AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0771910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771910 MtrunA17_Chr5g0426311 96.516 287 5 2 1 286 1 283 0.0 545
Msa0771910 MtrunA17_Chr3g0144311 59.487 195 74 4 7 201 20 209 3.45e-60 192
Msa0771910 MtrunA17_Chr4g0017401 63.636 121 38 2 9 127 9 125 2.30e-47 159
Msa0771910 MtrunA17_Chr8g0346011 77.273 88 20 0 7 94 28 115 1.10e-45 155
Msa0771910 MtrunA17_Chr7g0276531 73.333 90 24 0 8 97 10 99 1.18e-44 152
Msa0771910 MtrunA17_Chr3g0127751 69.565 92 27 1 8 99 18 108 1.99e-41 143
Msa0771910 MtrunA17_Chr2g0290191 40.367 109 49 3 17 110 5 112 1.72e-21 94.0
Msa0771910 MtrunA17_Chr2g0290191 29.530 149 95 2 17 159 107 251 1.38e-13 70.5
Msa0771910 MtrunA17_Chr4g0045921 48.193 83 43 0 12 94 72 154 2.38e-18 84.0
Msa0771910 MtrunA17_Chr8g0360551 44.578 83 46 0 12 94 69 151 3.32e-18 84.0
Msa0771910 MtrunA17_Chr8g0360551 31.967 122 75 2 12 125 161 282 6.06e-13 68.6
Msa0771910 MtrunA17_Chr3g0101061 38.750 80 48 1 5 84 29 107 7.04e-18 83.6
Msa0771910 MtrunA17_Chr7g0255011 41.667 84 49 0 11 94 122 205 5.36e-17 80.9
Msa0771910 MtrunA17_Chr1g0186351 38.750 80 48 1 12 91 2 80 4.40e-16 77.8
Msa0771910 MtrunA17_Chr4g0035051 44.595 74 40 1 17 89 9 82 9.86e-16 72.0
Msa0771910 MtrunA17_Chr5g0440831 39.759 83 50 0 12 94 161 243 1.10e-15 77.0
Msa0771910 MtrunA17_Chr2g0278661 41.892 74 42 1 12 84 3 76 8.37e-15 72.4
Msa0771910 MtrunA17_Chr5g0447761 40.000 75 44 1 17 91 7 80 2.59e-14 72.8
Msa0771910 MtrunA17_Chr4g0035031 43.421 76 42 1 17 91 9 84 2.85e-14 69.7
Msa0771910 MtrunA17_Chr3g0121631 40.580 69 41 0 16 84 36 104 1.83e-13 66.6
Msa0771910 MtrunA17_Chr4g0035001 41.892 74 42 1 17 89 7 80 2.19e-13 66.6
Msa0771910 MtrunA17_Chr4g0061451 40.964 83 47 2 16 97 42 123 3.24e-13 68.2
Msa0771910 MtrunA17_Chr4g0031091 42.254 71 40 1 16 85 33 103 7.45e-13 63.9
Msa0771910 MtrunA17_Chr4g0050781 42.029 69 39 1 17 84 8 76 9.77e-13 65.9
Msa0771910 MtrunA17_Chr3g0119311 37.037 81 41 2 16 96 36 106 1.07e-12 63.9
Msa0771910 MtrunA17_Chr3g0086861 40.449 89 51 2 10 97 38 125 1.18e-12 67.8
Msa0771910 MtrunA17_Chr1g0210241 34.940 83 50 1 16 98 7 85 1.38e-12 66.6
Msa0771910 MtrunA17_Chr7g0266751 34.831 89 54 1 17 105 33 117 2.75e-12 63.2
Msa0771910 MtrunA17_Chr3g0135111 32.800 125 73 3 12 129 6 126 4.88e-12 65.5
Msa0771910 MtrunA17_Chr7g0219031 42.424 66 37 1 17 81 41 106 4.03e-11 59.3
Msa0771910 MtrunA17_Chr3g0120721 34.722 72 46 1 17 88 19 89 6.63e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771910 AT1G22330.1 65.217 207 51 7 5 203 6 199 3.18e-64 203
Msa0771910 AT1G78260.1 54.023 261 76 11 5 235 6 252 2.05e-57 186
Msa0771910 AT1G78260.2 56.654 263 66 11 5 235 6 252 4.87e-57 184
Msa0771910 AT1G76460.1 48.879 223 102 5 5 217 12 232 1.30e-54 179
Msa0771910 AT1G20880.2 43.098 297 116 13 5 282 12 274 2.94e-51 170
Msa0771910 AT1G20880.3 43.098 297 116 13 5 282 12 274 2.94e-51 170
Msa0771910 AT1G20880.1 43.098 297 116 13 5 282 12 274 2.94e-51 170
Msa0771910 AT1G33470.3 51.899 158 70 4 12 167 3 156 3.67e-46 155
Msa0771910 AT1G33470.1 51.899 158 70 4 12 167 3 156 3.89e-46 155
Msa0771910 AT2G46780.1 49.223 193 85 6 12 192 18 209 3.66e-45 155
Msa0771910 AT2G46780.2 49.223 193 85 6 12 192 18 209 3.66e-45 155
Msa0771910 AT1G33470.2 52.632 152 66 4 12 161 3 150 1.05e-44 152
Msa0771910 AT1G22910.2 69.388 98 28 1 10 105 7 104 1.86e-43 149
Msa0771910 AT1G22910.1 69.388 98 28 1 10 105 7 104 5.29e-43 147
Msa0771910 AT1G22910.3 67.308 104 27 2 10 111 7 105 8.77e-43 150
Msa0771910 AT3G54770.1 66.304 92 30 1 10 100 11 102 1.31e-37 134
Msa0771910 AT3G54770.3 66.304 92 30 1 10 100 11 102 1.67e-37 134
Msa0771910 AT5G11412.1 58.889 90 37 0 5 94 41 130 1.10e-34 124
Msa0771910 AT5G53680.1 49.000 100 47 2 5 101 3 101 1.54e-29 110
Msa0771910 AT5G53720.1 54.430 79 36 0 16 94 9 87 1.15e-25 98.2
Msa0771910 AT3G06970.1 47.423 97 50 1 12 107 8 104 1.44e-25 103
Msa0771910 AT3G54770.2 66.176 68 22 1 32 98 1 68 7.90e-25 99.4
Msa0771910 AT5G47620.1 47.826 69 35 1 16 84 6 73 2.29e-18 85.1
Msa0771910 AT5G47620.2 47.826 69 35 1 16 84 6 73 2.29e-18 85.1
Msa0771910 AT5G47620.5 47.826 69 35 1 16 84 6 73 2.29e-18 85.1
Msa0771910 AT5G47620.4 47.826 69 35 1 16 84 6 73 2.35e-18 85.1
Msa0771910 AT2G22090.2 43.373 83 47 0 12 94 100 182 1.41e-17 82.0
Msa0771910 AT2G22090.1 43.373 83 47 0 12 94 100 182 1.44e-17 82.0
