AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0731780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0731780 MtrunA17_Chr5g0426311 96.503 286 6 2 1 285 1 283 0.0 543
Msa0731780 MtrunA17_Chr3g0144311 59.694 196 71 5 7 200 20 209 6.98e-61 194
Msa0731780 MtrunA17_Chr4g0017401 64.800 125 31 4 9 120 9 133 1.65e-47 159
Msa0731780 MtrunA17_Chr8g0346011 77.273 88 20 0 7 94 28 115 1.16e-45 155
Msa0731780 MtrunA17_Chr7g0276531 73.333 90 24 0 8 97 10 99 1.13e-44 152
Msa0731780 MtrunA17_Chr3g0127751 69.565 92 27 1 8 99 18 108 1.81e-41 143
Msa0731780 MtrunA17_Chr2g0290191 40.367 109 49 3 17 110 5 112 1.88e-21 93.6
Msa0731780 MtrunA17_Chr2g0290191 29.530 149 94 3 17 158 107 251 2.99e-13 69.7
Msa0731780 MtrunA17_Chr4g0045921 48.193 83 43 0 12 94 72 154 2.04e-18 84.0
Msa0731780 MtrunA17_Chr8g0360551 44.578 83 46 0 12 94 69 151 3.48e-18 84.0
Msa0731780 MtrunA17_Chr8g0360551 32.500 120 73 2 12 124 161 279 4.57e-13 68.9
Msa0731780 MtrunA17_Chr3g0101061 38.750 80 48 1 5 84 29 107 7.59e-18 83.2
Msa0731780 MtrunA17_Chr7g0255011 41.667 84 49 0 11 94 122 205 4.80e-17 80.9
Msa0731780 MtrunA17_Chr1g0186351 38.750 80 48 1 12 91 2 80 4.93e-16 77.8
Msa0731780 MtrunA17_Chr4g0035051 44.595 74 40 1 17 89 9 82 8.70e-16 72.0
Msa0731780 MtrunA17_Chr5g0440831 39.759 83 50 0 12 94 161 243 9.89e-16 77.0
Msa0731780 MtrunA17_Chr7g0219021 42.169 83 46 2 17 98 41 122 5.43e-15 73.2
Msa0731780 MtrunA17_Chr2g0278661 41.892 74 42 1 12 84 3 76 8.26e-15 72.4
Msa0731780 MtrunA17_Chr4g0035031 43.421 76 42 1 17 91 9 84 2.78e-14 69.7
Msa0731780 MtrunA17_Chr5g0447761 40.000 75 44 1 17 91 7 80 2.94e-14 72.4
Msa0731780 MtrunA17_Chr3g0121631 40.580 69 41 0 16 84 36 104 1.64e-13 66.6
Msa0731780 MtrunA17_Chr4g0035001 41.892 74 42 1 17 89 7 80 1.96e-13 66.6
Msa0731780 MtrunA17_Chr4g0061451 40.964 83 47 2 16 97 42 123 3.23e-13 68.2
Msa0731780 MtrunA17_Chr4g0031091 42.254 71 40 1 16 85 33 103 6.54e-13 63.9
Msa0731780 MtrunA17_Chr3g0119311 37.037 81 41 2 16 96 36 106 1.00e-12 64.3
Msa0731780 MtrunA17_Chr4g0050781 42.029 69 39 1 17 84 8 76 1.02e-12 65.9
Msa0731780 MtrunA17_Chr3g0086861 40.449 89 51 2 10 97 38 125 1.32e-12 67.4
Msa0731780 MtrunA17_Chr1g0210241 34.940 83 50 1 16 98 7 85 1.51e-12 66.2
Msa0731780 MtrunA17_Chr7g0266751 34.831 89 54 1 17 105 33 117 2.75e-12 63.2
Msa0731780 MtrunA17_Chr3g0135111 37.500 80 49 1 12 91 6 84 8.58e-12 64.7
Msa0731780 MtrunA17_Chr7g0219031 42.424 66 37 1 17 81 41 106 3.41e-11 59.3
Msa0731780 MtrunA17_Chr3g0120721 34.722 72 46 1 17 88 19 89 7.33e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0731780 AT1G22330.1 65.534 206 51 7 5 202 6 199 3.69e-64 203
Msa0731780 AT1G78260.1 54.297 256 82 9 5 234 6 252 3.21e-58 188
Msa0731780 AT1G78260.2 57.422 256 74 9 5 234 6 252 8.13e-58 186
Msa0731780 AT1G76460.1 49.351 231 88 8 5 216 12 232 4.87e-54 177
Msa0731780 AT1G20880.2 43.206 287 129 10 5 281 12 274 4.99e-51 169
Msa0731780 AT1G20880.3 43.206 287 129 10 5 281 12 274 4.99e-51 169
Msa0731780 AT1G20880.1 43.206 287 129 10 5 281 12 274 4.99e-51 169
Msa0731780 AT1G33470.3 52.229 157 70 4 12 166 3 156 2.78e-46 155
Msa0731780 AT1G33470.1 52.229 157 70 4 12 166 3 156 2.89e-46 156
Msa0731780 AT2G46780.1 48.731 197 79 8 12 191 18 209 6.04e-45 155
Msa0731780 AT2G46780.2 48.731 197 79 8 12 191 18 209 6.04e-45 155
Msa0731780 AT1G33470.2 52.980 151 66 4 12 160 3 150 8.42e-45 152
Msa0731780 AT1G22910.2 69.388 98 28 1 10 105 7 104 1.78e-43 149
Msa0731780 AT1G22910.1 69.388 98 28 1 10 105 7 104 4.77e-43 147
Msa0731780 AT1G22910.3 67.308 104 27 2 10 111 7 105 8.61e-43 150
Msa0731780 AT3G54770.1 66.304 92 30 1 10 100 11 102 1.48e-37 134
Msa0731780 AT3G54770.3 66.304 92 30 1 10 100 11 102 1.81e-37 134
Msa0731780 AT5G11412.1 58.889 90 37 0 5 94 41 130 9.32e-35 124
Msa0731780 AT5G53680.1 49.000 100 47 2 5 101 3 101 1.66e-29 110
Msa0731780 AT5G53720.1 54.430 79 36 0 16 94 9 87 1.18e-25 98.2
Msa0731780 AT3G06970.1 47.423 97 50 1 12 107 8 104 1.19e-25 103
Msa0731780 AT3G54770.2 66.176 68 22 1 32 98 1 68 8.67e-25 99.4
Msa0731780 AT5G47620.1 47.826 69 35 1 16 84 6 73 2.42e-18 84.7
Msa0731780 AT5G47620.2 47.826 69 35 1 16 84 6 73 2.42e-18 84.7
Msa0731780 AT5G47620.5 47.826 69 35 1 16 84 6 73 2.42e-18 84.7
Msa0731780 AT5G47620.4 47.826 69 35 1 16 84 6 73 2.93e-18 84.7
Msa0731780 AT2G22090.1 43.373 83 47 0 12 94 100 182 1.40e-17 82.0
Msa0731780 AT2G22090.2 43.373 83 47 0 12 94 100 182 1.41e-17 82.0
Msa0731780 AT3G15010.1 45.783 83 45 0 12 94 71 153 3.05e-17 81.6
Msa0731780 AT3G15010.1 33.571 140 77 3 8 132 159 297 7.74e-16 77.4
Msa0731780 AT3G15010.2 45.783 83 45 0 12 94 71 153 3.05e-17 81.6
Msa0731780 AT3G15010.2 33.571 140 77 3 8 132 159 297 7.74e-16 77.4
Msa0731780 AT4G26650.1 41.667 72 41 1 13 84 12 82 3.18e-17 81.6
Msa0731780 AT4G26650.2 41.667 72 41 1 13 84 9 79 3.37e-17 81.6
Msa0731780 AT4G39260.3 40.625 96 45 3 17 111 7 91 4.69e-17 75.1
Msa0731780 AT5G55550.5 41.096 73 42 1 12 84 2 73 5.34e-17 80.9
Msa0731780 AT5G55550.4 41.096 73 42 1 12 84 2 73 5.34e-17 80.9
Msa0731780 AT5G55550.9 41.096 73 42 1 12 84 2 73 5.34e-17 80.9
Msa0731780 AT5G55550.7 41.096 73 42 1 12 84 2 73 5.34e-17 80.9
Msa0731780 AT5G55550.1 41.096 73 42 1 12 84 2 73 5.34e-17 80.9
Msa0731780 AT5G55550.8 41.096 73 42 1 12 84 2 73 6.50e-17 80.9
Msa0731780 AT5G55550.2 41.096 73 42 1 12 84 2 73 6.61e-17 80.9
Msa0731780 AT5G55550.3 41.096 73 42 1 12 84 2 73 6.61e-17 80.9
Msa0731780 AT5G55550.6 41.096 73 42 1 12 84 2 73 6.61e-17 80.9
Msa0731780 AT5G55550.11 41.096 73 42 1 12 84 2 73 6.61e-17 80.9
Msa0731780 AT5G55550.10 41.096 73 42 1 12 84 2 73 7.35e-17 80.9
Msa0731780 AT4G39260.2 43.421 76 42 1 17 91 7 82 7.58e-17 75.5
Msa0731780 AT4G39260.1 43.421 76 42 1 17 91 7 82 2.08e-16 75.5
Msa0731780 AT4G13850.3 40.909 88 48 2 16 102 35 119 3.24e-16 74.3
Msa0731780 AT4G13850.2 40.909 88 48 2 16 102 35 119 4.00e-16 74.3
Msa0731780 AT2G41060.1 39.759 83 50 0 12 94 124 206 4.16e-16 78.6
Msa0731780 AT2G41060.3 39.759 83 50 0 12 94 124 206 4.16e-16 78.6
Msa0731780 AT2G41060.2 39.759 83 50 0 12 94 124 206 4.16e-16 78.6
Msa0731780 AT4G13850.1 40.909 88 48 2 16 102 35 119 4.48e-16 74.3
Msa0731780 AT3G23830.2 38.636 88 50 2 16 102 35 119 5.21e-16 73.6
Msa0731780 AT3G23830.1 38.636 88 50 2 16 102 35 119 5.21e-16 73.6
Msa0731780 AT4G39260.4 45.161 62 34 0 17 78 7 68 6.81e-16 72.4
Msa0731780 AT3G07810.1 40.000 75 44 1 17 91 7 80 3.24e-15 75.9
Msa0731780 AT3G07810.2 40.000 75 44 1 17 91 7 80 3.33e-15 75.9
Msa0731780 AT2G21660.2 42.683 82 45 2 11 91 4 84 4.59e-15 71.6
Msa0731780 AT2G21660.1 42.683 82 45 2 11 91 4 84 6.56e-15 71.6
Msa0731780 AT4G13850.4 41.667 72 38 1 16 87 35 102 7.73e-15 70.1
Msa0731780 AT3G56860.9 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.11 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.8 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.5 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.7 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.2 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.6 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.10 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.3 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.1 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT3G56860.4 39.759 83 50 0 12 94 136 218 9.39e-15 74.3
Msa0731780 AT2G33410.1 35.870 92 57 2 17 108 7 96 2.26e-14 73.2
Msa0731780 AT2G19380.1 39.506 81 49 0 12 92 404 484 2.37e-14 73.6
Msa0731780 AT4G14300.1 36.709 79 46 1 12 86 2 80 5.13e-14 72.0
Msa0731780 AT4G14300.2 36.709 79 46 1 12 86 2 80 5.13e-14 72.0
Msa0731780 AT1G17640.2 41.667 72 41 1 17 88 67 137 8.02e-14 71.2
Msa0731780 AT1G17640.1 41.667 72 41 1 17 88 67 137 8.02e-14 71.2
Msa0731780 AT1G17640.3 41.667 72 41 1 17 88 67 137 8.02e-14 71.2
Msa0731780 AT2G22100.1 34.940 83 54 0 6 88 153 235 1.59e-13 70.5
Msa0731780 AT3G26420.1 40.580 69 40 1 17 84 8 76 3.63e-12 65.5
Msa0731780 AT1G74230.1 37.662 77 48 0 16 92 34 110 1.07e-11 64.3
Msa0731780 AT5G04280.1 35.294 102 60 2 16 115 7 104 1.11e-11 64.7
Msa0731780 AT5G61030.2 33.333 78 48 1 16 93 40 113 1.55e-11 64.3
Msa0731780 AT5G61030.1 33.333 78 48 1 16 93 40 113 1.55e-11 64.3
