT+TGG | - | chr3_1:91185298-91185317 | None:intergenic | 30.0% |
| TCAAATAAGTCCATTCAAAC+AGG | - | chr3_1:91185346-91185365 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCCAT+TGG | + | chr3_1:91185356-91185375 | Msa0387290:intron | 30.0% | |
| TTGGAAAACTTGTGGAAATA+AGG | - | chr3_1:91185641-91185660 | None:intergenic | 30.0% | |
| ! | TAGCAATGTCTTGAAAGTTT+TGG | + | chr3_1:91185940-91185959 | Msa0387290:CDS | 30.0% |
| ! | AGCAATGTCTTGAAAGTTTT+GGG | + | chr3_1:91185941-91185960 | Msa0387290:CDS | 30.0% |
| ATTTCTATCTCTGTTCTTTC+TGG | + | chr3_1:91186432-91186451 | Msa0387290:intron | 30.0% | |
| TTTCTATCTCTGTTCTTTCT+GGG | + | chr3_1:91186433-91186452 | Msa0387290:intron | 30.0% | |
| AGTAGTTGAGTATCATTTGA+AGG | + | chr3_1:91186509-91186528 | Msa0387290:intron | 30.0% | |
| GTAATTTAAGCATCTTTGAG+GGG | - | chr3_1:91186587-91186606 | None:intergenic | 30.0% | |
| GTGTAATTTAAGCATCTTTG+AGG | - | chr3_1:91186589-91186608 | None:intergenic | 30.0% | |
| !!! | TATTTTAACATAAGAGGGGA+GGG | - | chr3_1:91186614-91186633 | None:intergenic | 30.0% |
| !!! | ATATTTTAACATAAGAGGGG+AGG | - | chr3_1:91186615-91186634 | None:intergenic | 30.0% |
| !! | ATGTTTTGAATAAAAGGGGA+GGG | - | chr3_1:91186644-91186663 | None:intergenic | 30.0% |
| !! | TATGTTTTGAATAAAAGGGG+AGG | - | chr3_1:91186645-91186664 | None:intergenic | 30.0% |
| !!! | TATTTTAACATAAGAGGGGA+GGG | - | chr3_1:91186614-91186633 | None:intergenic | 30.0% |
| !!! | TTATTTTAACATAAGAGGGG+AGG | - | chr3_1:91186718-91186737 | None:intergenic | 30.0% |
| CCTCCCTTAATAAGTAAATA+AGG | - | chr3_1:91187165-91187184 | None:intergenic | 30.0% | |
| ! | CCTTATTTACTTATTAAGGG+AGG | + | chr3_1:91187162-91187181 | Msa0387290:intron | 30.0% |
| TATTTACTTATTAAGGGAGG+GGG | + | chr3_1:91187165-91187184 | Msa0387290:intron | 30.0% | |
| !! | AATTTTACTTTTCAAGGGAG+GGG | + | chr3_1:91187224-91187243 | Msa0387290:intron | 30.0% |
| CTTGTACATCTTTAAGTACA+AGG | + | chr3_1:91187471-91187490 | Msa0387290:CDS | 30.0% | |
| ! | AGTCTAAGATAAGATATACC+TGG | - | chr3_1:91187774-91187793 | None:intergenic | 30.0% |
| CTTCCAGATTGAAATAAATC+TGG | + | chr3_1:91187975-91187994 | Msa0387290:intron | 30.0% | |
| ! | TTCTCTTTATGCAGCTTTTT+GGG | - | chr3_1:91188023-91188042 | None:intergenic | 30.0% |
| ! | TTTCTCTTTATGCAGCTTTT+TGG | - | chr3_1:91188024-91188043 | None:intergenic | 30.0% |
| !!! | GCTTGTTACCTGATTTTTTA+TGG | + | chr3_1:91188156-91188175 | Msa0387290:intron | 30.0% |
| TATGTACCCCATAAAAAATC+AGG | - | chr3_1:91188167-91188186 | None:intergenic | 30.0% | |
| ! | TATATATTAAAAGGGGGCAT+TGG | - | chr3_1:91188369-91188388 | None:intergenic | 30.0% |
| TTAAAGTTATTTGTTTCCCC+AGG | + | chr3_1:91188395-91188414 | Msa0387290:intron | 30.0% | |
| AATATACTTTCAAGAAGGTC+CGG | - | chr3_1:91188488-91188507 | None:intergenic | 30.0% | |
| AAGTAGATGAACCAACTTTA+AGG | + | chr3_1:91188544-91188563 | Msa0387290:CDS | 30.0% | |
| TCTTCAAAGAGAAAAGGATT+AGG | - | chr3_1:91188804-91188823 | None:intergenic | 30.0% | |
| TGAATCTCTTCAAAGAGAAA+AGG | - | chr3_1:91188810-91188829 | None:intergenic | 30.0% | |
| ACAAAATACCTGTGTTTATG+TGG | - | chr3_1:91188875-91188894 | None:intergenic | 30.0% | |
| TATTAATTGTCCTAGCTTGA+AGG | + | chr3_1:91189023-91189042 | Msa0387290:intron | 30.0% | |
| AAATGTGAACAAAATTCTGC+CGG | - | chr3_1:91189464-91189483 | None:intergenic | 30.0% | |
| TAGTATTTGGTATTACACGT+AGG | - | chr3_1:91189514-91189533 | None:intergenic | 30.0% | |