Msa0771910 AT4G26650.1 41.667 72 41 1 13 84 12 82 2.86e-17 81.6
Msa0771910 AT4G26650.2 41.667 72 41 1 13 84 9 79 2.86e-17 81.6
Msa0771910 AT3G15010.1 45.783 83 45 0 12 94 71 153 3.16e-17 81.6
Msa0771910 AT3G15010.1 36.364 88 56 0 8 95 159 246 1.32e-15 76.6
Msa0771910 AT3G15010.2 45.783 83 45 0 12 94 71 153 3.16e-17 81.6
Msa0771910 AT3G15010.2 36.364 88 56 0 8 95 159 246 1.32e-15 76.6
Msa0771910 AT4G39260.3 40.625 96 45 3 17 111 7 91 4.75e-17 75.1
Msa0771910 AT5G55550.5 41.096 73 42 1 12 84 2 73 5.13e-17 80.9
Msa0771910 AT5G55550.4 41.096 73 42 1 12 84 2 73 5.13e-17 80.9
Msa0771910 AT5G55550.9 41.096 73 42 1 12 84 2 73 5.13e-17 80.9
Msa0771910 AT5G55550.7 41.096 73 42 1 12 84 2 73 5.13e-17 80.9
Msa0771910 AT5G55550.1 41.096 73 42 1 12 84 2 73 5.13e-17 80.9
Msa0771910 AT5G55550.2 41.096 73 42 1 12 84 2 73 5.89e-17 80.9
Msa0771910 AT5G55550.3 41.096 73 42 1 12 84 2 73 5.89e-17 80.9
Msa0771910 AT5G55550.6 41.096 73 42 1 12 84 2 73 5.89e-17 80.9
Msa0771910 AT5G55550.11 41.096 73 42 1 12 84 2 73 5.89e-17 80.9
Msa0771910 AT5G55550.8 41.096 73 42 1 12 84 2 73 6.25e-17 80.9
Msa0771910 AT5G55550.10 41.096 73 42 1 12 84 2 73 6.75e-17 80.9
Msa0771910 AT4G39260.2 43.421 76 42 1 17 91 7 82 7.45e-17 75.5
Msa0771910 AT4G39260.1 43.421 76 42 1 17 91 7 82 2.05e-16 75.5
Msa0771910 AT4G13850.3 40.909 88 48 2 16 102 35 119 3.25e-16 74.3
Msa0771910 AT2G41060.1 39.759 83 50 0 12 94 124 206 3.85e-16 78.6
Msa0771910 AT2G41060.3 39.759 83 50 0 12 94 124 206 3.85e-16 78.6
Msa0771910 AT2G41060.2 39.759 83 50 0 12 94 124 206 3.85e-16 78.6
Msa0771910 AT4G13850.2 40.909 88 48 2 16 102 35 119 4.01e-16 74.3
Msa0771910 AT4G13850.1 40.909 88 48 2 16 102 35 119 4.49e-16 74.3
Msa0771910 AT3G23830.2 38.636 88 50 2 16 102 35 119 5.78e-16 73.6
Msa0771910 AT3G23830.1 38.636 88 50 2 16 102 35 119 5.78e-16 73.6
Msa0771910 AT4G39260.4 45.161 62 34 0 17 78 7 68 6.76e-16 72.4
Msa0771910 AT3G07810.1 40.000 75 44 1 17 91 7 80 2.75e-15 76.3
Msa0771910 AT3G07810.2 40.000 75 44 1 17 91 7 80 2.81e-15 75.9
Msa0771910 AT2G21660.2 42.683 82 45 2 11 91 4 84 5.04e-15 71.6
Msa0771910 AT2G21660.1 42.683 82 45 2 11 91 4 84 7.21e-15 71.6
Msa0771910 AT4G13850.4 41.667 72 38 1 16 87 35 102 8.40e-15 70.1
Msa0771910 AT3G56860.9 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.11 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.8 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.5 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.7 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.2 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.6 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.10 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.3 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.1 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT3G56860.4 39.759 83 50 0 12 94 136 218 9.36e-15 74.3
Msa0771910 AT2G33410.1 35.870 92 57 2 17 108 7 96 2.01e-14 73.2
Msa0771910 AT2G19380.1 39.506 81 49 0 12 92 404 484 2.43e-14 73.6
Msa0771910 AT4G14300.1 37.500 80 49 1 12 91 2 80 4.57e-14 72.4
Msa0771910 AT4G14300.2 37.500 80 49 1 12 91 2 80 4.57e-14 72.4
Msa0771910 AT1G17640.2 41.667 72 41 1 17 88 67 137 7.83e-14 71.2
Msa0771910 AT1G17640.1 41.667 72 41 1 17 88 67 137 7.83e-14 71.2
Msa0771910 AT1G17640.3 41.667 72 41 1 17 88 67 137 7.83e-14 71.2
Msa0771910 AT2G22100.1 34.940 83 54 0 6 88 153 235 1.74e-13 70.5
Msa0771910 AT3G26420.1 40.580 69 40 1 17 84 8 76 3.47e-12 65.5
Msa0771910 AT1G74230.1 37.662 77 48 0 16 92 34 110 1.09e-11 64.3
Msa0771910 AT5G04280.1 35.294 102 60 2 16 115 7 104 1.15e-11 64.7
Msa0771910 AT5G61030.2 33.333 78 48 1 16 93 40 113 1.35e-11 64.3
Msa0771910 AT5G61030.1 33.333 78 48 1 16 93 40 113 1.35e-11 64.3
Msa0771910 AT1G18630.1 41.429 70 40 1 16 84 36 105 1.69e-11 61.6
Msa0771910 AT1G22910.4 65.217 46 14 1 62 105 8 53 2.95e-11 62.0
Msa0771910 AT5G59865.1 48.980 49 25 0 16 64 26 74 3.17e-11 59.7

Find 123 sgRNAs with CRISPR-Local

Find 695 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTATGGCATTCCAAATT+TGG 0.131556 5_2:-45585417 Msa0771910:three_prime_UTR
TTGATTAATCAGTCCAAATT+TGG 0.158048 5_2:+45585404 None:intergenic
CAATACTATCAACAACTTTA+TGG 0.198535 5_2:-45594261 Msa0771910:CDS
CCACATTATCGATCACAATT+TGG 0.217645 5_2:-45597812 Msa0771910:CDS
