AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1294280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1294280 MtrunA17_Chr8g0370931 95.370 432 14 1 1 432 1 426 0.0 848
Msa1294280 MtrunA17_Chr6g0464791 55.502 209 93 0 20 228 6 214 3.31e-81 261
Msa1294280 MtrunA17_Chr1g0209771 53.535 198 92 0 21 218 7 204 7.92e-77 242
Msa1294280 MtrunA17_Chr6g0487991 52.500 200 95 0 21 220 1 200 3.80e-68 234
Msa1294280 MtrunA17_Chr4g0042021 39.662 237 129 4 26 249 6 241 4.87e-45 160
Msa1294280 MtrunA17_Chr2g0324121 39.896 193 103 2 21 201 5 196 1.33e-40 152
Msa1294280 MtrunA17_Chr1g0210081 40.678 177 104 1 20 195 7 183 2.96e-39 145
Msa1294280 MtrunA17_Chr7g0214961 38.372 172 105 1 19 190 1 171 2.01e-34 133
Msa1294280 MtrunA17_Chr4g0004491 37.234 188 107 4 29 216 15 191 1.28e-30 120
Msa1294280 MtrunA17_Chr8g0390551 34.211 190 115 2 20 209 4 183 3.30e-29 120
Msa1294280 MtrunA17_Chr2g0331801 34.066 182 111 2 29 210 12 184 1.28e-27 114
Msa1294280 MtrunA17_Chr6g0485461 33.862 189 115 2 11 199 51 229 2.40e-26 112
Msa1294280 MtrunA17_Chr7g0262101 28.235 170 118 1 29 198 19 184 1.32e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1294280 AT4G35730.1 54.604 467 171 8 1 430 1 463 5.54e-154 444
Msa1294280 AT1G34220.2 54.545 209 95 0 20 228 6 214 2.89e-79 257
Msa1294280 AT1G34220.1 48.117 239 94 1 20 228 6 244 1.53e-73 243
Msa1294280 AT1G25420.1 51.010 198 97 0 21 218 7 204 1.72e-72 231
Msa1294280 AT1G25420.4 52.571 175 83 0 42 216 1 175 2.19e-65 211
Msa1294280 AT2G19710.1 39.928 278 162 2 21 294 4 280 6.02e-62 216
Msa1294280 AT4G29440.1 48.901 182 92 1 21 202 4 184 1.04e-56 202
Msa1294280 AT4G29440.2 50.000 156 77 1 47 202 2 156 1.78e-48 178
Msa1294280 AT1G25420.3 51.111 135 66 0 84 218 2 136 5.79e-47 162
Msa1294280 AT1G25420.2 51.111 135 66 0 84 218 2 136 5.79e-47 162
Msa1294280 AT1G13340.1 37.500 176 110 0 20 195 7 182 2.91e-36 138
Msa1294280 AT1G79910.1 27.160 405 249 13 29 425 12 378 5.16e-32 125
Msa1294280 AT2G14830.1 35.714 168 108 0 28 195 11 178 3.21e-31 123
Msa1294280 AT1G52315.1 34.118 170 102 3 30 198 13 173 2.83e-29 117
Msa1294280 AT4G32350.1 33.333 189 116 2 20 208 4 182 3.19e-28 118
Msa1294280 AT4G32350.3 33.333 189 116 2 20 208 4 182 3.19e-28 118
Msa1294280 AT1G79910.3 28.782 271 164 9 74 343 2 244 3.37e-23 100
Msa1294280 AT1G79910.2 29.151 271 163 9 74 343 43 285 1.06e-22 99.4
Msa1294280 AT1G52315.2 33.913 115 66 3 85 198 18 123 4.17e-19 87.8
Msa1294280 AT1G51900.1 29.282 181 118 4 21 192 1 180 7.87e-17 83.6
Msa1294280 AT3G15490.1 27.632 152 106 2 52 200 1 151 3.68e-13 68.9
Msa1294280 AT4G32350.2 33.981 103 59 1 106 208 1 94 2.00e-12 69.7

Find 119 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAAATGGGGTTGGGGTTT+TGG 0.144784 8_3:-52078002 None:intergenic
TCATCATAATCTGGCAATTT+AGG 0.180996 8_3:-52081327 None:intergenic
AATATTATTAGGAATTTAAT+TGG 0.213985 8_3:-52081623 None:intergenic
ACTCATACTATTAGCTCTTC+TGG 0.261166 8_3:-52080257 None:intergenic
AAGATGCCACTGCTCGTATC+AGG 0.268156 8_3:+52078341 Msa1294280:CDS
TTCTAAGAATGTCGTAATAT+TGG 0.276533 8_3:+52081491 Msa1294280:three_prime_UTR
TAGAACTTATCATTGTAATA+TGG 0.284835 8_3:-52080979 None:intergenic
GTGTAACGGTGTGCTGAAAA+AGG 0.291621 8_3:-52077956 None:intergenic
AATAGAGCTGCAATATTATT+AGG 0.292839 8_3:-52081634 None:intergenic
TGCTGAATTTGCTTCTTATA+TGG 0.294370 8_3:+52080927 Msa1294280:CDS
TGTTTGATTCACCTTGTTGC+TGG 0.294763 8_3:-52080464 None:intergenic
GGAGAGAGAAAGAGAGAAAT+GGG 0.304479 8_3:-52078015 None:intergenic
AAAAGGGAATATAGCGAAAA+AGG 0.307385 8_3:-52077939 None:intergenic
TTCTTTAGTGATACAAGTTC+TGG 0.309498 8_3:-52079875 None:intergenic
TTCTTCATCTGTGGCTAAAC+AGG 0.330976 8_3:+52081284 Msa1294280:CDS
TGTGAATTGATCAGATTATC+AGG 0.338034 8_3:+52080817 Msa1294280:intron
CTAAGGAATATCAAATTGAT+TGG 0.361119 8_3:+52080198 Msa1294280:CDS
TGCTTCTTATATGGCTATGA+AGG 0.361505 8_3:+52080936 Msa1294280:CDS
AGAAAGAGAGAAATGGGGTT+GGG 0.365019 8_3:-52078009 None:intergenic
CTTTGCAATAATTGAGAGTC+TGG 0.366938 8_3:-52079701 None:intergenic