Msa0731780 AT1G18630.1 41.429 70 40 1 16 84 36 105 1.70e-11 61.6
Msa0731780 AT1G22910.4 65.217 46 14 1 62 105 8 53 2.92e-11 62.0
Msa0731780 AT5G59865.1 48.980 49 25 0 16 64 26 74 3.31e-11 59.7
Msa0731780 AT3G13224.1 29.464 112 66 3 17 128 20 118 7.62e-11 61.2

Find 127 sgRNAs with CRISPR-Local

Find 585 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATTAATCAGTCCAAATT+TGG 0.164869 5_1:-43289897 None:intergenic
TCACTATGGCAATCCAAATT+TGG 0.198150 5_1:+43289884 Msa0731780:three_prime_UTR
CAATACTATCAACAACTTTA+TGG 0.198535 5_1:+43285819 Msa0731780:CDS
CCACATTATCGATCACAATT+TGG 0.217645 5_1:+43281596 Msa0731780:CDS
CTTCCATCAATTACTGGGTT+TGG 0.238742 5_1:-43281915 None:intergenic
GCTTCTCCTCCTTCTCTCTT+TGG 0.254321 5_1:+43281079 Msa0731780:five_prime_UTR
ATTTAGTGATTCTCTCCTAT+TGG 0.255682 5_1:+43281335 Msa0731780:five_prime_UTR
GGAGAAGGTTGCCTTATTAA+TGG 0.270286 5_1:-43286026 None:intergenic
GCTCTTCTTCCATCAATTAC+TGG 0.273226 5_1:-43281921 None:intergenic
ATGGGTTCACCATATTATTA+TGG 0.277771 5_1:+43285858 Msa0731780:CDS
ACTTGAGGGTACCCGTATTC+AGG 0.296691 5_1:-43285632 None:intergenic
TTTAGTGATTCTCTCCTATT+GGG 0.315114 5_1:+43281336 Msa0731780:five_prime_UTR
CAAGCCCTTCTAGCTGATTC+TGG 0.316155 5_1:-43281885 None:intergenic
CACTTCAACAACCATTAATA+AGG 0.322262 5_1:+43286015 Msa0731780:CDS
AGCTTGTATGCGATGTGGTT+GGG 0.337761 5_1:-43285925 None:intergenic
CCGTACGCCGCTGCTGCTCC+TGG 0.337919 5_1:-43283231 None:intergenic
GGACTGATTAATCAACTTCA+TGG 0.352176 5_1:+43289905 Msa0731780:three_prime_UTR
GCTCCTTCCATTGGTGTAGT+AGG 0.368922 5_1:-43285969 None:intergenic
AAAAGAGAGAGAGGTGGGTA+TGG 0.374440 5_1:-43281304 None:intergenic
CTCTTCTTCCATCAATTACT+GGG 0.374932 5_1:-43281920 None:intergenic
GATGATGTGGTATGGTTGTT+TGG 0.392913 5_1:-43281267 None:intergenic
ATAGAATAGCCATAATAATA+TGG 0.394438 5_1:-43285867 None:intergenic
CCCACCTACACTCCTGAATA+CGG 0.401412 5_1:+43285620 Msa0731780:CDS
GTGATCCAGAATCAGCTAGA+AGG 0.404501 5_1:+43281880 Msa0731780:CDS
CCAGTGATGTACCAACCATA+TGG 0.406669 5_1:+43283306 Msa0731780:CDS
GGCAGGAGGGCCACCACAAA+TGG 0.409472 5_1:+43283263 Msa0731780:CDS
TGTAGTAGGGTAGTATAGAT+AGG 0.410340 5_1:-43285955 None:intergenic
AATTGTAACATTGCTTCTCT+TGG 0.414331 5_1:+43281945 Msa0731780:CDS
AAGAGAAAAGAGAGAGAGGT+GGG 0.426595 5_1:-43281309 None:intergenic
CCTCTTGGTGGTGATGGTCT+AGG 0.428010 5_1:-43281972 None:intergenic
GCAAACACTAATATGCTTGC+TGG 0.433743 5_1:-43281102 None:intergenic
GTTGCTCCTCCTGCCATTTG+TGG 0.434650 5_1:-43283276 None:intergenic
AGCGGCGTACGGCGGTGTTC+CGG 0.436874 5_1:+43283242 Msa0731780:CDS
AGAGAAGGAGGAGAAGCTAA+TGG 0.440154 5_1:-43281073 None:intergenic
GATCCAAACCCAGTAATTGA+TGG 0.443686 5_1:+43281912 Msa0731780:CDS
GATTATACAAGTTGAAACTA+AGG 0.452228 5_1:-43289768 None:intergenic
CTCCTTCCATTGGTGTAGTA+GGG 0.454529 5_1:-43285968 None:intergenic
TAATTACCTCTTGGTGGTGA+TGG 0.454939 5_1:-43281978 None:intergenic
TGGACCATCATCTTCAACAA+TGG 0.459048 5_1:+43285839 Msa0731780:CDS
ATGACTTGTGTTCATCACTA+TGG 0.461889 5_1:+43289870 Msa0731780:three_prime_UTR
ACCTCATCAGAGACAGCATC+TGG 0.463906 5_1:+43289675 Msa0731780:CDS
CCAGGAGCAGCAGCGGCGTA+CGG 0.464291 5_1:+43283231 Msa0731780:CDS
TGGAGACACAACATTTACTA+AGG 0.466200 5_1:+43281616 Msa0731780:CDS
ATTATCACTGATAAGAATAC+AGG 0.469048 5_1:+43281725 Msa0731780:CDS
AGGAGCACCAGGAGCAGCAG+CGG 0.469301 5_1:+43283224 Msa0731780:CDS
GGAGGGCCACCACAAATGGC+AGG 0.475742 5_1:+43283267 Msa0731780:CDS
GGACCATCATCTTCAACAAT+GGG 0.476751 5_1:+43285840 Msa0731780:CDS
GGTGTGGGGACAGGAGCACC+AGG 0.477832 5_1:+43283213 Msa0731780:CDS
GTTAATAATATTTGATGCCA+TGG 0.484841 5_1:+43281568 Msa0731780:exon
TGAAATTAATTACCTCTTGG+TGG 0.486134 5_1:-43281984 None:intergenic
GAGAGAGAAGAGAGTAGTGG+AGG 0.489295 5_1:-43281165 None:intergenic
ATTTGTGGTGGCCCTCCTGC+CGG 0.491579 5_1:-43283261 None:intergenic
CAGCTTGTATGCGATGTGGT+TGG 0.492117 5_1:-43285926 None:intergenic
TATGTCCTCATTTCATCAGT+TGG 0.492209 5_1:-43281668 None:intergenic
GAGAAAGTTGCTCCTTCCAT+TGG 0.493319 5_1:-43285978 None:intergenic
ACATAGCTAACTTACCCATA+TGG 0.500625 5_1:-43283321 None:intergenic
TACGGCGGTGTTCCGGCAGG+AGG 0.505951 5_1:+43283249 Msa0731780:CDS
TATTGTGCTTGCTGAATCTG+TGG 0.514006 5_1:-43285801 None:intergenic
AAGAATACAGGAAAATCTAA+AGG 0.522577 5_1:+43281737 Msa0731780:CDS
GCTCCTCCTGCCATTTGTGG+TGG 0.523998 5_1:-43283273 None:intergenic
GCAGGGAGGGGTACATATCA+AGG 0.525507 5_1:+43283186 Msa0731780:intron
GCGTACGGCGGTGTTCCGGC+AGG 0.531532 5_1:+43283246 Msa0731780:CDS
AGGGGTACATATCAAGGTGG+GGG 0.532228 5_1:+43283192 Msa0731780:CDS
GTTGAAAATGTACCCCTTGG+TGG 0.534222 5_1:-43285900 None:intergenic
ACAGGAAAATCTAAAGGATA+CGG 0.534361 5_1:+43281743 Msa0731780:CDS
GCTTGTATGCGATGTGGTTG+GGG 0.534607 5_1:-43285924 None:intergenic
ATCAAGTGTACTACTACTCT+TGG 0.536002 5_1:-43281494 None:intergenic
CCATATGGTTGGTACATCAC+TGG 0.536103 5_1:-43283306 None:intergenic
AGTGAAAATGCTTGAAGACA+AGG 0.536284 5_1:-43289952 None:intergenic
TAAGAGAAAAGAGAGAGAGG+TGG 0.536604 5_1:-43281310 None:intergenic
CAACCACATCGCATACAAGC+TGG 0.537393 5_1:+43285927 Msa0731780:CDS
CAGTGATGTACCAACCATAT+GGG 0.538558 5_1:+43283307 Msa0731780:CDS
AAGAGGTGTTGTTGAATGGT+GGG 0.539075 5_1:+43281368 Msa0731780:five_prime_UTR
CCCGTATTCAGGAGTGTAGG+TGG 0.540062 5_1:-43285621 None:intergenic
ATAGAGAGAGAAGAGAGTAG+TGG 0.544647 5_1:-43281168 None:intergenic
CTTATTAATGGTTGTTGAAG+TGG 0.545928 5_1:-43286014 None:intergenic
AAAGATTACCACTAGGAGAA+GGG 0.546590 5_1:-43286052 None:intergenic
GAGGGGTACATATCAAGGTG+GGG 0.550871 5_1:+43283191 Msa0731780:CDS
ATTATACAAGTTGAAACTAA+GGG 0.550994 5_1:-43289767 None:intergenic
CCAAATTGTGATCGATAATG+TGG 0.553655 5_1:-43281596 None:intergenic
GAAAGATTACCACTAGGAGA+AGG 0.553884 5_1:-43286053 None:intergenic
GGGAGGGGTACATATCAAGG+TGG 0.557161 5_1:+43283189 Msa0731780:intron
CTAGGAGAAGGGGTAGGAGA+AGG 0.561216 5_1:-43286041 None:intergenic
TCGGAAAGTTCAAATACTCA+AGG 0.561904 5_1:+43289711 Msa0731780:CDS
AGCTAACTTACCCATATGGT+TGG 0.570433 5_1:-43283317 None:intergenic
AAGAAAGAGGTGTTGTTGAA+TGG 0.570970 5_1:+43281364 Msa0731780:five_prime_UTR
ATCTGGAGTAGTTATAACTT+CGG 0.572225 5_1:+43289692 Msa0731780:CDS
GGAGGGGTACATATCAAGGT+GGG 0.575240 5_1:+43283190 Msa0731780:CDS
ATTGTGCTTGCTGAATCTGT+GGG 0.576111 5_1:-43285800 None:intergenic
CCACCTACACTCCTGAATAC+GGG 0.576471 5_1:+43285621 Msa0731780:CDS
TGATCCAGAATCAGCTAGAA+GGG 0.577679 5_1:+43281881 Msa0731780:CDS
AAAGAGGTGTTGTTGAATGG+TGG 0.578458 5_1:+43281367 Msa0731780:five_prime_UTR
TGCTGGCCAAAGAGAGAAGG+AGG 0.581081 5_1:-43281085 None:intergenic
ATACTACCCTACTACACCAA+TGG 0.581425 5_1:+43285962 Msa0731780:CDS
GTAGGGTAGTATAGATAGGA+TGG 0.589808 5_1:-43285951 None:intergenic
CCGTATTCAGGAGTGTAGGT+GGG 0.589906 5_1:-43285620 None:intergenic
TCTCCTACCCCTTCTCCTAG+TGG 0.593229 5_1:+43286044 Msa0731780:CDS
AAGATTACCACTAGGAGAAG+GGG 0.593298 5_1:-43286051 None:intergenic
GGAGCAGCAGCGGCGTACGG+CGG 0.595180 5_1:+43283234 Msa0731780:CDS
AGAGGTGTTGTTGAATGGTG+GGG 0.600498 5_1:+43281369 Msa0731780:five_prime_UTR
TATGCAAGCAGCACCACCAA+GGG 0.604039 5_1:+43285887 Msa0731780:CDS
GGTGTTGAAAATGTACCCCT+TGG 0.604699 5_1:-43285903 None:intergenic
GCTTGCTGGCCAAAGAGAGA+AGG 0.606205 5_1:-43281088 None:intergenic
AAACTCCAACTGATGAAATG+AGG 0.611186 5_1:+43281663 Msa0731780:CDS
GAACCCATTGTTGAAGATGA+TGG 0.613054 5_1:-43285843 None:intergenic
CGGAAAGTTCAAATACTCAA+GGG 0.613076 5_1:+43289712 Msa0731780:CDS
GGGCCACCACAAATGGCAGG+AGG 0.622370 5_1:+43283270 Msa0731780:CDS
CGTATTCAGGAGTGTAGGTG+GGG 0.623905 5_1:-43285619 None:intergenic
AATATGATGATGATGTGGTA+TGG 0.625083 5_1:-43281275 None:intergenic
AATCTGTGGGTTATACATTG+TGG 0.625792 5_1:-43285787 None:intergenic
TCGATAATGTGGATAAGCCA+TGG 0.628868 5_1:-43281585 None:intergenic
ACGGCGGTGTTCCGGCAGGA+GGG 0.631360 5_1:+43283250 Msa0731780:CDS
TCCAGATGCTGTCTCTGATG+AGG 0.638137 5_1:-43289676 None:intergenic
TACCCTACTACACCAATGGA+AGG 0.640780 5_1:+43285966 Msa0731780:CDS
TATACAAGTTGAAACTAAGG+GGG 0.646004 5_1:-43289765 None:intergenic
TACAAGTTGAAACTAAGGGG+GGG 0.651376 5_1:-43289763 None:intergenic
TTATACAAGTTGAAACTAAG+GGG 0.653720 5_1:-43289766 None:intergenic
GTACCCGTATTCAGGAGTGT+AGG 0.661197 5_1:-43285624 None:intergenic
CTATGCAAGCAGCACCACCA+AGG 0.664787 5_1:+43285886 Msa0731780:CDS
