Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477670 | XP_013461988.1 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477670 | sp|A7SDW5|EIF3L_NEMVE | 44.208 | 518 | 248 | 10 | 20 | 523 | 35 | 525 | 3.44e-155 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477670 | G7ZWE0 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003030 | Msa0477670 | 0.816896 | 4.364933e-52 | -8.615850e-47 |
| Msa0016440 | Msa0477670 | 0.829147 | 6.056297e-55 | -8.615850e-47 |
| Msa0020870 | Msa0477670 | 0.819456 | 1.150722e-52 | -8.615850e-47 |
| Msa0026270 | Msa0477670 | 0.812311 | 4.519828e-51 | -8.615850e-47 |
| Msa0042510 | Msa0477670 | 0.857288 | 1.807181e-62 | -8.615850e-47 |
| Msa0079560 | Msa0477670 | 0.849272 | 3.596941e-60 | -8.615850e-47 |
| Msa0094940 | Msa0477670 | 0.802463 | 5.543952e-49 | -8.615850e-47 |
| Msa0127230 | Msa0477670 | 0.854116 | 1.524983e-61 | -8.615850e-47 |
| Msa0146910 | Msa0477670 | 0.819150 | 1.351119e-52 | -8.615850e-47 |
| Msa0226620 | Msa0477670 | 0.810954 | 8.913908e-51 | -8.615850e-47 |
| Msa0377610 | Msa0477670 | 0.816977 | 4.186775e-52 | -8.615850e-47 |
| Msa0383240 | Msa0477670 | 0.817961 | 2.513659e-52 | -8.615850e-47 |
| Msa0387290 | Msa0477670 | 0.925298 | 2.217982e-90 | -8.615850e-47 |
| Msa0388540 | Msa0477670 | 0.861748 | 8.248464e-64 | -8.615850e-47 |
| Msa0426820 | Msa0477670 | 0.871877 | 4.889621e-67 | -8.615850e-47 |
| Msa0427380 | Msa0477670 | 0.825580 | 4.337365e-54 | -8.615850e-47 |
| Msa0467740 | Msa0477670 | 0.837985 | 3.762617e-57 | -8.615850e-47 |
| Msa0477670 | Msa0514130 | 0.831201 | 1.908728e-55 | -8.615850e-47 |
| Msa0477670 | Msa0578010 | 0.803109 | 4.077768e-49 | -8.615850e-47 |
| Msa0477670 | Msa0621190 | 0.842399 | 2.647952e-58 | -8.615850e-47 |
| Msa0477670 | Msa0656450 | 0.842319 | 2.781459e-58 | -8.615850e-47 |
| Msa0477670 | Msa0700370 | 0.858603 | 7.354023e-63 | -8.615850e-47 |
| Msa0477670 | Msa0709380 | 0.844083 | 9.414450e-59 | -8.615850e-47 |
| Msa0477670 | Msa0724530 | 0.803290 | 3.740147e-49 | -8.615850e-47 |
| Msa0477670 | Msa0858190 | 0.816550 | 5.219642e-52 | -8.615850e-47 |
| Msa0477670 | Msa0930360 | 0.846034 | 2.798440e-59 | -8.615850e-47 |
| Msa0477670 | Msa0930790 | 0.806565 | 7.733554e-50 | -8.615850e-47 |
| Msa0477670 | Msa0987570 | 0.872590 | 2.830507e-67 | -8.615850e-47 |
| Msa0477670 | Msa0998890 | 0.830344 | 3.097000e-55 | -8.615850e-47 |
| Msa0477670 | Msa1041830 | 0.822656 | 2.108045e-53 | -8.615850e-47 |
| Msa0477670 | Msa1124980 | 0.801346 | 9.403862e-49 | -8.615850e-47 |
| Msa0477670 | Msa1144630 | 0.893801 | 4.478936e-75 | -8.615850e-47 |
| Msa0477670 | Msa1165700 | 0.881722 | 1.895316e-70 | -8.615850e-47 |
| Msa0477670 | Msa1185870 | 0.812175 | 4.839568e-51 | -8.615850e-47 |
| Msa0477670 | Msa1284800 | 0.811696 | 6.152635e-51 | -8.615850e-47 |
| Msa0477670 | Msa1363930 | 0.892939 | 9.994552e-75 | -8.615850e-47 |
| Msa0477670 | Msa1366540 | 0.814110 | 1.819940e-51 | -8.615850e-47 |
| Msa0477670 | Msa1387750 | 0.858132 | 1.015922e-62 | -8.615850e-47 |
| Msa0477670 | Msa1403520 | 0.807933 | 3.968059e-50 | -8.615850e-47 |
| Msa0477670 | Msa1413570 | 0.832208 | 1.077981e-55 | -8.615850e-47 |
| Msa0477670 | Msa1463510 | 0.983126 | 6.727560e-157 | -8.615850e-47 |
| Msa0477670 | Msa1465890 | 0.860355 | 2.188211e-63 | -8.615850e-47 |
| Msa0260270 | Msa0477670 | 0.809420 | 1.909204e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477670 | MtrunA17_Chr3g0139831 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477670 | AT5G25757.1 | 80.306 | 523 | 86 | 3 | 5 | 526 | 8 | 514 | 0.0 | 869 |
| Msa0477670 | AT5G25754.1 | 80.306 | 523 | 86 | 3 | 5 | 526 | 8 | 514 | 0.0 | 869 |
Find 132 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTCAGGTTGTTCTTCA+TGG | 0.130061 | 3_3:-81984258 | Msa0477670:CDS |
| CTCTGAGCCTTCTATGTTAA+TGG | 0.150810 | 3_3:-81980269 | Msa0477670:CDS |
| TAATTACTGCAGTCTCTTTC+AGG | 0.189483 | 3_3:-81984271 | Msa0477670:CDS |
| GAATCAATGGCTTTGGGATA+TGG | 0.229252 | 3_3:-81984214 | Msa0477670:CDS |
| TTATTGCTGAACGCTGTTAA+TGG | 0.237099 | 3_3:-81978862 | Msa0477670:three_prime_UTR |
| AAGTAGATGAACCAACTTTA+AGG | 0.240848 | 3_3:-81979987 | Msa0477670:intron |
| TACTAGAGGCTCTTCAAAAC+TGG | 0.270914 | 3_3:+81980784 | None:intergenic |
| GCCGGCAAAGCAAATTAAAA+AGG | 0.279775 | 3_3:+81979088 | None:intergenic |
| TAGCAATGTCTTGAAAGTTT+TGG | 0.293530 | 3_3:-81982590 | Msa0477670:CDS |
| CGCAGTATCCAAACAGATTA+GGG | 0.294334 | 3_3:+81984657 | None:intergenic |
| TTCATCAACAAGCCTGCTTT+GGG | 0.303001 | 3_3:+81980940 | None:intergenic |
| GGTGTTTACACCATTGTTAT+TGG | 0.316510 | 3_3:-81982469 | Msa0477670:CDS |
| CGCTGAAGGGGTAATAAACT+TGG | 0.322037 | 3_3:+81980808 | None:intergenic |
| CTGAGGGTTCATTGTCTCTT+GGG | 0.323751 | 3_3:-81982544 | Msa0477670:CDS |
| GCTGAGGGTTCATTGTCTCT+TGG | 0.330424 | 3_3:-81982545 | Msa0477670:CDS |
| ATTACCACCATTTACCACTA+TGG | 0.330766 | 3_3:-81982439 | Msa0477670:CDS |
| AGCTTCCGAATCAATGGCTT+TGG | 0.332438 | 3_3:-81984221 | Msa0477670:CDS |
| TTTCATCAACAAGCCTGCTT+TGG | 0.334356 | 3_3:+81980939 | None:intergenic |
| GGAAAGAAGTTTCGTACATT+TGG | 0.342653 | 3_3:+81984463 | None:intergenic |
| GGCAAAACCATAGTGGTAAA+TGG | 0.355256 | 3_3:+81982432 | None:intergenic |
| CCGCAGTATCCAAACAGATT+AGG | 0.356064 | 3_3:+81984656 | None:intergenic |
| GATGTACTTGGCACCCTTAT+CGG | 0.358467 | 3_3:-81979115 | Msa0477670:three_prime_UTR |
| CTTCTTGCGTCAGGTTGTTA+AGG | 0.370724 | 3_3:-81979343 | Msa0477670:intron |
| ACAGCGTTCAGCAATAAATA+AGG | 0.375191 | 3_3:+81978868 | None:intergenic |
| AAGCAACAACAGTTGTTATC+AGG | 0.387793 | 3_3:-81980072 | Msa0477670:CDS |
| CCTATCTGACCGTTTCTTCA+AGG | 0.387841 | 3_3:-81984436 | Msa0477670:CDS |
| AATAAAGCCATTAACATAGA+AGG | 0.390415 | 3_3:+81980262 | None:intergenic |
| AGAAACGGTCAGATAGGGTT+TGG | 0.394229 | 3_3:+81984442 | None:intergenic |
| TGAACAAATGTATGCGTTGC+TGG | 0.399391 | 3_3:-81980984 | Msa0477670:CDS |
| TATGTTAATGGCTTTATTTG+AGG | 0.401710 | 3_3:-81980257 | Msa0477670:intron |
| GTTGTTGCTTTGCTTCATAA+AGG | 0.402516 | 3_3:+81980085 | None:intergenic |
| CCTGACTGACTAATATCAAT+AGG | 0.413043 | 3_3:+81982490 | None:intergenic |
| TTCAATATCTGTTCATATTG+TGG | 0.422018 | 3_3:+81981013 | None:intergenic |
| ACTGGATCGGGAACGAAGTT+GGG | 0.422123 | 3_3:+81984546 | None:intergenic |
| CTTGTACATCTTTAAGTACA+AGG | 0.428339 | 3_3:-81981053 | Msa0477670:CDS |
| TCTCAGTTGCGAGAGAAGTA+TGG | 0.431894 | 3_3:-81980908 | Msa0477670:CDS |