| ATTTGAAAACATAAGTGGGT+GGG | - | chr3_1:91189568-91189587 | None:intergenic | 30.0% | |
| CCTCATTTGAAAACATAAGT+GGG | - | chr3_1:91189572-91189591 | None:intergenic | 30.0% | |
| ! | CCACTTATGTTTTCAAATGA+GGG | + | chr3_1:91189570-91189589 | Msa0387290:three_prime_UTR | 30.0% |
| TGGTATTTGTCCACAAAAAA+AGG | - | chr3_1:91189613-91189632 | None:intergenic | 30.0% | |
| AAGAAGTTTCGTACATTTGG+TGG | - | chr3_1:91184575-91184594 | None:intergenic | 35.0% | |
| GGAAAGAAGTTTCGTACATT+TGG | - | chr3_1:91184578-91184597 | None:intergenic | 35.0% | |
| TAATTACTGCAGTCTCTTTC+AGG | + | chr3_1:91184767-91184786 | Msa0387290:CDS | 35.0% | |
| ! | ATATCCCAAAGCCATTGATT+CGG | - | chr3_1:91184825-91184844 | None:intergenic | 35.0% |
| ! | TATTTGAGTTTGGGTCTGTT+TGG | + | chr3_1:91185065-91185084 | Msa0387290:intron | 35.0% |
| ATAAACACTTACGAGACTCT+GGG | + | chr3_1:91185320-91185339 | Msa0387290:intron | 35.0% | |
| ! | AAACTATCTTGGAGTGCTTA+TGG | - | chr3_1:91185465-91185484 | None:intergenic | 35.0% |
| GCTGTTGTCATAAACTATCT+TGG | - | chr3_1:91185476-91185495 | None:intergenic | 35.0% | |
| TTATACTTAGGCGCTTATCA+TGG | + | chr3_1:91185552-91185571 | Msa0387290:intron | 35.0% | |
| CAGTTATGGAACACATCATA+AGG | - | chr3_1:91185612-91185631 | None:intergenic | 35.0% | |
| !! | GTTGTTTTCATGAGTCAAGT+TGG | - | chr3_1:91185660-91185679 | None:intergenic | 35.0% |
| !! | ATGTTGTCTTTTGCTGTCTT+AGG | + | chr3_1:91185784-91185803 | Msa0387290:intron | 35.0% |
| ! | TCTTAGGCTTGGAATGTTTT+TGG | + | chr3_1:91185800-91185819 | Msa0387290:intron | 35.0% |
| AATTATTCAGATACTCGAGC+AGG | + | chr3_1:91185862-91185881 | Msa0387290:CDS | 35.0% | |
| AACGATGGCTATGATTACAA+TGG | + | chr3_1:91185914-91185933 | Msa0387290:CDS | 35.0% | |
| ! | GCAATGTCTTGAAAGTTTTG+GGG | + | chr3_1:91185942-91185961 | Msa0387290:CDS | 35.0% |
| !!! | AGTTTTGGGGTATTTCAGTA+TGG | + | chr3_1:91185955-91185974 | Msa0387290:CDS | 35.0% |
| CCTGACTGACTAATATCAAT+AGG | - | chr3_1:91186043-91186062 | None:intergenic | 35.0% | |
| CCTATTGATATTAGTCAGTC+AGG | + | chr3_1:91186040-91186059 | Msa0387290:CDS | 35.0% | |
| GGTGTTTACACCATTGTTAT+TGG | + | chr3_1:91186061-91186080 | Msa0387290:CDS | 35.0% | |
| AATGTGGCATCCAATAACAA+TGG | - | chr3_1:91186074-91186093 | None:intergenic | 35.0% | |
| ATTACCACCATTTACCACTA+TGG | + | chr3_1:91186091-91186110 | Msa0387290:CDS | 35.0% | |
| AAAACCATAGTGGTAAATGG+TGG | - | chr3_1:91186098-91186117 | None:intergenic | 35.0% | |
| TAAGATTGGCAAAACCATAG+TGG | - | chr3_1:91186108-91186127 | None:intergenic | 35.0% | |
| TTTGCCTTGTATCACTTGAA+TGG | + | chr3_1:91186291-91186310 | Msa0387290:intron | 35.0% | |
| ATACACTGACAGAATAGAGA+CGG | - | chr3_1:91186317-91186336 | None:intergenic | 35.0% | |
| AGTGTATTGTTTATGTCCAC+AGG | + | chr3_1:91186330-91186349 | Msa0387290:intron | 35.0% | |
| TCCACAGGCTCAAATAATAT+TGG | + | chr3_1:91186345-91186364 | Msa0387290:intron | 35.0% | |
| ACCAATATTATTTGAGCCTG+TGG | - | chr3_1:91186349-91186368 | None:intergenic | 35.0% | |
| TTCTATCTCTGTTCTTTCTG+GGG | + | chr3_1:91186434-91186453 | Msa0387290:intron | 35.0% | |
| TTGAGTATCATTTGAAGGTG+TGG | + | chr3_1:91186514-91186533 | Msa0387290:intron | 35.0% | |
| !! | ATTTTAACATAAGAGGGGAG+GGG | - | chr3_1:91186613-91186632 | None:intergenic | 35.0% |
| GTAATTCAAGCTTCTCTCAA+GGG | - | chr3_1:91186690-91186709 | None:intergenic | 35.0% | |
| TGTAATTCAAGCTTCTCTCA+AGG | - | chr3_1:91186691-91186710 | None:intergenic | 35.0% | |