ACAGGTGGTGGAAGCCGTTT+AGG 0.368484 8_3:-52081258 None:intergenic
TGGAGAGAGAAAGAGAGAAA+TGG 0.369290 8_3:-52078016 None:intergenic
CAATATTGGATGCCATAGTT+TGG 0.370079 8_3:+52081535 Msa1294280:three_prime_UTR
AAGCTCACTCTCGCTCTTCT+CGG 0.377397 8_3:+52078094 Msa1294280:CDS
TTGATAAGTGGTTGCTCAAA+GGG 0.408576 8_3:-52081400 None:intergenic
CGTTTAGGTGGGAAAGTAAC+TGG 0.414437 8_3:-52081243 None:intergenic
GATGAGAGAGCAAAATGTTT+TGG 0.417066 8_3:+52079636 Msa1294280:CDS
AAAATCTTTGAGAAGAAATA+CGG 0.420676 8_3:+52079896 Msa1294280:CDS
ATTGCGATGCTTCTTCAGTC+TGG 0.424706 8_3:+52078316 Msa1294280:CDS
CAGTTACTTTCCCACCTAAA+CGG 0.425350 8_3:+52081244 Msa1294280:CDS
GTGGTTGCTCAAAGGGTTCA+TGG 0.435124 8_3:-52081393 None:intergenic
AATAAAGTTAAAAGTATTGA+AGG 0.443439 8_3:+52080169 Msa1294280:CDS
GAACAATGTGTACCAAACTA+TGG 0.443658 8_3:-52081547 None:intergenic
GAAAGAGAGAAATGGGGTTG+GGG 0.450819 8_3:-52078008 None:intergenic
ATTCCTTCTTTCAAATCAGC+AGG 0.458294 8_3:-52079812 None:intergenic
TGCTGGCTTATTTGACTCCA+TGG 0.458613 8_3:-52080447 None:intergenic
CAGTAAAACAGCGGCGAAGA+TGG 0.458739 8_3:+52078228 Msa1294280:intron
GCAGTGAGTTCATCATAATC+TGG 0.471398 8_3:-52081336 None:intergenic
GAGAAAGAGAGAAATGGGGT+TGG 0.472141 8_3:-52078010 None:intergenic
TAAGGAATATCAAATTGATT+GGG 0.478076 8_3:+52080199 Msa1294280:CDS
TGTTGAATTCTTCACTGGTA+AGG 0.481821 8_3:-52080417 None:intergenic
GGCTGTGGTTACAACCGTCA+TGG 0.484877 8_3:-52078047 None:intergenic
ACAGTTGTTGAATTCTTCAC+TGG 0.487819 8_3:-52080422 None:intergenic
TTTAGGATGAACACGGATGT+TGG 0.495965 8_3:-52081310 None:intergenic
TGTCCTGCTGATTTGAAAGA+AGG 0.500030 8_3:+52079809 Msa1294280:CDS
CTTCGTGCGTGCGGTGGCTG+TGG 0.501207 8_3:-52078062 None:intergenic
ACTCTCGCTCTTCTCGGTCT+CGG 0.502904 8_3:+52078100 Msa1294280:CDS
GCTGTGGTTACAACCGTCAT+GGG 0.504826 8_3:-52078046 None:intergenic
GCGGCTGAATGTGCAGAAGC+TGG 0.505056 8_3:-52081153 None:intergenic
CTGGAATTTCTGAGCACCTA+GGG 0.506416 8_3:-52079856 None:intergenic
GAGGAACAAGAGGGAGGTTG+TGG 0.506730 8_3:+52078273 Msa1294280:CDS
GCTTAATATTTGCAGCCCCT+AGG 0.509482 8_3:+52079840 Msa1294280:CDS
TCGGCTTCAATTCCTCCAAA+TGG 0.511196 8_3:+52078119 Msa1294280:CDS
CTTAGAATCTTCAAAATGCA+TGG 0.519506 8_3:-52080857 None:intergenic
ATTCTTCACTGGTAAGGTGC+TGG 0.519990 8_3:-52080411 None:intergenic
GAATTCAACAACTGTTTCCA+TGG 0.521775 8_3:+52080430 Msa1294280:CDS
GATGAAGAAGGTACAGGTGG+TGG 0.529604 8_3:-52081270 None:intergenic
TCTCCACCGTTTCCCCATGA+CGG 0.531690 8_3:+52078033 Msa1294280:exon
CGGCGAAGATGGCGGTGGCG+AGG 0.535501 8_3:+52078239 Msa1294280:CDS
ACCTGTACCTTCTTCATCTG+TGG 0.539816 8_3:+52081275 Msa1294280:CDS
TTTGATAAGTGGTTGCTCAA+AGG 0.542396 8_3:-52081401 None:intergenic
TTACAACCGTCATGGGGAAA+CGG 0.542729 8_3:-52078039 None:intergenic
ATCATTGTAATATGGTTGAG+AGG 0.546658 8_3:-52080971 None:intergenic
TTAGTTGATTGACAAGCTCT+CGG 0.549789 8_3:+52080127 Msa1294280:intron
AGTATTGAAGGAAATTGCTA+AGG 0.561609 8_3:+52080181 Msa1294280:CDS
TTGATCAGATTATCAGGCGG+TGG 0.562391 8_3:+52080823 Msa1294280:intron
CACGATCCTCTTCGTGCGTG+CGG 0.566243 8_3:-52078071 None:intergenic
TTAAGCTGTTGAGGAACAAG+AGG 0.566894 8_3:+52078263 Msa1294280:CDS
GGATCCATCGTATGGTGGAA+AGG 0.571212 8_3:+52081107 Msa1294280:CDS
AATATCTGAATGTGCAGAAG+CGG 0.574083 8_3:-52081172 None:intergenic
TGCAAAATATACTCACAACT+TGG 0.575796 8_3:+52081011 Msa1294280:CDS
AATGTAATAATACCATTTGG+AGG 0.576078 8_3:-52078131 None:intergenic
GATCCTCTTCGTGCGTGCGG+TGG 0.577744 8_3:-52078068 None:intergenic
AAATCTTTGAGAAGAAATAC+GGG 0.578746 8_3:+52079897 Msa1294280:CDS
AACAGCGGCGAAGATGGCGG+TGG 0.580976 8_3:+52078234 Msa1294280:CDS
GGTGGTGGAAGCCGTTTAGG+TGG 0.585131 8_3:-52081255 None:intergenic
TAGCTGTGGTGTTAACCGCC+AGG 0.590524 8_3:+52079955 Msa1294280:CDS
GCCACAGATGAAGAAGGTAC+AGG 0.590998 8_3:-52081276 None:intergenic
TGGCGAGGATTAAGCTGTTG+AGG 0.592976 8_3:+52078254 Msa1294280:CDS
TGTTTAGCCACAGATGAAGA+AGG 0.593150 8_3:-52081282 None:intergenic
AGATGCCACTGCTCGTATCA+GGG 0.597617 8_3:+52078342 Msa1294280:CDS