| CCTATTGATATTAGTCAGTC+AGG | 0.436140 | 3_3:-81982490 | Msa0477670:CDS |
| TTGGGGTATTTCAGTATGGT+TGG | 0.437805 | 3_3:-81982571 | Msa0477670:CDS |
| GACTGGATCGGGAACGAAGT+TGG | 0.438328 | 3_3:+81984545 | None:intergenic |
| GAAGTAATCTCCATACCGTT+TGG | 0.439729 | 3_3:+81979362 | None:intergenic |
| GCTTCCGAATCAATGGCTTT+GGG | 0.440244 | 3_3:-81984220 | Msa0477670:CDS |
| TGCAAAACTTGCAAGTTACA+TGG | 0.442232 | 3_3:-81980010 | Msa0477670:CDS |
| GTCTTGTTTGCAGCTTGAAA+AGG | 0.447914 | 3_3:-81979176 | Msa0477670:intron |
| TCTTCAAAACTGGGCGCTGA+AGG | 0.452512 | 3_3:+81980794 | None:intergenic |
| CCTTGAAGAAACGGTCAGAT+AGG | 0.454544 | 3_3:+81984436 | None:intergenic |
| TGGAGATTACTTCTTGCGTC+AGG | 0.454633 | 3_3:-81979352 | Msa0477670:CDS |
| ATGTAGATTAATGATACGGC+TGG | 0.471148 | 3_3:-81978804 | Msa0477670:three_prime_UTR |
| AAGAAGTTTCGTACATTTGG+TGG | 0.477971 | 3_3:+81984466 | None:intergenic |
| CTCTGAATCTGCTGTGACAA+TGG | 0.481443 | 3_3:-81984613 | Msa0477670:exon |
| AATATACTTTCAAGAAGGTC+CGG | 0.484004 | 3_3:+81980046 | None:intergenic |
| CAGTATGGTTGGTTTGCTGA+GGG | 0.489529 | 3_3:-81982560 | Msa0477670:CDS |
| GCCCTCATTTGAAAACATAG+TGG | 0.490755 | 3_3:+81978961 | None:intergenic |
| TCTCTTGAAACAGTTCGATC+AGG | 0.490945 | 3_3:-81984112 | Msa0477670:intron |
| TGACCTGCGGAGCATAAGAT+TGG | 0.496399 | 3_3:+81982411 | None:intergenic |
| TCAGTATGGTTGGTTTGCTG+AGG | 0.497191 | 3_3:-81982561 | Msa0477670:CDS |
| TGAGCATCACATACTGAGTA+AGG | 0.498577 | 3_3:+81978741 | None:intergenic |
| AAGTCTTGCAACCTTAAAGT+TGG | 0.500427 | 3_3:+81979976 | None:intergenic |
| ATATGCAGCTTCCGAATCAA+TGG | 0.505365 | 3_3:-81984227 | Msa0477670:CDS |
| TAGTATTTGGTATTACATGT+AGG | 0.513058 | 3_3:+81979020 | None:intergenic |
| CTTCAAAACTGGGCGCTGAA+GGG | 0.514443 | 3_3:+81980795 | None:intergenic |
| ACTCATGCTGTTGATAGTGC+TGG | 0.515009 | 3_3:-81979822 | Msa0477670:CDS |
| CGAGATGGACAGTATAAAGC+TGG | 0.519050 | 3_3:-81979146 | Msa0477670:CDS |
| CTCTTGGGTGATTATCACAC+TGG | 0.525249 | 3_3:-81982529 | Msa0477670:CDS |
| GAGAGAGTGAAGGTAGCTTA+CGG | 0.526072 | 3_3:+81984633 | None:intergenic |
| GCTGAAGGGGTAATAAACTT+GGG | 0.527613 | 3_3:+81980809 | None:intergenic |
| TCACACTGGTCTCAAGTGCT+TGG | 0.527814 | 3_3:-81982515 | Msa0477670:CDS |
| ATAGAAATCCACATCAGCAT+TGG | 0.528493 | 3_3:+81979788 | None:intergenic |
| TTGCCAATCTTATGCTCCGC+AGG | 0.528690 | 3_3:-81982414 | Msa0477670:intron |
| ATATCCCAAAGCCATTGATT+CGG | 0.529948 | 3_3:+81984216 | None:intergenic |
| CTTGAAGAAACGGTCAGATA+GGG | 0.530479 | 3_3:+81984437 | None:intergenic |
| ATGGTGTGTCCTTGAAGAAA+CGG | 0.530687 | 3_3:+81984427 | None:intergenic |
| CATCAACAAGCCTGCTTTGG+GGG | 0.533539 | 3_3:+81980942 | None:intergenic |
| TAATCTCCATACCGTTTGGA+AGG | 0.533943 | 3_3:+81979366 | None:intergenic |
| AGTAATATCCAATGCTGATG+TGG | 0.534293 | 3_3:-81979796 | Msa0477670:CDS |
| CTGGAGTGAGTTGATGTACT+TGG | 0.535340 | 3_3:-81979127 | Msa0477670:exon |
| AACAGTTGTTATCAGGTCTC+CGG | 0.535364 | 3_3:-81980065 | Msa0477670:CDS |
| TCTCTCTGATGTGACGGTAG+AGG | 0.537475 | 3_3:+81984505 | None:intergenic |
| TACTCGAGCAGGAGAAGGAA+GGG | 0.539087 | 3_3:-81982657 | Msa0477670:CDS |
| CGAAGTTGGGATCGTAGCCT+AGG | 0.539968 | 3_3:+81984559 | None:intergenic |
| AAATATGTAGATTAATGATA+CGG | 0.540047 | 3_3:-81978808 | Msa0477670:three_prime_UTR |
| GTATTGAGCGACAGCGTCTA+CGG | 0.542427 | 3_3:+81984398 | None:intergenic |
| TGTTGAATATACTTTCAAGA+AGG | 0.551618 | 3_3:+81980041 | None:intergenic |
| TCTAAACCTTCCAAACGGTA+TGG | 0.552675 | 3_3:-81979372 | Msa0477670:CDS |
| TCGATTCTCTGACGAAGCGT+AGG | 0.552849 | 3_3:+81984303 | None:intergenic |
| TTCAAAACTGGGCGCTGAAG+GGG | 0.556525 | 3_3:+81980796 | None:intergenic |
| CGTAGCCTAGGTCTTGAGCT+TGG | 0.560532 | 3_3:+81984571 | None:intergenic |
| TTCGTCAGAGAATCGATTCG+TGG | 0.564246 | 3_3:-81984296 | Msa0477670:CDS |
| AAATGTGAACAAAATTCTGC+CGG | 0.568648 | 3_3:+81979070 | None:intergenic |
| GTCTTCTCTACCGTGAGATG+TGG | 0.569636 | 3_3:-81984353 | Msa0477670:CDS |
| TCAGATACTCGAGCAGGAGA+AGG | 0.571169 | 3_3:-81982662 | Msa0477670:CDS |
| ACTAGAGGCTCTTCAAAACT+GGG | 0.572995 | 3_3:+81980785 | None:intergenic |
| ATACTCGAGCAGGAGAAGGA+AGG | 0.578832 | 3_3:-81982658 | Msa0477670:CDS |
| CCCTCATTTGAAAACATAGT+GGG | 0.582880 | 3_3:+81978962 | None:intergenic |
| CATTCTTCTCTCTGATGTGA+CGG | 0.584120 | 3_3:+81984499 | None:intergenic |
| GCAGGACACAATTCATGTTG+TGG | 0.584900 | 3_3:-81979397 | Msa0477670:intron |
| ACAGCGTCTACGGAGGGCCA+TGG | 0.585469 | 3_3:+81984408 | None:intergenic |
| CGTCTCCAAGCTCAAGACCT+AGG | 0.590090 | 3_3:-81984576 | Msa0477670:CDS |
| ACCTGGTTGTAATTTACTAG+AGG | 0.590170 | 3_3:+81980770 | None:intergenic |
| TAAGATTGGCAAAACCATAG+TGG | 0.590299 | 3_3:+81982425 | None:intergenic |
| AATTATTCAGATACTCGAGC+AGG | 0.592977 | 3_3:-81982668 | Msa0477670:CDS |
| AGAAGGCTCAGAGTCAATAG+AGG | 0.593706 | 3_3:+81980279 | None:intergenic |
| TCATTTGAAAACATAGTGGG+TGG | 0.596945 | 3_3:+81978965 | None:intergenic |
| TGAAAAGGTGATCAACGAGA+TGG | 0.601494 | 3_3:-81979161 | Msa0477670:CDS |
| TGGAGTCTAAACCTTCCAAA+CGG | 0.607048 | 3_3:-81979377 | Msa0477670:CDS |
| TGTAGATTAATGATACGGCT+GGG | 0.616631 | 3_3:-81978803 | Msa0477670:three_prime_UTR |
| CATATTGTGGAGACTTCTGA+TGG | 0.618356 | 3_3:+81981026 | None:intergenic |
| TAGGAGTGAGACGAGCATAG+AGG | 0.619056 | 3_3:+81984322 | None:intergenic |
| TCGTCAGAGAATCGATTCGT+GGG | 0.622796 | 3_3:-81984295 | Msa0477670:CDS |
| GAGTGAGACGAGCATAGAGG+TGG | 0.627092 | 3_3:+81984325 | None:intergenic |
| ACGGCTGGGCCTTTCAAAAG+CGG | 0.627850 | 3_3:-81978789 | Msa0477670:three_prime_UTR |
| GCCTCTAGTAAATTACAACC+AGG | 0.628196 | 3_3:-81980771 | Msa0477670:intron |
| GATGGCTATGATTACAATGG+TGG | 0.631082 | 3_3:-81982613 | Msa0477670:CDS |
| TGAGCGACAGCGTCTACGGA+GGG | 0.640297 | 3_3:+81984402 | None:intergenic |
| CATTTGAAAACATAGTGGGT+GGG | 0.641437 | 3_3:+81978966 | None:intergenic |
| GGTGGCGAAACCACATCTCA+CGG | 0.647100 | 3_3:+81984343 | None:intergenic |
| GAGCAATTCACTGCAAACGA+TGG | 0.649501 | 3_3:-81982631 | Msa0477670:CDS |
| CCTAATCTGTTTGGATACTG+CGG | 0.649911 | 3_3:-81984656 | Msa0477670:five_prime_UTR |
| TCATCAACAAGCCTGCTTTG+GGG | 0.650115 | 3_3:+81980941 | None:intergenic |
| AGTGGTAAATGGTGGTAATG+TGG | 0.651980 | 3_3:+81982443 | None:intergenic |
| AATGCAACGATATGATGATG+AGG | 0.655375 | 3_3:-81980870 | Msa0477670:CDS |
| GCTGGGCCTTTCAAAAGCGG+AGG | 0.656562 | 3_3:-81978786 | Msa0477670:three_prime_UTR |