| !! | ATTTTAACATAAGAGGGGAG+GGG | - | chr3_1:91186613-91186632 | None:intergenic | 35.0% |
| ATTCAAGCATCTTATAGGGA+AGG | + | chr3_1:91187193-91187212 | Msa0387290:intron | 35.0% | |
| TTCAAGCATCTTATAGGGAA+GGG | + | chr3_1:91187194-91187213 | Msa0387290:intron | 35.0% | |
| ATATTTCAACATAAGAGGGG+AGG | + | chr3_1:91187252-91187271 | Msa0387290:intron | 35.0% | |
| TATTTCAACATAAGAGGGGA+GGG | + | chr3_1:91187253-91187272 | Msa0387290:intron | 35.0% | |
| TGTAGTTCAAGCATCTTTGA+GGG | + | chr3_1:91187279-91187298 | Msa0387290:intron | 35.0% | |
| TGTAGAAAAGGCTACATTTC+AGG | - | chr3_1:91187414-91187433 | None:intergenic | 35.0% | |
| ! | AATGCAACGATATGATGATG+AGG | + | chr3_1:91187654-91187673 | Msa0387290:CDS | 35.0% |
| ACCTGGTTGTAATTTACTAG+AGG | - | chr3_1:91187757-91187776 | None:intergenic | 35.0% | |
| TCTAAACAATGACAGCTGAT+GGG | - | chr3_1:91188328-91188347 | None:intergenic | 35.0% | |
| ATCTAAACAATGACAGCTGA+TGG | - | chr3_1:91188329-91188348 | None:intergenic | 35.0% | |
| !! | GTTGTTGCTTTGCTTCATAA+AGG | - | chr3_1:91188449-91188468 | None:intergenic | 35.0% |
| AAGCAACAACAGTTGTTATC+AGG | + | chr3_1:91188459-91188478 | Msa0387290:CDS | 35.0% | |
| !! | GTAACTTGCAAGTTTTGCAA+GGG | - | chr3_1:91188520-91188539 | None:intergenic | 35.0% |
| !! | TGTAACTTGCAAGTTTTGCA+AGG | - | chr3_1:91188521-91188540 | None:intergenic | 35.0% |
| TGCAAAACTTGCAAGTTACA+TGG | + | chr3_1:91188521-91188540 | Msa0387290:CDS | 35.0% | |
| AAGTCTTGCAACCTTAAAGT+TGG | - | chr3_1:91188558-91188577 | None:intergenic | 35.0% | |
| !! | TGCATTTCCATTTTGATGCT+TGG | + | chr3_1:91188655-91188674 | Msa0387290:intron | 35.0% |
| AGTAATATCCAATGCTGATG+TGG | + | chr3_1:91188735-91188754 | Msa0387290:CDS | 35.0% | |
| ATAGAAATCCACATCAGCAT+TGG | - | chr3_1:91188746-91188765 | None:intergenic | 35.0% | |
| AGTTTAAACCTGTGTCTTGA+TGG | + | chr3_1:91188897-91188916 | Msa0387290:intron | 35.0% | |
| CTAAATAATATGGACCGCAA+AGG | - | chr3_1:91189227-91189246 | None:intergenic | 35.0% | |
| CGTAACTAAATGCAAGCAAT+GGG | - | chr3_1:91189304-91189323 | None:intergenic | 35.0% | |
| TCGTAACTAAATGCAAGCAA+TGG | - | chr3_1:91189305-91189324 | None:intergenic | 35.0% | |
| TTAAAAAGGGGAACCGATAA+GGG | - | chr3_1:91189432-91189451 | None:intergenic | 35.0% | |
| ATTAAAAAGGGGAACCGATA+AGG | - | chr3_1:91189433-91189452 | None:intergenic | 35.0% | |
| CGGCAAAGCAAATTAAAAAG+GGG | - | chr3_1:91189444-91189463 | None:intergenic | 35.0% | |
| CCGGCAAAGCAAATTAAAAA+GGG | - | chr3_1:91189445-91189464 | None:intergenic | 35.0% | |
| !!! | CCCTTTTTAATTTGCTTTGC+CGG | + | chr3_1:91189442-91189461 | Msa0387290:three_prime_UTR | 35.0% |
| ! | TTCACATTTTGTTGAAGGGA+AGG | + | chr3_1:91189475-91189494 | Msa0387290:three_prime_UTR | 35.0% |
| CATTTGAAAACATAAGTGGG+TGG | - | chr3_1:91189569-91189588 | None:intergenic | 35.0% | |
| ! | CCCACTTATGTTTTCAAATG+AGG | + | chr3_1:91189569-91189588 | Msa0387290:three_prime_UTR | 35.0% |
| CCCTCATTTGAAAACATAAG+TGG | - | chr3_1:91189573-91189592 | None:intergenic | 35.0% | |
| ACAACGCATCAAAAGAAACA+TGG | - | chr3_1:91189633-91189652 | None:intergenic | 35.0% | |
| TTATTGCTGAACGCTGTTAA+TGG | + | chr3_1:91189670-91189689 | Msa0387290:three_prime_UTR | 35.0% | |
| ATGTAGATTAATGATACGGC+TGG | + | chr3_1:91189756-91189775 | Msa0387290:three_prime_UTR | 35.0% | |
| TGTAGATTAATGATACGGCT+GGG | + | chr3_1:91189757-91189776 | Msa0387290:three_prime_UTR | 35.0% | |
| CGCAGTATCCAAACAGATTA+GGG | - | chr3_1:91184384-91184403 | None:intergenic | 40.0% | |