CTTCCATCAATTACTGGGTT+TGG 0.238742 5_2:+45597489 None:intergenic
ATTTAGTGATTCTCTCCTAT+TGG 0.255682 5_2:-45598079 Msa0771910:five_prime_UTR
GGAGAAGGTTGCCTTATTAA+TGG 0.270286 5_2:+45594054 None:intergenic
GCTCTTCTTCCATCAATTAC+TGG 0.273226 5_2:+45597483 None:intergenic
ATGGGTTCACCATATTATTA+TGG 0.277771 5_2:-45594222 Msa0771910:CDS
ACTTGAGGGTACCCGTATTC+AGG 0.296691 5_2:+45594448 None:intergenic
TTTAGTGATTCTCTCCTATT+GGG 0.315114 5_2:-45598078 Msa0771910:five_prime_UTR
CAAGCCCTTCTAGCTGATTC+TGG 0.316155 5_2:+45597519 None:intergenic
CACTTCAACAACCATTAATA+AGG 0.322262 5_2:-45594065 Msa0771910:CDS
AGCTTGTATGCGATGTGGTT+GGG 0.337761 5_2:+45594155 None:intergenic
GGACTGATTAATCAACTTCA+TGG 0.352176 5_2:-45585396 Msa0771910:three_prime_UTR
GCTCCTTCCATTGGTGTAGT+AGG 0.368922 5_2:+45594111 None:intergenic
AAAAGAGAGAGAGGTGGGTA+TGG 0.374440 5_2:+45598110 None:intergenic
CTCTTCTTCCATCAATTACT+GGG 0.374932 5_2:+45597484 None:intergenic
TACGCCGCTGCTGCTCCTCC+TGG 0.388874 5_2:+45596839 None:intergenic
ATTGAATTTGAAGATTATAC+AGG 0.389867 5_2:+45585521 None:intergenic
GATGATGTGGTATGGTTGTT+TGG 0.392913 5_2:+45598147 None:intergenic
ATAGAATAGCCATAATAATA+TGG 0.394438 5_2:+45594213 None:intergenic
ATGACTTGTGTTCTTCACTA+TGG 0.398359 5_2:-45585431 Msa0771910:three_prime_UTR
CCTCTTGGTGGCGATGGTCT+AGG 0.401232 5_2:+45597432 None:intergenic
CCCACCTACACTCCTGAATA+CGG 0.401412 5_2:-45594460 Msa0771910:CDS
GTGATCCAGAATCAGCTAGA+AGG 0.404501 5_2:-45597524 Msa0771910:CDS
CCAGTGATGTACCAACCATA+TGG 0.406669 5_2:-45596761 Msa0771910:CDS
GGCAGGAGGGCCACCACAAA+TGG 0.409472 5_2:-45596804 Msa0771910:CDS
TGTAGTAGGGTAGTATAGAT+AGG 0.410340 5_2:+45594125 None:intergenic
AATTGTAACATTGCTTCTCT+TGG 0.414331 5_2:-45597459 Msa0771910:CDS
AAGAGAAAAGAGAGAGAGGT+GGG 0.426595 5_2:+45598105 None:intergenic
GTTGCTCCTCCTGCCATTTG+TGG 0.434650 5_2:+45596791 None:intergenic
AGCGGCGTACGGCGGTGTTC+CGG 0.436874 5_2:-45596825 Msa0771910:CDS
GATTATACAGGTTGAAACTA+AGG 0.440593 5_2:+45585533 None:intergenic
GATCCAAACCCAGTAATTGA+TGG 0.443686 5_2:-45597492 Msa0771910:CDS
CTCCTTCCATTGGTGTAGTA+GGG 0.454529 5_2:+45594112 None:intergenic
TGGACCATCATCTTCAACAA+TGG 0.459048 5_2:-45594241 Msa0771910:CDS
GAGAGAGAAGAGAGTAGTGG+AGG 0.459127 5_2:+45598249 None:intergenic
ACCTCATCAGAGACAGCATC+TGG 0.463906 5_2:-45585626 Msa0771910:CDS
TGGAGACACAACATTTACTA+AGG 0.466200 5_2:-45597792 Msa0771910:CDS
ATTATCACTGATAAGAATAC+AGG 0.469048 5_2:-45597683 Msa0771910:CDS
TAATTACCTCTTGGTGGCGA+TGG 0.475539 5_2:+45597426 None:intergenic
GGAGGGCCACCACAAATGGC+AGG 0.475742 5_2:-45596800 Msa0771910:CDS
GGAGGAGCAGCAGCGGCGTA+CGG 0.476509 5_2:-45596836 Msa0771910:CDS
GGACCATCATCTTCAACAAT+GGG 0.476751 5_2:-45594240 Msa0771910:CDS
GGTGTGGGGACAGGAGCACC+AGG 0.477832 5_2:-45596857 Msa0771910:CDS
AGCACCAGGAGGAGCAGCAG+CGG 0.478510 5_2:-45596843 Msa0771910:CDS
GTTAATAATATTTGATGCAA+TGG 0.484841 5_2:-45597840 Msa0771910:exon
TGAAATTAATTACCTCTTGG+TGG 0.485462 5_2:+45597420 None:intergenic
TGCATCAAGTGTACTACTCT+TGG 0.489966 5_2:+45597911 None:intergenic
ATTTGTGGTGGCCCTCCTGC+CGG 0.491579 5_2:+45596806 None:intergenic
CAGCTTGTATGCGATGTGGT+TGG 0.492117 5_2:+45594154 None:intergenic
TATGTCCTCATTTCATCAGT+TGG 0.492209 5_2:+45597740 None:intergenic
GAGAAAGTTGCTCCTTCCAT+TGG 0.493319 5_2:+45594102 None:intergenic
AGAGAGAAGAGAGTAGTGGA+GGG 0.503987 5_2:+45598250 None:intergenic
ACATAGCGAACTTACCCATA+TGG 0.504687 5_2:+45596746 None:intergenic
TACGGCGGTGTTCCGGCAGG+AGG 0.505951 5_2:-45596818 Msa0771910:CDS
TATTGTGCTTGCTGAATCTG+TGG 0.514006 5_2:+45594279 None:intergenic
AAGAATACAGGAAAATCTAA+AGG 0.522577 5_2:-45597671 Msa0771910:CDS
GCTCCTCCTGCCATTTGTGG+TGG 0.523998 5_2:+45596794 None:intergenic
GCAGGGAGGGGTACATATCA+AGG 0.525507 5_2:-45596884 Msa0771910:intron
GCGTACGGCGGTGTTCCGGC+AGG 0.531532 5_2:-45596821 Msa0771910:CDS
AGGGGTACATATCAAGGTGG+GGG 0.532228 5_2:-45596878 Msa0771910:CDS
GTTGAAAATGTACCCCTTGG+TGG 0.534222 5_2:+45594180 None:intergenic
ACAGGAAAATCTAAAGGATA+CGG 0.534361 5_2:-45597665 Msa0771910:CDS
GCTTGTATGCGATGTGGTTG+GGG 0.534607 5_2:+45594156 None:intergenic
CCATATGGTTGGTACATCAC+TGG 0.536103 5_2:+45596761 None:intergenic
TAAGAGAAAAGAGAGAGAGG+TGG 0.536604 5_2:+45598104 None:intergenic
CAACCACATCGCATACAAGC+TGG 0.537393 5_2:-45594153 Msa0771910:CDS
CAGTGATGTACCAACCATAT+GGG 0.538558 5_2:-45596760 Msa0771910:intron