TCTCAATTATTGCAAAGCAA+AGG 0.598031 8_3:+52079707 Msa1294280:CDS
CTTGGCTCATAAATCAACAA+TGG 0.600438 8_3:+52081029 Msa1294280:CDS
TGGAATTTCTGAGCACCTAG+GGG 0.600657 8_3:-52079855 None:intergenic
GAGAGAGAAAGAGAGAAATG+GGG 0.603979 8_3:-52078014 None:intergenic
AACAACGAGGATCCATCGTA+TGG 0.605694 8_3:+52081099 Msa1294280:CDS
GCTATTCTGTGAATTAATTG+TGG 0.606052 8_3:+52079678 Msa1294280:CDS
TCTGGAATTTCTGAGCACCT+AGG 0.607005 8_3:-52079857 None:intergenic
CTGAATGTGCAGAAGCTGGA+TGG 0.620241 8_3:-52081149 None:intergenic
CTTTGAGAAGAAATACGGGA+GGG 0.621405 8_3:+52079901 Msa1294280:CDS
TTGTTCATGTGATCAGACCT+TGG 0.623688 8_3:-52081081 None:intergenic
CTGGCAATTTAGGATGAACA+CGG 0.632226 8_3:-52081317 None:intergenic
AGCAGCTAAGAAAGCAATCG+CGG 0.634890 8_3:+52080903 Msa1294280:CDS
GGCTCATAAATCAACAATGG+AGG 0.635642 8_3:+52081032 Msa1294280:CDS
CATACTATTAGCTCTTCTGG+AGG 0.636186 8_3:-52080254 None:intergenic
TAAAACAGCGGCGAAGATGG+CGG 0.636356 8_3:+52078231 Msa1294280:CDS
ACAAGAGGGAGGTTGTGGTG+AGG 0.637537 8_3:+52078278 Msa1294280:CDS
GTGGTGGAAGCCGTTTAGGT+GGG 0.639223 8_3:-52081254 None:intergenic
TAATCCTTTCCACCATACGA+TGG 0.639277 8_3:-52081111 None:intergenic
AACGAGGATCCATCGTATGG+TGG 0.640263 8_3:+52081102 Msa1294280:CDS
CAATGGAGGAGAAAATGCAC+AGG 0.642705 8_3:+52081046 Msa1294280:CDS
TGGCGGTTAACACCACAGCT+AGG 0.644899 8_3:-52079953 None:intergenic
ACAAGAGAAGAGAAGTGTAA+CGG 0.657785 8_3:-52077970 None:intergenic
GAAATTAATATAATACGTGG+TGG 0.664431 8_3:-52081572 None:intergenic
CAACCGTCATGGGGAAACGG+TGG 0.674781 8_3:-52078036 None:intergenic
AGTCAAATAAGCCAGCAACA+AGG 0.682164 8_3:+52080453 Msa1294280:CDS
GCTGTTGAGGAACAAGAGGG+AGG 0.684040 8_3:+52078267 Msa1294280:CDS
ACAGATGAAGAAGGTACAGG+TGG 0.685488 8_3:-52081273 None:intergenic
TCTTTGAGAAGAAATACGGG+AGG 0.686451 8_3:+52079900 Msa1294280:CDS
AATTACCCTGATACGAGCAG+TGG 0.691637 8_3:-52078347 None:intergenic
CTGTGGTTACAACCGTCATG+GGG 0.702488 8_3:-52078045 None:intergenic
TTTAACTTTATTTCACCGGG+AGG 0.704442 8_3:-52080158 None:intergenic
TAAGCTGTTGAGGAACAAGA+GGG 0.707139 8_3:+52078264 Msa1294280:CDS
ACGGATCTTAGACCTAGCTG+TGG 0.708544 8_3:+52079941 Msa1294280:CDS
TTAGGTGGGAAAGTAACTGG+AGG 0.709094 8_3:-52081240 None:intergenic
ATTGAAATTAATATAATACG+TGG 0.713719 8_3:-52081575 None:intergenic
ACAGGTCGCATAGCTTACCA+AGG 0.727675 8_3:+52081064 Msa1294280:CDS
GAATTGATCAGATTATCAGG+CGG 0.765894 8_3:+52080820 Msa1294280:intron
GTCTGATCACATGAACAACG+AGG 0.815512 8_3:+52081086 Msa1294280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAGAAATAAATTAATG+TGG + chr8_3:52078195-52078214 Msa1294280:intron 10.0%
!!! ACTTTTTTTATTTACAATAT+TGG + chr8_3:52081521-52081540 Msa1294280:three_prime_UTR 10.0%
!! AATATTATTAGGAATTTAAT+TGG - chr8_3:52081626-52081645 None:intergenic 10.0%
!!! TGAATGTTATGTTTTAAATA+TGG + chr8_3:52078607-52078626 Msa1294280:intron 15.0%
!!! TTTTATAAAAATAGAGCATT+TGG + chr8_3:52078991-52079010 Msa1294280:intron 15.0%
!!! TGGTTTGATAATATAATTTT+TGG + chr8_3:52079484-52079503 Msa1294280:intron 15.0%
!!! GGTTTGATAATATAATTTTT+GGG + chr8_3:52079485-52079504 Msa1294280:intron 15.0%
!!! GATTTTTAACAAGATTTTAT+TGG + chr8_3:52079595-52079614 Msa1294280:intron 15.0%
!!! TTTTAGTTAAACTATTATGA+AGG + chr8_3:52079748-52079767 Msa1294280:intron 15.0%
!!! AATAAAGTTAAAAGTATTGA+AGG + chr8_3:52080169-52080188 Msa1294280:CDS 15.0%
!! TAGGATTATCATATATAAAT+AGG + chr8_3:52080573-52080592 Msa1294280:intron 15.0%
!! ATTATCATATATAAATAGGA+AGG + chr8_3:52080577-52080596 Msa1294280:intron 15.0%
!! ATTGAAATTAATATAATACG+TGG - chr8_3:52081578-52081597 None:intergenic 15.0%
!!! CATTTTGTTTAACTTAATAG+TGG + chr8_3:52078766-52078785 Msa1294280:intron 20.0%
!! TCGTTCTTAAGAATAATTTA+CGG - chr8_3:52078964-52078983 None:intergenic 20.0%
!! TTCTATAAAGATAGATTGTT+TGG + chr8_3:52079058-52079077 Msa1294280:intron 20.0%
!! TTTGTAAAAGATAGAGAATT+TGG + chr8_3:52079126-52079145 Msa1294280:intron 20.0%
!! CAGAAATTTATTCTTAAGAA+TGG + chr8_3:52079095-52079114 Msa1294280:intron 20.0%
!! TTCTATAAAAATACAGCATT+TGG + chr8_3:52079351-52079370 Msa1294280:intron 20.0%