| CCTAATCTGTTTGGATACTG+CGG | + | chr3_1:91184382-91184401 | Msa0387290:five_prime_UTR | 40.0% | |
| !!! | AACGAAGGTTTTGACTGGAT+CGG | - | chr3_1:91184508-91184527 | None:intergenic | 40.0% |
| !! | TGAACAACGAAGGTTTTGAC+TGG | - | chr3_1:91184513-91184532 | None:intergenic | 40.0% |
| CATTCTTCTCTCTGATGTGA+CGG | - | chr3_1:91184542-91184561 | None:intergenic | 40.0% | |
| CTTGAAGAAACGGTCAGATA+GGG | - | chr3_1:91184604-91184623 | None:intergenic | 40.0% | |
| ATGGTGTGTCCTTGAAGAAA+CGG | - | chr3_1:91184614-91184633 | None:intergenic | 40.0% | |
| ATATGCAGCTTCCGAATCAA+TGG | + | chr3_1:91184811-91184830 | Msa0387290:CDS | 40.0% | |
| !! | GAATCAATGGCTTTGGGATA+TGG | + | chr3_1:91184824-91184843 | Msa0387290:CDS | 40.0% |
| TCTCTTGAAACAGTTCGATC+AGG | + | chr3_1:91184926-91184945 | Msa0387290:CDS | 40.0% | |
| ! | TATCAGAGGTAGGGTTTGTT+TGG | + | chr3_1:91185035-91185054 | Msa0387290:intron | 40.0% |
| CATAAACACTTACGAGACTC+TGG | + | chr3_1:91185319-91185338 | Msa0387290:intron | 40.0% | |
| GTCACAAGTGTTTATGCCAA+TGG | - | chr3_1:91185375-91185394 | None:intergenic | 40.0% | |
| TTGAGAGAACACATGAAGAC+AGG | + | chr3_1:91185400-91185419 | Msa0387290:intron | 40.0% | |
| !! | GAGTCAAGTTGGAAAACTTG+TGG | - | chr3_1:91185649-91185668 | None:intergenic | 40.0% |
| AGGAAGCTGTTCATCCAAAA+AGG | + | chr3_1:91185752-91185771 | Msa0387290:intron | 40.0% | |
| GGAAGCTGTTCATCCAAAAA+GGG | + | chr3_1:91185753-91185772 | Msa0387290:intron | 40.0% | |
| GATGGCTATGATTACAATGG+TGG | + | chr3_1:91185917-91185936 | Msa0387290:CDS | 40.0% | |
| ! | TTGGGGTATTTCAGTATGGT+TGG | + | chr3_1:91185959-91185978 | Msa0387290:CDS | 40.0% |
| ! | AGTGGTAAATGGTGGTAATG+TGG | - | chr3_1:91186090-91186109 | None:intergenic | 40.0% |
| GGCAAAACCATAGTGGTAAA+TGG | - | chr3_1:91186101-91186120 | None:intergenic | 40.0% | |
| GCAAGCAAGCAATTGATTAG+TGG | - | chr3_1:91186151-91186170 | None:intergenic | 40.0% | |
| ATCTTGCACATATCCACACA+TGG | + | chr3_1:91186403-91186422 | Msa0387290:intron | 40.0% | |
| CACATATCCACACATGGAAT+GGG | + | chr3_1:91186409-91186428 | Msa0387290:intron | 40.0% | |
| TAGAAATCCCATTCCATGTG+TGG | - | chr3_1:91186419-91186438 | None:intergenic | 40.0% | |
| !!! | CTGTTCTTTCTGGGGTTTTT+AGG | + | chr3_1:91186442-91186461 | Msa0387290:intron | 40.0% |
| ! | TTTAAGCATCTTTGAGGGGA+GGG | - | chr3_1:91186583-91186602 | None:intergenic | 40.0% |
| ! | ATTTAAGCATCTTTGAGGGG+AGG | - | chr3_1:91186584-91186603 | None:intergenic | 40.0% |
| TCAAGCATCTTATAGGGAAG+GGG | + | chr3_1:91187195-91187214 | Msa0387290:intron | 40.0% | |
| ATTTCAACATAAGAGGGGAG+GGG | + | chr3_1:91187254-91187273 | Msa0387290:intron | 40.0% | |
| GTGTAGTTCAAGCATCTTTG+AGG | + | chr3_1:91187278-91187297 | Msa0387290:intron | 40.0% | |
| GTAGTTCAAGCATCTTTGAG+GGG | + | chr3_1:91187280-91187299 | Msa0387290:intron | 40.0% | |
| TTATGTGTGCTTTCCCTTCA+TGG | + | chr3_1:91187364-91187383 | Msa0387290:intron | 40.0% | |
| TATGTGTGCTTTCCCTTCAT+GGG | + | chr3_1:91187365-91187384 | Msa0387290:intron | 40.0% | |
| ! | TAGCCTTTTCTACAGATACG+TGG | + | chr3_1:91187420-91187439 | Msa0387290:intron | 40.0% |
| CATCCACGTATCTGTAGAAA+AGG | - | chr3_1:91187426-91187445 | None:intergenic | 40.0% | |
| CATATTGTGGAGACTTCTGA+TGG | - | chr3_1:91187501-91187520 | None:intergenic | 40.0% | |
| TGAACAAATGTATGCGTTGC+TGG | + | chr3_1:91187540-91187559 | Msa0387290:CDS | 40.0% | |
| TTCATCAACAAGCCTGCTTT+GGG | - | chr3_1:91187587-91187606 | None:intergenic | 40.0% | |