| AGCAGATTCAGAGAGAGTGA+AGG | 0.660117 | 3_3:+81984623 | None:intergenic |
| CTGAAGGGGTAATAAACTTG+GGG | 0.662460 | 3_3:+81980810 | None:intergenic |
| TTGAGCGACAGCGTCTACGG+AGG | 0.671373 | 3_3:+81984401 | None:intergenic |
| GTTTCTTCAAGGACACACCA+TGG | 0.673800 | 3_3:-81984425 | Msa0477670:CDS |
| AAAACCATAGTGGTAAATGG+TGG | 0.678504 | 3_3:+81982435 | None:intergenic |
| ACAACGCCTCAAAAGAAACA+TGG | 0.687118 | 3_3:+81978902 | None:intergenic |
| GGTAGAGAAGACAGAAGACA+TGG | 0.688600 | 3_3:+81984364 | None:intergenic |
| ACGGTAGAGGTGAACAACGA+AGG | 0.689816 | 3_3:+81984518 | None:intergenic |
| TACTGAGTAAGGATAGCTAG+CGG | 0.714399 | 3_3:+81978752 | None:intergenic |
| AACGATGGCTATGATTACAA+TGG | 0.723830 | 3_3:-81982616 | Msa0477670:CDS |
| AATGTGGCATCCAATAACAA+TGG | 0.744265 | 3_3:+81982459 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAATTTATGATTTTCTT+AGG | - | chr3_3:81980404-81980423 | Msa0477670:intron | 10.0% |
| !!! | TAATAAGATAATAATTTTTC+GGG | + | chr3_3:81980456-81980475 | None:intergenic | 10.0% |
| !! | GAAATAAAAAAAATTATTGA+GGG | + | chr3_3:81981626-81981645 | None:intergenic | 10.0% |
| !! | AGAAATAAAAAAAATTATTG+AGG | + | chr3_3:81981627-81981646 | None:intergenic | 10.0% |
| !!! | TTGTTTCATATTTTATAATA+GGG | + | chr3_3:81981787-81981806 | None:intergenic | 10.0% |
| !!! | CACATATTTTAATTTTATTT+TGG | + | chr3_3:81981811-81981830 | None:intergenic | 10.0% |
| !!! | ACGAATTTATATTTTTTAAA+TGG | - | chr3_3:81981949-81981968 | Msa0477670:intron | 10.0% |
| !! | AGTATTTATTTATGTTAAAA+TGG | - | chr3_3:81981999-81982018 | Msa0477670:intron | 10.0% |
| !! | TTATAAATTATTACATTACA+TGG | - | chr3_3:81982258-81982277 | Msa0477670:intron | 10.0% |
| !! | AGTAATTTATATATTAAAAG+GGG | + | chr3_3:81983240-81983259 | None:intergenic | 10.0% |
| !!! | TAAAATTTTTAAATAGTTTC+TGG | - | chr3_3:81983711-81983730 | Msa0477670:intron | 10.0% |
| !!! | AAAATTTTTAAATAGTTTCT+GGG | - | chr3_3:81983712-81983731 | Msa0477670:intron | 10.0% |
| !!! | TTTATTATCTATTTTATCAG+AGG | - | chr3_3:81979376-81979395 | Msa0477670:CDS | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr3_3:81980121-81980140 | None:intergenic | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr3_3:81980484-81980503 | Msa0477670:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | chr3_3:81980522-81980541 | None:intergenic | 15.0% |
| !! | ATTTAGTATTCATTAGAAAT+TGG | - | chr3_3:81981352-81981371 | Msa0477670:intron | 15.0% |
| !!! | TTTGAAATATAATTCTACAA+TGG | + | chr3_3:81981413-81981432 | None:intergenic | 15.0% |
| !!! | TAATATGTTTTGAATAAAAG+GGG | + | chr3_3:81981516-81981535 | None:intergenic | 15.0% |
| !!! | CTAATATGTTTTGAATAAAA+GGG | + | chr3_3:81981517-81981536 | None:intergenic | 15.0% |
| !!! | TCTAATATGTTTTGAATAAA+AGG | + | chr3_3:81981518-81981537 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTAACATAAGAG+GGG | + | chr3_3:81981591-81981610 | None:intergenic | 15.0% |
| !!! | GATTTTATTTTAACATAAGA+GGG | + | chr3_3:81981592-81981611 | None:intergenic | 15.0% |
| !!! | AGATTTTATTTTAACATAAG+AGG | + | chr3_3:81981593-81981612 | None:intergenic | 15.0% |
| !!! | GTTGTTTCATATTTTATAAT+AGG | + | chr3_3:81981788-81981807 | None:intergenic | 15.0% |
| !! | TTTAAATAACCATACTTAAT+CGG | + | chr3_3:81981848-81981867 | None:intergenic | 15.0% |
| !!! | TAGTCCTTATTTAATTATTA+AGG | - | chr3_3:81982031-81982050 | Msa0477670:intron | 15.0% |
| !!! | AGTCCTTATTTAATTATTAA+GGG | - | chr3_3:81982032-81982051 | Msa0477670:intron | 15.0% |
| !!! | AGTATAAATTTTACTTTTCA+AGG | - | chr3_3:81982091-81982110 | Msa0477670:intron | 15.0% |
| !!! | GTATAAATTTTACTTTTCAA+GGG | - | chr3_3:81982092-81982111 | Msa0477670:intron | 15.0% |
| !! | TAATTTATATATTAAAAGGG+GGG | + | chr3_3:81983238-81983257 | None:intergenic | 15.0% |
| !! | GTAATTTATATATTAAAAGG+GGG | + | chr3_3:81983239-81983258 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATATTGATCCA+AGG | + | chr3_3:81983462-81983481 | None:intergenic | 15.0% |
| !! | AAATATGTAGATTAATGATA+CGG | - | chr3_3:81984586-81984605 | Msa0477670:CDS | 15.0% |
| !! | TATATGTTCAAAAACATTAT+TGG | + | chr3_3:81984701-81984720 | None:intergenic | 15.0% |
| !!! | ATAAGCTATTTCTATAACAA+AGG | + | chr3_3:81979897-81979916 | None:intergenic | 20.0% |
| !! | TATAGAAATAGCTTATACTT+AGG | - | chr3_3:81979901-81979920 | Msa0477670:intron | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | chr3_3:81980094-81980113 | Msa0477670:CDS | 20.0% |
| !! | AAACTCTTTGAATTAATACT+CGG | + | chr3_3:81980560-81980579 | None:intergenic | 20.0% |
| !! | CTCAAATAAATTAGTATAGT+TGG | + | chr3_3:81981134-81981153 | None:intergenic | 20.0% |
| !! | CAACTATACTAATTTATTTG+AGG | - | chr3_3:81981132-81981151 | Msa0477670:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | + | chr3_3:81981486-81981505 | None:intergenic | 20.0% |
| !!! | GTGTATATTTTAACATAAGA+GGG | + | chr3_3:81981487-81981506 | None:intergenic | 20.0% |
| !!! | AGTGTATATTTTAACATAAG+AGG | + | chr3_3:81981488-81981507 | None:intergenic | 20.0% |
| !! | CTTATTTAATTATTAAGGGA+GGG | - | chr3_3:81982036-81982055 | Msa0477670:intron | 20.0% |
| !! | TTATTTAATTATTAAGGGAG+GGG | - | chr3_3:81982037-81982056 | Msa0477670:intron | 20.0% |
| !! | AATAATTTATAACCCAAGAA+GGG | + | chr3_3:81982250-81982269 | None:intergenic | 20.0% |
| !! | TAATAATTTATAACCCAAGA+AGG | + | chr3_3:81982251-81982270 | None:intergenic | 20.0% |
| !!! | ACTTCAAATTTGAAATGTTT+GGG | + | chr3_3:81982719-81982738 | None:intergenic | 20.0% |
| !!! | AACTTCAAATTTGAAATGTT+TGG | + | chr3_3:81982720-81982739 | None:intergenic | 20.0% |
| !!! | AATTCAAATTTGAAGCTAAT+TGG | + | chr3_3:81982747-81982766 | None:intergenic | 20.0% |
| !! | CTTGACAAATCTAAATAATA+TGG | + | chr3_3:81984100-81984119 | None:intergenic | 20.0% |
| !!! | ATTCAATATTCCTTTTTTTG+TGG | - | chr3_3:81984462-81984481 | Msa0477670:CDS | 20.0% |
| !! | TTATCTATTTTATCAGAGGT+AGG | - | chr3_3:81979380-81979399 | Msa0477670:CDS | 25.0% |
| !! | TATCTATTTTATCAGAGGTA+GGG | - | chr3_3:81979381-81979400 | Msa0477670:CDS | 25.0% |
| !! | TGGATTGATTTATTTGAGTT+TGG | - | chr3_3:81979410-81979429 | Msa0477670:intron | 25.0% |
| !! | GGATTGATTTATTTGAGTTT+GGG | - | chr3_3:81979411-81979430 | Msa0477670:intron | 25.0% |
| !!! | TTTGGATTGACTTTTTTGTT+CGG | - | chr3_3:81979438-81979457 | Msa0477670:intron | 25.0% |
| !!! | ATTGTTTTTGCAAATGCTAT+AGG | + | chr3_3:81979551-81979570 | None:intergenic | 25.0% |