AGTGATGAACACAAGTCATG+TGG 0.666369 5_1:-43289866 None:intergenic
TTATGAATATGATGATGATG+TGG 0.674344 5_1:-43281280 None:intergenic
ATACAAGTTGAAACTAAGGG+GGG 0.674891 5_1:-43289764 None:intergenic
CCTAGACCATCACCACCAAG+AGG 0.681390 5_1:+43281972 Msa0731780:CDS
CTATTGGGAAAAGAAGAAAG+AGG 0.683433 5_1:+43281351 Msa0731780:five_prime_UTR
TTACCACTAGGAGAAGGGGT+AGG 0.689545 5_1:-43286047 None:intergenic
GGTCCAGCTTGTATGCGATG+TGG 0.710376 5_1:-43285930 None:intergenic
ATGCAAGCAGCACCACCAAG+GGG 0.723319 5_1:+43285888 Msa0731780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAACAAAAAATATTTAAAA+GGG - chr5_1:43281222-43281241 None:intergenic 10.0%
!! ACAAACAAAAAATATTTAAA+AGG - chr5_1:43281223-43281242 None:intergenic 10.0%
!! ATATATTATAATGATGATTA+TGG - chr5_1:43281812-43281831 None:intergenic 10.0%
!! TAACTAAATAATTTAATCTA+AGG - chr5_1:43282357-43282376 None:intergenic 10.0%
!! AAATTATTTAGTTATTTAAC+CGG + chr5_1:43282363-43282382 Msa0731780:intron 10.0%
!!! ATTATCATTCTTTTTTTTTT+TGG + chr5_1:43282921-43282940 Msa0731780:intron 10.0%
!!! TAATATATTTTTTAGAGTAA+GGG - chr5_1:43283632-43283651 None:intergenic 10.0%
!!! TTAATATATTTTTTAGAGTA+AGG - chr5_1:43283633-43283652 None:intergenic 10.0%
!!! TAAATATTTCTTAAATTTTG+TGG + chr5_1:43283820-43283839 Msa0731780:intron 10.0%
!!! AAGTTATACATAAATTTTAT+AGG + chr5_1:43283972-43283991 Msa0731780:intron 10.0%
!! AGAAAATATTAAAAATAGAA+AGG + chr5_1:43284003-43284022 Msa0731780:intron 10.0%
!! GAAAATATTAAAAATAGAAA+GGG + chr5_1:43284004-43284023 Msa0731780:intron 10.0%
!! AAAATATTAAAAATAGAAAG+GGG + chr5_1:43284005-43284024 Msa0731780:intron 10.0%
!!! TATGAAAAATGTTTTTTTTA+AGG - chr5_1:43284622-43284641 None:intergenic 10.0%
!!! AATTAAAACTGAAAAATTTT+CGG - chr5_1:43286362-43286381 None:intergenic 10.0%
!!! GAAAAAAAAATTTTTTTTGA+AGG + chr5_1:43286466-43286485 Msa0731780:intron 10.0%
!!! TTTAATTTAATATTCAACTT+TGG + chr5_1:43286884-43286903 Msa0731780:intron 10.0%
!! AACAATAGTATTAAAATAAA+TGG - chr5_1:43289570-43289589 None:intergenic 10.0%
!!! ATTATATCTTCAATTTTTTT+CGG + chr5_1:43289842-43289861 Msa0731780:three_prime_UTR 10.0%
!! TTCATAAATAAAAACATTAG+TGG - chr5_1:43282024-43282043 None:intergenic 15.0%
!! TTAATATCACCATAAAAATT+AGG + chr5_1:43282849-43282868 Msa0731780:intron 15.0%
!! ATTAATAACAACATTTAGTA+GGG - chr5_1:43283113-43283132 None:intergenic 15.0%
!! AATTAATAACAACATTTAGT+AGG - chr5_1:43283114-43283133 None:intergenic 15.0%
!!! TGAAATGATAAAGTATATTT+TGG + chr5_1:43283144-43283163 Msa0731780:intron 15.0%
!!! TTTCATTATTTTTTAGAGTA+AGG - chr5_1:43283673-43283692 None:intergenic 15.0%
!! AAATATTAAAAATAGAAAGG+GGG + chr5_1:43284006-43284025 Msa0731780:intron 15.0%
!!! AAAAAATGATGATGATAAAT+AGG + chr5_1:43284117-43284136 Msa0731780:intron 15.0%
!! ACAATGTTAGATAATAAATA+TGG - chr5_1:43284536-43284555 None:intergenic 15.0%
!! ACTAAGTATATAGAATTTAT+TGG + chr5_1:43284806-43284825 Msa0731780:intron 15.0%
!! TTACTAAACTAACTTATATT+AGG - chr5_1:43284970-43284989 None:intergenic 15.0%
!!! TAATATAAGTTAGTTTAGTA+AGG + chr5_1:43284969-43284988 Msa0731780:intron 15.0%
!! ATTAAATTACAAAGCAAAAA+AGG - chr5_1:43285575-43285594 None:intergenic 15.0%
!! CTTAAATTAATATAAAGAAG+AGG - chr5_1:43286082-43286101 None:intergenic 15.0%
!! CTCTTCTTTATATTAATTTA+AGG + chr5_1:43286080-43286099 Msa0731780:intron 15.0%
!!! AAAACTGAATTTTTTTTTGA+AGG - chr5_1:43286311-43286330 None:intergenic 15.0%
!! AAAAATCGCAAAAAAAATTT+GGG - chr5_1:43286336-43286355 None:intergenic 15.0%
!! AAAAAATCGCAAAAAAAATT+TGG - chr5_1:43286337-43286356 None:intergenic 15.0%
!!! ATTAAAACTGAAAAATTTTC+GGG - chr5_1:43286361-43286380 None:intergenic 15.0%
!! AAACATATAAATGTTACAAA+TGG - chr5_1:43288513-43288532 None:intergenic 15.0%
!! ATACAAATTCATTGTATAAA+AGG - chr5_1:43288753-43288772 None:intergenic 15.0%
!!! TTTTTTTTTTTACGTAAACA+TGG - chr5_1:43289245-43289264 None:intergenic 15.0%
!!! AATATTAAATAGGTTGAAAT+TGG - chr5_1:43289498-43289517 None:intergenic 15.0%
!!! TAATTATTGTTTCTTATGAT+TGG + chr5_1:43289623-43289642 Msa0731780:intron 15.0%
!! TTATAATGATGATTATGGTA+AGG - chr5_1:43281807-43281826 None:intergenic 20.0%
!! ATGATAAATATTGAATATGC+AGG + chr5_1:43281848-43281867 Msa0731780:intron 20.0%
!! ATTTGAATTTATGTTGGAAT+TGG - chr5_1:43282452-43282471 None:intergenic 20.0%
!!! TCTCTTATTTGAATTTATGT+TGG - chr5_1:43282458-43282477 None:intergenic 20.0%
!!! TCTTTTTGGATTTTTATAAC+CGG - chr5_1:43282486-43282505 None:intergenic 20.0%
!! TCAATAACATTTAATTCCAA+AGG + chr5_1:43282542-43282561 Msa0731780:intron 20.0%
!!! AATGATAAAGTATATTTTGG+TGG + chr5_1:43283147-43283166 Msa0731780:intron 20.0%
!! ATAATAATGTGTGTATTTCT+TGG + chr5_1:43283791-43283810 Msa0731780:intron 20.0%
!! TAGTAATGTGACTTTAATAA+TGG - chr5_1:43283914-43283933 None:intergenic 20.0%
!! AATATTAAAAATAGAAAGGG+GGG + chr5_1:43284007-43284026 Msa0731780:intron 20.0%
!! AAATATCAAAAACTAGAGAA+AGG + chr5_1:43284066-43284085 Msa0731780:intron 20.0%
!!! ATTTTATACCTCTTTAATGT+AGG - chr5_1:43284721-43284740 None:intergenic 20.0%
!! ATAAAGTGCATTAAAAAGAA+TGG - chr5_1:43285168-43285187 None:intergenic 20.0%
!! TCATAATCAATTCAATCTTT+GGG + chr5_1:43285275-43285294 Msa0731780:intron 20.0%
!! ATTTCACATTGATCAATTTA+AGG + chr5_1:43285371-43285390 Msa0731780:intron 20.0%
!!! AATTTCTTATCAATAGCTTT+TGG - chr5_1:43285411-43285430 None:intergenic 20.0%
!! GTATGATCTTAAATGATTAT+GGG - chr5_1:43285670-43285689 None:intergenic 20.0%
!! TGTATGATCTTAAATGATTA+TGG - chr5_1:43285671-43285690 None:intergenic 20.0%
!!! GAAATTTGTGTATAATTTTG+TGG - chr5_1:43285713-43285732 None:intergenic 20.0%
!! AATTTGTAATTTATGAGTAC+AGG + chr5_1:43285764-43285783 Msa0731780:intron 20.0%
!! ATAGAATAGCCATAATAATA+TGG - chr5_1:43285870-43285889 None:intergenic 20.0%
!!! ATTTTGTTAATTTGATGATG+TGG - chr5_1:43286237-43286256 None:intergenic 20.0%
!! ACATCATCAAATTAACAAAA+TGG + chr5_1:43286236-43286255 Msa0731780:intron 20.0%
!! AACAAAAAAAAAATAAGCCA+GGG - chr5_1:43286283-43286302 None:intergenic 20.0%
!! AAACAAAAAAAAAATAAGCC+AGG - chr5_1:43286284-43286303 None:intergenic 20.0%
!!! TTAAAACTGAAAAATTTTCG+GGG - chr5_1:43286360-43286379 None:intergenic 20.0%
!! GTAAATAACATGTAATATCA+GGG - chr5_1:43287805-43287824 None:intergenic 20.0%
!! TGTAAATAACATGTAATATC+AGG - chr5_1:43287806-43287825 None:intergenic 20.0%
!!! ATTGTATCCTTAAAATGTTT+TGG - chr5_1:43288014-43288033 None:intergenic 20.0%
!!! TTATGAGATAATTTTTCACA+TGG + chr5_1:43288390-43288409 Msa0731780:intron 20.0%
!!! TATGAGATAATTTTTCACAT+GGG + chr5_1:43288391-43288410 Msa0731780:intron 20.0%
!!! AGCATTTTCAATTTTGTTAT+TGG + chr5_1:43288722-43288741 Msa0731780:intron 20.0%
!!! TTTATTTGTGAAGAAGATTT+TGG + chr5_1:43288867-43288886 Msa0731780:intron 20.0%
!! ATAGTAGTTAAGAAAAGAAA+AGG - chr5_1:43288962-43288981 None:intergenic 20.0%
!!! AACTACAAATTTTGATGTTT+TGG + chr5_1:43289092-43289111 Msa0731780:intron 20.0%
!!! ACTACAAATTTTGATGTTTT+GGG + chr5_1:43289093-43289112 Msa0731780:intron 20.0%
!!! TTGTTTATCTTTGAGTTTAA+AGG - chr5_1:43289212-43289231 None:intergenic 20.0%
!! TCAAATAAACCAATTTAAAC+AGG + chr5_1:43289465-43289484 Msa0731780:intron 20.0%
!! AAATATGTTAAACAAAGAAG+AGG - chr5_1:43289602-43289621 None:intergenic 20.0%
!!! ATTATACAAGTTGAAACTAA+GGG - chr5_1:43289770-43289789 None:intergenic 20.0%
!! TTATGAATATGATGATGATG+TGG - chr5_1:43281283-43281302 None:intergenic 25.0%
! GTTAATAATATTTGATGCCA+TGG + chr5_1:43281568-43281587 Msa0731780:exon 25.0%
!! ACATTTACTAAGGTTTTTGT+TGG + chr5_1:43281626-43281645 Msa0731780:CDS 25.0%
!!! AGGACATATTTTGAACAATT+TGG + chr5_1:43281683-43281702 Msa0731780:CDS 25.0%
! ATTATCACTGATAAGAATAC+AGG + chr5_1:43281725-43281744 Msa0731780:CDS 25.0%
! AAGAATACAGGAAAATCTAA+AGG + chr5_1:43281737-43281756 Msa0731780:CDS 25.0%
! CAATGAAATTAATTACCTCT+TGG - chr5_1:43281990-43282009 None:intergenic 25.0%
! TCAAATAGATCGATTATTGT+GGG - chr5_1:43282083-43282102 None:intergenic 25.0%
!! AATATCATAGTTTTCAGACT+CGG + chr5_1:43282211-43282230 Msa0731780:intron 25.0%
!! TTTTTGGATTTTTATAACCG+GGG - chr5_1:43282484-43282503 None:intergenic 25.0%
!! CTTTTTGGATTTTTATAACC+GGG - chr5_1:43282485-43282504 None:intergenic 25.0%
!! ATACTTTCTTGAGATCTTTT+TGG - chr5_1:43282500-43282519 None:intergenic 25.0%