AAGAGGTGTTGTTGAATGGT+GGG 0.539075 5_2:-45598046 Msa0771910:five_prime_UTR
CCCGTATTCAGGAGTGTAGG+TGG 0.540062 5_2:+45594459 None:intergenic
ATTATACAGGTTGAAACTAA+GGG 0.541207 5_2:+45585534 None:intergenic
ATAGAGAGAGAAGAGAGTAG+TGG 0.544647 5_2:+45598246 None:intergenic
CTTATTAATGGTTGTTGAAG+TGG 0.545928 5_2:+45594066 None:intergenic
AAAGATTACCACTAGGAGAA+GGG 0.546590 5_2:+45594028 None:intergenic
GAGGGGTACATATCAAGGTG+GGG 0.550871 5_2:-45596879 Msa0771910:CDS
CCAAATTGTGATCGATAATG+TGG 0.553655 5_2:+45597812 None:intergenic
GAAAGATTACCACTAGGAGA+AGG 0.553884 5_2:+45594027 None:intergenic
GGGAGGGGTACATATCAAGG+TGG 0.557161 5_2:-45596881 Msa0771910:CDS
CTAGGAGAAGGGGTAGGAGA+AGG 0.561216 5_2:+45594039 None:intergenic
TCGGAAAGTTCAAATACTCA+AGG 0.561904 5_2:-45585590 Msa0771910:CDS
AAGAAAGAGGTGTTGTTGAA+TGG 0.570970 5_2:-45598050 Msa0771910:five_prime_UTR
ATCTGGAGTAGTTATAACTT+CGG 0.572225 5_2:-45585609 Msa0771910:CDS
GGAGGGGTACATATCAAGGT+GGG 0.575240 5_2:-45596880 Msa0771910:CDS
ATTGTGCTTGCTGAATCTGT+GGG 0.576111 5_2:+45594280 None:intergenic
CCACCTACACTCCTGAATAC+GGG 0.576471 5_2:-45594459 Msa0771910:CDS
TGATCCAGAATCAGCTAGAA+GGG 0.577679 5_2:-45597523 Msa0771910:CDS
AAAGAGGTGTTGTTGAATGG+TGG 0.578458 5_2:-45598047 Msa0771910:five_prime_UTR
GGAGCAGCAGCGGCGTACGG+CGG 0.578552 5_2:-45596833 Msa0771910:CDS
ATACTACCCTACTACACCAA+TGG 0.581425 5_2:-45594118 Msa0771910:CDS
GTAGGGTAGTATAGATAGGA+TGG 0.589808 5_2:+45594129 None:intergenic
CCGTATTCAGGAGTGTAGGT+GGG 0.589906 5_2:+45594460 None:intergenic
AGCGAACTTACCCATATGGT+TGG 0.591541 5_2:+45596750 None:intergenic
TCTCCTACCCCTTCTCCTAG+TGG 0.593229 5_2:-45594036 Msa0771910:intron
AAGATTACCACTAGGAGAAG+GGG 0.593298 5_2:+45594029 None:intergenic
AGAGGTGTTGTTGAATGGTG+GGG 0.600498 5_2:-45598045 Msa0771910:five_prime_UTR
GAGAGAAGAGAGTAGTGGAG+GGG 0.601059 5_2:+45598251 None:intergenic
TATGCAAGCAGCACCACCAA+GGG 0.604039 5_2:-45594193 Msa0771910:CDS
GGTGTTGAAAATGTACCCCT+TGG 0.604699 5_2:+45594177 None:intergenic
AAACTCCAACTGATGAAATG+AGG 0.611186 5_2:-45597745 Msa0771910:CDS
GAACCCATTGTTGAAGATGA+TGG 0.613054 5_2:+45594237 None:intergenic
CGGAAAGTTCAAATACTCAA+GGG 0.613076 5_2:-45585589 Msa0771910:CDS
GGGCCACCACAAATGGCAGG+AGG 0.622370 5_2:-45596797 Msa0771910:CDS
CGTATTCAGGAGTGTAGGTG+GGG 0.623905 5_2:+45594461 None:intergenic
AATATGATGATGATGTGGTA+TGG 0.625083 5_2:+45598139 None:intergenic
ACGGCGGTGTTCCGGCAGGA+GGG 0.631360 5_2:-45596817 Msa0771910:CDS
TCCAGATGCTGTCTCTGATG+AGG 0.638137 5_2:+45585625 None:intergenic
TACCCTACTACACCAATGGA+AGG 0.640780 5_2:-45594114 Msa0771910:CDS
TTATACAGGTTGAAACTAAG+GGG 0.641425 5_2:+45585535 None:intergenic
CCTAGACCATCGCCACCAAG+AGG 0.650766 5_2:-45597432 Msa0771910:intron
GTACCCGTATTCAGGAGTGT+AGG 0.661197 5_2:+45594456 None:intergenic
CTATGCAAGCAGCACCACCA+AGG 0.664787 5_2:-45594194 Msa0771910:CDS
AGTGAAGAACACAAGTCATG+TGG 0.666369 5_2:+45585435 None:intergenic
TACAGGTTGAAACTAAGGGG+GGG 0.672454 5_2:+45585538 None:intergenic
TTATGAATATGATGATGATG+TGG 0.674344 5_2:+45598134 None:intergenic
GTGGGGACAGGAGCACCAGG+AGG 0.675679 5_2:-45596854 Msa0771910:CDS
CTATTGGGAAAAGAAGAAAG+AGG 0.683433 5_2:-45598063 Msa0771910:five_prime_UTR
TTACCACTAGGAGAAGGGGT+AGG 0.689545 5_2:+45594033 None:intergenic
TATACAGGTTGAAACTAAGG+GGG 0.689755 5_2:+45585536 None:intergenic
GGTCCAGCTTGTATGCGATG+TGG 0.710376 5_2:+45594150 None:intergenic
ATACAGGTTGAAACTAAGGG+GGG 0.721574 5_2:+45585537 None:intergenic
ATGCAAGCAGCACCACCAAG+GGG 0.723319 5_2:-45594192 Msa0771910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAACAAAAAATATTTAAAA+GGG + chr5_2:45585407-45585426 None:intergenic 10.0%
!! ACAAACAAAAAATATTTAAA+AGG + chr5_2:45585408-45585427 None:intergenic 10.0%
!!! TAAATATTTCTTAAATTTTG+TGG - chr5_2:45587344-45587363 Msa0771910:intron 10.0%
!!! AAGTTATACATAAATTTTAT+AGG - chr5_2:45587496-45587515 Msa0771910:intron 10.0%
!! AAAGAAGAAAATATTAAAAA+TGG - chr5_2:45587522-45587541 Msa0771910:intron 10.0%
!!! ATGAAAAATGTTTTTTTTTA+AGG + chr5_2:45588147-45588166 None:intergenic 10.0%
!! ACTAAATATATAGAATTTAT+TGG - chr5_2:45588333-45588352 Msa0771910:intron 10.0%
!!! CATATATTTTTTTTAGTATT+AGG - chr5_2:45589251-45589270 Msa0771910:intron 10.0%
!! ATTAAATTAATATAAAGAAG+AGG + chr5_2:45589601-45589620 None:intergenic 10.0%
!! TTAATGTAGTAAATTAAATT+TGG - chr5_2:45590537-45590556 Msa0771910:intron 10.0%