| ! | TGTTTATGCTAGTATATAGA+GGG | + | chr3_3:81979672-81979691 | None:intergenic | 25.0% |
| ! | AAATAAGGTAAAAACAGCTA+TGG | + | chr3_3:81979987-81980006 | None:intergenic | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr3_3:81980099-81980118 | Msa0477670:CDS | 25.0% |
| !! | AACATAATTAAGACCCTTTT+TGG | + | chr3_3:81980633-81980652 | None:intergenic | 25.0% |
| ! | TGTAATTTAAGCATCTTTGA+GGG | + | chr3_3:81981456-81981475 | None:intergenic | 25.0% |
| !!! | TATTTTTCTTTGAAGTGTGT+AGG | + | chr3_3:81981673-81981692 | None:intergenic | 25.0% |
| ! | TCAAAGAAAAATAGCATTGT+AGG | - | chr3_3:81981680-81981699 | Msa0477670:intron | 25.0% |
| ! | TTATTAAAGCCGATTAAGTA+TGG | - | chr3_3:81981836-81981855 | Msa0477670:intron | 25.0% |
| ! | CCTCCCTTAATAATTAAATA+AGG | + | chr3_3:81982038-81982057 | None:intergenic | 25.0% |
| !! | CCTTATTTAATTATTAAGGG+AGG | - | chr3_3:81982035-81982054 | Msa0477670:intron | 25.0% |
| ! | TATTTAATTATTAAGGGAGG+GGG | - | chr3_3:81982038-81982057 | Msa0477670:intron | 25.0% |
| ! | TTGTAATTCAAGCATCTTAT+AGG | - | chr3_3:81982061-81982080 | Msa0477670:intron | 25.0% |
| ! | TGTAATTCAAGCATCTTATA+GGG | - | chr3_3:81982062-81982081 | Msa0477670:intron | 25.0% |
| !!! | TAAATTTTACTTTTCAAGGG+AGG | - | chr3_3:81982095-81982114 | Msa0477670:intron | 25.0% |
| !!! | AAATTTTACTTTTCAAGGGA+GGG | - | chr3_3:81982096-81982115 | Msa0477670:intron | 25.0% |
| ! | AGTGTATATTTCAACATAAG+AGG | - | chr3_3:81982120-81982139 | Msa0477670:intron | 25.0% |
| ! | GTGTATATTTCAACATAAGA+GGG | - | chr3_3:81982121-81982140 | Msa0477670:intron | 25.0% |
| ! | TGTATATTTCAACATAAGAG+GGG | - | chr3_3:81982122-81982141 | Msa0477670:intron | 25.0% |
| ! | TTCAATATCTGTTCATATTG+TGG | + | chr3_3:81982384-81982403 | None:intergenic | 25.0% |
| ! | AAACCAGATTTATTTCAATC+TGG | + | chr3_3:81982843-81982862 | None:intergenic | 25.0% |
| ! | AGATTGAAATAAATCTGGTT+TGG | - | chr3_3:81982842-81982861 | Msa0477670:intron | 25.0% |
| !!! | CTTGTTACCTGATTTTTTAT+GGG | - | chr3_3:81983019-81983038 | Msa0477670:intron | 25.0% |
| !!! | TTGTTACCTGATTTTTTATG+GGG | - | chr3_3:81983020-81983039 | Msa0477670:intron | 25.0% |
| ! | AATAAAGCCATTAACATAGA+AGG | + | chr3_3:81983135-81983154 | None:intergenic | 25.0% |
| !!! | TATGTTAATGGCTTTATTTG+AGG | - | chr3_3:81983137-81983156 | Msa0477670:intron | 25.0% |
| ! | TGTTGAATATACTTTCAAGA+AGG | + | chr3_3:81983356-81983375 | None:intergenic | 25.0% |
| ! | TAATTAATCTAGCATTTCCT+TGG | - | chr3_3:81983442-81983461 | Msa0477670:intron | 25.0% |
| !! | ATGATGTTTTCATTTATTGC+AGG | - | chr3_3:81983979-81983998 | Msa0477670:intron | 25.0% |
| !!! | AGACAAAAACATTTGACTTT+TGG | - | chr3_3:81984139-81984158 | Msa0477670:CDS | 25.0% |
| !! | TTTTGTTCACATTTTGTTGA+AGG | - | chr3_3:81984333-81984352 | Msa0477670:CDS | 25.0% |
| !! | TTTGTTCACATTTTGTTGAA+GGG | - | chr3_3:81984334-81984353 | Msa0477670:CDS | 25.0% |
| ! | TAGTATTTGGTATTACATGT+AGG | + | chr3_3:81984377-81984396 | None:intergenic | 25.0% |
| ! | GACAAGCAAAAAATAGTATT+TGG | + | chr3_3:81984390-81984409 | None:intergenic | 25.0% |
| !!! | TTTGCTTGTCTTTTATTTAG+AGG | - | chr3_3:81984400-81984419 | Msa0477670:CDS | 25.0% |
| AACAAAAACCCTAATCTGTT+TGG | - | chr3_3:81978729-81978748 | Msa0477670:three_prime_UTR | 30.0% | |
| ! | TTTTTGTTCGGTAGAACTTT+TGG | - | chr3_3:81979450-81979469 | Msa0477670:intron | 30.0% |
| !! | GAACTTTTGGAAACAACTTA+TGG | - | chr3_3:81979463-81979482 | Msa0477670:intron | 30.0% |
| GTGTTTATGCTAGTATATAG+AGG | + | chr3_3:81979673-81979692 | None:intergenic | 30.0% | |
| TCAAATAAGTCCATTCAAAC+AGG | + | chr3_3:81979711-81979730 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCCAT+TGG | - | chr3_3:81979721-81979740 | Msa0477670:intron | 30.0% | |
| TTGGAAAACTTGTGGAAATA+AGG | + | chr3_3:81980002-81980021 | None:intergenic | 30.0% | |
| ACTGTACATACCAAACAAAA+AGG | - | chr3_3:81980201-81980220 | Msa0477670:intron | 30.0% | |
| GAAGTGTAAATGTAAACAAG+AGG | - | chr3_3:81980329-81980348 | Msa0477670:intron | 30.0% | |
| ! | ATCCCTTTATAATTTTCGGT+CGG | + | chr3_3:81980431-81980450 | None:intergenic | 30.0% |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | chr3_3:81980435-81980454 | None:intergenic | 30.0% |
| ATGAAGTTGTTCATCCAAAA+AGG | - | chr3_3:81980616-81980635 | Msa0477670:intron | 30.0% | |
| TGAAGTTGTTCATCCAAAAA+GGG | - | chr3_3:81980617-81980636 | Msa0477670:intron | 30.0% | |
| ! | TAGCAATGTCTTGAAAGTTT+TGG | - | chr3_3:81980804-81980823 | Msa0477670:CDS | 30.0% |
| ! | AGCAATGTCTTGAAAGTTTT+GGG | - | chr3_3:81980805-81980824 | Msa0477670:CDS | 30.0% |
| ATTTCTATCTCTGTTCTTTC+TGG | - | chr3_3:81981300-81981319 | Msa0477670:intron | 30.0% | |
| TTTCTATCTCTGTTCTTTCT+GGG | - | chr3_3:81981301-81981320 | Msa0477670:intron | 30.0% | |
| AGTAGTTGAGTATCATTTGA+AGG | - | chr3_3:81981377-81981396 | Msa0477670:intron | 30.0% | |
| GTAATTTAAGCATCTTTGAG+GGG | + | chr3_3:81981455-81981474 | None:intergenic | 30.0% | |
| GTGTAATTTAAGCATCTTTG+AGG | + | chr3_3:81981457-81981476 | None:intergenic | 30.0% | |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | chr3_3:81981482-81981501 | None:intergenic | 30.0% |
| !!! | ATATTTTAACATAAGAGGGG+AGG | + | chr3_3:81981483-81981502 | None:intergenic | 30.0% |
| !! | ATGTTTTGAATAAAAGGGGA+GGG | + | chr3_3:81981512-81981531 | None:intergenic | 30.0% |
| !! | TATGTTTTGAATAAAAGGGG+AGG | + | chr3_3:81981513-81981532 | None:intergenic | 30.0% |
| ! | AATTCAAGTTTCTCTCTCAA+GGG | + | chr3_3:81981558-81981577 | None:intergenic | 30.0% |
| ! | TAATTCAAGTTTCTCTCTCA+AGG | + | chr3_3:81981559-81981578 | None:intergenic | 30.0% |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | chr3_3:81981482-81981501 | None:intergenic | 30.0% |
| !!! | TTATTTTAACATAAGAGGGG+AGG | + | chr3_3:81981588-81981607 | None:intergenic | 30.0% |
| !! | AATTTTACTTTTCAAGGGAG+GGG | - | chr3_3:81982097-81982116 | Msa0477670:intron | 30.0% |
| TGTAATTCAAGCATCTTTGA+GGG | - | chr3_3:81982152-81982171 | Msa0477670:intron | 30.0% | |
| CTTGTACATCTTTAAGTACA+AGG | - | chr3_3:81982341-81982360 | Msa0477670:intron | 30.0% | |
| ! | AGTCTAAGATAAGATATACC+TGG | + | chr3_3:81982644-81982663 | None:intergenic | 30.0% |
| CTTCCAGATTGAAATAAATC+TGG | - | chr3_3:81982837-81982856 | Msa0477670:intron | 30.0% | |
| ! | TTCACTTTATGCAGCTTTTT+GGG | + | chr3_3:81982885-81982904 | None:intergenic | 30.0% |
| ! | TTTCACTTTATGCAGCTTTT+TGG | + | chr3_3:81982886-81982905 | None:intergenic | 30.0% |
| !!! | GCTTGTTACCTGATTTTTTA+TGG | - | chr3_3:81983018-81983037 | Msa0477670:intron | 30.0% |