| TTTCATCAACAAGCCTGCTT+TGG | - | chr3_1:91187588-91187607 | None:intergenic | 40.0% | |
| CTGAAGGGGTAATAAACTTG+GGG | - | chr3_1:91187717-91187736 | None:intergenic | 40.0% | |
| GCTGAAGGGGTAATAAACTT+GGG | - | chr3_1:91187718-91187737 | None:intergenic | 40.0% | |
| ACTAGAGGCTCTTCAAAACT+GGG | - | chr3_1:91187742-91187761 | None:intergenic | 40.0% | |
| TACTAGAGGCTCTTCAAAAC+TGG | - | chr3_1:91187743-91187762 | None:intergenic | 40.0% | |
| GCCTCTAGTAAATTACAACC+AGG | + | chr3_1:91187753-91187772 | Msa0387290:CDS | 40.0% | |
| TTAGACTCCATCTGTGATCT+TGG | + | chr3_1:91187787-91187806 | Msa0387290:intron | 40.0% | |
| CACTCACTCAAAATGCTCTA+TGG | - | chr3_1:91187820-91187839 | None:intergenic | 40.0% | |
| !! | TTATGCAGCTTTTTGGGAGA+TGG | - | chr3_1:91188017-91188036 | None:intergenic | 40.0% |
| CTCTGAGCCTTCTATGTTAA+TGG | + | chr3_1:91188262-91188281 | Msa0387290:CDS | 40.0% | |
| !! | ATTAAAAGGGGGCATTGGAA+AGG | - | chr3_1:91188364-91188383 | None:intergenic | 40.0% |
| TTGAAGTCTATACGCATCCT+GGG | - | chr3_1:91188415-91188434 | None:intergenic | 40.0% | |
| ATTGAAGTCTATACGCATCC+TGG | - | chr3_1:91188416-91188435 | None:intergenic | 40.0% | |
| AACAGTTGTTATCAGGTCTC+CGG | + | chr3_1:91188466-91188485 | Msa0387290:CDS | 40.0% | |
| !! | TTTCCATTTTGATGCTTGGC+AGG | + | chr3_1:91188659-91188678 | Msa0387290:intron | 40.0% |
| AGAGAAAAGGATTAGGCAAG+AGG | - | chr3_1:91188797-91188816 | None:intergenic | 40.0% | |
| TACTGTTACCATCAAGACAC+AGG | - | chr3_1:91188908-91188927 | None:intergenic | 40.0% | |
| ACCATTGTTAACTCGCTTCT+TGG | + | chr3_1:91188989-91189008 | Msa0387290:intron | 40.0% | |
| ACCAAGAAGCGAGTTAACAA+TGG | - | chr3_1:91188993-91189012 | None:intergenic | 40.0% | |
| TGGAGTCTAAACCTTCCAAA+CGG | + | chr3_1:91189154-91189173 | Msa0387290:CDS | 40.0% | |
| TCTAAACCTTCCAAACGGTA+TGG | + | chr3_1:91189159-91189178 | Msa0387290:CDS | 40.0% | |
| TAATCTCCATACCGTTTGGA+AGG | - | chr3_1:91189168-91189187 | None:intergenic | 40.0% | |
| GAAGTAATCTCCATACCGTT+TGG | - | chr3_1:91189172-91189191 | None:intergenic | 40.0% | |
| !! | GTCTTGTTTGCAGCTTGAAA+AGG | + | chr3_1:91189355-91189374 | Msa0387290:intron | 40.0% |
| TGAAAAGGTGATCAACGAGA+TGG | + | chr3_1:91189370-91189389 | Msa0387290:CDS | 40.0% | |
| GCCGGCAAAGCAAATTAAAA+AGG | - | chr3_1:91189446-91189465 | None:intergenic | 40.0% | |
| ACAGCGTTCAGCAATAAACA+AGG | - | chr3_1:91189667-91189686 | None:intergenic | 40.0% | |
| TAAGCACAAAGGACAGCTAA+CGG | - | chr3_1:91189811-91189830 | None:intergenic | 40.0% | |
| CTGAGTAAGGATAAGCACAA+AGG | - | chr3_1:91189822-91189841 | None:intergenic | 40.0% | |
| TGAGCATCACATACTGAGTA+AGG | - | chr3_1:91189835-91189854 | None:intergenic | 40.0% | |
| CCGCAGTATCCAAACAGATT+AGG | - | chr3_1:91184385-91184404 | None:intergenic | 45.0% | |
| GAGAGAGTGAAGGTAGCTTA+CGG | - | chr3_1:91184408-91184427 | None:intergenic | 45.0% | |
| AGCAGATTCAGAGAGAGTGA+AGG | - | chr3_1:91184418-91184437 | None:intergenic | 45.0% | |
| CTCTGAATCTGCTGTGACAA+TGG | + | chr3_1:91184425-91184444 | Msa0387290:exon | 45.0% | |
| !!! | ACGAAGGTTTTGACTGGATC+GGG | - | chr3_1:91184507-91184526 | None:intergenic | 45.0% |
| AGAAACGGTCAGATAGGGTT+TGG | - | chr3_1:91184599-91184618 | None:intergenic | 45.0% | |
| CCTTGAAGAAACGGTCAGAT+AGG | - | chr3_1:91184605-91184624 | None:intergenic | 45.0% | |
| CCTATCTGACCGTTTCTTCA+AGG | + | chr3_1:91184602-91184621 | Msa0387290:CDS | 45.0% | |
| GTTTCTTCAAGGACACACCA+TGG | + | chr3_1:91184613-91184632 | Msa0387290:CDS | 45.0% | |