!! TAATGTAGTAAATTAAATTT+GGG - chr5_2:45590538-45590557 Msa0771910:intron 10.0%
!!! TTAAAAAGTCTTTTTTTTTT+TGG + chr5_2:45591944-45591963 None:intergenic 10.0%
!! AGTAAAAAATAGTATTTATA+AGG - chr5_2:45593511-45593530 Msa0771910:intron 10.0%
!! ATATTTCTTATATTTAATCA+AGG - chr5_2:45593642-45593661 Msa0771910:intron 10.0%
!! AATATAATTAAAATCTACAT+TGG + chr5_2:45594515-45594534 None:intergenic 10.0%
!! AACAATAGTATTAAAATAAA+TGG + chr5_2:45597868-45597887 None:intergenic 10.0%
!!! ATTATATCTTCAATTTTTTT+CGG - chr5_2:45598140-45598159 Msa0771910:five_prime_UTR 10.0%
!! TTATAATGATGATTATGATA+AGG + chr5_2:45585998-45586017 None:intergenic 15.0%
!! TTCATAAATAAAAACATTAG+TGG + chr5_2:45586219-45586238 None:intergenic 15.0%
!! TTAATATCACCATAAAAATT+AGG - chr5_2:45586412-45586431 Msa0771910:intron 15.0%
!! CAAATTAATAACATTTAGTA+GGG + chr5_2:45586641-45586660 None:intergenic 15.0%
!! ACAAATTAATAACATTTAGT+AGG + chr5_2:45586642-45586661 None:intergenic 15.0%
!!! TGAAATGATAAAGTATATTT+TGG - chr5_2:45586673-45586692 Msa0771910:intron 15.0%
!!! GATTAATATATTTAGAGTAA+GGG + chr5_2:45587159-45587178 None:intergenic 15.0%
!!! TGATTAATATATTTAGAGTA+AGG + chr5_2:45587160-45587179 None:intergenic 15.0%
!!! TTTCATTATTTTTTAGAGTA+AGG + chr5_2:45587197-45587216 None:intergenic 15.0%
!! AGAAAATATTAAAAATGGAA+AGG - chr5_2:45587527-45587546 Msa0771910:intron 15.0%
!! GAAAATATTAAAAATGGAAA+GGG - chr5_2:45587528-45587547 Msa0771910:intron 15.0%
!! AAAATATTAAAAATGGAAAG+GGG - chr5_2:45587529-45587548 Msa0771910:intron 15.0%
!!! AAAAAATGATGATGATAAAT+AGG - chr5_2:45587641-45587660 Msa0771910:intron 15.0%
!! TTACTAAACTAACTTATATT+AGG + chr5_2:45588497-45588516 None:intergenic 15.0%
!!! TAATATAAGTTAGTTTAGTA+AGG - chr5_2:45588496-45588515 Msa0771910:intron 15.0%
!! ATTAAATTACAAAGCAAAAA+AGG + chr5_2:45589094-45589113 None:intergenic 15.0%
!! GTAAATTTGAAAAGATTAAA+GGG + chr5_2:45589631-45589650 None:intergenic 15.0%
!! AGTAAATTTGAAAAGATTAA+AGG + chr5_2:45589632-45589651 None:intergenic 15.0%
!! AATCAATATTTCTTATACAT+GGG + chr5_2:45591038-45591057 None:intergenic 15.0%
!! AAATCAATATTTCTTATACA+TGG + chr5_2:45591039-45591058 None:intergenic 15.0%
!!! AATAATATCTTTTAATCAGT+TGG + chr5_2:45591765-45591784 None:intergenic 15.0%
!! TATTCCTTACTTAATTTATT+AGG + chr5_2:45592124-45592143 None:intergenic 15.0%
!! ATAAAAAAGGAAGAAAAAAT+TGG - chr5_2:45592752-45592771 Msa0771910:intron 15.0%
!! CAAATGTAAATATTTATCTA+AGG - chr5_2:45593558-45593577 Msa0771910:intron 15.0%
!!! TAATACATATTGATAACAAT+TGG - chr5_2:45593765-45593784 Msa0771910:intron 15.0%
!!! ATTTTTTTTTTGTTCTTTGT+TGG + chr5_2:45594297-45594316 None:intergenic 15.0%
!!! TTTTGTTATCAATAAGAAAA+TGG + chr5_2:45594643-45594662 None:intergenic 15.0%
!!! TTATTGATAACAAAATATGT+AGG - chr5_2:45594648-45594667 Msa0771910:intron 15.0%
!! AATAAATCTGAAAATTTATG+TGG - chr5_2:45594873-45594892 Msa0771910:intron 15.0%
!! AATCAAATAAAGACTTAAAA+AGG - chr5_2:45595427-45595446 Msa0771910:intron 15.0%
!! ATAGTTAATTATTGAATTTC+TGG + chr5_2:45595709-45595728 None:intergenic 15.0%
!!! TTTAGAAATTCAAATTTTGA+TGG - chr5_2:45596397-45596416 Msa0771910:intron 15.0%
!! TTAAAATTGTGAAAAAAATG+TGG - chr5_2:45596442-45596461 Msa0771910:intron 15.0%
!! CATCTTAATAATATACAAAT+GGG + chr5_2:45596590-45596609 None:intergenic 15.0%
!! ACATCTTAATAATATACAAA+TGG + chr5_2:45596591-45596610 None:intergenic 15.0%
!! AAACATATAAATGTTACAAA+TGG + chr5_2:45596810-45596829 None:intergenic 15.0%
!! ATACAAATTCATTGTATAAA+AGG + chr5_2:45597050-45597069 None:intergenic 15.0%
!!! TTTTTTTTTTTACGTAAACA+TGG + chr5_2:45597542-45597561 None:intergenic 15.0%
!!! AATATTAAATAGGTTGAAAT+TGG + chr5_2:45597796-45597815 None:intergenic 15.0%
!!! TAATTATTGTTTCTTATGAT+TGG - chr5_2:45597921-45597940 Msa0771910:five_prime_UTR 15.0%
!! GTTAATAATATTTGATGCAA+TGG - chr5_2:45585759-45585778 Msa0771910:intron 20.0%
!!! GAATTTCAATTTTTTTGGTT+TGG + chr5_2:45586561-45586580 None:intergenic 20.0%
!!! GAGATGAATTTCAATTTTTT+TGG + chr5_2:45586566-45586585 None:intergenic 20.0%
!!! AATGATAAAGTATATTTTGG+TGG - chr5_2:45586676-45586695 Msa0771910:intron 20.0%
!!! ATGATAAAGTATATTTTGGT+GGG - chr5_2:45586677-45586696 Msa0771910:intron 20.0%
!! ATAATAATGTGTGTATTTCT+TGG - chr5_2:45587315-45587334 Msa0771910:intron 20.0%
!! TAGTAATGTGACTTTAATAA+TGG + chr5_2:45587438-45587457 None:intergenic 20.0%