!! TTATTAACGATATAGCATTT+CGG + chr8_3:52079419-52079438 Msa1294280:intron 20.0%
!!! ACAAGATTTTATTGGATTAT+AGG + chr8_3:52079603-52079622 Msa1294280:intron 20.0%
!!! AAAATCTTTGAGAAGAAATA+CGG + chr8_3:52079896-52079915 Msa1294280:CDS 20.0%
!!! TACTTTTAACTTTATTTCAC+CGG - chr8_3:52080165-52080184 None:intergenic 20.0%
!! TAAGGAATATCAAATTGATT+GGG + chr8_3:52080199-52080218 Msa1294280:CDS 20.0%
!! ACATATAACATACAGAAAAA+TGG - chr8_3:52080305-52080324 None:intergenic 20.0%
!! AGAAAAGTTATTAGTTAATG+AGG + chr8_3:52080546-52080565 Msa1294280:intron 20.0%
!!! ATATATAAATAGGAAGGTTT+TGG + chr8_3:52080583-52080602 Msa1294280:intron 20.0%
!! CTGAAGAAAATGAAAAAAAT+AGG - chr8_3:52080701-52080720 None:intergenic 20.0%
!! TCTAATTTCAATCCAATTAT+TGG + chr8_3:52080732-52080751 Msa1294280:intron 20.0%
!! CTAATTTCAATCCAATTATT+GGG + chr8_3:52080733-52080752 Msa1294280:intron 20.0%
!! AAGAACGATATAATTCATAA+AGG - chr8_3:52080780-52080799 None:intergenic 20.0%
!! TAGAACTTATCATTGTAATA+TGG - chr8_3:52080982-52081001 None:intergenic 20.0%
! AATGTAATAATACCATTTGG+AGG - chr8_3:52078134-52078153 None:intergenic 25.0%
! GAGAATGTAATAATACCATT+TGG - chr8_3:52078137-52078156 None:intergenic 25.0%
!! TATGTTGTTGATTGAAGAAT+TGG + chr8_3:52078166-52078185 Msa1294280:intron 25.0%
!! ATGTTGTTGATTGAAGAATT+GGG + chr8_3:52078167-52078186 Msa1294280:intron 25.0%
! ACAATTAACACAATCATGTT+TGG - chr8_3:52078575-52078594 None:intergenic 25.0%
!!! TTAAATATGGAGTAGTTTTG+TGG + chr8_3:52078620-52078639 Msa1294280:intron 25.0%
! AATTCAAGCAACAACAAATT+TGG - chr8_3:52078745-52078764 None:intergenic 25.0%
! GTGTACAGAAAATTATTCTT+AGG + chr8_3:52079023-52079042 Msa1294280:intron 25.0%
! CAATCTATCTTTATAGAATG+CGG - chr8_3:52079056-52079075 None:intergenic 25.0%
!! GACAGAATTTTTCTTATGAA+TGG + chr8_3:52079161-52079180 Msa1294280:intron 25.0%
!!! TTTTGTAAAGATAGAGCATT+TGG + chr8_3:52079284-52079303 Msa1294280:intron 25.0%
! CAGAAAATTATTCTTAAGAG+TGG + chr8_3:52079321-52079340 Msa1294280:intron 25.0%
!!! ATTTTTGGGATTAGTTGTAA+TGG + chr8_3:52079499-52079518 Msa1294280:intron 25.0%
!! TGTCTTTTTCTTTTCGATAT+TGG + chr8_3:52079558-52079577 Msa1294280:intron 25.0%
!! GTCTTTTTCTTTTCGATATT+GGG + chr8_3:52079559-52079578 Msa1294280:intron 25.0%
!! AAATCTTTGAGAAGAAATAC+GGG + chr8_3:52079897-52079916 Msa1294280:CDS 25.0%
! GAATACTTTCGAGAATTAAT+AGG - chr8_3:52080078-52080097 None:intergenic 25.0%
!!! ACTTTTAACTTTATTTCACC+GGG - chr8_3:52080164-52080183 None:intergenic 25.0%
! CTAAGGAATATCAAATTGAT+TGG + chr8_3:52080198-52080217 Msa1294280:CDS 25.0%
! TACTCTTAGGATATATGATA+TGG + chr8_3:52080488-52080507 Msa1294280:intron 25.0%
! TATTAGTTAATGAGGTAGTT+AGG + chr8_3:52080554-52080573 Msa1294280:intron 25.0%
! TATAATTCATAAAGGCAACA+GGG - chr8_3:52080772-52080791 None:intergenic 25.0%
! ATATAATTCATAAAGGCAAC+AGG - chr8_3:52080773-52080792 None:intergenic 25.0%
!! TTCTAAGAATGTCGTAATAT+TGG + chr8_3:52081491-52081510 Msa1294280:three_prime_UTR 25.0%
! GAAATTAATATAATACGTGG+TGG - chr8_3:52081575-52081594 None:intergenic 25.0%
! AATAGAGCTGCAATATTATT+AGG - chr8_3:52081637-52081656 None:intergenic 25.0%
AAAAGGGAATATAGCGAAAA+AGG - chr8_3:52077942-52077961 None:intergenic 30.0%
! TGTTGTTGATTGAAGAATTG+GGG + chr8_3:52078168-52078187 Msa1294280:intron 30.0%
! TTGATTTTGCAGTAAAACAG+CGG + chr8_3:52078219-52078238 Msa1294280:intron 30.0%
GTAAACTAACATCAAGAACA+TGG - chr8_3:52078909-52078928 None:intergenic 30.0%
!!! TGATGTGTTGTTTACCTTTT+TGG + chr8_3:52079525-52079544 Msa1294280:intron 30.0%
GCTATTCTGTGAATTAATTG+TGG + chr8_3:52079678-52079697 Msa1294280:CDS 30.0%
TCTCAATTATTGCAAAGCAA+AGG + chr8_3:52079707-52079726 Msa1294280:CDS 30.0%
TTCTTTAGTGATACAAGTTC+TGG - chr8_3:52079878-52079897 None:intergenic 30.0%
CTTCATTATAAGCAAACACA+AGG - chr8_3:52080006-52080025 None:intergenic 30.0%
! AGTATTGAAGGAAATTGCTA+AGG + chr8_3:52080181-52080200 Msa1294280:CDS 30.0%
CAAAATATCAATGGAGAACT+AGG - chr8_3:52080348-52080367 None:intergenic 30.0%