!! ATTGATGATAATACTTGTGT+TGG - chr5_1:43282527-43282546 None:intergenic 25.0%
! AAAAAAAAAAGAGAGAGAAC+CGG + chr5_1:43282652-43282671 Msa0731780:intron 25.0%
!! TTAAACATAGTTTTCAGACT+CGG - chr5_1:43282833-43282852 None:intergenic 25.0%
! ATATCACCATAAAAATTAGG+TGG + chr5_1:43282852-43282871 Msa0731780:intron 25.0%
!!! ATTTCAATTTTTCTGGTCAT+TGG - chr5_1:43283031-43283050 None:intergenic 25.0%
!! GAGATGAATTTCAATTTTTC+TGG - chr5_1:43283038-43283057 None:intergenic 25.0%
! TGGTCATTTATTTATTACTG+TGG + chr5_1:43283343-43283362 Msa0731780:intron 25.0%
! AATTTACCCATGTTATGTTA+TGG + chr5_1:43283375-43283394 Msa0731780:intron 25.0%
! CAGTTATCTAATTAATACCA+TGG - chr5_1:43283431-43283450 None:intergenic 25.0%
! ATGATATGAAATGATATGTG+AGG - chr5_1:43283541-43283560 None:intergenic 25.0%
! CATGATGATTTAAAAGAGTA+AGG - chr5_1:43283603-43283622 None:intergenic 25.0%
!! TTTAGAGTAAGGTTACATAA+GGG - chr5_1:43283662-43283681 None:intergenic 25.0%
!!! TTTTAGAGTAAGGTTACATA+AGG - chr5_1:43283663-43283682 None:intergenic 25.0%
!!! AATTTTGTGGAATTTGAGTT+TGG + chr5_1:43283833-43283852 Msa0731780:intron 25.0%
! TCAATAAAAAATGTAGTCCA+CGG + chr5_1:43284174-43284193 Msa0731780:intron 25.0%
! TCAAATTAACCTACCTATAT+AGG - chr5_1:43284217-43284236 None:intergenic 25.0%
! TTGATCAAAGAGAAATTTCA+CGG + chr5_1:43284647-43284666 Msa0731780:intron 25.0%
! GTATTGTGTATTGCTTATAT+TGG - chr5_1:43285006-43285025 None:intergenic 25.0%
! ACATATATATGAAGTCTCAT+GGG - chr5_1:43285101-43285120 None:intergenic 25.0%
! GTCATAATCAATTCAATCTT+TGG + chr5_1:43285274-43285293 Msa0731780:intron 25.0%
!!! TAGTACAATTTCTTGTTTTG+TGG - chr5_1:43285327-43285346 None:intergenic 25.0%
! CAATACTATCAACAACTTTA+TGG + chr5_1:43285819-43285838 Msa0731780:CDS 25.0%
! TTAACTGATTAAACTTTGCA+GGG - chr5_1:43286587-43286606 None:intergenic 25.0%
! TTTAACTGATTAAACTTTGC+AGG - chr5_1:43286586-43286605 None:intergenic 25.0%
! ATCAAATTAACAAAATGGCA+TGG + chr5_1:43286241-43286260 Msa0731780:intron 25.0%
! TCAAATTAACAAAATGGCAT+GGG + chr5_1:43286242-43286261 Msa0731780:intron 25.0%
! ACAAAAAAAAAATAAGCCAG+GGG - chr5_1:43286282-43286301 None:intergenic 25.0%
! TTTAACTGATTAAACTTTGC+AGG + chr5_1:43286586-43286605 Msa0731780:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG + chr5_1:43286587-43286606 Msa0731780:intron 25.0%
!!! AGGGTGGATTAATTAAATTA+AGG - chr5_1:43286691-43286710 None:intergenic 25.0%
! AATTTGAAAAGATTAAAGGG+TGG - chr5_1:43286707-43286726 None:intergenic 25.0%
!! AGTGTCAATTCAACATTTTA+TGG - chr5_1:43286734-43286753 None:intergenic 25.0%
!!! GTTTTTTAGTTATAAGTCAG+TGG - chr5_1:43287122-43287141 None:intergenic 25.0%
! ACTTATAACTAAAAAACCGA+CGG + chr5_1:43287125-43287144 Msa0731780:intron 25.0%
!!! TTAACTACCGTAGAATTTTT+TGG + chr5_1:43287151-43287170 Msa0731780:intron 25.0%
! GAAATGACCAAAAAATTCTA+CGG - chr5_1:43287161-43287180 None:intergenic 25.0%
!!! TATGATTTTGCTATAACATG+TGG + chr5_1:43287418-43287437 Msa0731780:intron 25.0%
! TTAACCGTATTATGTATGTA+TGG + chr5_1:43287501-43287520 Msa0731780:intron 25.0%
! TAACCGTATTATGTATGTAT+GGG + chr5_1:43287502-43287521 Msa0731780:intron 25.0%
!! CACACGTTAATTCTAAAAAA+TGG - chr5_1:43287834-43287853 None:intergenic 25.0%
!! AATGTAGCCAAAACATTTTA+AGG + chr5_1:43288004-43288023 Msa0731780:intron 25.0%
! TTGTTTGGTATAAAAGAAAG+TGG - chr5_1:43288084-43288103 None:intergenic 25.0%
! AAAATGAGAAAATGCAAAGT+GGG - chr5_1:43288248-43288267 None:intergenic 25.0%
! TAAAATGAGAAAATGCAAAG+TGG - chr5_1:43288249-43288268 None:intergenic 25.0%
! ATGAAATGAATTTGTAGGTT+GGG - chr5_1:43288279-43288298 None:intergenic 25.0%
! AGTACATGAAATGAATTTGT+AGG - chr5_1:43288284-43288303 None:intergenic 25.0%
!!! ATTTTCTCTTTGACTTCATT+AGG + chr5_1:43288356-43288375 Msa0731780:intron 25.0%
!!! TTTTCTCTTTGACTTCATTA+GGG + chr5_1:43288357-43288376 Msa0731780:intron 25.0%
! TATGACATAAGTTCAATTTC+AGG - chr5_1:43288449-43288468 None:intergenic 25.0%
! AAAAAATGTTCTTAAGACAC+TGG - chr5_1:43288574-43288593 None:intergenic 25.0%
! CCTTGAATAATAAGTTTCTA+TGG - chr5_1:43288672-43288691 None:intergenic 25.0%
! CCATAGAAACTTATTATTCA+AGG + chr5_1:43288669-43288688 Msa0731780:intron 25.0%
!! TTTTACGAAAATGCAAATTC+TGG + chr5_1:43288895-43288914 Msa0731780:intron 25.0%
! TAACTACTATTATCATGTGA+AGG + chr5_1:43288972-43288991 Msa0731780:intron 25.0%
!!! CTACAAATTTTGATGTTTTG+GGG + chr5_1:43289094-43289113 Msa0731780:intron 25.0%
! ACAACTTATAGACATATCAT+CGG + chr5_1:43289392-43289411 Msa0731780:intron 25.0%
!! TTATACAAGTTGAAACTAAG+GGG - chr5_1:43289769-43289788 None:intergenic 25.0%
!! GATTATACAAGTTGAAACTA+AGG - chr5_1:43289771-43289790 None:intergenic 25.0%
! TTGATTAATCAGTCCAAATT+TGG - chr5_1:43289900-43289919 None:intergenic 25.0%
! AATATGATGATGATGTGGTA+TGG - chr5_1:43281278-43281297 None:intergenic 30.0%
!! TTTTAAGAGAAAAGAGAGAG+AGG - chr5_1:43281316-43281335 None:intergenic 30.0%
ATTTAGTGATTCTCTCCTAT+TGG + chr5_1:43281335-43281354 Msa0731780:five_prime_UTR 30.0%
TTTAGTGATTCTCTCCTATT+GGG + chr5_1:43281336-43281355 Msa0731780:five_prime_UTR 30.0%
! TCTTTTGCTTCTTCTTCTTT+TGG - chr5_1:43281431-43281450 None:intergenic 30.0%
! TTTACTAAGGTTTTTGTTGG+AGG + chr5_1:43281629-43281648 Msa0731780:CDS 30.0%
ACAGGAAAATCTAAAGGATA+CGG + chr5_1:43281743-43281762 Msa0731780:CDS 30.0%
AATTGTAACATTGCTTCTCT+TGG + chr5_1:43281945-43281964 Msa0731780:CDS 30.0%
TGAAATTAATTACCTCTTGG+TGG - chr5_1:43281987-43282006 None:intergenic 30.0%
GTCAAATAGATCGATTATTG+TGG - chr5_1:43282084-43282103 None:intergenic 30.0%
GTTATTTAACCGGATAAACT+CGG + chr5_1:43282373-43282392 Msa0731780:intron 30.0%
! TGATGACCACCTAATTTTTA+TGG - chr5_1:43282861-43282880 None:intergenic 30.0%
! AATTAGGTGGTCATCATTTT+AGG + chr5_1:43282865-43282884 Msa0731780:intron 30.0%
GAGTTACCATAACATAACAT+GGG - chr5_1:43283384-43283403 None:intergenic 30.0%
TGAGTTACCATAACATAACA+TGG - chr5_1:43283385-43283404 None:intergenic 30.0%
TTAGAGTAAGGTTACATAAG+GGG - chr5_1:43283661-43283680 None:intergenic 30.0%
GCAACTTCTTATAGTACATA+TGG - chr5_1:43283734-43283753 None:intergenic 30.0%
!!! ATGGTGATGTGTTTGTTTTA+GGG + chr5_1:43283763-43283782 Msa0731780:intron 30.0%
!! GATTCATAAGCTTGTTTTCA+GGG - chr5_1:43283869-43283888 None:intergenic 30.0%
!! TGATTCATAAGCTTGTTTTC+AGG - chr5_1:43283870-43283889 None:intergenic 30.0%
AGTCACATTACTATCTAATG+TGG + chr5_1:43283921-43283940 Msa0731780:intron 30.0%
GTCACATTACTATCTAATGT+GGG + chr5_1:43283922-43283941 Msa0731780:intron 30.0%
AAAAACTAGAGAAAGGTCTA+AGG + chr5_1:43284073-43284092 Msa0731780:intron 30.0%
AATAGTAGATATGTAGTCCA+TGG + chr5_1:43284146-43284165 Msa0731780:intron 30.0%
!!! ATTTTTTATTGACCATGCCA+TGG - chr5_1:43284166-43284185 None:intergenic 30.0%
!! ATACAAAAGTACCAAGAGAT+GGG - chr5_1:43284270-43284289 None:intergenic 30.0%
ATAGACAACAATAACATTGC+TGG - chr5_1:43284320-43284339 None:intergenic 30.0%
TGAGAACTGTATAAATTGCA+TGG + chr5_1:43284339-43284358 Msa0731780:intron 30.0%
TAGGTTAGACTTTCATAATG+TGG + chr5_1:43284476-43284495 Msa0731780:intron 30.0%
TTTCATAATGTGGTGAATCT+AGG + chr5_1:43284486-43284505 Msa0731780:intron 30.0%
TATCTAACATTGTGACGAAT+AGG + chr5_1:43284543-43284562 Msa0731780:intron 30.0%
!!! AACATTTTCTGGTTTTTCAG+AGG - chr5_1:43284585-43284604 None:intergenic 30.0%
! AAGACAGTGAAAACATTTTC+TGG - chr5_1:43284596-43284615 None:intergenic 30.0%
ATACAAGTCCTACATTAAAG+AGG + chr5_1:43284710-43284729 Msa0731780:intron 30.0%
GACTTAACGTGTAAATGATT+TGG - chr5_1:43284845-43284864 None:intergenic 30.0%
! TTTTTCTAATAGACCTCTCA+GGG - chr5_1:43284880-43284899 None:intergenic 30.0%
!!! TTTTTTCTAATAGACCTCTC+AGG - chr5_1:43284881-43284900 None:intergenic 30.0%
AACTTCATCTCTTTCTGATT+TGG - chr5_1:43284912-43284931 None:intergenic 30.0%
CACATATATATGAAGTCTCA+TGG - chr5_1:43285102-43285121 None:intergenic 30.0%
GAGATGACATTATAATGGTA+TGG - chr5_1:43285143-43285162 None:intergenic 30.0%
TAAACCCATCAAGCATAAAA+TGG - chr5_1:43285196-43285215 None:intergenic 30.0%
ATGCCTTAGTTACATGAAAA+AGG + chr5_1:43285233-43285252 Msa0731780:intron 30.0%
!!! CAATTTCTTGTTTTGTGGTA+TGG - chr5_1:43285322-43285341 None:intergenic 30.0%
! ATGCTTCTAATTTTTCTCAC+CGG + chr5_1:43285432-43285451 Msa0731780:intron 30.0%
!! TATGGTGAAGTTAATTTGTG+AGG - chr5_1:43285463-43285482 None:intergenic 30.0%