!! AAATATTAAAAATGGAAAGG+GGG - chr5_2:45587530-45587549 Msa0771910:intron 20.0%
!! AAATATCAAAAACTAGAGAA+AGG - chr5_2:45587590-45587609 Msa0771910:intron 20.0%
!! ACAATGTTAGATAATAAATG+TGG + chr5_2:45588061-45588080 None:intergenic 20.0%
!!! ATTTTATACCTCTTTAATGT+AGG + chr5_2:45588248-45588267 None:intergenic 20.0%
!! ACTTCGAAAATAGATTATAA+AGG - chr5_2:45588455-45588474 Msa0771910:intron 20.0%
!! CTTCGAAAATAGATTATAAA+GGG - chr5_2:45588456-45588475 Msa0771910:intron 20.0%
!! GTATTATGTATTGCTTATAT+TGG + chr5_2:45588533-45588552 None:intergenic 20.0%
!! ATAAAGTGCATTAAAAAGAA+TGG + chr5_2:45588689-45588708 None:intergenic 20.0%
!! TCATAATCAATTCAATCTTA+GGG - chr5_2:45588796-45588815 Msa0771910:intron 20.0%
!! ATTTCACATTGATCAATTTA+AGG - chr5_2:45588890-45588909 Msa0771910:intron 20.0%
!!! AATTTCTTATCAATAGCTTT+TGG + chr5_2:45588930-45588949 None:intergenic 20.0%
!! GTATGATCTTAAATGATTAT+GGG + chr5_2:45589189-45589208 None:intergenic 20.0%
!! TGTATGATCTTAAATGATTA+TGG + chr5_2:45589190-45589209 None:intergenic 20.0%
!! AATTTGTAATTTATGAGTAC+AGG - chr5_2:45589283-45589302 Msa0771910:intron 20.0%
!! ATAGAATAGCCATAATAATA+TGG + chr5_2:45589389-45589408 None:intergenic 20.0%
!! TGATTAAAATACAACATTGT+AGG + chr5_2:45590688-45590707 None:intergenic 20.0%
!!! TTTTCATATTCTTCAAACAT+GGG + chr5_2:45590935-45590954 None:intergenic 20.0%
!!! ATTTTCATATTCTTCAAACA+TGG + chr5_2:45590936-45590955 None:intergenic 20.0%
!! AAATTTATATTCCCTAAACA+TGG + chr5_2:45590988-45591007 None:intergenic 20.0%
!! ATCAATATTTCTTATACATG+GGG + chr5_2:45591037-45591056 None:intergenic 20.0%
!!! AAGAAATATTGATTTGTTTG+AGG - chr5_2:45591044-45591063 Msa0771910:intron 20.0%
!!! TTGAATTTGAGTTTTAATTG+TGG - chr5_2:45591229-45591248 Msa0771910:intron 20.0%
!!! TGAATTTGAGTTTTAATTGT+GGG - chr5_2:45591230-45591249 Msa0771910:intron 20.0%
!!! ATTAATGGACTAACAAAATA+GGG - chr5_2:45591320-45591339 Msa0771910:intron 20.0%
!! AAAATATGCAAAATACTACA+CGG + chr5_2:45591416-45591435 None:intergenic 20.0%
!! TTATGAAAACAAAATTAGAG+TGG + chr5_2:45591722-45591741 None:intergenic 20.0%
!! TAGAAATAAAAGTGACATAA+TGG + chr5_2:45592006-45592025 None:intergenic 20.0%
!! TTATACGTCATATTAAATGT+TGG + chr5_2:45592058-45592077 None:intergenic 20.0%
!! TCTTTCATTTGTAAGAAAAA+CGG - chr5_2:45592318-45592337 Msa0771910:intron 20.0%
!! CCAAAATTATAGAATGTAAT+TGG + chr5_2:45592449-45592468 None:intergenic 20.0%
!!! CCAATTACATTCTATAATTT+TGG - chr5_2:45592446-45592465 Msa0771910:intron 20.0%
!! GTGAATAATAGAATATTGTA+TGG + chr5_2:45592482-45592501 None:intergenic 20.0%
!! TCTAAATTCAAAATTGTACA+TGG + chr5_2:45592612-45592631 None:intergenic 20.0%
!!! TCTTTTTTATTATCTCTCTT+TGG + chr5_2:45592636-45592655 None:intergenic 20.0%
!!! ACAAAAGATACTTCATTTTT+AGG - chr5_2:45592673-45592692 Msa0771910:intron 20.0%
!! CATTAATTTAAACATTGTGT+AGG - chr5_2:45592782-45592801 Msa0771910:intron 20.0%
!!! ATAAGAAAACTTTGGTTTAA+TGG + chr5_2:45593047-45593066 None:intergenic 20.0%
!!! TTAAACCAAAGTTTTCTTAT+TGG - chr5_2:45593047-45593066 Msa0771910:intron 20.0%
!! TTTAATCAAGGCAAAAAAAT+AGG - chr5_2:45593654-45593673 Msa0771910:intron 20.0%
!! TACATATATTCACTTCAAAT+AGG - chr5_2:45593689-45593708 Msa0771910:intron 20.0%
!! ACTAAAAAATTCACTGAAAA+GGG - chr5_2:45593881-45593900 Msa0771910:intron 20.0%
!! AAAAGATAAAAATTGAAGCA+TGG - chr5_2:45593906-45593925 Msa0771910:intron 20.0%
!! TGGATTATGAAATAAGTTAA+AGG - chr5_2:45593926-45593945 Msa0771910:intron 20.0%
!!! AATCAATTGTTATCTAAAGT+TGG + chr5_2:45593970-45593989 None:intergenic 20.0%
!! AAGACAACAATTCATAAATT+AGG + chr5_2:45594066-45594085 None:intergenic 20.0%
!! CAATACTTCAATCAAATATA+TGG + chr5_2:45594154-45594173 None:intergenic 20.0%
!! TTTATATCACTTTCAATTCA+AGG + chr5_2:45594435-45594454 None:intergenic 20.0%
!!! AAGTGATATAAATTTGTTAG+AGG - chr5_2:45594443-45594462 Msa0771910:intron 20.0%
!! ATTTCATTTGCTTATATGAA+AGG + chr5_2:45594555-45594574 None:intergenic 20.0%
!! AAAACACAAACAAAATATGT+AGG - chr5_2:45594593-45594612 Msa0771910:intron 20.0%
!!! ATGATATTGTTAGTTTTACA+TGG + chr5_2:45594620-45594639 None:intergenic 20.0%
!! TACAAATCAGAAAATGAAAA+TGG - chr5_2:45594765-45594784 Msa0771910:intron 20.0%
!! ATAATAAAGGAAAAACCAAA+AGG - chr5_2:45595040-45595059 Msa0771910:intron 20.0%
!! ATGAATATTTGAATAGAGAA+GGG - chr5_2:45595149-45595168 Msa0771910:intron 20.0%