| !!! | TGTTACCTGATTTTTTATGG+GGG | - | chr3_3:81983021-81983040 | Msa0477670:intron | 30.0% |
| ATATATTAAAAGGGGGGAAT+TGG | + | chr3_3:81983232-81983251 | None:intergenic | 30.0% | |
| AATATACTTTCAAGAAGGTC+CGG | + | chr3_3:81983351-81983370 | None:intergenic | 30.0% | |
| AAGTAGATGAACCAACTTTA+AGG | - | chr3_3:81983407-81983426 | Msa0477670:intron | 30.0% | |
| TCTTCAAAGAGAAAAGGATT+AGG | + | chr3_3:81983667-81983686 | None:intergenic | 30.0% | |
| TGAATCTCTTCAAAGAGAAA+AGG | + | chr3_3:81983673-81983692 | None:intergenic | 30.0% | |
| ACAAAATACCTGTGTTTATG+TGG | + | chr3_3:81983738-81983757 | None:intergenic | 30.0% | |
| TATTAATTGTCCTAGCTTGA+AGG | - | chr3_3:81983886-81983905 | Msa0477670:intron | 30.0% | |
| TGTAACAAAATGCAAGCAAT+GGG | + | chr3_3:81984167-81984186 | None:intergenic | 30.0% | |
| TTGTAACAAAATGCAAGCAA+TGG | + | chr3_3:81984168-81984187 | None:intergenic | 30.0% | |
| AAATGTGAACAAAATTCTGC+CGG | + | chr3_3:81984327-81984346 | None:intergenic | 30.0% | |
| TGGTATTTGTCCACAAAAAA+AGG | + | chr3_3:81984475-81984494 | None:intergenic | 30.0% | |
| ! | CAAATACCATGTTTCTTTTG+AGG | - | chr3_3:81984486-81984505 | Msa0477670:CDS | 30.0% |
| AAGAAGTTTCGTACATTTGG+TGG | + | chr3_3:81978931-81978950 | None:intergenic | 35.0% | |
| GGAAAGAAGTTTCGTACATT+TGG | + | chr3_3:81978934-81978953 | None:intergenic | 35.0% | |
| TAATTACTGCAGTCTCTTTC+AGG | - | chr3_3:81979123-81979142 | Msa0477670:exon | 35.0% | |
| ! | ATATCCCAAAGCCATTGATT+CGG | + | chr3_3:81979181-81979200 | None:intergenic | 35.0% |
| ! | TATTTGAGTTTGGGTCTGTT+TGG | - | chr3_3:81979420-81979439 | Msa0477670:intron | 35.0% |
| ! | TAGTATATAGAGGGCTTGTT+TGG | + | chr3_3:81979663-81979682 | None:intergenic | 35.0% |
| ATAAACACTTACGAGACTCT+GGG | - | chr3_3:81979685-81979704 | Msa0477670:intron | 35.0% | |
| ! | AAACTATCTTGGAGTGCTTA+TGG | + | chr3_3:81979826-81979845 | None:intergenic | 35.0% |
| GCTGTTGTCATAAACTATCT+TGG | + | chr3_3:81979837-81979856 | None:intergenic | 35.0% | |
| TTATACTTAGGCGCTTATCA+TGG | - | chr3_3:81979913-81979932 | Msa0477670:intron | 35.0% | |
| !! | GTTGTTTTCATGAGTCAAGT+TGG | + | chr3_3:81980021-81980040 | None:intergenic | 35.0% |
| !!! | GACTGATTTGCCTTTTTGTT+TGG | + | chr3_3:81980214-81980233 | None:intergenic | 35.0% |
| ACTACTGTGTTCATATGCAT+TGG | - | chr3_3:81980288-81980307 | Msa0477670:intron | 35.0% | |
| GACCGACCGAAAATTATAAA+GGG | - | chr3_3:81980426-81980445 | Msa0477670:intron | 35.0% | |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr3_3:81980494-81980513 | Msa0477670:intron | 35.0% |
| !! | ATGTTGTCTTTTGCTGTCTT+AGG | - | chr3_3:81980648-81980667 | Msa0477670:intron | 35.0% |
| ! | TCTTAGGCTTGGAATGTTTT+TGG | - | chr3_3:81980664-81980683 | Msa0477670:intron | 35.0% |
| AATTATTCAGATACTCGAGC+AGG | - | chr3_3:81980726-81980745 | Msa0477670:intron | 35.0% | |
| AACGATGGCTATGATTACAA+TGG | - | chr3_3:81980778-81980797 | Msa0477670:CDS | 35.0% | |
| ! | GCAATGTCTTGAAAGTTTTG+GGG | - | chr3_3:81980806-81980825 | Msa0477670:CDS | 35.0% |
| !!! | AGTTTTGGGGTATTTCAGTA+TGG | - | chr3_3:81980819-81980838 | Msa0477670:CDS | 35.0% |
| CCTGACTGACTAATATCAAT+AGG | + | chr3_3:81980907-81980926 | None:intergenic | 35.0% | |
| CCTATTGATATTAGTCAGTC+AGG | - | chr3_3:81980904-81980923 | Msa0477670:CDS | 35.0% | |
| GGTGTTTACACCATTGTTAT+TGG | - | chr3_3:81980925-81980944 | Msa0477670:CDS | 35.0% | |
| AATGTGGCATCCAATAACAA+TGG | + | chr3_3:81980938-81980957 | None:intergenic | 35.0% | |
| ATTACCACCATTTACCACTA+TGG | - | chr3_3:81980955-81980974 | Msa0477670:CDS | 35.0% | |
| AAAACCATAGTGGTAAATGG+TGG | + | chr3_3:81980962-81980981 | None:intergenic | 35.0% | |
| TAAGATTGGCAAAACCATAG+TGG | + | chr3_3:81980972-81980991 | None:intergenic | 35.0% | |
| TTTGCCTTGTATCACTTGAA+TGG | - | chr3_3:81981159-81981178 | Msa0477670:intron | 35.0% | |
| ATACACTGACAGAATAGAGA+CGG | + | chr3_3:81981185-81981204 | None:intergenic | 35.0% | |
| AGTGTATTGTTTATGTCCAC+AGG | - | chr3_3:81981198-81981217 | Msa0477670:intron | 35.0% | |
| TCCACAGGCTCAAATAATAT+TGG | - | chr3_3:81981213-81981232 | Msa0477670:intron | 35.0% | |
| ACCAATATTATTTGAGCCTG+TGG | + | chr3_3:81981217-81981236 | None:intergenic | 35.0% | |
| ATCTTGCACATATCCACAAA+CGG | - | chr3_3:81981271-81981290 | Msa0477670:intron | 35.0% | |
| TTCTATCTCTGTTCTTTCTG+GGG | - | chr3_3:81981302-81981321 | Msa0477670:intron | 35.0% | |
| TTGAGTATCATTTGAAGGTG+TGG | - | chr3_3:81981382-81981401 | Msa0477670:intron | 35.0% | |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | chr3_3:81981481-81981500 | None:intergenic | 35.0% |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | chr3_3:81981481-81981500 | None:intergenic | 35.0% |
| ATTCAAGCATCTTATAGGGA+AGG | - | chr3_3:81982066-81982085 | Msa0477670:intron | 35.0% | |
| TTCAAGCATCTTATAGGGAA+GGG | - | chr3_3:81982067-81982086 | Msa0477670:intron | 35.0% | |
| ATATTTCAACATAAGAGGGG+AGG | - | chr3_3:81982125-81982144 | Msa0477670:intron | 35.0% | |
| TATTTCAACATAAGAGGGGA+GGG | - | chr3_3:81982126-81982145 | Msa0477670:intron | 35.0% | |
| GTGTAATTCAAGCATCTTTG+AGG | - | chr3_3:81982151-81982170 | Msa0477670:intron | 35.0% | |
| GTAATTCAAGCATCTTTGAG+GGG | - | chr3_3:81982153-81982172 | Msa0477670:intron | 35.0% | |
| TGTAGAAAAGGCTACATTTC+AGG | + | chr3_3:81982284-81982303 | None:intergenic | 35.0% | |
| ! | AATGCAACGATATGATGATG+AGG | - | chr3_3:81982524-81982543 | Msa0477670:CDS | 35.0% |
| ACCTGGTTGTAATTTACTAG+AGG | + | chr3_3:81982627-81982646 | None:intergenic | 35.0% | |
| ATGTACCCCCATAAAAAATC+AGG | + | chr3_3:81983029-81983048 | None:intergenic | 35.0% | |
| CTTAAGTTATTTGTTTCCCC+AGG | - | chr3_3:81983258-81983277 | Msa0477670:intron | 35.0% | |
| !! | GTTGTTGCTTTGCTTCATAA+AGG | + | chr3_3:81983312-81983331 | None:intergenic | 35.0% |
| AAGCAACAACAGTTGTTATC+AGG | - | chr3_3:81983322-81983341 | Msa0477670:intron | 35.0% | |
| !! | GTAACTTGCAAGTTTTGCAA+GGG | + | chr3_3:81983383-81983402 | None:intergenic | 35.0% |
| !! | TGTAACTTGCAAGTTTTGCA+AGG | + | chr3_3:81983384-81983403 | None:intergenic | 35.0% |
| TGCAAAACTTGCAAGTTACA+TGG | - | chr3_3:81983384-81983403 | Msa0477670:intron | 35.0% | |
| AAGTCTTGCAACCTTAAAGT+TGG | + | chr3_3:81983421-81983440 | None:intergenic | 35.0% | |
| !! | TGCATTTCCATTTTGATGCT+TGG | - | chr3_3:81983518-81983537 | Msa0477670:intron | 35.0% |
| AGTAATATCCAATGCTGATG+TGG | - | chr3_3:81983598-81983617 | Msa0477670:intron | 35.0% | |