AGAGAAGCAACAACTTAAAA+TGG - chr5_1:43285513-43285532 None:intergenic 30.0%
GTTGAATGCAGTAATGTATT+TGG - chr5_1:43285542-43285561 None:intergenic 30.0%
GATCTTAAATGATTATGGGA+GGG - chr5_1:43285666-43285685 None:intergenic 30.0%
TGATCTTAAATGATTATGGG+AGG - chr5_1:43285667-43285686 None:intergenic 30.0%
ATGGGTTCACCATATTATTA+TGG + chr5_1:43285858-43285877 Msa0731780:CDS 30.0%
CTTATTAATGGTTGTTGAAG+TGG - chr5_1:43286017-43286036 None:intergenic 30.0%
CACTTCAACAACCATTAATA+AGG + chr5_1:43286015-43286034 Msa0731780:CDS 30.0%
TAACTGATTAAACTTTGCAG+GGG - chr5_1:43286588-43286607 None:intergenic 30.0%
AGGAAAAAAAAAATTAGCCC+AGG + chr5_1:43286486-43286505 Msa0731780:intron 30.0%
GGAAAAAAAAAATTAGCCCA+GGG + chr5_1:43286487-43286506 Msa0731780:intron 30.0%
GAAAAAAAAAATTAGCCCAG+GGG + chr5_1:43286488-43286507 Msa0731780:intron 30.0%
CAAAATTACCATAATGGCAT+GGG - chr5_1:43286528-43286547 None:intergenic 30.0%
TCAAAATTACCATAATGGCA+TGG - chr5_1:43286529-43286548 None:intergenic 30.0%
CGTCATCAAAATTACCATAA+TGG - chr5_1:43286534-43286553 None:intergenic 30.0%
!!! TTATGGTAATTTTGATGACG+TGG + chr5_1:43286534-43286553 Msa0731780:intron 30.0%
TAACTGATTAAACTTTGCAG+GGG + chr5_1:43286588-43286607 Msa0731780:intron 30.0%
TTGACACTAATATTCAACCT+TGG + chr5_1:43286746-43286765 Msa0731780:intron 30.0%
GTCAAATGTTAGATATACCA+AGG - chr5_1:43286766-43286785 None:intergenic 30.0%
CTTGTCTCATGTTTGAATTA+TGG + chr5_1:43286838-43286857 Msa0731780:intron 30.0%
AAGATGTTCATGATAACACA+TGG - chr5_1:43287183-43287202 None:intergenic 30.0%
TAGTGTATAACGTACAATGT+AGG + chr5_1:43287278-43287297 Msa0731780:intron 30.0%
ATGAATAGAGAGAATTAGAG+TGG + chr5_1:43287320-43287339 Msa0731780:intron 30.0%
TGAATAGAGAGAATTAGAGT+GGG + chr5_1:43287321-43287340 Msa0731780:intron 30.0%
TGACCCATACATACATAATA+CGG - chr5_1:43287508-43287527 None:intergenic 30.0%
AAAGTAATAGTGAATGCATG+TGG + chr5_1:43287580-43287599 Msa0731780:intron 30.0%
!!! TGGTCATTTTTCCATAAAGT+TGG - chr5_1:43287776-43287795 None:intergenic 30.0%
! ATGTAATATCAGGGCTATTT+TGG - chr5_1:43287796-43287815 None:intergenic 30.0%
AAAGTGGAATAGAAAGTGAA+AGG - chr5_1:43288068-43288087 None:intergenic 30.0%
GAAAAAGAATAGAAAGTGAG+AGG - chr5_1:43288117-43288136 None:intergenic 30.0%
!!! CATTTTGACTGGATCTTTAA+GGG - chr5_1:43288203-43288222 None:intergenic 30.0%
CATGAAATGAATTTGTAGGT+TGG - chr5_1:43288280-43288299 None:intergenic 30.0%
! ACAAATGGTGTTAAGAGATT+CGG - chr5_1:43288498-43288517 None:intergenic 30.0%
AATGCTAATAAGTTGTCCTA+GGG - chr5_1:43288708-43288727 None:intergenic 30.0%
AAATGCTAATAAGTTGTCCT+AGG - chr5_1:43288709-43288728 None:intergenic 30.0%
AGAACTAGATTAACCTCTAA+TGG + chr5_1:43288788-43288807 Msa0731780:intron 30.0%
TAATAGAGTGTGAGATGATA+TGG - chr5_1:43289066-43289085 None:intergenic 30.0%
TGCAATTTGGATGTCTTAAT+TGG - chr5_1:43289131-43289150 None:intergenic 30.0%
ATTTATATAAGCTCTCGATC+AGG + chr5_1:43289417-43289436 Msa0731780:intron 30.0%
! ATCTGGAGTAGTTATAACTT+CGG + chr5_1:43289692-43289711 Msa0731780:CDS 30.0%
! TATACAAGTTGAAACTAAGG+GGG - chr5_1:43289768-43289787 None:intergenic 30.0%
!!! AAGCTAATGGTTTTGTAGGA+AGG - chr5_1:43281063-43281082 None:intergenic 35.0%
! CTCTTTCTTCTTTTCCCAAT+AGG - chr5_1:43281353-43281372 None:intergenic 35.0%
CTATTGGGAAAAGAAGAAAG+AGG + chr5_1:43281351-43281370 Msa0731780:five_prime_UTR 35.0%
!! AAGAAAGAGGTGTTGTTGAA+TGG + chr5_1:43281364-43281383 Msa0731780:five_prime_UTR 35.0%
TGGGGTTGAACAACAAAAAA+GGG + chr5_1:43281387-43281406 Msa0731780:five_prime_UTR 35.0%
ATCAAGTGTACTACTACTCT+TGG - chr5_1:43281497-43281516 None:intergenic 35.0%
CCAAATTGTGATCGATAATG+TGG - chr5_1:43281599-43281618 None:intergenic 35.0%
CCACATTATCGATCACAATT+TGG + chr5_1:43281596-43281615 Msa0731780:CDS 35.0%
TGGAGACACAACATTTACTA+AGG + chr5_1:43281616-43281635 Msa0731780:CDS 35.0%
AAACTCCAACTGATGAAATG+AGG + chr5_1:43281663-43281682 Msa0731780:CDS 35.0%
TATGTCCTCATTTCATCAGT+TGG - chr5_1:43281671-43281690 None:intergenic 35.0%
CTCTTCTTCCATCAATTACT+GGG - chr5_1:43281923-43281942 None:intergenic 35.0%
ATAGATCGATTATTGTGGGA+CGG - chr5_1:43282079-43282098 None:intergenic 35.0%
ATTCAAATAAGAGATTGCCC+CGG + chr5_1:43282464-43282483 Msa0731780:intron 35.0%
GATTGTAATGTAATGCTGCA+GGG + chr5_1:43283169-43283188 Msa0731780:intron 35.0%
ACATAGCTAACTTACCCATA+TGG - chr5_1:43283324-43283343 None:intergenic 35.0%
ATATGGGTAAGTTAGCTATG+TGG + chr5_1:43283323-43283342 Msa0731780:intron 35.0%
GTAACTCATAGTCAGTCAAA+GGG + chr5_1:43283397-43283416 Msa0731780:intron 35.0%
TAACTCATAGTCAGTCAAAG+GGG + chr5_1:43283398-43283417 Msa0731780:intron 35.0%
ACAATGAGACCTACTGTAAT+TGG - chr5_1:43283506-43283525 None:intergenic 35.0%
TAGAGTAAGGTTACATAAGG+GGG - chr5_1:43283660-43283679 None:intergenic 35.0%
TGGATATGATCATCTATGCA+TGG - chr5_1:43283714-43283733 None:intergenic 35.0%
! AAGAAGTTGCATTTTCTGCA+TGG + chr5_1:43283744-43283763 Msa0731780:intron 35.0%
!! CATGGTGATGTGTTTGTTTT+AGG + chr5_1:43283762-43283781 Msa0731780:intron 35.0%
!! TACAAAAGTACCAAGAGATG+GGG - chr5_1:43284269-43284288 None:intergenic 35.0%
!! CATACAAAAGTACCAAGAGA+TGG - chr5_1:43284271-43284290 None:intergenic 35.0%
AGAGTTGAGTCAAACAGATT+AGG + chr5_1:43284457-43284476 Msa0731780:intron 35.0%
AACATTGTGACGAATAGGAT+TGG + chr5_1:43284548-43284567 Msa0731780:intron 35.0%
AAATTTCACGGTTCTTCTCA+AGG + chr5_1:43284659-43284678 Msa0731780:intron 35.0%
AATTTCACGGTTCTTCTCAA+GGG + chr5_1:43284660-43284679 Msa0731780:intron 35.0%
CCTTGGAATGGCATAATATT+GGG + chr5_1:43284683-43284702 Msa0731780:intron 35.0%
CTTGGAATGGCATAATATTG+GGG + chr5_1:43284684-43284703 Msa0731780:intron 35.0%
TTGGAATGGCATAATATTGG+GGG + chr5_1:43284685-43284704 Msa0731780:intron 35.0%
TGGTCGAGATGACATTATAA+TGG - chr5_1:43285148-43285167 None:intergenic 35.0%
! TCCTTCCATTTTATGCTTGA+TGG + chr5_1:43285188-43285207 Msa0731780:intron 35.0%
! CCTTCCATTTTATGCTTGAT+GGG + chr5_1:43285189-43285208 Msa0731780:intron 35.0%
!! CCTCCTTTTTCATGTAACTA+AGG - chr5_1:43285239-43285258 None:intergenic 35.0%
CCTTAGTTACATGAAAAAGG+AGG + chr5_1:43285236-43285255 Msa0731780:intron 35.0%
ATTATGACTCACTTCAGTGA+TGG - chr5_1:43285262-43285281 None:intergenic 35.0%
!! GTTAATTTGTGAGGTGTTTC+CGG - chr5_1:43285454-43285473 None:intergenic 35.0%
!! ATTGTTGTGGACTAGTAGTA+TGG - chr5_1:43285481-43285500 None:intergenic 35.0%
ATGGTAGAGTTCTATTGTTG+TGG - chr5_1:43285494-43285513 None:intergenic 35.0%
TAGCTGCAAACAAAGTTGAA+AGG - chr5_1:43285599-43285618 None:intergenic 35.0%
! AATCTGTGGGTTATACATTG+TGG - chr5_1:43285790-43285809 None:intergenic 35.0%
TGTAGTAGGGTAGTATAGAT+AGG - chr5_1:43285958-43285977 None:intergenic 35.0%
AAAGATTACCACTAGGAGAA+GGG - chr5_1:43286055-43286074 None:intergenic 35.0%
AGGATAGAAAGATTACCACT+AGG - chr5_1:43286062-43286081 None:intergenic 35.0%
! AAAAAGGATTAGCGATTGCA+GGG - chr5_1:43286616-43286635 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG - chr5_1:43286615-43286634 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG + chr5_1:43286615-43286634 Msa0731780:intron 35.0%
! AAAAAGGATTAGCGATTGCA+GGG + chr5_1:43286616-43286635 Msa0731780:intron 35.0%
AAGTAAGCGTCATTTGTGAT+TGG + chr5_1:43287213-43287232 Msa0731780:intron 35.0%
GAATAGAGAGAATTAGAGTG+GGG + chr5_1:43287322-43287341 Msa0731780:intron 35.0%
GTTTCTGTATGGAAACAGAA+GGG + chr5_1:43287602-43287621 Msa0731780:intron 35.0%
! TACAGTACTTTTCCACTGTT+TGG + chr5_1:43287656-43287675 Msa0731780:intron 35.0%
!!! TGTGGAAAGTTTTTGAGTGT+GGG - chr5_1:43287724-43287743 None:intergenic 35.0%
AGGGAAATGAACCAACTTTA+TGG + chr5_1:43287762-43287781 Msa0731780:intron 35.0%
!!! AGAGGATTGTTTTGGTTGTT+TGG - chr5_1:43288099-43288118 None:intergenic 35.0%
! AGAAAGTGAGAGGATTGTTT+TGG - chr5_1:43288107-43288126 None:intergenic 35.0%
GAGTGAGGAAAGATTATATG+AGG - chr5_1:43288143-43288162 None:intergenic 35.0%
!!! CCATTTTGACTGGATCTTTA+AGG - chr5_1:43288204-43288223 None:intergenic 35.0%
CCTTAAAGATCCAGTCAAAA+TGG + chr5_1:43288201-43288220 Msa0731780:intron 35.0%
!! AAAGCAAAGACCATTTTGAC+TGG - chr5_1:43288214-43288233 None:intergenic 35.0%
GAATTTGTATTCACAGAAGG+AGG - chr5_1:43288819-43288838 None:intergenic 35.0%
GCAGAATTTGTATTCACAGA+AGG - chr5_1:43288822-43288841 None:intergenic 35.0%
AGGTGAGTCAAAAAGGAAAT+AGG + chr5_1:43288992-43289011 Msa0731780:intron 35.0%