!! CTAGTTCTCCATTGATATTT+TGG + chr8_3:52080346-52080365 Msa1294280:intron 30.0%
GTGAATCAAACAATACTCTT+AGG + chr8_3:52080475-52080494 Msa1294280:intron 30.0%
TCTTAGGATATATGATATGG+TGG + chr8_3:52080491-52080510 Msa1294280:intron 30.0%
AGTTCTTCAGAATTTGAGAA+AGG + chr8_3:52080514-52080533 Msa1294280:intron 30.0%
GTTCTTCAGAATTTGAGAAA+GGG + chr8_3:52080515-52080534 Msa1294280:intron 30.0%
TTCTTCAGAATTTGAGAAAG+GGG + chr8_3:52080516-52080535 Msa1294280:intron 30.0%
TTTCTTAGGAACCCAATAAT+TGG - chr8_3:52080747-52080766 None:intergenic 30.0%
TGTGAATTGATCAGATTATC+AGG + chr8_3:52080817-52080836 Msa1294280:intron 30.0%
CTTAGAATCTTCAAAATGCA+TGG - chr8_3:52080860-52080879 None:intergenic 30.0%
! TGCTGAATTTGCTTCTTATA+TGG + chr8_3:52080927-52080946 Msa1294280:CDS 30.0%
ATCATTGTAATATGGTTGAG+AGG - chr8_3:52080974-52080993 None:intergenic 30.0%
! AAGTTGTGAGTATATTTTGC+AGG - chr8_3:52081012-52081031 None:intergenic 30.0%
TGCAAAATATACTCACAACT+TGG + chr8_3:52081011-52081030 Msa1294280:CDS 30.0%
TCATCATAATCTGGCAATTT+AGG - chr8_3:52081330-52081349 None:intergenic 30.0%
!! AGCTAGAACATTTTGATAAG+TGG - chr8_3:52081415-52081434 None:intergenic 30.0%
! ACAAGAGAAGAGAAGTGTAA+CGG - chr8_3:52077973-52077992 None:intergenic 35.0%
! GTTGTTGATTGAAGAATTGG+GGG + chr8_3:52078169-52078188 Msa1294280:intron 35.0%
! TTGTTGATTGAAGAATTGGG+GGG + chr8_3:52078170-52078189 Msa1294280:intron 35.0%
!!! ATATGGAGTAGTTTTGTGGT+TGG + chr8_3:52078624-52078643 Msa1294280:intron 35.0%
!! AATTTTCAGCACTGAGTTTG+TGG + chr8_3:52078808-52078827 Msa1294280:intron 35.0%
!! GAGAATTTGGTGTGAAATTG+TGG + chr8_3:52079139-52079158 Msa1294280:intron 35.0%
CATCTACTGTAAACATTCAC+AGG + chr8_3:52079452-52079471 Msa1294280:intron 35.0%
ACTGTAAACATTCACAGGAT+TGG + chr8_3:52079457-52079476 Msa1294280:intron 35.0%
ACATTCACAGGATTGGAATT+TGG + chr8_3:52079464-52079483 Msa1294280:intron 35.0%
! GATGAGAGAGCAAAATGTTT+TGG + chr8_3:52079636-52079655 Msa1294280:CDS 35.0%
CTTTGCAATAATTGAGAGTC+TGG - chr8_3:52079704-52079723 None:intergenic 35.0%
ATTCCTTCTTTCAAATCAGC+AGG - chr8_3:52079815-52079834 None:intergenic 35.0%
ACACAAGGAAAAATGCAATC+TGG - chr8_3:52079991-52080010 None:intergenic 35.0%
! TAATGAAGAACGAAGTGTCT+TGG + chr8_3:52080018-52080037 Msa1294280:intron 35.0%
TTAGTTGATTGACAAGCTCT+CGG + chr8_3:52080127-52080146 Msa1294280:intron 35.0%
! TTTAACTTTATTTCACCGGG+AGG - chr8_3:52080161-52080180 None:intergenic 35.0%
! ACTCATACTATTAGCTCTTC+TGG - chr8_3:52080260-52080279 None:intergenic 35.0%
GAGAAGAGCCAAAATATCAA+TGG - chr8_3:52080357-52080376 None:intergenic 35.0%
!! TTTGGCTCTTCTCTATTATC+AGG + chr8_3:52080364-52080383 Msa1294280:intron 35.0%
CTCTTCTCTATTATCAGGAA+GGG + chr8_3:52080369-52080388 Msa1294280:intron 35.0%
TCTTCTCTATTATCAGGAAG+GGG + chr8_3:52080370-52080389 Msa1294280:intron 35.0%
TGTTGAATTCTTCACTGGTA+AGG - chr8_3:52080420-52080439 None:intergenic 35.0%
ACAGTTGTTGAATTCTTCAC+TGG - chr8_3:52080425-52080444 None:intergenic 35.0%
GAATTCAACAACTGTTTCCA+TGG + chr8_3:52080430-52080449 Msa1294280:CDS 35.0%
TCTTCAGAATTTGAGAAAGG+GGG + chr8_3:52080517-52080536 Msa1294280:intron 35.0%
!!! TAGGAAGGTTTTGGAATTAG+AGG + chr8_3:52080592-52080611 Msa1294280:intron 35.0%
!!! AGGAAGGTTTTGGAATTAGA+GGG + chr8_3:52080593-52080612 Msa1294280:intron 35.0%
GAATAGTGACTCTATTGTGA+AGG + chr8_3:52080648-52080667 Msa1294280:intron 35.0%
TATTGTGAAGGAGAAACCTT+TGG + chr8_3:52080660-52080679 Msa1294280:intron 35.0%
ATTGTGAAGGAGAAACCTTT+GGG + chr8_3:52080661-52080680 Msa1294280:intron 35.0%
GAATTGATCAGATTATCAGG+CGG + chr8_3:52080820-52080839 Msa1294280:intron 35.0%
TGCTTCTTATATGGCTATGA+AGG + chr8_3:52080936-52080955 Msa1294280:CDS 35.0%
CTTGGCTCATAAATCAACAA+TGG + chr8_3:52081029-52081048 Msa1294280:CDS 35.0%
AATATCTGAATGTGCAGAAG+CGG - chr8_3:52081175-52081194 None:intergenic 35.0%
TTGATAAGTGGTTGCTCAAA+GGG - chr8_3:52081403-52081422 None:intergenic 35.0%
TTTGATAAGTGGTTGCTCAA+AGG - chr8_3:52081404-52081423 None:intergenic 35.0%
CAATATTGGATGCCATAGTT+TGG + chr8_3:52081535-52081554 Msa1294280:three_prime_UTR 35.0%