!!! ATTTTTTCAGTTAGTTAACT+TGG + chr5_2:45595180-45595199 None:intergenic 20.0%
!!! TCTTTTGAAGAAACAATTAT+GGG + chr5_2:45595391-45595410 None:intergenic 20.0%
!!! ATCTTTTGAAGAAACAATTA+TGG + chr5_2:45595392-45595411 None:intergenic 20.0%
!! TTTGTTAATCATACATTTAC+AGG + chr5_2:45595611-45595630 None:intergenic 20.0%
!! AAAAAAACAGAAATTATGAG+AGG - chr5_2:45595802-45595821 Msa0771910:intron 20.0%
!! GTTTGAATTTGAATTTGAAT+TGG - chr5_2:45596122-45596141 Msa0771910:intron 20.0%
!!! TTTGTTTGTTTCTCAAAATT+AGG - chr5_2:45596346-45596365 Msa0771910:intron 20.0%
!! TATCATCAAATTTAGTAAGT+TGG + chr5_2:45596486-45596505 None:intergenic 20.0%
!!! TTATGAGATAATTTTTCACA+TGG - chr5_2:45596688-45596707 Msa0771910:intron 20.0%
!!! TATGAGATAATTTTTCACAT+GGG - chr5_2:45596689-45596708 Msa0771910:intron 20.0%
!! TCATAGAAACTTATTATTCA+AGG - chr5_2:45596966-45596985 Msa0771910:intron 20.0%
!!! AGCATTTTCAATTTTGTTAT+TGG - chr5_2:45597019-45597038 Msa0771910:intron 20.0%
!!! TTTATTTGTGAAGAAGATTT+TGG - chr5_2:45597164-45597183 Msa0771910:intron 20.0%
!! ATAGTAGTTAAGAAAAGAAA+AGG + chr5_2:45597259-45597278 None:intergenic 20.0%
!!! AACTACAAATTTTGATGTTT+TGG - chr5_2:45597389-45597408 Msa0771910:intron 20.0%
!!! ACTACAAATTTTGATGTTTT+GGG - chr5_2:45597390-45597409 Msa0771910:intron 20.0%
!!! TTGTTTATCTTTGAGTTTAA+AGG + chr5_2:45597509-45597528 None:intergenic 20.0%
!! TCAAATAAACCAATTTAAAC+AGG - chr5_2:45597763-45597782 Msa0771910:CDS 20.0%
!! ATTGAATTTGAAGATTATAC+AGG + chr5_2:45598081-45598100 None:intergenic 20.0%
!! TTATGAATATGATGATGATG+TGG + chr5_2:45585468-45585487 None:intergenic 25.0%
!! ACATTTACTAAGGTTTTTGT+TGG - chr5_2:45585817-45585836 Msa0771910:intron 25.0%
!!! AGGACATATTTTGAACAATT+TGG - chr5_2:45585874-45585893 Msa0771910:intron 25.0%
! ATTATCACTGATAAGAATAC+AGG - chr5_2:45585916-45585935 Msa0771910:intron 25.0%
! AAGAATACAGGAAAATCTAA+AGG - chr5_2:45585928-45585947 Msa0771910:intron 25.0%
! TAAACATTGAATTAATGTGC+AGG - chr5_2:45586043-45586062 Msa0771910:intron 25.0%
! CAATGAAATTAATTACCTCT+TGG + chr5_2:45586185-45586204 None:intergenic 25.0%
! ATATCACCATAAAAATTAGG+TGG - chr5_2:45586415-45586434 Msa0771910:intron 25.0%
! AATTTACCCATGTTATGTTA+TGG - chr5_2:45586903-45586922 Msa0771910:intron 25.0%
! CAGTTATCTAATTAATACCA+TGG + chr5_2:45586959-45586978 None:intergenic 25.0%
! ATGATATGAAATGATATGTG+AGG + chr5_2:45587068-45587087 None:intergenic 25.0%
! CATGATGATTTAAAAGAGTA+AGG + chr5_2:45587130-45587149 None:intergenic 25.0%
!! TTTAGAGTAAGGTTACATAA+GGG + chr5_2:45587186-45587205 None:intergenic 25.0%
!!! TTTTAGAGTAAGGTTACATA+AGG + chr5_2:45587187-45587206 None:intergenic 25.0%
!!! ATGATGATGTGTTTGTTTTA+GGG - chr5_2:45587287-45587306 Msa0771910:intron 25.0%
!!! AATTTTGTGGAATTTGAGTT+TGG - chr5_2:45587357-45587376 Msa0771910:intron 25.0%
! AATATTAAAAATGGAAAGGG+GGG - chr5_2:45587531-45587550 Msa0771910:intron 25.0%
! TCAATAAAAAATGTAGTCCA+CGG - chr5_2:45587698-45587717 Msa0771910:intron 25.0%
! TCAAATTAACCTACCTATAT+AGG + chr5_2:45587741-45587760 None:intergenic 25.0%
!!! AACATTTTCTGGTTTTTCAT+AGG + chr5_2:45588110-45588129 None:intergenic 25.0%
! TGATCAAAAGAGAAATTTCA+CGG - chr5_2:45588174-45588193 Msa0771910:intron 25.0%
! ACATATATATGAAGTCTCAT+GGG + chr5_2:45588628-45588647 None:intergenic 25.0%
! GTCATAATCAATTCAATCTT+AGG - chr5_2:45588795-45588814 Msa0771910:intron 25.0%
!!! CAATTTCTTGTTTTGTAGTA+TGG + chr5_2:45588841-45588860 None:intergenic 25.0%
!!! TATAGTGAAGTTAATTTGTG+AGG + chr5_2:45588982-45589001 None:intergenic 25.0%
! CAATACTATCAACAACTTTA+TGG - chr5_2:45589338-45589357 Msa0771910:intron 25.0%
! AATTTGAAAAGATTAAAGGG+TGG + chr5_2:45589628-45589647 None:intergenic 25.0%
!! AGTGTCAATTCAACTTTTTA+TGG + chr5_2:45589655-45589674 None:intergenic 25.0%
!!! GTTTTTTAGTTATAAGTCAG+TGG + chr5_2:45589905-45589924 None:intergenic 25.0%
! ACTTATAACTAAAAAACCGA+CGG - chr5_2:45589908-45589927 Msa0771910:intron 25.0%
!!! TTAACTACCGTAGAATTTTT+TGG - chr5_2:45589934-45589953 Msa0771910:intron 25.0%
! GAAATGACCAAAAAATTCTA+CGG + chr5_2:45589944-45589963 None:intergenic 25.0%
!!! TATGATTTTGCTATAACATG+TGG - chr5_2:45590202-45590221 Msa0771910:intron 25.0%
! TTAACCGTATTATGTATGTA+TGG - chr5_2:45590285-45590304 Msa0771910:intron 25.0%
! TAACCGTATTATGTATGTAT+GGG - chr5_2:45590286-45590305 Msa0771910:intron 25.0%
! AAAATGAGAAAATGCAAAGT+GGG + chr5_2:45590435-45590454 None:intergenic 25.0%