AGATCATATCGACAAGTTCA+TGG - chr5_1:43289154-43289173 None:intergenic 35.0%
GGACTTTCACCTGTTTAAAT+TGG - chr5_1:43289477-43289496 None:intergenic 35.0%
TCGGAAAGTTCAAATACTCA+AGG + chr5_1:43289711-43289730 Msa0731780:CDS 35.0%
CGGAAAGTTCAAATACTCAA+GGG + chr5_1:43289712-43289731 Msa0731780:CDS 35.0%
! ATACAAGTTGAAACTAAGGG+GGG - chr5_1:43289767-43289786 None:intergenic 35.0%
! ATGACTTGTGTTCATCACTA+TGG + chr5_1:43289870-43289889 Msa0731780:three_prime_UTR 35.0%
TCACTATGGCAATCCAAATT+TGG + chr5_1:43289884-43289903 Msa0731780:three_prime_UTR 35.0%
GGACTGATTAATCAACTTCA+TGG + chr5_1:43289905-43289924 Msa0731780:three_prime_UTR 35.0%
AGTGAAAATGCTTGAAGACA+AGG - chr5_1:43289955-43289974 None:intergenic 35.0%
!!! GGAGAAGCTAATGGTTTTGT+AGG - chr5_1:43281067-43281086 None:intergenic 40.0%
GCAAACACTAATATGCTTGC+TGG - chr5_1:43281105-43281124 None:intergenic 40.0%
ATAGAGAGAGAAGAGAGTAG+TGG - chr5_1:43281171-43281190 None:intergenic 40.0%
GATGATGTGGTATGGTTGTT+TGG - chr5_1:43281270-43281289 None:intergenic 40.0%
AAGAGAAAAGAGAGAGAGGT+GGG - chr5_1:43281312-43281331 None:intergenic 40.0%
TAAGAGAAAAGAGAGAGAGG+TGG - chr5_1:43281313-43281332 None:intergenic 40.0%
!! AAAGAGGTGTTGTTGAATGG+TGG + chr5_1:43281367-43281386 Msa0731780:five_prime_UTR 40.0%
!! AAGAGGTGTTGTTGAATGGT+GGG + chr5_1:43281368-43281387 Msa0731780:five_prime_UTR 40.0%
GTGGGGTTGAACAACAAAAA+AGG + chr5_1:43281386-43281405 Msa0731780:five_prime_UTR 40.0%
TCGATAATGTGGATAAGCCA+TGG - chr5_1:43281588-43281607 None:intergenic 40.0%
!!! TTTTTGTTGGAGGACTAGCT+TGG + chr5_1:43281639-43281658 Msa0731780:CDS 40.0%
!!! TTTTGTTGGAGGACTAGCTT+GGG + chr5_1:43281640-43281659 Msa0731780:CDS 40.0%
TGATCCAGAATCAGCTAGAA+GGG + chr5_1:43281881-43281900 Msa0731780:CDS 40.0%
GATCCAAACCCAGTAATTGA+TGG + chr5_1:43281912-43281931 Msa0731780:CDS 40.0%
CTTCCATCAATTACTGGGTT+TGG - chr5_1:43281918-43281937 None:intergenic 40.0%
GCTCTTCTTCCATCAATTAC+TGG - chr5_1:43281924-43281943 None:intergenic 40.0%
!! TAATTACCTCTTGGTGGTGA+TGG - chr5_1:43281981-43282000 None:intergenic 40.0%
TAGATCGATTATTGTGGGAC+GGG - chr5_1:43282078-43282097 None:intergenic 40.0%
!! GATGACTCGGTTAGATAACT+CGG + chr5_1:43282330-43282349 Msa0731780:intron 40.0%
CGAGTTAATCCGAGTTTATC+CGG - chr5_1:43282385-43282404 None:intergenic 40.0%
CGGATAAACTCGGATTAACT+CGG + chr5_1:43282383-43282402 Msa0731780:intron 40.0%
CGGATTAACTCGGATTGAAT+CGG + chr5_1:43282393-43282412 Msa0731780:intron 40.0%
TCGATCAATCTTGACTCCTT+TGG - chr5_1:43282561-43282580 None:intergenic 40.0%
GGATTGTAATGTAATGCTGC+AGG + chr5_1:43283168-43283187 Msa0731780:intron 40.0%
CAGTGATGTACCAACCATAT+GGG + chr5_1:43283307-43283326 Msa0731780:CDS 40.0%
AGCTAACTTACCCATATGGT+TGG - chr5_1:43283320-43283339 None:intergenic 40.0%
GGTAACTCATAGTCAGTCAA+AGG + chr5_1:43283396-43283415 Msa0731780:intron 40.0%
TGAGACCTACTGTAATTGGA+GGG - chr5_1:43283502-43283521 None:intergenic 40.0%
ATGAGACCTACTGTAATTGG+AGG - chr5_1:43283503-43283522 None:intergenic 40.0%
GAGTAAGGCAGAACAAAGTT+TGG - chr5_1:43283588-43283607 None:intergenic 40.0%
AGAGTAAGGTTACATAAGGG+GGG - chr5_1:43283659-43283678 None:intergenic 40.0%
TAGAAAGGGGGGATATAATG+TGG + chr5_1:43284018-43284037 Msa0731780:intron 40.0%
TAGATATGTAGTCCATGGCA+TGG + chr5_1:43284151-43284170 Msa0731780:intron 40.0%
CACATGTAGTGGTCCTATAT+AGG + chr5_1:43284201-43284220 Msa0731780:intron 40.0%
TGTAGTGGTCCTATATAGGT+AGG + chr5_1:43284205-43284224 Msa0731780:intron 40.0%
TGATAAAATCCCCCATCTCT+TGG + chr5_1:43284256-43284275 Msa0731780:intron 40.0%
!! ACAAAAGTACCAAGAGATGG+GGG - chr5_1:43284268-43284287 None:intergenic 40.0%
CTGGTGAGAAAATGACATGA+TGG - chr5_1:43284301-43284320 None:intergenic 40.0%
CTGTTTGACTCAACTCTAGT+AGG - chr5_1:43284454-43284473 None:intergenic 40.0%
GCCTTGGAATGGCATAATAT+TGG + chr5_1:43284682-43284701 Msa0731780:intron 40.0%
CCCAATATTATGCCATTCCA+AGG - chr5_1:43284686-43284705 None:intergenic 40.0%
CCCATCAAGCATAAAATGGA+AGG - chr5_1:43285192-43285211 None:intergenic 40.0%
!! ATAGCTTTTGGTTGTCGTGT+GGG - chr5_1:43285399-43285418 None:intergenic 40.0%
!! AATAGCTTTTGGTTGTCGTG+TGG - chr5_1:43285400-43285419 None:intergenic 40.0%
! ATTGTGCTTGCTGAATCTGT+GGG - chr5_1:43285803-43285822 None:intergenic 40.0%
! TATTGTGCTTGCTGAATCTG+TGG - chr5_1:43285804-43285823 None:intergenic 40.0%
TGGACCATCATCTTCAACAA+TGG + chr5_1:43285839-43285858 Msa0731780:CDS 40.0%
GGACCATCATCTTCAACAAT+GGG + chr5_1:43285840-43285859 Msa0731780:CDS 40.0%
GAACCCATTGTTGAAGATGA+TGG - chr5_1:43285846-43285865 None:intergenic 40.0%
GTAGGGTAGTATAGATAGGA+TGG - chr5_1:43285954-43285973 None:intergenic 40.0%
ATACTACCCTACTACACCAA+TGG + chr5_1:43285962-43285981 Msa0731780:CDS 40.0%
! GGAGAAGGTTGCCTTATTAA+TGG - chr5_1:43286029-43286048 None:intergenic 40.0%
AAGATTACCACTAGGAGAAG+GGG - chr5_1:43286054-43286073 None:intergenic 40.0%
GAAAGATTACCACTAGGAGA+AGG - chr5_1:43286056-43286075 None:intergenic 40.0%
TGTTATTCGTCCCTGCAAAT+AGG + chr5_1:43286111-43286130 Msa0731780:intron 40.0%
GTTATTCGTCCCTGCAAATA+GGG + chr5_1:43286112-43286131 Msa0731780:intron 40.0%
TTATTCGTCCCTGCAAATAG+GGG + chr5_1:43286113-43286132 Msa0731780:intron 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG - chr5_1:43286600-43286619 None:intergenic 40.0%
! GCAGTCATTAACTTGGTCAA+GGG - chr5_1:43286556-43286575 None:intergenic 40.0%
TGATGTGGCAGTCATTAACT+TGG - chr5_1:43286222-43286241 None:intergenic 40.0%
GAATTGACGAAAATACCCCT+GGG - chr5_1:43286264-43286283 None:intergenic 40.0%
! GCAGTCATTAACTTGGTCAA+GGG + chr5_1:43286556-43286575 Msa0731780:intron 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG + chr5_1:43286600-43286619 Msa0731780:intron 40.0%
TTATTCGTCCCTGCAAATAG+GGG - chr5_1:43286113-43286132 None:intergenic 40.0%
GTTATTCGTCCCTGCAAATA+GGG - chr5_1:43286112-43286131 None:intergenic 40.0%
TGTTATTCGTCCCTGCAAAT+AGG - chr5_1:43286111-43286130 None:intergenic 40.0%
AGAGTGGGGTAAAAAGAAAG+AGG + chr5_1:43287336-43287355 Msa0731780:intron 40.0%
GAGTGGGGTAAAAAGAAAGA+GGG + chr5_1:43287337-43287356 Msa0731780:intron 40.0%
AGTGGGGTAAAAAGAAAGAG+GGG + chr5_1:43287338-43287357 Msa0731780:intron 40.0%
TTGCTATAACATGTGGACAC+AGG + chr5_1:43287425-43287444 Msa0731780:intron 40.0%
TGCTATAACATGTGGACACA+GGG + chr5_1:43287426-43287445 Msa0731780:intron 40.0%
GAATGCATGTGGTTTCTGTA+TGG + chr5_1:43287591-43287610 Msa0731780:intron 40.0%
GGTTTCTGTATGGAAACAGA+AGG + chr5_1:43287601-43287620 Msa0731780:intron 40.0%
TGGAAACAGAAGGGAAAGAA+AGG + chr5_1:43287611-43287630 Msa0731780:intron 40.0%
GGAAACAGAAGGGAAAGAAA+GGG + chr5_1:43287612-43287631 Msa0731780:intron 40.0%
TGTTTGGCAGGACAAAGAAA+GGG + chr5_1:43287672-43287691 Msa0731780:intron 40.0%
! GGTAGGGAAAGAAAGTTTTG+AGG + chr5_1:43287693-43287712 Msa0731780:intron 40.0%
!!! AGGGAAAGAAAGTTTTGAGG+TGG + chr5_1:43287696-43287715 Msa0731780:intron 40.0%
!!! GGGAAAGAAAGTTTTGAGGT+GGG + chr5_1:43287697-43287716 Msa0731780:intron 40.0%
!!! CTGTGGAAAGTTTTTGAGTG+TGG - chr5_1:43287725-43287744 None:intergenic 40.0%
AAAAACTTTCCACAGCTGCA+AGG + chr5_1:43287730-43287749 Msa0731780:intron 40.0%
GTGAAAGGAAAGAAAGAGTG+AGG - chr5_1:43288158-43288177 None:intergenic 40.0%
GGATGCTCAAAGAAAGTGAA+AGG - chr5_1:43288173-43288192 None:intergenic 40.0%
! TGGATCTTTAAGGGTCTGTT+TGG - chr5_1:43288194-43288213 None:intergenic 40.0%
!! GGTCTTTGCTTTTCATGCAT+TGG + chr5_1:43288222-43288241 Msa0731780:intron 40.0%
CATGTGAAGGTGAGTCAAAA+AGG + chr5_1:43288985-43289004 Msa0731780:intron 40.0%
GACAAGTTCATGGTGCAATT+TGG - chr5_1:43289144-43289163 None:intergenic 40.0%
! TACAAGTTGAAACTAAGGGG+GGG - chr5_1:43289766-43289785 None:intergenic 40.0%
AGTGATGAACACAAGTCATG+TGG - chr5_1:43289869-43289888 None:intergenic 40.0%
AGAGAAGGAGGAGAAGCTAA+TGG - chr5_1:43281076-43281095 None:intergenic 45.0%
AAAAGAGAGAGAGGTGGGTA+TGG - chr5_1:43281307-43281326 None:intergenic 45.0%
!! AGAGGTGTTGTTGAATGGTG+GGG + chr5_1:43281369-43281388 Msa0731780:five_prime_UTR 45.0%
GTGATCCAGAATCAGCTAGA+AGG + chr5_1:43281880-43281899 Msa0731780:CDS 45.0%
! CATAGTTTTCAGACTCGGCT+CGG + chr5_1:43282216-43282235 Msa0731780:intron 45.0%
CGGTCAAAACCGGTAAAAAC+CGG - chr5_1:43282703-43282722 None:intergenic 45.0%