GAACAATGTGTACCAAACTA+TGG - chr8_3:52081550-52081569 None:intergenic 35.0%
GGGAATATAGCGAAAAAGGA+GGG - chr8_3:52077938-52077957 None:intergenic 40.0%
AGGGAATATAGCGAAAAAGG+AGG - chr8_3:52077939-52077958 None:intergenic 40.0%
TGTAACGGTGTGCTGAAAAA+GGG - chr8_3:52077958-52077977 None:intergenic 40.0%
AGAAAGAGAGAAATGGGGTT+GGG - chr8_3:52078012-52078031 None:intergenic 40.0%
GAGAGAGAAAGAGAGAAATG+GGG - chr8_3:52078017-52078036 None:intergenic 40.0%
GGAGAGAGAAAGAGAGAAAT+GGG - chr8_3:52078018-52078037 None:intergenic 40.0%
TGGAGAGAGAAAGAGAGAAA+TGG - chr8_3:52078019-52078038 None:intergenic 40.0%
TTAAGCTGTTGAGGAACAAG+AGG + chr8_3:52078263-52078282 Msa1294280:CDS 40.0%
TAAGCTGTTGAGGAACAAGA+GGG + chr8_3:52078264-52078283 Msa1294280:CDS 40.0%
ACACCTTCAACCTGAAATGT+TGG + chr8_3:52078528-52078547 Msa1294280:intron 40.0%
AAATGCAGCACCAACATTTC+AGG - chr8_3:52078541-52078560 None:intergenic 40.0%
!!! TTGGTGCTGCATTTTCATCA+TGG + chr8_3:52078547-52078566 Msa1294280:intron 40.0%
!! GAGCATTTGGTGTGAAATTG+TGG + chr8_3:52079004-52079023 Msa1294280:intron 40.0%
!!! GTTGTTTACCTTTTTGGCTG+TGG + chr8_3:52079531-52079550 Msa1294280:intron 40.0%
TGCTAATCCGAGTCATTTCA+GGG + chr8_3:52079784-52079803 Msa1294280:intron 40.0%
!! TGTCCTGCTGATTTGAAAGA+AGG + chr8_3:52079809-52079828 Msa1294280:CDS 40.0%
! TCTTTGAGAAGAAATACGGG+AGG + chr8_3:52079900-52079919 Msa1294280:CDS 40.0%
! CTTTGAGAAGAAATACGGGA+GGG + chr8_3:52079901-52079920 Msa1294280:CDS 40.0%
! GGATTTTGTATCTGCTGCTA+CGG + chr8_3:52079922-52079941 Msa1294280:CDS 40.0%
! AGAACGAAGTGTCTTGGATT+TGG + chr8_3:52080024-52080043 Msa1294280:intron 40.0%
! CATACTATTAGCTCTTCTGG+AGG - chr8_3:52080257-52080276 None:intergenic 40.0%
GCTCTTCTCTATTATCAGGA+AGG + chr8_3:52080368-52080387 Msa1294280:intron 40.0%
AGTCAAATAAGCCAGCAACA+AGG + chr8_3:52080453-52080472 Msa1294280:CDS 40.0%
TGTTTGATTCACCTTGTTGC+TGG - chr8_3:52080467-52080486 None:intergenic 40.0%
TTGTGAAGGAGAAACCTTTG+GGG + chr8_3:52080662-52080681 Msa1294280:intron 40.0%
! AAGGCAACAGGGTATTTCTT+AGG - chr8_3:52080761-52080780 None:intergenic 40.0%
GGCTCATAAATCAACAATGG+AGG + chr8_3:52081032-52081051 Msa1294280:CDS 40.0%
TTGTTCATGTGATCAGACCT+TGG - chr8_3:52081084-52081103 None:intergenic 40.0%
TAATCCTTTCCACCATACGA+TGG - chr8_3:52081114-52081133 None:intergenic 40.0%
! CAGTTACTTTCCCACCTAAA+CGG + chr8_3:52081244-52081263 Msa1294280:CDS 40.0%
TGTTTAGCCACAGATGAAGA+AGG - chr8_3:52081285-52081304 None:intergenic 40.0%
TTCTTCATCTGTGGCTAAAC+AGG + chr8_3:52081284-52081303 Msa1294280:CDS 40.0%
! TTTAGGATGAACACGGATGT+TGG - chr8_3:52081313-52081332 None:intergenic 40.0%
! CTGGCAATTTAGGATGAACA+CGG - chr8_3:52081320-52081339 None:intergenic 40.0%
GCAGTGAGTTCATCATAATC+TGG - chr8_3:52081339-52081358 None:intergenic 40.0%
GTGTAACGGTGTGCTGAAAA+AGG - chr8_3:52077959-52077978 None:intergenic 45.0%
! AGAAATGGGGTTGGGGTTTT+GGG - chr8_3:52078004-52078023 None:intergenic 45.0%
GAAAGAGAGAAATGGGGTTG+GGG - chr8_3:52078011-52078030 None:intergenic 45.0%
GAGAAAGAGAGAAATGGGGT+TGG - chr8_3:52078013-52078032 None:intergenic 45.0%
TTACAACCGTCATGGGGAAA+CGG - chr8_3:52078042-52078061 None:intergenic 45.0%
TCGGCTTCAATTCCTCCAAA+TGG + chr8_3:52078119-52078138 Msa1294280:CDS 45.0%
ATTGCGATGCTTCTTCAGTC+TGG + chr8_3:52078316-52078335 Msa1294280:CDS 45.0%
AATTACCCTGATACGAGCAG+TGG - chr8_3:52078350-52078369 None:intergenic 45.0%
!! GCACCAACATTTCAGGTTGA+AGG - chr8_3:52078534-52078553 None:intergenic 45.0%
GATCACTTTCCTAGAGTTCG+TGG + chr8_3:52078869-52078888 Msa1294280:intron 45.0%
ACTTTCCTAGAGTTCGTGGA+AGG + chr8_3:52078873-52078892 Msa1294280:intron 45.0%
ATTCACCTTCCACGAACTCT+AGG - chr8_3:52078881-52078900 None:intergenic 45.0%
GACATTAGCCACAGCCAAAA+AGG - chr8_3:52079542-52079561 None:intergenic 45.0%
CTGCTAATCCGAGTCATTTC+AGG + chr8_3:52079783-52079802 Msa1294280:intron 45.0%
GGACATTCCCTGAAATGACT+CGG - chr8_3:52079794-52079813 None:intergenic 45.0%
GCTTAATATTTGCAGCCCCT+AGG + chr8_3:52079840-52079859 Msa1294280:CDS 45.0%