| GGTAGAGAAGACAGAAGACA+TGG | - | chr3_1:91184677-91184696 | None:intergenic | 45.0% | |
| !! | TTCGTCAGAGAATCGATTCG+TGG | + | chr3_1:91184742-91184761 | Msa0387290:CDS | 45.0% |
| !! | TCGTCAGAGAATCGATTCGT+GGG | + | chr3_1:91184743-91184762 | Msa0387290:CDS | 45.0% |
| TTACTGCAGTCTCTTTCAGG+TGG | + | chr3_1:91184770-91184789 | Msa0387290:CDS | 45.0% | |
| ! | CTCTTTCAGGTGGTTCTTCA+TGG | + | chr3_1:91184780-91184799 | Msa0387290:CDS | 45.0% |
| AGCTTCCGAATCAATGGCTT+TGG | + | chr3_1:91184817-91184836 | Msa0387290:CDS | 45.0% | |
| GCTTCCGAATCAATGGCTTT+GGG | + | chr3_1:91184818-91184837 | Msa0387290:CDS | 45.0% | |
| !! | GTCTTTTGCTGTCTTAGGCT+TGG | + | chr3_1:91185789-91185808 | Msa0387290:intron | 45.0% |
| GAGCAATTCACTGCAAACGA+TGG | + | chr3_1:91185899-91185918 | Msa0387290:CDS | 45.0% | |
| !! | TCAGTATGGTTGGTTTGCTG+AGG | + | chr3_1:91185969-91185988 | Msa0387290:CDS | 45.0% |
| !! | CAGTATGGTTGGTTTGCTGA+GGG | + | chr3_1:91185970-91185989 | Msa0387290:CDS | 45.0% |
| CTGAGGGTTCATTGTCTCTT+GGG | + | chr3_1:91185986-91186005 | Msa0387290:CDS | 45.0% | |
| CTCTTGGGTGATTATCACAC+TGG | + | chr3_1:91186001-91186020 | Msa0387290:CDS | 45.0% | |
| ACGGCCATTCAAGTGATACA+AGG | - | chr3_1:91186298-91186317 | None:intergenic | 45.0% | |
| GCACATATCCACACATGGAA+TGG | + | chr3_1:91186408-91186427 | Msa0387290:intron | 45.0% | |
| ! | TTAAGCATCTTTGAGGGGAG+GGG | - | chr3_1:91186582-91186601 | None:intergenic | 45.0% |
| TTCAAGCTTCTCTCAAGGGA+GGG | - | chr3_1:91186686-91186705 | None:intergenic | 45.0% | |
| ATTCAAGCTTCTCTCAAGGG+AGG | - | chr3_1:91186687-91186706 | None:intergenic | 45.0% | |
| ! | TTCAAGCATCTTTGAGGGGA+GGG | + | chr3_1:91187284-91187303 | Msa0387290:intron | 45.0% |
| TCATCAACAAGCCTGCTTTG+GGG | - | chr3_1:91187586-91187605 | None:intergenic | 45.0% | |
| TCTCAGTTGCGAGAGAAGTA+TGG | + | chr3_1:91187616-91187635 | Msa0387290:CDS | 45.0% | |
| CGCTGAAGGGGTAATAAACT+TGG | - | chr3_1:91187719-91187738 | None:intergenic | 45.0% | |
| TCCATCTGTGATCTTGGTTC+TGG | + | chr3_1:91187793-91187812 | Msa0387290:intron | 45.0% | |
| TCCAGAACCAAGATCACAGA+TGG | - | chr3_1:91187797-91187816 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAACA+AGG | - | chr3_1:91187907-91187926 | None:intergenic | 45.0% | |
| AGAAGGCTCAGAGTCAATAG+AGG | - | chr3_1:91188255-91188274 | None:intergenic | 45.0% | |
| TGAAGTCTATACGCATCCTG+GGG | - | chr3_1:91188414-91188433 | None:intergenic | 45.0% | |
| AGTCCTGCCAAGCATCAAAA+TGG | - | chr3_1:91188665-91188684 | None:intergenic | 45.0% | |
| !! | ACTCATGCTGTTGATAGTGC+TGG | + | chr3_1:91188709-91188728 | Msa0387290:CDS | 45.0% |
| TTTCTGGGCCACATAAACAC+AGG | + | chr3_1:91188864-91188883 | Msa0387290:intron | 45.0% | |
| TGTTAACTCGCTTCTTGGTC+AGG | + | chr3_1:91188994-91189013 | Msa0387290:intron | 45.0% | |
| GCAGGACACAATTCATGTTG+TGG | + | chr3_1:91189134-91189153 | Msa0387290:intron | 45.0% | |
| TGGAGATTACTTCTTGCGTC+AGG | + | chr3_1:91189179-91189198 | Msa0387290:CDS | 45.0% | |
| ! | CTTCTTGCGTCAGGTTGTTA+AGG | + | chr3_1:91189188-91189207 | Msa0387290:CDS | 45.0% |
| ! | TGCGTCAGGTTGTTAAGGTA+TGG | + | chr3_1:91189193-91189212 | Msa0387290:intron | 45.0% |
| CAAGCTGCAAACAAGACAGA+CGG | - | chr3_1:91189352-91189371 | None:intergenic | 45.0% | |
| CGAGATGGACAGTATAAAGC+TGG | + | chr3_1:91189385-91189404 | Msa0387290:CDS | 45.0% | |
| !! | CTGGAGTGAGTTGATGTACT+TGG | + | chr3_1:91189404-91189423 | Msa0387290:exon | 45.0% |