CGGTCAAAATCGGTCAAAAC+CGG - chr5_1:43282713-43282732 None:intergenic 45.0%
!! CGGTTTTGACCGATTTTGAC+CGG + chr5_1:43282711-43282730 Msa0731780:intron 45.0%
CGGTCAAAACCGGTCAAAAT+CGG - chr5_1:43282723-43282742 None:intergenic 45.0%
TGCATGACCGATCCAAATGT+TGG + chr5_1:43282750-43282769 Msa0731780:intron 45.0%
GTTCGAGCCAACATTTGGAT+CGG - chr5_1:43282760-43282779 None:intergenic 45.0%
!! ATCCAAATGTTGGCTCGAAC+CGG + chr5_1:43282760-43282779 Msa0731780:intron 45.0%
! CATAGTTTTCAGACTCGGCT+CGG - chr5_1:43282216-43282235 None:intergenic 45.0%
TGTAATGTAATGCTGCAGGG+AGG + chr5_1:43283172-43283191 Msa0731780:intron 45.0%
GTAATGTAATGCTGCAGGGA+GGG + chr5_1:43283173-43283192 Msa0731780:intron 45.0%
TAATGTAATGCTGCAGGGAG+GGG + chr5_1:43283174-43283193 Msa0731780:intron 45.0%
! CCATATGGTTGGTACATCAC+TGG - chr5_1:43283309-43283328 None:intergenic 45.0%
CCAGTGATGTACCAACCATA+TGG + chr5_1:43283306-43283325 Msa0731780:CDS 45.0%
! ATAGTCAGTCAAAGGGGTAC+TGG + chr5_1:43283404-43283423 Msa0731780:intron 45.0%
AGACCTACTGTAATTGGAGG+GGG - chr5_1:43283500-43283519 None:intergenic 45.0%
GAGACCTACTGTAATTGGAG+GGG - chr5_1:43283501-43283520 None:intergenic 45.0%
!!! GCTTGTTTTCAGGGTTAGCT+AGG - chr5_1:43283860-43283879 None:intergenic 45.0%
AAAGGGGGGATATAATGTGG+TGG + chr5_1:43284021-43284040 Msa0731780:intron 45.0%
AAGGGGGGATATAATGTGGT+GGG + chr5_1:43284022-43284041 Msa0731780:intron 45.0%
!! GTTTTTCAGAGGTTCCTCCA+CGG - chr5_1:43284574-43284593 None:intergenic 45.0%
CCTCTCAGGGTTAACACTAT+TGG - chr5_1:43284867-43284886 None:intergenic 45.0%
CCAATAGTGTTAACCCTGAG+AGG + chr5_1:43284864-43284883 Msa0731780:intron 45.0%
TGGGAACTCACAGAGTGTAT+CGG - chr5_1:43285082-43285101 None:intergenic 45.0%
!! TAGCTTTTGGTTGTCGTGTG+GGG - chr5_1:43285398-43285417 None:intergenic 45.0%
GTTGAAAATGTACCCCTTGG+TGG - chr5_1:43285903-43285922 None:intergenic 45.0%
! GGTGTTGAAAATGTACCCCT+TGG - chr5_1:43285906-43285925 None:intergenic 45.0%
AGCTTGTATGCGATGTGGTT+GGG - chr5_1:43285928-43285947 None:intergenic 45.0%
TACCCTACTACACCAATGGA+AGG + chr5_1:43285966-43285985 Msa0731780:CDS 45.0%
CTCCTTCCATTGGTGTAGTA+GGG - chr5_1:43285971-43285990 None:intergenic 45.0%
GAGAAAGTTGCTCCTTCCAT+TGG - chr5_1:43285981-43286000 None:intergenic 45.0%
TTAAGCGACCCCTATTTGCA+GGG - chr5_1:43286647-43286666 None:intergenic 45.0%
TTTAAGCGACCCCTATTTGC+AGG - chr5_1:43286646-43286665 None:intergenic 45.0%
! GGCAGTCATTAACTTGGTCA+AGG - chr5_1:43286555-43286574 None:intergenic 45.0%
GGAATTGACGAAAATACCCC+TGG + chr5_1:43286263-43286282 Msa0731780:intron 45.0%
GGAATTGACGAAAATACCCC+TGG - chr5_1:43286263-43286282 None:intergenic 45.0%
CGTCAATTCCCATGCCATTA+TGG + chr5_1:43286517-43286536 Msa0731780:intron 45.0%
TGACGTGGCAGTCATTAACT+TGG + chr5_1:43286549-43286568 Msa0731780:intron 45.0%
! GGCAGTCATTAACTTGGTCA+AGG + chr5_1:43286555-43286574 Msa0731780:intron 45.0%
TTTAAGCGACCCCTATTTGC+AGG + chr5_1:43286646-43286665 Msa0731780:intron 45.0%
TTAAGCGACCCCTATTTGCA+GGG + chr5_1:43286647-43286666 Msa0731780:intron 45.0%
CTACGGTAGTTAACTACCGT+CGG - chr5_1:43287144-43287163 None:intergenic 45.0%
GCTATAACATGTGGACACAG+GGG + chr5_1:43287427-43287446 Msa0731780:intron 45.0%
AGCTCATTCACATGGGTCTT+GGG - chr5_1:43287466-43287485 None:intergenic 45.0%
CCAAGACAGCTCATTCACAT+GGG - chr5_1:43287473-43287492 None:intergenic 45.0%
ACCAAGACAGCTCATTCACA+TGG - chr5_1:43287474-43287493 None:intergenic 45.0%
CAGAAGGGAAAGAAAGGGTA+TGG + chr5_1:43287617-43287636 Msa0731780:intron 45.0%
GGGTATGGAAAGAAAGTGAG+TGG + chr5_1:43287632-43287651 Msa0731780:intron 45.0%
! GTACTTTTCCACTGTTTGGC+AGG + chr5_1:43287660-43287679 Msa0731780:intron 45.0%
TTCTTTGTCCTGCCAAACAG+TGG - chr5_1:43287671-43287690 None:intergenic 45.0%
CTGTTTGGCAGGACAAAGAA+AGG + chr5_1:43287671-43287690 Msa0731780:intron 45.0%
AGGTACTTAAATCGTGCCCT+AGG + chr5_1:43288689-43288708 Msa0731780:intron 45.0%
GAAGGAGGAGAAACCATTAG+AGG - chr5_1:43288804-43288823 None:intergenic 45.0%
!! TTATATACTATTTATAATTT+CGG + chr5_1:43282052-43282071 Msa0731780:intron 5.0%
!! TTAAAAGTAAAAAAAAAATT+CGG - chr5_1:43286399-43286418 None:intergenic 5.0%
!!! TTTTTATTTATTTGTTAAAT+AGG + chr5_1:43289015-43289034 Msa0731780:intron 5.0%
!!! TTTTATTTATTTGTTAAATA+GGG + chr5_1:43289016-43289035 Msa0731780:intron 5.0%
!! TTTAGAAAATAATATTAAAT+AGG - chr5_1:43289508-43289527 None:intergenic 5.0%
GCTTCTCCTCCTTCTCTCTT+TGG + chr5_1:43281079-43281098 Msa0731780:five_prime_UTR 50.0%
GAGAGAGAAGAGAGTAGTGG+AGG - chr5_1:43281168-43281187 None:intergenic 50.0%
! CAAGCCCTTCTAGCTGATTC+TGG - chr5_1:43281888-43281907 None:intergenic 50.0%
ATGACTGAACCGGAACCACT+CGG + chr5_1:43282308-43282327 Msa0731780:intron 50.0%
ATCTAACCGAGTCATCCGAG+TGG - chr5_1:43282326-43282345 None:intergenic 50.0%
CTCGGATTGAATCGGTGACT+CGG + chr5_1:43282401-43282420 Msa0731780:intron 50.0%
AACCGGTCTGACCAATGACT+CGG + chr5_1:43282669-43282688 Msa0731780:intron 50.0%
ACCGGTAAAAACCGGTGACT+CGG - chr5_1:43282695-43282714 None:intergenic 50.0%
!! GCAGTTGACTCGGTCAAAAC+CGG - chr5_1:43282733-43282752 None:intergenic 50.0%
GATCGGTCATGCAGTTGACT+CGG - chr5_1:43282743-43282762 None:intergenic 50.0%
! GGAGGGGTACATATCAAGGT+GGG + chr5_1:43283190-43283209 Msa0731780:CDS 50.0%
! GAGGGGTACATATCAAGGTG+GGG + chr5_1:43283191-43283210 Msa0731780:CDS 50.0%
! AGGGGTACATATCAAGGTGG+GGG + chr5_1:43283192-43283211 Msa0731780:CDS 50.0%
TACATATCAAGGTGGGGGTG+TGG + chr5_1:43283197-43283216 Msa0731780:CDS 50.0%
! ACATATCAAGGTGGGGGTGT+GGG + chr5_1:43283198-43283217 Msa0731780:CDS 50.0%
GGGAGCAGTCAAGAGACATA+TGG - chr5_1:43283479-43283498 None:intergenic 50.0%
GACCTACTGTAATTGGAGGG+GGG - chr5_1:43283499-43283518 None:intergenic 50.0%
TCCACGGCAAACACATGTAG+TGG + chr5_1:43284190-43284209 Msa0731780:intron 50.0%
ACCACTACATGTGTTTGCCG+TGG - chr5_1:43284194-43284213 None:intergenic 50.0%
TCTTCTCAAGGGCCTTGGAA+TGG + chr5_1:43284671-43284690 Msa0731780:intron 50.0%
! CGTATTCAGGAGTGTAGGTG+GGG - chr5_1:43285622-43285641 None:intergenic 50.0%
! CCGTATTCAGGAGTGTAGGT+GGG - chr5_1:43285623-43285642 None:intergenic 50.0%
CCCACCTACACTCCTGAATA+CGG + chr5_1:43285620-43285639 Msa0731780:CDS 50.0%
CCACCTACACTCCTGAATAC+GGG + chr5_1:43285621-43285640 Msa0731780:CDS 50.0%
! GTACCCGTATTCAGGAGTGT+AGG - chr5_1:43285627-43285646 None:intergenic 50.0%
!! ACTTGAGGGTACCCGTATTC+AGG - chr5_1:43285635-43285654 None:intergenic 50.0%
GGAGGGAGATGCTTACTTGA+GGG - chr5_1:43285649-43285668 None:intergenic 50.0%
TATGCAAGCAGCACCACCAA+GGG + chr5_1:43285887-43285906 Msa0731780:CDS 50.0%
GCTTGTATGCGATGTGGTTG+GGG - chr5_1:43285927-43285946 None:intergenic 50.0%
CAGCTTGTATGCGATGTGGT+TGG - chr5_1:43285929-43285948 None:intergenic 50.0%
CAACCACATCGCATACAAGC+TGG + chr5_1:43285927-43285946 Msa0731780:CDS 50.0%
GCTCCTTCCATTGGTGTAGT+AGG - chr5_1:43285972-43285991 None:intergenic 50.0%
TTACCACTAGGAGAAGGGGT+AGG - chr5_1:43286050-43286069 None:intergenic 50.0%
CAGCTCATTCACATGGGTCT+TGG - chr5_1:43287467-43287486 None:intergenic 50.0%
CCCATGTGAATGAGCTGTCT+TGG + chr5_1:43287470-43287489 Msa0731780:intron 50.0%
AGAGAGAGAGAGAGTGAGAG+AGG + chr5_1:43287531-43287550 Msa0731780:intron 50.0%
GAGAGAGAGAGAGTGAGAGA+GGG + chr5_1:43287532-43287551 Msa0731780:intron 50.0%
TGGCAGGACAAAGAAAGGGT+AGG + chr5_1:43287676-43287695 Msa0731780:intron 50.0%
GGCAGGACAAAGAAAGGGTA+GGG + chr5_1:43287677-43287696 Msa0731780:intron 50.0%
ACTTTCCACAGCTGCAAGGA+CGG + chr5_1:43287734-43287753 Msa0731780:intron 50.0%
AGCTGCAAGGACGGAAACAA+GGG + chr5_1:43287743-43287762 Msa0731780:intron 50.0%
ACCTCATCAGAGACAGCATC+TGG + chr5_1:43289675-43289694 Msa0731780:CDS 50.0%
TCCAGATGCTGTCTCTGATG+AGG - chr5_1:43289679-43289698 None:intergenic 50.0%
TGCTGGCCAAAGAGAGAAGG+AGG - chr5_1:43281088-43281107 None:intergenic 55.0%
! GCTTGCTGGCCAAAGAGAGA+AGG - chr5_1:43281091-43281110 None:intergenic 55.0%
!! CCTCTTGGTGGTGATGGTCT+AGG - chr5_1:43281975-43281994 None:intergenic 55.0%
CCTAGACCATCACCACCAAG+AGG + chr5_1:43281972-43281991 Msa0731780:CDS 55.0%
GTACTGGGTCACTGGGTCAA+TGG + chr5_1:43282256-43282275 Msa0731780:intron 55.0%
TGGTCGAACCACTGAGTCGT+TGG + chr5_1:43282276-43282295 Msa0731780:intron 55.0%
GTCGAACCGCATGACTGAAC+CGG + chr5_1:43282298-43282317 Msa0731780:intron 55.0%
GTGGTTCCGGTTCAGTCATG+CGG - chr5_1:43282307-43282326 None:intergenic 55.0%