TGGAATTTCTGAGCACCTAG+GGG - chr8_3:52079858-52079877 None:intergenic 45.0%
CTGGAATTTCTGAGCACCTA+GGG - chr8_3:52079859-52079878 None:intergenic 45.0%
! TCTGGAATTTCTGAGCACCT+AGG - chr8_3:52079860-52079879 None:intergenic 45.0%
ATTCTTCACTGGTAAGGTGC+TGG - chr8_3:52080414-52080433 None:intergenic 45.0%
!! TGCTGGCTTATTTGACTCCA+TGG - chr8_3:52080450-52080469 None:intergenic 45.0%
GAGAGAAATCTCTACCCCAA+AGG - chr8_3:52080679-52080698 None:intergenic 45.0%
TTGATCAGATTATCAGGCGG+TGG + chr8_3:52080823-52080842 Msa1294280:intron 45.0%
AGCAGCTAAGAAAGCAATCG+CGG + chr8_3:52080903-52080922 Msa1294280:CDS 45.0%
CAATGGAGGAGAAAATGCAC+AGG + chr8_3:52081046-52081065 Msa1294280:CDS 45.0%
GTCTGATCACATGAACAACG+AGG + chr8_3:52081086-52081105 Msa1294280:CDS 45.0%
AACAACGAGGATCCATCGTA+TGG + chr8_3:52081099-52081118 Msa1294280:CDS 45.0%
TTAGGTGGGAAAGTAACTGG+AGG - chr8_3:52081243-52081262 None:intergenic 45.0%
CGTTTAGGTGGGAAAGTAAC+TGG - chr8_3:52081246-52081265 None:intergenic 45.0%
! ACAGATGAAGAAGGTACAGG+TGG - chr8_3:52081276-52081295 None:intergenic 45.0%
ACCTGTACCTTCTTCATCTG+TGG + chr8_3:52081275-52081294 Msa1294280:CDS 45.0%
! TAGCGAAAAAGGAGGGTGTG+TGG - chr8_3:52077931-52077950 None:intergenic 50.0%
!!! GGTTGGGGTTTTGGGGTTTA+AGG - chr8_3:52077996-52078015 None:intergenic 50.0%
! GAAATGGGGTTGGGGTTTTG+GGG - chr8_3:52078003-52078022 None:intergenic 50.0%
! GAGAAATGGGGTTGGGGTTT+TGG - chr8_3:52078005-52078024 None:intergenic 50.0%
CTGTGGTTACAACCGTCATG+GGG - chr8_3:52078048-52078067 None:intergenic 50.0%
GCTGTGGTTACAACCGTCAT+GGG - chr8_3:52078049-52078068 None:intergenic 50.0%
AAGCTCACTCTCGCTCTTCT+CGG + chr8_3:52078094-52078113 Msa1294280:CDS 50.0%
CAGTAAAACAGCGGCGAAGA+TGG + chr8_3:52078228-52078247 Msa1294280:intron 50.0%
TAAAACAGCGGCGAAGATGG+CGG + chr8_3:52078231-52078250 Msa1294280:CDS 50.0%
TGGCGAGGATTAAGCTGTTG+AGG + chr8_3:52078254-52078273 Msa1294280:CDS 50.0%
AAGATGCCACTGCTCGTATC+AGG + chr8_3:52078341-52078360 Msa1294280:CDS 50.0%
AGATGCCACTGCTCGTATCA+GGG + chr8_3:52078342-52078361 Msa1294280:CDS 50.0%
ACGGATCTTAGACCTAGCTG+TGG + chr8_3:52079941-52079960 Msa1294280:CDS 50.0%
CAATCTGGAGATGACCTACC+TGG - chr8_3:52079976-52079995 None:intergenic 50.0%
ACAGGTCGCATAGCTTACCA+AGG + chr8_3:52081064-52081083 Msa1294280:CDS 50.0%
AACGAGGATCCATCGTATGG+TGG + chr8_3:52081102-52081121 Msa1294280:CDS 50.0%
! GGATCCATCGTATGGTGGAA+AGG + chr8_3:52081107-52081126 Msa1294280:CDS 50.0%
CTGAATGTGCAGAAGCTGGA+TGG - chr8_3:52081152-52081171 None:intergenic 50.0%
! GATGAAGAAGGTACAGGTGG+TGG - chr8_3:52081273-52081292 None:intergenic 50.0%
! GCCACAGATGAAGAAGGTAC+AGG - chr8_3:52081279-52081298 None:intergenic 50.0%
GTGGTTGCTCAAAGGGTTCA+TGG - chr8_3:52081396-52081415 None:intergenic 50.0%
TCTCCACCGTTTCCCCATGA+CGG + chr8_3:52078033-52078052 Msa1294280:exon 55.0%
GGCTGTGGTTACAACCGTCA+TGG - chr8_3:52078050-52078069 None:intergenic 55.0%
ACTCTCGCTCTTCTCGGTCT+CGG + chr8_3:52078100-52078119 Msa1294280:CDS 55.0%
GCTGTTGAGGAACAAGAGGG+AGG + chr8_3:52078267-52078286 Msa1294280:CDS 55.0%
GAGGAACAAGAGGGAGGTTG+TGG + chr8_3:52078273-52078292 Msa1294280:CDS 55.0%
ACAAGAGGGAGGTTGTGGTG+AGG + chr8_3:52078278-52078297 Msa1294280:CDS 55.0%
TGGCGGTTAACACCACAGCT+AGG - chr8_3:52079956-52079975 None:intergenic 55.0%
! TAGCTGTGGTGTTAACCGCC+AGG + chr8_3:52079955-52079974 Msa1294280:CDS 55.0%
! TGTGGTGTTAACCGCCAGGT+AGG + chr8_3:52079959-52079978 Msa1294280:intron 55.0%
TCTGGAGATGACCTACCTGG+CGG - chr8_3:52079973-52079992 None:intergenic 55.0%
! GTGGTGGAAGCCGTTTAGGT+GGG - chr8_3:52081257-52081276 None:intergenic 55.0%
!! ACAGGTGGTGGAAGCCGTTT+AGG - chr8_3:52081261-52081280 None:intergenic 55.0%
CAACCGTCATGGGGAAACGG+TGG - chr8_3:52078039-52078058 None:intergenic 60.0%
CACGATCCTCTTCGTGCGTG+CGG - chr8_3:52078074-52078093 None:intergenic 60.0%
GCGGCTGAATGTGCAGAAGC+TGG - chr8_3:52081156-52081175 None:intergenic 60.0%
!! GGTGGTGGAAGCCGTTTAGG+TGG - chr8_3:52081258-52081277 None:intergenic 60.0%
GATCCTCTTCGTGCGTGCGG+TGG - chr8_3:52078071-52078090 None:intergenic 65.0%