| ATAGAAATCCACATCAGCAT+TGG | + | chr3_3:81983609-81983628 | None:intergenic | 35.0% | |
| AGTTTAAACCTGTGTCTTGA+TGG | - | chr3_3:81983760-81983779 | Msa0477670:intron | 35.0% | |
| CTAAATAATATGGACCGCAA+AGG | + | chr3_3:81984090-81984109 | None:intergenic | 35.0% | |
| TTAAAAAGGGGAACCGATAA+GGG | + | chr3_3:81984295-81984314 | None:intergenic | 35.0% | |
| ATTAAAAAGGGGAACCGATA+AGG | + | chr3_3:81984296-81984315 | None:intergenic | 35.0% | |
| CGGCAAAGCAAATTAAAAAG+GGG | + | chr3_3:81984307-81984326 | None:intergenic | 35.0% | |
| CCGGCAAAGCAAATTAAAAA+GGG | + | chr3_3:81984308-81984327 | None:intergenic | 35.0% | |
| !!! | CCCTTTTTAATTTGCTTTGC+CGG | - | chr3_3:81984305-81984324 | Msa0477670:CDS | 35.0% |
| ! | TTCACATTTTGTTGAAGGGA+AGG | - | chr3_3:81984338-81984357 | Msa0477670:CDS | 35.0% |
| !! | CATTTGAAAACATAGTGGGT+GGG | + | chr3_3:81984431-81984450 | None:intergenic | 35.0% |
| ! | TCATTTGAAAACATAGTGGG+TGG | + | chr3_3:81984432-81984451 | None:intergenic | 35.0% |
| ! | ACCCACTATGTTTTCAAATG+AGG | - | chr3_3:81984431-81984450 | Msa0477670:CDS | 35.0% |
| CCCTCATTTGAAAACATAGT+GGG | + | chr3_3:81984435-81984454 | None:intergenic | 35.0% | |
| ! | CCCACTATGTTTTCAAATGA+GGG | - | chr3_3:81984432-81984451 | Msa0477670:CDS | 35.0% |
| ACAGCGTTCAGCAATAAATA+AGG | + | chr3_3:81984529-81984548 | None:intergenic | 35.0% | |
| TTATTGCTGAACGCTGTTAA+TGG | - | chr3_3:81984532-81984551 | Msa0477670:CDS | 35.0% | |
| ATGTAGATTAATGATACGGC+TGG | - | chr3_3:81984590-81984609 | Msa0477670:CDS | 35.0% | |
| TGTAGATTAATGATACGGCT+GGG | - | chr3_3:81984591-81984610 | Msa0477670:CDS | 35.0% | |
| CGCAGTATCCAAACAGATTA+GGG | + | chr3_3:81978740-81978759 | None:intergenic | 40.0% | |
| CCTAATCTGTTTGGATACTG+CGG | - | chr3_3:81978738-81978757 | Msa0477670:three_prime_UTR | 40.0% | |
| !!! | AACGAAGGTTTTGACTGGAT+CGG | + | chr3_3:81978864-81978883 | None:intergenic | 40.0% |
| !! | TGAACAACGAAGGTTTTGAC+TGG | + | chr3_3:81978869-81978888 | None:intergenic | 40.0% |
| CATTCTTCTCTCTGATGTGA+CGG | + | chr3_3:81978898-81978917 | None:intergenic | 40.0% | |
| CTTGAAGAAACGGTCAGATA+GGG | + | chr3_3:81978960-81978979 | None:intergenic | 40.0% | |
| ATGGTGTGTCCTTGAAGAAA+CGG | + | chr3_3:81978970-81978989 | None:intergenic | 40.0% | |
| !! | CTCTTTCAGGTTGTTCTTCA+TGG | - | chr3_3:81979136-81979155 | Msa0477670:exon | 40.0% |
| ATATGCAGCTTCCGAATCAA+TGG | - | chr3_3:81979167-81979186 | Msa0477670:intron | 40.0% | |
| !! | GAATCAATGGCTTTGGGATA+TGG | - | chr3_3:81979180-81979199 | Msa0477670:intron | 40.0% |
| TCTCTTGAAACAGTTCGATC+AGG | - | chr3_3:81979282-81979301 | Msa0477670:intron | 40.0% | |
| ! | TATCAGAGGTAGGGTTTGTT+TGG | - | chr3_3:81979390-81979409 | Msa0477670:CDS | 40.0% |
| CATAAACACTTACGAGACTC+TGG | - | chr3_3:81979684-81979703 | Msa0477670:intron | 40.0% | |
| GTCACAAGTGTTTATGCCAA+TGG | + | chr3_3:81979740-81979759 | None:intergenic | 40.0% | |
| TTGAGAGAACACATGAAGAC+AGG | - | chr3_3:81979765-81979784 | Msa0477670:intron | 40.0% | |
| CAGCTATGGAACACATCATA+AGG | + | chr3_3:81979973-81979992 | None:intergenic | 40.0% | |
| !! | GAGTCAAGTTGGAAAACTTG+TGG | + | chr3_3:81980010-81980029 | None:intergenic | 40.0% |
| CGTTGCAACGTAATTCTAAG+AGG | + | chr3_3:81980241-81980260 | None:intergenic | 40.0% | |
| CTAATTTACGTTGAGTCGCA+AGG | + | chr3_3:81980266-81980285 | None:intergenic | 40.0% | |
| GGACCGACCGAAAATTATAA+AGG | - | chr3_3:81980425-81980444 | Msa0477670:intron | 40.0% | |
| ! | TTTTTACATTGGCCCAAGTC+GGG | - | chr3_3:81980495-81980514 | Msa0477670:intron | 40.0% |
| GATGGCTATGATTACAATGG+TGG | - | chr3_3:81980781-81980800 | Msa0477670:CDS | 40.0% | |
| ! | TTGGGGTATTTCAGTATGGT+TGG | - | chr3_3:81980823-81980842 | Msa0477670:CDS | 40.0% |
| ! | AGTGGTAAATGGTGGTAATG+TGG | + | chr3_3:81980954-81980973 | None:intergenic | 40.0% |
| GGCAAAACCATAGTGGTAAA+TGG | + | chr3_3:81980965-81980984 | None:intergenic | 40.0% | |
| GCAAGCAAGCAATTGATTAG+TGG | + | chr3_3:81981015-81981034 | None:intergenic | 40.0% | |
| CACATATCCACAAACGGAAT+GGG | - | chr3_3:81981277-81981296 | Msa0477670:intron | 40.0% | |
| TAGAAATCCCATTCCGTTTG+TGG | + | chr3_3:81981287-81981306 | None:intergenic | 40.0% | |
| !!! | CTGTTCTTTCTGGGGTTTTT+AGG | - | chr3_3:81981310-81981329 | Msa0477670:intron | 40.0% |
| ! | TTTAAGCATCTTTGAGGGGA+GGG | + | chr3_3:81981451-81981470 | None:intergenic | 40.0% |
| ! | ATTTAAGCATCTTTGAGGGG+AGG | + | chr3_3:81981452-81981471 | None:intergenic | 40.0% |
| TCAAGCATCTTATAGGGAAG+GGG | - | chr3_3:81982068-81982087 | Msa0477670:intron | 40.0% | |
| ATTTCAACATAAGAGGGGAG+GGG | - | chr3_3:81982127-81982146 | Msa0477670:intron | 40.0% | |
| TTATGTGTGCTTTCCCTTCT+TGG | - | chr3_3:81982234-81982253 | Msa0477670:intron | 40.0% | |
| TATGTGTGCTTTCCCTTCTT+GGG | - | chr3_3:81982235-81982254 | Msa0477670:intron | 40.0% | |
| ! | TAGCCTTTTCTACAGATACG+TGG | - | chr3_3:81982290-81982309 | Msa0477670:intron | 40.0% |
| CATCCACGTATCTGTAGAAA+AGG | + | chr3_3:81982296-81982315 | None:intergenic | 40.0% | |
| CATATTGTGGAGACTTCTGA+TGG | + | chr3_3:81982371-81982390 | None:intergenic | 40.0% | |
| TGAACAAATGTATGCGTTGC+TGG | - | chr3_3:81982410-81982429 | Msa0477670:intron | 40.0% | |
| TTCATCAACAAGCCTGCTTT+GGG | + | chr3_3:81982457-81982476 | None:intergenic | 40.0% | |
| TTTCATCAACAAGCCTGCTT+TGG | + | chr3_3:81982458-81982477 | None:intergenic | 40.0% | |
| CTGAAGGGGTAATAAACTTG+GGG | + | chr3_3:81982587-81982606 | None:intergenic | 40.0% | |
| GCTGAAGGGGTAATAAACTT+GGG | + | chr3_3:81982588-81982607 | None:intergenic | 40.0% | |
| ACTAGAGGCTCTTCAAAACT+GGG | + | chr3_3:81982612-81982631 | None:intergenic | 40.0% | |
| TACTAGAGGCTCTTCAAAAC+TGG | + | chr3_3:81982613-81982632 | None:intergenic | 40.0% | |
| GCCTCTAGTAAATTACAACC+AGG | - | chr3_3:81982623-81982642 | Msa0477670:CDS | 40.0% | |
| TTAGACTCCATCTGTGATCT+TGG | - | chr3_3:81982657-81982676 | Msa0477670:CDS | 40.0% | |
| CACTCACTCAAAATGCTCTA+TGG | + | chr3_3:81982690-81982709 | None:intergenic | 40.0% | |
| AGAGAGAGAGAGAGAAAACA+AGG | + | chr3_3:81982777-81982796 | None:intergenic | 40.0% | |
| !! | TTATGCAGCTTTTTGGGAGA+TGG | + | chr3_3:81982879-81982898 | None:intergenic | 40.0% |
| CTCTGAGCCTTCTATGTTAA+TGG | - | chr3_3:81983125-81983144 | Msa0477670:intron | 40.0% | |
| TCTAAACAACGACAGCTGAT+GGG | + | chr3_3:81983191-81983210 | None:intergenic | 40.0% | |
| ATCTAAACAACGACAGCTGA+TGG | + | chr3_3:81983192-81983211 | None:intergenic | 40.0% | |