| GATGTACTTGGCACCCTTAT+CGG | + | chr3_1:91189416-91189435 | Msa0387290:three_prime_UTR | 45.0% | |
| !!! | AAGAATTTATATTTTTTAAA+TGG | + | chr3_1:91187076-91187095 | Msa0387290:intron | 5.0% |
| !! | AAGTAATTTATATATTAAAA+GGG | - | chr3_1:91188377-91188396 | None:intergenic | 5.0% |
| !! | TAAGTAATTTATATATTAAA+AGG | - | chr3_1:91188378-91188397 | None:intergenic | 5.0% |
| !! | TTGTTTATTAAATATATATT+TGG | + | chr3_1:91188617-91188636 | Msa0387290:intron | 5.0% |
| ACTGGATCGGGAACGAAGTT+GGG | - | chr3_1:91184495-91184514 | None:intergenic | 50.0% | |
| ACGGTAGAGGTGAACAACGA+AGG | - | chr3_1:91184523-91184542 | None:intergenic | 50.0% | |
| TCTCTCTGATGTGACGGTAG+AGG | - | chr3_1:91184536-91184555 | None:intergenic | 50.0% | |
| GTATTGAGCGACAGCGTCTA+CGG | - | chr3_1:91184643-91184662 | None:intergenic | 50.0% | |
| GTCTTCTCTACCGTGAGATG+TGG | + | chr3_1:91184685-91184704 | Msa0387290:CDS | 50.0% | |
| TAGGAGTGAGACGAGCATAG+AGG | - | chr3_1:91184719-91184738 | None:intergenic | 50.0% | |
| TCGATTCTCTGACGAAGCGT+AGG | - | chr3_1:91184738-91184757 | None:intergenic | 50.0% | |
| AGACTCTGGGCCTGTTTGAA+TGG | + | chr3_1:91185333-91185352 | Msa0387290:intron | 50.0% | |
| TCAGATACTCGAGCAGGAGA+AGG | + | chr3_1:91185868-91185887 | Msa0387290:CDS | 50.0% | |
| ATACTCGAGCAGGAGAAGGA+AGG | + | chr3_1:91185872-91185891 | Msa0387290:CDS | 50.0% | |
| TACTCGAGCAGGAGAAGGAA+GGG | + | chr3_1:91185873-91185892 | Msa0387290:CDS | 50.0% | |
| GCTGAGGGTTCATTGTCTCT+TGG | + | chr3_1:91185985-91186004 | Msa0387290:CDS | 50.0% | |
| ! | TCACACTGGTCTCAAGTGCT+TGG | + | chr3_1:91186015-91186034 | Msa0387290:CDS | 50.0% |
| TTGCCAATCTTATGCTCCGC+AGG | + | chr3_1:91186116-91186135 | Msa0387290:CDS | 50.0% | |
| TGACCTGCGGAGCATAAGAT+TGG | - | chr3_1:91186122-91186141 | None:intergenic | 50.0% | |
| TTAGTGGAAGTCGTGACCTG+CGG | - | chr3_1:91186135-91186154 | None:intergenic | 50.0% | |
| TCAAGCTTCTCTCAAGGGAG+GGG | - | chr3_1:91186685-91186704 | None:intergenic | 50.0% | |
| ! | GTTCAAGCATCTTTGAGGGG+AGG | + | chr3_1:91187283-91187302 | Msa0387290:intron | 50.0% |
| ! | TCAAGCATCTTTGAGGGGAG+GGG | + | chr3_1:91187285-91187304 | Msa0387290:intron | 50.0% |
| CATCAACAAGCCTGCTTTGG+GGG | - | chr3_1:91187585-91187604 | None:intergenic | 50.0% | |
| !! | TTCAAAACTGGGCGCTGAAG+GGG | - | chr3_1:91187731-91187750 | None:intergenic | 50.0% |
| !! | CTTCAAAACTGGGCGCTGAA+GGG | - | chr3_1:91187732-91187751 | None:intergenic | 50.0% |
| !! | TCTTCAAAACTGGGCGCTGA+AGG | - | chr3_1:91187733-91187752 | None:intergenic | 50.0% |
| !! | GCTTTTTGGGAGATGGAGCT+AGG | - | chr3_1:91188010-91188029 | None:intergenic | 50.0% |
| CTGATTCTCGCCTTCAAGCT+AGG | - | chr3_1:91189036-91189055 | None:intergenic | 50.0% | |
| CTAGCTTGAAGGCGAGAATC+AGG | + | chr3_1:91189034-91189053 | Msa0387290:intron | 50.0% | |
| GAAGGCGAGAATCAGGCTTT+AGG | + | chr3_1:91189041-91189060 | Msa0387290:intron | 50.0% | |
| GTATGGTTGCGTCTCCTTTG+CGG | + | chr3_1:91189210-91189229 | Msa0387290:intron | 50.0% | |
| CGTCTCCAAGCTCAAGACCT+AGG | + | chr3_1:91184462-91184481 | Msa0387290:CDS | 55.0% | |
| CGTAGCCTAGGTCTTGAGCT+TGG | - | chr3_1:91184470-91184489 | None:intergenic | 55.0% | |
| CGAAGTTGGGATCGTAGCCT+AGG | - | chr3_1:91184482-91184501 | None:intergenic | 55.0% | |
| GACTGGATCGGGAACGAAGT+TGG | - | chr3_1:91184496-91184515 | None:intergenic | 55.0% | |
| GGTGGCGAAACCACATCTCA+CGG | - | chr3_1:91184698-91184717 | None:intergenic | 55.0% | |