! AACAGCGGCGAAGATGGCGG+TGG + chr8_3:52078234-52078253 Msa1294280:CDS 65.0%
CTCTCGGTACGCACACCTCC+CGG + chr8_3:52080143-52080162 Msa1294280:CDS 65.0%
CTTCGTGCGTGCGGTGGCTG+TGG - chr8_3:52078065-52078084 None:intergenic 70.0%
CAGCCACCGCACGCACGAAG+AGG + chr8_3:52078065-52078084 Msa1294280:CDS 70.0%
! CGGCGAAGATGGCGGTGGCG+AGG + chr8_3:52078239-52078258 Msa1294280:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 52077923 52081670 52077923 ID=Msa1294280;Name=Msa1294280
chr8_3 mRNA 52077923 52081670 52077923 ID=Msa1294280-mRNA-1;Parent=Msa1294280;Name=Msa1294280-mRNA-1;_AED=0.06;_eAED=0.06;_QI=126|1|1|1|1|1|7|272|432
chr8_3 exon 52077923 52078140 52077923 ID=Msa1294280-mRNA-1:exon:14625;Parent=Msa1294280-mRNA-1
chr8_3 exon 52078231 52078363 52078231 ID=Msa1294280-mRNA-1:exon:14626;Parent=Msa1294280-mRNA-1
chr8_3 exon 52079625 52079728 52079625 ID=Msa1294280-mRNA-1:exon:14627;Parent=Msa1294280-mRNA-1
chr8_3 exon 52079805 52079976 52079805 ID=Msa1294280-mRNA-1:exon:14628;Parent=Msa1294280-mRNA-1
chr8_3 exon 52080131 52080271 52080131 ID=Msa1294280-mRNA-1:exon:14629;Parent=Msa1294280-mRNA-1
chr8_3 exon 52080386 52080474 52080386 ID=Msa1294280-mRNA-1:exon:14630;Parent=Msa1294280-mRNA-1
chr8_3 exon 52080831 52081670 52080831 ID=Msa1294280-mRNA-1:exon:14631;Parent=Msa1294280-mRNA-1
chr8_3 five_prime_UTR 52077923 52078048 52077923 ID=Msa1294280-mRNA-1:five_prime_utr;Parent=Msa1294280-mRNA-1
chr8_3 CDS 52078049 52078140 52078049 ID=Msa1294280-mRNA-1:cds;Parent=Msa1294280-mRNA-1
chr8_3 CDS 52078231 52078363 52078231 ID=Msa1294280-mRNA-1:cds;Parent=Msa1294280-mRNA-1
chr8_3 CDS 52079625 52079728 52079625 ID=Msa1294280-mRNA-1:cds;Parent=Msa1294280-mRNA-1
chr8_3 CDS 52079805 52079976 52079805 ID=Msa1294280-mRNA-1:cds;Parent=Msa1294280-mRNA-1
chr8_3 CDS 52080131 52080271 52080131 ID=Msa1294280-mRNA-1:cds;Parent=Msa1294280-mRNA-1
chr8_3 CDS 52080386 52080474 52080386 ID=Msa1294280-mRNA-1:cds;Parent=Msa1294280-mRNA-1
chr8_3 CDS 52080831 52081398 52080831 ID=Msa1294280-mRNA-1:cds;Parent=Msa1294280-mRNA-1
chr8_3 three_prime_UTR 52081399 52081670 52081399 ID=Msa1294280-mRNA-1:three_prime_utr;Parent=Msa1294280-mRNA-1
Gene Sequence

>Msa1294280

ATGACGGTTGTAACCACAGCCACCGCACGCACGAAGAGGATCGTGAAGCTCACTCTCGCTCTTCTCGGTCTCGGCTTCAATTCCTCCAAATGTAAAACAGCGGCGAAGATGGCGGTGGCGAGGATTAAGCTGTTGAGGAACAAGAGGGAGGTTGTGGTGAGGCAGATGAGACGTGACATTGCGATGCTTCTTCAGTCTGGTCAAGATGCCACTGCTCGTATCAGGGTTGAGCATGTGATGAGAGAGCAAAATGTTTTGGCTGCAAATGAATTCATTGAGCTATTCTGTGAATTAATTGTGGCCAGACTCTCAATTATTGCAAAGCAAAGGGAATGTCCTGCTGATTTGAAAGAAGGAATTGCTAGCTTAATATTTGCAGCCCCTAGGTGCTCAGAAATTCCAGAACTTGTATCACTAAAGAAAATCTTTGAGAAGAAATACGGGAGGGATTTTGTATCTGCTGCTACGGATCTTAGACCTAGCTGTGGTGTTAACCGCCAGTTGATTGACAAGCTCTCGGTACGCACACCTCCCGGTGAAATAAAGTTAAAAGTATTGAAGGAAATTGCTAAGGAATATCAAATTGATTGGGATACTGCAGAATCTGAGAAAGAGCTTCTCAAGCCTCCAGAAGAGCTAATAGAAGGGGAGCGCACTTTTGTCAGTGCCAGCACCTTACCAGTGAAGAATTCAACAACTGTTTCCATGGAGTCAAATAAGCCAGCAACAAGATTATCAGGCGGTGGAATAAGTGATTCCATGCATTTTGAAGATTCTAAGTCTGCTGCTGAAGCAGCAACTGAAGCAGCTAAGAAAGCAATCGCGGCTGCTGAATTTGCTTCTTATATGGCTATGAAGGACTCTAATGAAGCCTCTCAACCATATTACAATGATAAGTTCTATAATGATCCTGCAAAATATACTCACAACTTGGCTCATAAATCAACAATGGAGGAGAAAATGCACAGGTCGCATAGCTTACCAAGGTCTGATCACATGAACAACGAGGATCCATCGTATGGTGGAAAGGATTATAGAAGACACAGCTACCATCCAGCTTCTGCACATTCAGCCGCTTCTGCACATTCAGATATTAAGTTTGATGAATCAGATTGTGATGAAGAAATTGAAGCAGAAGAACCTCCAGTTACTTTCCCACCTAAACGGCTTCCACCACCTGTACCTTCTTCATCTGTGGCTAAACAGGATTCCAACATCCGTGTTCATCCTAAATTGCCAGATTATGATGAACTCACTGCTCGTTTTGATGCTCTAAAATTCAAAAAGTCGCAGCCATGA

Protein sequence

>Msa1294280

MTVVTTATARTKRIVKLTLALLGLGFNSSKCKTAAKMAVARIKLLRNKREVVVRQMRRDIAMLLQSGQDATARIRVEHVMREQNVLAANEFIELFCELIVARLSIIAKQRECPADLKEGIASLIFAAPRCSEIPELVSLKKIFEKKYGRDFVSAATDLRPSCGVNRQLIDKLSVRTPPGEIKLKVLKEIAKEYQIDWDTAESEKELLKPPEELIEGERTFVSASTLPVKNSTTVSMESNKPATRLSGGGISDSMHFEDSKSAAEAATEAAKKAIAAAEFASYMAMKDSNEASQPYYNDKFYNDPAKYTHNLAHKSTMEEKMHRSHSLPRSDHMNNEDPSYGGKDYRRHSYHPASAHSAASAHSDIKFDESDCDEEIEAEEPPVTFPPKRLPPPVPSSSVAKQDSNIRVHPKLPDYDELTARFDALKFKKSQP*