| TTAAAAGGGGGGAATTGGAA+AGG | + | chr3_3:81983227-81983246 | None:intergenic | 40.0% | |
| TTGAAGTCTATACGCATCCT+GGG | + | chr3_3:81983278-81983297 | None:intergenic | 40.0% | |
| ATTGAAGTCTATACGCATCC+TGG | + | chr3_3:81983279-81983298 | None:intergenic | 40.0% | |
| AACAGTTGTTATCAGGTCTC+CGG | - | chr3_3:81983329-81983348 | Msa0477670:intron | 40.0% | |
| !! | TTTCCATTTTGATGCTTGGC+AGG | - | chr3_3:81983522-81983541 | Msa0477670:intron | 40.0% |
| AGAGAAAAGGATTAGGCAAG+AGG | + | chr3_3:81983660-81983679 | None:intergenic | 40.0% | |
| TACTGTTACCATCAAGACAC+AGG | + | chr3_3:81983771-81983790 | None:intergenic | 40.0% | |
| ACCAAGAAGCGAGTTAACAA+CGG | + | chr3_3:81983856-81983875 | None:intergenic | 40.0% | |
| TGGAGTCTAAACCTTCCAAA+CGG | - | chr3_3:81984017-81984036 | Msa0477670:intron | 40.0% | |
| TCTAAACCTTCCAAACGGTA+TGG | - | chr3_3:81984022-81984041 | Msa0477670:intron | 40.0% | |
| TAATCTCCATACCGTTTGGA+AGG | + | chr3_3:81984031-81984050 | None:intergenic | 40.0% | |
| GAAGTAATCTCCATACCGTT+TGG | + | chr3_3:81984035-81984054 | None:intergenic | 40.0% | |
| !! | GTCTTGTTTGCAGCTTGAAA+AGG | - | chr3_3:81984218-81984237 | Msa0477670:CDS | 40.0% |
| TGAAAAGGTGATCAACGAGA+TGG | - | chr3_3:81984233-81984252 | Msa0477670:CDS | 40.0% | |
| GCCGGCAAAGCAAATTAAAA+AGG | + | chr3_3:81984309-81984328 | None:intergenic | 40.0% | |
| GCCCTCATTTGAAAACATAG+TGG | + | chr3_3:81984436-81984455 | None:intergenic | 40.0% | |
| ACAACGCCTCAAAAGAAACA+TGG | + | chr3_3:81984495-81984514 | None:intergenic | 40.0% | |
| TACTGAGTAAGGATAGCTAG+CGG | + | chr3_3:81984645-81984664 | None:intergenic | 40.0% | |
| TGAGCATCACATACTGAGTA+AGG | + | chr3_3:81984656-81984675 | None:intergenic | 40.0% | |
| CCGCAGTATCCAAACAGATT+AGG | + | chr3_3:81978741-81978760 | None:intergenic | 45.0% | |
| GAGAGAGTGAAGGTAGCTTA+CGG | + | chr3_3:81978764-81978783 | None:intergenic | 45.0% | |
| AGCAGATTCAGAGAGAGTGA+AGG | + | chr3_3:81978774-81978793 | None:intergenic | 45.0% | |
| CTCTGAATCTGCTGTGACAA+TGG | - | chr3_3:81978781-81978800 | Msa0477670:three_prime_UTR | 45.0% | |
| !!! | ACGAAGGTTTTGACTGGATC+GGG | + | chr3_3:81978863-81978882 | None:intergenic | 45.0% |
| AGAAACGGTCAGATAGGGTT+TGG | + | chr3_3:81978955-81978974 | None:intergenic | 45.0% | |
| CCTTGAAGAAACGGTCAGAT+AGG | + | chr3_3:81978961-81978980 | None:intergenic | 45.0% | |
| CCTATCTGACCGTTTCTTCA+AGG | - | chr3_3:81978958-81978977 | Msa0477670:three_prime_UTR | 45.0% | |
| GTTTCTTCAAGGACACACCA+TGG | - | chr3_3:81978969-81978988 | Msa0477670:three_prime_UTR | 45.0% | |
| GGTAGAGAAGACAGAAGACA+TGG | + | chr3_3:81979033-81979052 | None:intergenic | 45.0% | |
| !! | TTCGTCAGAGAATCGATTCG+TGG | - | chr3_3:81979098-81979117 | Msa0477670:three_prime_UTR | 45.0% |
| !! | TCGTCAGAGAATCGATTCGT+GGG | - | chr3_3:81979099-81979118 | Msa0477670:three_prime_UTR | 45.0% |
| AGCTTCCGAATCAATGGCTT+TGG | - | chr3_3:81979173-81979192 | Msa0477670:intron | 45.0% | |
| GCTTCCGAATCAATGGCTTT+GGG | - | chr3_3:81979174-81979193 | Msa0477670:intron | 45.0% | |
| !! | GTCTTTTGCTGTCTTAGGCT+TGG | - | chr3_3:81980653-81980672 | Msa0477670:intron | 45.0% |
| GAGCAATTCACTGCAAACGA+TGG | - | chr3_3:81980763-81980782 | Msa0477670:intron | 45.0% | |
| !! | TCAGTATGGTTGGTTTGCTG+AGG | - | chr3_3:81980833-81980852 | Msa0477670:CDS | 45.0% |
| !! | CAGTATGGTTGGTTTGCTGA+GGG | - | chr3_3:81980834-81980853 | Msa0477670:CDS | 45.0% |
| CTGAGGGTTCATTGTCTCTT+GGG | - | chr3_3:81980850-81980869 | Msa0477670:CDS | 45.0% | |
| CTCTTGGGTGATTATCACAC+TGG | - | chr3_3:81980865-81980884 | Msa0477670:CDS | 45.0% | |
| ACGGCCATTCAAGTGATACA+AGG | + | chr3_3:81981166-81981185 | None:intergenic | 45.0% | |
| GCACATATCCACAAACGGAA+TGG | - | chr3_3:81981276-81981295 | Msa0477670:intron | 45.0% | |
| ! | TTAAGCATCTTTGAGGGGAG+GGG | + | chr3_3:81981450-81981469 | None:intergenic | 45.0% |
| AAGTTTCTCTCTCAAGGGAG+GGG | + | chr3_3:81981553-81981572 | None:intergenic | 45.0% | |
| CAAGTTTCTCTCTCAAGGGA+GGG | + | chr3_3:81981554-81981573 | None:intergenic | 45.0% | |
| TCAAGTTTCTCTCTCAAGGG+AGG | + | chr3_3:81981555-81981574 | None:intergenic | 45.0% | |
| ! | ATTCAAGCATCTTTGAGGGG+AGG | - | chr3_3:81982156-81982175 | Msa0477670:intron | 45.0% |
| ! | TTCAAGCATCTTTGAGGGGA+GGG | - | chr3_3:81982157-81982176 | Msa0477670:intron | 45.0% |
| TCATCAACAAGCCTGCTTTG+GGG | + | chr3_3:81982456-81982475 | None:intergenic | 45.0% | |
| TCTCAGTTGCGAGAGAAGTA+TGG | - | chr3_3:81982486-81982505 | Msa0477670:CDS | 45.0% | |
| CGCTGAAGGGGTAATAAACT+TGG | + | chr3_3:81982589-81982608 | None:intergenic | 45.0% | |
| TCCATCTGTGATCTTGGTTC+TGG | - | chr3_3:81982663-81982682 | Msa0477670:CDS | 45.0% | |
| TCCAGAACCAAGATCACAGA+TGG | + | chr3_3:81982667-81982686 | None:intergenic | 45.0% | |
| AGAAGGCTCAGAGTCAATAG+AGG | + | chr3_3:81983118-81983137 | None:intergenic | 45.0% | |
| TGAAGTCTATACGCATCCTG+GGG | + | chr3_3:81983277-81983296 | None:intergenic | 45.0% | |
| AGTCCTGCCAAGCATCAAAA+TGG | + | chr3_3:81983528-81983547 | None:intergenic | 45.0% | |
| !! | ACTCATGCTGTTGATAGTGC+TGG | - | chr3_3:81983572-81983591 | Msa0477670:intron | 45.0% |
| TTTCTGGGCCACATAAACAC+AGG | - | chr3_3:81983727-81983746 | Msa0477670:intron | 45.0% | |
| ACCGTTGTTAACTCGCTTCT+TGG | - | chr3_3:81983852-81983871 | Msa0477670:intron | 45.0% | |
| TGTTAACTCGCTTCTTGGTC+AGG | - | chr3_3:81983857-81983876 | Msa0477670:intron | 45.0% | |
| GCAGGACACAATTCATGTTG+TGG | - | chr3_3:81983997-81984016 | Msa0477670:intron | 45.0% | |
| TGGAGATTACTTCTTGCGTC+AGG | - | chr3_3:81984042-81984061 | Msa0477670:intron | 45.0% | |
| ! | CTTCTTGCGTCAGGTTGTTA+AGG | - | chr3_3:81984051-81984070 | Msa0477670:intron | 45.0% |
| ! | TGCGTCAGGTTGTTAAGGTA+TGG | - | chr3_3:81984056-81984075 | Msa0477670:intron | 45.0% |
| CAAGCTGCAAACAAGACAGA+CGG | + | chr3_3:81984215-81984234 | None:intergenic | 45.0% | |
| CGAGATGGACAGTATAAAGC+TGG | - | chr3_3:81984248-81984267 | Msa0477670:CDS | 45.0% | |
| !! | CTGGAGTGAGTTGATGTACT+TGG | - | chr3_3:81984267-81984286 | Msa0477670:CDS | 45.0% |
| GATGTACTTGGCACCCTTAT+CGG | - | chr3_3:81984279-81984298 | Msa0477670:CDS | 45.0% | |
| !!! | ATAATAAGATAATAATTTTT+CGG | + | chr3_3:81980457-81980476 | None:intergenic | 5.0% |
| !!! | ACATATTTTAATTTTATTTT+GGG | + | chr3_3:81981810-81981829 | None:intergenic | 5.0% |
| !! | AAGTAATTTATATATTAAAA+GGG | + | chr3_3:81983241-81983260 | None:intergenic | 5.0% |
| !! | TAAGTAATTTATATATTAAA+AGG | + | chr3_3:81983242-81983261 | None:intergenic | 5.0% |