!!! GCCGAGTCACCGGTTTTTAC+CGG + chr5_1:43282691-43282710 Msa0731780:intron 55.0%
!! AGCCGGTTCGAGCCAACATT+TGG - chr5_1:43282765-43282784 None:intergenic 55.0%
!!! TTTTCAGACTCGGCTCGGAC+CGG - chr5_1:43282823-43282842 None:intergenic 55.0%
! GCAGGGAGGGGTACATATCA+AGG + chr5_1:43283186-43283205 Msa0731780:intron 55.0%
! GGGAGGGGTACATATCAAGG+TGG + chr5_1:43283189-43283208 Msa0731780:intron 55.0%
! CATATCAAGGTGGGGGTGTG+GGG + chr5_1:43283199-43283218 Msa0731780:CDS 55.0%
! GTTGCTCCTCCTGCCATTTG+TGG - chr5_1:43283279-43283298 None:intergenic 55.0%
!! GTCAAAGGGGTACTGGTCCA+TGG + chr5_1:43283411-43283430 Msa0731780:intron 55.0%
CTCCCCCCTCCAATTACAGT+AGG + chr5_1:43283494-43283513 Msa0731780:intron 55.0%
!! GTGACGAATAGGATTGGCCG+TGG + chr5_1:43284554-43284573 Msa0731780:intron 55.0%
!! ACGAATAGGATTGGCCGTGG+AGG + chr5_1:43284557-43284576 Msa0731780:intron 55.0%
ACGGTTCTTCTCAAGGGCCT+TGG + chr5_1:43284666-43284685 Msa0731780:intron 55.0%
! CCCGTATTCAGGAGTGTAGG+TGG - chr5_1:43285624-43285643 None:intergenic 55.0%
GGGAGGGAGATGCTTACTTG+AGG - chr5_1:43285650-43285669 None:intergenic 55.0%
CTATGCAAGCAGCACCACCA+AGG + chr5_1:43285886-43285905 Msa0731780:CDS 55.0%
ATGCAAGCAGCACCACCAAG+GGG + chr5_1:43285888-43285907 Msa0731780:CDS 55.0%
GGTCCAGCTTGTATGCGATG+TGG - chr5_1:43285933-43285952 None:intergenic 55.0%
CTAGGAGAAGGGGTAGGAGA+AGG - chr5_1:43286044-43286063 None:intergenic 55.0%
TCTCCTACCCCTTCTCCTAG+TGG + chr5_1:43286044-43286063 Msa0731780:CDS 55.0%
TGGGTCTTGGGTTACCCATG+TGG - chr5_1:43287454-43287473 None:intergenic 55.0%
AGAGAGGGTCAGAGTGAGAG+AGG + chr5_1:43287547-43287566 Msa0731780:intron 55.0%
GAGAGGGTCAGAGTGAGAGA+GGG + chr5_1:43287548-43287567 Msa0731780:intron 55.0%
TGTTTCCGTCCTTGCAGCTG+TGG - chr5_1:43287742-43287761 None:intergenic 55.0%
CAGCTGCAAGGACGGAAACA+AGG + chr5_1:43287742-43287761 Msa0731780:intron 55.0%
!! ACTCGGCTCGGTCATCGACT+CGG + chr5_1:43282228-43282247 Msa0731780:intron 60.0%
CGGTTCGACCAACGACTCAG+TGG - chr5_1:43282287-43282306 None:intergenic 60.0%
CCGAGTCATCCGAGTGGTTC+CGG - chr5_1:43282320-43282339 None:intergenic 60.0%
CCGGAACCACTCGGATGACT+CGG + chr5_1:43282317-43282336 Msa0731780:intron 60.0%
GGCCGAGTCATTGGTCAGAC+CGG - chr5_1:43282674-43282693 None:intergenic 60.0%
! CAATGACTCGGCCGAGTCAC+CGG + chr5_1:43282681-43282700 Msa0731780:intron 60.0%
ATTTGTGGTGGCCCTCCTGC+CGG - chr5_1:43283264-43283283 None:intergenic 60.0%
! GCTCCTCCTGCCATTTGTGG+TGG - chr5_1:43283276-43283295 None:intergenic 60.0%
TGTGGACACAGGGGTCCACA+TGG + chr5_1:43287436-43287455 Msa0731780:intron 60.0%
GTGGACACAGGGGTCCACAT+GGG + chr5_1:43287437-43287456 Msa0731780:intron 60.0%
!! ATCGACTCGGCGGGGGTACT+GGG + chr5_1:43282241-43282260 Msa0731780:intron 65.0%
! CGGTGACTCGGCCGAGTCAT+TGG - chr5_1:43282683-43282702 None:intergenic 65.0%
! GCTCGAACCGGCTTACCCAC+CGG + chr5_1:43282772-43282791 Msa0731780:intron 65.0%
CCGTGAACCGGTGGGTAAGC+CGG - chr5_1:43282782-43282801 None:intergenic 65.0%
!! CCGGCTTACCCACCGGTTCA+CGG + chr5_1:43282779-43282798 Msa0731780:intron 65.0%
!! AGGAGCACCAGGAGCAGCAG+CGG + chr5_1:43283224-43283243 Msa0731780:CDS 65.0%
GGCAGGAGGGCCACCACAAA+TGG + chr5_1:43283263-43283282 Msa0731780:CDS 65.0%
GGAGGGCCACCACAAATGGC+AGG + chr5_1:43283267-43283286 Msa0731780:CDS 65.0%
GGGCCACCACAAATGGCAGG+AGG + chr5_1:43283270-43283289 Msa0731780:CDS 65.0%
!! CGGCTCGGTCATCGACTCGG+CGG + chr5_1:43282231-43282250 Msa0731780:intron 70.0%
!! GGCTCGGTCATCGACTCGGC+GGG + chr5_1:43282232-43282251 Msa0731780:intron 70.0%
!! GCTCGGTCATCGACTCGGCG+GGG + chr5_1:43282233-43282252 Msa0731780:intron 70.0%
!! CTCGGTCATCGACTCGGCGG+GGG + chr5_1:43282234-43282253 Msa0731780:intron 70.0%
!! CATCGACTCGGCGGGGGTAC+TGG + chr5_1:43282240-43282259 Msa0731780:intron 70.0%
!! GGCGGGGGTACTGGGTCACT+GGG + chr5_1:43282249-43282268 Msa0731780:intron 70.0%
CGGTCGGACCGTGAACCGGT+GGG - chr5_1:43282790-43282809 None:intergenic 70.0%
!! CCACCGGTTCACGGTCCGAC+CGG + chr5_1:43282788-43282807 Msa0731780:intron 70.0%
GGACCGGTCGGACCGTGAAC+CGG - chr5_1:43282794-43282813 None:intergenic 70.0%
! CAAGGTGGGGGTGTGGGGAC+AGG + chr5_1:43283204-43283223 Msa0731780:CDS 70.0%
!! GGTGTGGGGACAGGAGCACC+AGG + chr5_1:43283213-43283232 Msa0731780:CDS 70.0%
CCAGGAGCAGCAGCGGCGTA+CGG + chr5_1:43283231-43283250 Msa0731780:CDS 70.0%
AGCGGCGTACGGCGGTGTTC+CGG + chr5_1:43283242-43283261 Msa0731780:CDS 70.0%
TACGGCGGTGTTCCGGCAGG+AGG + chr5_1:43283249-43283268 Msa0731780:CDS 70.0%
ACGGCGGTGTTCCGGCAGGA+GGG + chr5_1:43283250-43283269 Msa0731780:CDS 70.0%
!! CGGCGGGGGTACTGGGTCAC+TGG + chr5_1:43282248-43282267 Msa0731780:intron 75.0%
CCGGTCGGACCGTGAACCGG+TGG - chr5_1:43282791-43282810 None:intergenic 75.0%
CACGGTCCGACCGGTCCGAC+CGG + chr5_1:43282797-43282816 Msa0731780:intron 75.0%
!! CAGACTCGGCTCGGACCGGC+CGG - chr5_1:43282819-43282838 None:intergenic 75.0%
CCGTACGCCGCTGCTGCTCC+TGG - chr5_1:43283234-43283253 None:intergenic 75.0%
GGAGCAGCAGCGGCGTACGG+CGG + chr5_1:43283234-43283253 Msa0731780:CDS 75.0%
GCGTACGGCGGTGTTCCGGC+AGG + chr5_1:43283246-43283265 Msa0731780:CDS 75.0%
! GTCCGACCGGTCCGACCGGC+CGG + chr5_1:43282801-43282820 Msa0731780:intron 80.0%
! GACCGGCCGGTCGGACCGGT+CGG - chr5_1:43282806-43282825 None:intergenic 80.0%
! CTCGGACCGGCCGGTCGGAC+CGG - chr5_1:43282810-43282829 None:intergenic 80.0%
!!! CTCGGCTCGGACCGGCCGGT+CGG - chr5_1:43282815-43282834 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 43281028 43289992 43281028 ID=Msa0731780;Name=Msa0731780
chr5_1 mRNA 43281028 43289992 43281028 ID=Msa0731780-mRNA-1;Parent=Msa0731780;Name=Msa0731780-mRNA-1;_AED=0.09;_eAED=0.09;_QI=559|1|1|1|1|1|6|243|285
chr5_1 exon 43281028 43281769 43281028 ID=Msa0731780-mRNA-1:exon:12362;Parent=Msa0731780-mRNA-1
chr5_1 exon 43281870 43281993 43281870 ID=Msa0731780-mRNA-1:exon:12363;Parent=Msa0731780-mRNA-1
chr5_1 exon 43283190 43283328 43283190 ID=Msa0731780-mRNA-1:exon:12364;Parent=Msa0731780-mRNA-1
chr5_1 exon 43285616 43285652 43285616 ID=Msa0731780-mRNA-1:exon:12365;Parent=Msa0731780-mRNA-1
chr5_1 exon 43285786 43286065 43285786 ID=Msa0731780-mRNA-1:exon:12366;Parent=Msa0731780-mRNA-1
chr5_1 exon 43289655 43289992 43289655 ID=Msa0731780-mRNA-1:exon:12367;Parent=Msa0731780-mRNA-1
chr5_1 five_prime_UTR 43281028 43281586 43281028 ID=Msa0731780-mRNA-1:five_prime_utr;Parent=Msa0731780-mRNA-1
chr5_1 CDS 43281587 43281769 43281587 ID=Msa0731780-mRNA-1:cds;Parent=Msa0731780-mRNA-1
chr5_1 CDS 43281870 43281993 43281870 ID=Msa0731780-mRNA-1:cds;Parent=Msa0731780-mRNA-1
chr5_1 CDS 43283190 43283328 43283190 ID=Msa0731780-mRNA-1:cds;Parent=Msa0731780-mRNA-1
chr5_1 CDS 43285616 43285652 43285616 ID=Msa0731780-mRNA-1:cds;Parent=Msa0731780-mRNA-1
chr5_1 CDS 43285786 43286065 43285786 ID=Msa0731780-mRNA-1:cds;Parent=Msa0731780-mRNA-1
chr5_1 CDS 43289655 43289749 43289655 ID=Msa0731780-mRNA-1:cds;Parent=Msa0731780-mRNA-1
chr5_1 three_prime_UTR 43289750 43289992 43289750 ID=Msa0731780-mRNA-1:three_prime_utr;Parent=Msa0731780-mRNA-1
Gene Sequence

>Msa0731780

ATGGCTTATCCACATTATCGATCACAATTTGGAGACACAACATTTACTAAGGTTTTTGTTGGAGGACTAGCTTGGGAAACTCCAACTGATGAAATGAGGACATATTTTGAACAATTTGGTGACATACTTGAAGCTGTCATTATCACTGATAAGAATACAGGAAAATCTAAAGGATACGGATTTGTAACATTTCGTGATCCAGAATCAGCTAGAAGGGCTTGTGCTGATCCAAACCCAGTAATTGATGGAAGAAGAGCTAATTGTAACATTGCTTCTCTTGGTCGTCCTAGACCATCACCACCAAGAGGGAGGGGTACATATCAAGGTGGGGGTGTGGGGACAGGAGCACCAGGAGCAGCAGCGGCGTACGGCGGTGTTCCGGCAGGAGGGCCACCACAAATGGCAGGAGGAGCAACAGCAGCTCCAGTGATGTACCAACCATATGGCTACCCCACCTACACTCCTGAATACGGGTACCCTCAAGCCACAATGTATAACCCACAGATTCAGCAAGCACAATACTATCAACAACTTTATGGACCATCATCTTCAACAATGGGTTCACCATATTATTATGGCTATTCTATGCAAGCAGCACCACCAAGGGGTACATTTTCAACACCCCAACCACATCGCATACAAGCTGGACCATCCTATCTATACTACCCTACTACACCAATGGAAGGAGCAACTTTCTCTGCTGCATATCGTCCACTTCAACAACCATTAATAAGGCAACCTTCTCCTACCCCTTCTCCTAGTGATTCACAGATTCAGCAACGTACCTCATCAGAGACAGCATCTGGAGTAGTTATAACTTCGGAAAGTTCAAATACTCAAGGGAAGAACAACAACTAA
Protein sequence

>Msa0731780

MAYPHYRSQFGDTTFTKVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTYQGGGVGTGAPGAAAAYGGVPAGGPPQMAGGATAAPVMYQPYGYPTYTPEYGYPQATMYNPQIQQAQYYQQLYGPSSSTMGSPYYYGYSMQAAPPRGTFSTPQPHRIQAGPSYLYYPTTPMEGATFSAAYRPLQQPLIRQPSPTPSPSDSQIQQRTSSETASGVVITSESSNTQGKNNN*