| GAGTGAGACGAGCATAGAGG+TGG | - | chr3_1:91184716-91184735 | None:intergenic | 55.0% | |
| ACGGCTGGGCCTTTCAAAAG+CGG | + | chr3_1:91189771-91189790 | Msa0387290:three_prime_UTR | 55.0% | |
| !! | GCGACTCCTCCGCTTTTGAA+AGG | - | chr3_1:91189783-91189802 | None:intergenic | 55.0% |
| TGAGCGACAGCGTCTACGGA+GGG | - | chr3_1:91184639-91184658 | None:intergenic | 60.0% | |
| TTGAGCGACAGCGTCTACGG+AGG | - | chr3_1:91184640-91184659 | None:intergenic | 60.0% | |
| GCTGGGCCTTTCAAAAGCGG+AGG | + | chr3_1:91189774-91189793 | Msa0387290:three_prime_UTR | 60.0% | |
| ACAGCGTCTACGGAGGGCCA+TGG | - | chr3_1:91184633-91184652 | None:intergenic | 65.0% | |
| !! | GCTTTGGGGGCAGAGCGAGA+GGG | - | chr3_1:91187572-91187591 | None:intergenic | 65.0% |
| !! | TGCTTTGGGGGCAGAGCGAG+AGG | - | chr3_1:91187573-91187592 | None:intergenic | 65.0% |
| TCTCGCTCTGCCCCCAAAGC+AGG | + | chr3_1:91187572-91187591 | Msa0387290:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 91184340 | 91189899 | 91184340 | ID=Msa0387290;Name=Msa0387290 |
| chr3_1 | mRNA | 91184340 | 91189899 | 91184340 | ID=Msa0387290-mRNA-1;Parent=Msa0387290;Name=Msa0387290-mRNA-1;_AED=0.04;_eAED=0.04;_QI=104|0.75|0.88|0.88|0.87|0.77|9|459|526 |
| chr3_1 | exon | 91184340 | 91184947 | 91184340 | ID=Msa0387290-mRNA-1:exon:25366;Parent=Msa0387290-mRNA-1 |
| chr3_1 | exon | 91185806 | 91186137 | 91185806 | ID=Msa0387290-mRNA-1:exon:25367;Parent=Msa0387290-mRNA-1 |
| chr3_1 | exon | 91187435 | 91187774 | 91187435 | ID=Msa0387290-mRNA-1:exon:25368;Parent=Msa0387290-mRNA-1 |
| chr3_1 | exon | 91188251 | 91188295 | 91188251 | ID=Msa0387290-mRNA-1:exon:25369;Parent=Msa0387290-mRNA-1 |
| chr3_1 | exon | 91188417 | 91188565 | 91188417 | ID=Msa0387290-mRNA-1:exon:25370;Parent=Msa0387290-mRNA-1 |
| chr3_1 | exon | 91188681 | 91188774 | 91188681 | ID=Msa0387290-mRNA-1:exon:25371;Parent=Msa0387290-mRNA-1 |
| chr3_1 | exon | 91189138 | 91189209 | 91189138 | ID=Msa0387290-mRNA-1:exon:25372;Parent=Msa0387290-mRNA-1 |
| chr3_1 | exon | 91189368 | 91189712 | 91189368 | ID=Msa0387290-mRNA-1:exon:25373;Parent=Msa0387290-mRNA-1 |
| chr3_1 | exon | 91189741 | 91189899 | 91189741 | ID=Msa0387290-mRNA-1:exon:25374;Parent=Msa0387290-mRNA-1 |
| chr3_1 | five_prime_UTR | 91184340 | 91184443 | 91184340 | ID=Msa0387290-mRNA-1:five_prime_utr;Parent=Msa0387290-mRNA-1 |
| chr3_1 | CDS | 91184444 | 91184947 | 91184444 | ID=Msa0387290-mRNA-1:cds;Parent=Msa0387290-mRNA-1 |
| chr3_1 | CDS | 91185806 | 91186137 | 91185806 | ID=Msa0387290-mRNA-1:cds;Parent=Msa0387290-mRNA-1 |
| chr3_1 | CDS | 91187435 | 91187774 | 91187435 | ID=Msa0387290-mRNA-1:cds;Parent=Msa0387290-mRNA-1 |
| chr3_1 | CDS | 91188251 | 91188295 | 91188251 | ID=Msa0387290-mRNA-1:cds;Parent=Msa0387290-mRNA-1 |
| chr3_1 | CDS | 91188417 | 91188565 | 91188417 | ID=Msa0387290-mRNA-1:cds;Parent=Msa0387290-mRNA-1 |
| chr3_1 | CDS | 91188681 | 91188774 | 91188681 | ID=Msa0387290-mRNA-1:cds;Parent=Msa0387290-mRNA-1 |
| chr3_1 | CDS | 91189138 | 91189209 | 91189138 | ID=Msa0387290-mRNA-1:cds;Parent=Msa0387290-mRNA-1 |
| chr3_1 | CDS | 91189368 | 91189412 | 91189368 | ID=Msa0387290-mRNA-1:cds;Parent=Msa0387290-mRNA-1 |
| chr3_1 | three_prime_UTR | 91189413 | 91189712 | 91189413 | ID=Msa0387290-mRNA-1:three_prime_utr;Parent=Msa0387290-mRNA-1 |
| chr3_1 | three_prime_UTR | 91189741 | 91189899 | 91189741 | ID=Msa0387290-mRNA-1:three_prime_utr;Parent=Msa0387290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