| !! | TTGTTTATTAAATATATATT+TGG | - | chr3_3:81983480-81983499 | Msa0477670:intron | 5.0% |
| ACTGGATCGGGAACGAAGTT+GGG | + | chr3_3:81978851-81978870 | None:intergenic | 50.0% | |
| ACGGTAGAGGTGAACAACGA+AGG | + | chr3_3:81978879-81978898 | None:intergenic | 50.0% | |
| TCTCTCTGATGTGACGGTAG+AGG | + | chr3_3:81978892-81978911 | None:intergenic | 50.0% | |
| GTATTGAGCGACAGCGTCTA+CGG | + | chr3_3:81978999-81979018 | None:intergenic | 50.0% | |
| GTCTTCTCTACCGTGAGATG+TGG | - | chr3_3:81979041-81979060 | Msa0477670:three_prime_UTR | 50.0% | |
| TAGGAGTGAGACGAGCATAG+AGG | + | chr3_3:81979075-81979094 | None:intergenic | 50.0% | |
| TCGATTCTCTGACGAAGCGT+AGG | + | chr3_3:81979094-81979113 | None:intergenic | 50.0% | |
| AGACTCTGGGCCTGTTTGAA+TGG | - | chr3_3:81979698-81979717 | Msa0477670:intron | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | + | chr3_3:81980510-81980529 | None:intergenic | 50.0% | |
| AAATTTGTCCGGTCCCGACT+TGG | + | chr3_3:81980511-81980530 | None:intergenic | 50.0% | |
| TCAGATACTCGAGCAGGAGA+AGG | - | chr3_3:81980732-81980751 | Msa0477670:intron | 50.0% | |
| ATACTCGAGCAGGAGAAGGA+AGG | - | chr3_3:81980736-81980755 | Msa0477670:intron | 50.0% | |
| TACTCGAGCAGGAGAAGGAA+GGG | - | chr3_3:81980737-81980756 | Msa0477670:intron | 50.0% | |
| GCTGAGGGTTCATTGTCTCT+TGG | - | chr3_3:81980849-81980868 | Msa0477670:CDS | 50.0% | |
| ! | TCACACTGGTCTCAAGTGCT+TGG | - | chr3_3:81980879-81980898 | Msa0477670:CDS | 50.0% |
| TTGCCAATCTTATGCTCCGC+AGG | - | chr3_3:81980980-81980999 | Msa0477670:CDS | 50.0% | |
| TGACCTGCGGAGCATAAGAT+TGG | + | chr3_3:81980986-81981005 | None:intergenic | 50.0% | |
| TTAGTGGAAGTCGTGACCTG+CGG | + | chr3_3:81980999-81981018 | None:intergenic | 50.0% | |
| ! | TCAAGCATCTTTGAGGGGAG+GGG | - | chr3_3:81982158-81982177 | Msa0477670:intron | 50.0% |
| CATCAACAAGCCTGCTTTGG+GGG | + | chr3_3:81982455-81982474 | None:intergenic | 50.0% | |
| !! | TTCAAAACTGGGCGCTGAAG+GGG | + | chr3_3:81982601-81982620 | None:intergenic | 50.0% |
| !! | CTTCAAAACTGGGCGCTGAA+GGG | + | chr3_3:81982602-81982621 | None:intergenic | 50.0% |
| !! | TCTTCAAAACTGGGCGCTGA+AGG | + | chr3_3:81982603-81982622 | None:intergenic | 50.0% |
| !! | GCTTTTTGGGAGATGGAGCT+AGG | + | chr3_3:81982872-81982891 | None:intergenic | 50.0% |
| CTGATTCTCGCCTTCAAGCT+AGG | + | chr3_3:81983899-81983918 | None:intergenic | 50.0% | |
| CTAGCTTGAAGGCGAGAATC+AGG | - | chr3_3:81983897-81983916 | Msa0477670:intron | 50.0% | |
| GAAGGCGAGAATCAGGCTTT+AGG | - | chr3_3:81983904-81983923 | Msa0477670:intron | 50.0% | |
| GTATGGTTGCGTCTCCTTTG+CGG | - | chr3_3:81984073-81984092 | Msa0477670:intron | 50.0% | |
| CGTCTCCAAGCTCAAGACCT+AGG | - | chr3_3:81978818-81978837 | Msa0477670:three_prime_UTR | 55.0% | |
| CGTAGCCTAGGTCTTGAGCT+TGG | + | chr3_3:81978826-81978845 | None:intergenic | 55.0% | |
| CGAAGTTGGGATCGTAGCCT+AGG | + | chr3_3:81978838-81978857 | None:intergenic | 55.0% | |
| GACTGGATCGGGAACGAAGT+TGG | + | chr3_3:81978852-81978871 | None:intergenic | 55.0% | |
| GGTGGCGAAACCACATCTCA+CGG | + | chr3_3:81979054-81979073 | None:intergenic | 55.0% | |
| GAGTGAGACGAGCATAGAGG+TGG | + | chr3_3:81979072-81979091 | None:intergenic | 55.0% | |
| ACGGCTGGGCCTTTCAAAAG+CGG | - | chr3_3:81984605-81984624 | Msa0477670:exon | 55.0% | |
| !! | GCGACTCCTCCGCTTTTGAA+AGG | + | chr3_3:81984617-81984636 | None:intergenic | 55.0% |
| TGAGCGACAGCGTCTACGGA+GGG | + | chr3_3:81978995-81979014 | None:intergenic | 60.0% | |
| TTGAGCGACAGCGTCTACGG+AGG | + | chr3_3:81978996-81979015 | None:intergenic | 60.0% | |
| ACATTGGCCCAAGTCGGGAC+CGG | - | chr3_3:81980500-81980519 | Msa0477670:intron | 60.0% | |
| GCTGGGCCTTTCAAAAGCGG+AGG | - | chr3_3:81984608-81984627 | Msa0477670:exon | 60.0% | |
| ACAGCGTCTACGGAGGGCCA+TGG | + | chr3_3:81978989-81979008 | None:intergenic | 65.0% | |
| !! | GCTTTGGGGGCAGAGCGAGA+GGG | + | chr3_3:81982442-81982461 | None:intergenic | 65.0% |
| !! | TGCTTTGGGGGCAGAGCGAG+AGG | + | chr3_3:81982443-81982462 | None:intergenic | 65.0% |
| TCTCGCTCTGCCCCCAAAGC+AGG | - | chr3_3:81982442-81982461 | Msa0477670:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 81978696 | 81984720 | 81978696 | ID=Msa0477670;Name=Msa0477670 |
| chr3_3 | mRNA | 81978696 | 81984720 | 81978696 | ID=Msa0477670-mRNA-1;Parent=Msa0477670;Name=Msa0477670-mRNA-1;_AED=0.03;_eAED=0.03;_QI=104|0.71|0.87|0.87|1|1|8|445|526 |
| chr3_3 | exon | 81978696 | 81979185 | 81978696 | ID=Msa0477670-mRNA-1:exon:22698;Parent=Msa0477670-mRNA-1 |
| chr3_3 | exon | 81979344 | 81979415 | 81979344 | ID=Msa0477670-mRNA-1:exon:22697;Parent=Msa0477670-mRNA-1 |
| chr3_3 | exon | 81979779 | 81979872 | 81979779 | ID=Msa0477670-mRNA-1:exon:22696;Parent=Msa0477670-mRNA-1 |
| chr3_3 | exon | 81979988 | 81980136 | 81979988 | ID=Msa0477670-mRNA-1:exon:22695;Parent=Msa0477670-mRNA-1 |
| chr3_3 | exon | 81980258 | 81980302 | 81980258 | ID=Msa0477670-mRNA-1:exon:22694;Parent=Msa0477670-mRNA-1 |
| chr3_3 | exon | 81980772 | 81981111 | 81980772 | ID=Msa0477670-mRNA-1:exon:22693;Parent=Msa0477670-mRNA-1 |
| chr3_3 | exon | 81982415 | 81982746 | 81982415 | ID=Msa0477670-mRNA-1:exon:22692;Parent=Msa0477670-mRNA-1 |
| chr3_3 | exon | 81984113 | 81984720 | 81984113 | ID=Msa0477670-mRNA-1:exon:22691;Parent=Msa0477670-mRNA-1 |
| chr3_3 | five_prime_UTR | 81984617 | 81984720 | 81984617 | ID=Msa0477670-mRNA-1:five_prime_utr;Parent=Msa0477670-mRNA-1 |
| chr3_3 | CDS | 81984113 | 81984616 | 81984113 | ID=Msa0477670-mRNA-1:cds;Parent=Msa0477670-mRNA-1 |
| chr3_3 | CDS | 81982415 | 81982746 | 81982415 | ID=Msa0477670-mRNA-1:cds;Parent=Msa0477670-mRNA-1 |
| chr3_3 | CDS | 81980772 | 81981111 | 81980772 | ID=Msa0477670-mRNA-1:cds;Parent=Msa0477670-mRNA-1 |
| chr3_3 | CDS | 81980258 | 81980302 | 81980258 | ID=Msa0477670-mRNA-1:cds;Parent=Msa0477670-mRNA-1 |
| chr3_3 | CDS | 81979988 | 81980136 | 81979988 | ID=Msa0477670-mRNA-1:cds;Parent=Msa0477670-mRNA-1 |
| chr3_3 | CDS | 81979779 | 81979872 | 81979779 | ID=Msa0477670-mRNA-1:cds;Parent=Msa0477670-mRNA-1 |
| chr3_3 | CDS | 81979344 | 81979415 | 81979344 | ID=Msa0477670-mRNA-1:cds;Parent=Msa0477670-mRNA-1 |
| chr3_3 | CDS | 81979141 | 81979185 | 81979141 | ID=Msa0477670-mRNA-1:cds;Parent=Msa0477670-mRNA-1 |
| chr3_3 | three_prime_UTR | 81978696 | 81979140 | 81978696 | ID=Msa0477670-mRNA-1:three_prime_utr;Parent=Msa0477670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