! TAAAATGAGAAAATGCAAAG+TGG + chr5_2:45590436-45590455 None:intergenic 25.0%
! ATGAAATGAATTTGTAGGTT+GGG + chr5_2:45590466-45590485 None:intergenic 25.0%
! AGTACATGAAATGAATTTGT+AGG + chr5_2:45590471-45590490 None:intergenic 25.0%
!!! AATTGTTTTGAGATTCATTG+TGG + chr5_2:45590719-45590738 None:intergenic 25.0%
! TTTCATATTCTTCAAACATG+GGG + chr5_2:45590934-45590953 None:intergenic 25.0%
! TCAATATTTCTTATACATGG+GGG + chr5_2:45591036-45591055 None:intergenic 25.0%
!!! GATTAATGGACTAACAAAAT+AGG - chr5_2:45591319-45591338 Msa0771910:intron 25.0%
! AAATATGCAAAATACTACAC+GGG + chr5_2:45591415-45591434 None:intergenic 25.0%
! GAAGAGACTTATATATTTAC+AGG - chr5_2:45591471-45591490 Msa0771910:intron 25.0%
! TAGTCAATTATACAGTTCTA+AGG - chr5_2:45591505-45591524 Msa0771910:intron 25.0%
! AAATATGTCTCCAAAGAATA+CGG + chr5_2:45591551-45591570 None:intergenic 25.0%
!! TTTGAAACTATCCAAACAAA+TGG - chr5_2:45591570-45591589 Msa0771910:intron 25.0%
! TTGAAACTATCCAAACAAAT+GGG - chr5_2:45591571-45591590 Msa0771910:intron 25.0%
!!! TTTTTGTTTACCCATTTGTT+TGG + chr5_2:45591584-45591603 None:intergenic 25.0%
!!! CATAATGGATTATGATTTGT+GGG + chr5_2:45591991-45592010 None:intergenic 25.0%
!!! ACATAATGGATTATGATTTG+TGG + chr5_2:45591992-45592011 None:intergenic 25.0%
! CACTCCTAATAAATTAAGTA+AGG - chr5_2:45592117-45592136 Msa0771910:intron 25.0%
! GATGTTAGTGATTACATAAA+AGG + chr5_2:45592229-45592248 None:intergenic 25.0%
! AAGATACTTCATCTTGAAAA+TGG + chr5_2:45592253-45592272 None:intergenic 25.0%
! TAATTGGTGAGAAATGAAAA+AGG + chr5_2:45592433-45592452 None:intergenic 25.0%
! ACAAAAAGTTCAACTGATAA+AGG - chr5_2:45592535-45592554 Msa0771910:intron 25.0%
! GTGTATTCTATGATTTGATA+AGG - chr5_2:45592557-45592576 Msa0771910:intron 25.0%
! TCTTATTGTTGAATGGTTAT+GGG + chr5_2:45592898-45592917 None:intergenic 25.0%
! TTCTTATTGTTGAATGGTTA+TGG + chr5_2:45592899-45592918 None:intergenic 25.0%
! TCACTATTCTTATTGTTGAA+TGG + chr5_2:45592905-45592924 None:intergenic 25.0%
!! GTAAGAAATATTTTACGACA+TGG + chr5_2:45593297-45593316 None:intergenic 25.0%
!! TCACTTGCTTGAAATATTTT+AGG + chr5_2:45593319-45593338 None:intergenic 25.0%
! CAAAAGACTAATGTAAAAAG+CGG - chr5_2:45593412-45593431 Msa0771910:intron 25.0%
! AAAAGACTAATGTAAAAAGC+GGG - chr5_2:45593413-45593432 Msa0771910:intron 25.0%
! CATAAAATGACTACTATTTG+TGG - chr5_2:45593723-45593742 Msa0771910:intron 25.0%
! CACTAAAAAATTCACTGAAA+AGG - chr5_2:45593880-45593899 Msa0771910:intron 25.0%
!!! GATTGATTTGTTAGTTTGAT+TGG + chr5_2:45594194-45594213 None:intergenic 25.0%
!!! TGGGTTTTAATAGAGAAAAA+AGG - chr5_2:45594480-45594499 Msa0771910:intron 25.0%
! AAAATCTACATTGGATTTCA+TGG + chr5_2:45594506-45594525 None:intergenic 25.0%
! CATATAAGCAAATGAAATCT+TGG - chr5_2:45594557-45594576 Msa0771910:intron 25.0%
!!! AGTTTTCACTTTTAGTCATT+TGG + chr5_2:45594970-45594989 None:intergenic 25.0%
! CTCTATTCAAATATTCATGT+TGG + chr5_2:45595147-45595166 None:intergenic 25.0%
! CATGAATATTTGAATAGAGA+AGG - chr5_2:45595148-45595167 Msa0771910:intron 25.0%
! TGAATATTTGAATAGAGAAG+GGG - chr5_2:45595150-45595169 Msa0771910:intron 25.0%
! AATATGAATCGAAACTTTGA+TGG + chr5_2:45595252-45595271 None:intergenic 25.0%
! ATATTGAGCATATCTATGTT+TGG - chr5_2:45595267-45595286 Msa0771910:intron 25.0%
!! ATTTTTGTGTTCTGATTTTC+TGG + chr5_2:45595350-45595369 None:intergenic 25.0%
! TAAAGACTTAAAAAGGATGT+TGG - chr5_2:45595434-45595453 Msa0771910:intron 25.0%
!!! TTTTTTTAGTTGCATGTGTA+GGG + chr5_2:45595505-45595524 None:intergenic 25.0%
! GCAGAATAAAAATAAGTTCA+AGG + chr5_2:45595551-45595570 None:intergenic 25.0%
!!! AATGTTTTGGTACAAAACAA+TGG + chr5_2:45595646-45595665 None:intergenic 25.0%
!!! AATTTCTGGATTCTTTTTCA+GGG + chr5_2:45595695-45595714 None:intergenic 25.0%
! ATTCATCTATTCATAACTAC+TGG - chr5_2:45595753-45595772 Msa0771910:intron 25.0%
!! TTTTCTTCTTCTTCAGATTT+AGG - chr5_2:45595971-45595990 Msa0771910:intron 25.0%
! TTTCTTCTTCTTCAGATTTA+GGG - chr5_2:45595972-45595991 Msa0771910:intron 25.0%
!! ATTCATGTTGTTGATTGAAA+AGG - chr5_2:45595998-45596017 Msa0771910:intron 25.0%
!!! TGAATTTTTTTTCCACAAAG+AGG - chr5_2:45596179-45596198 Msa0771910:intron 25.0%
! ATAGTGCATAATTAGAGTAT+TGG - chr5_2:45596288-45596307 Msa0771910:intron 25.0%
!! TAGTGCATAATTAGAGTATT+GGG - chr5_2:45596289-45596308 Msa0771910:intron 25.0%
!!! AAACAAAACCCATTTTGAAA+TGG + chr5_2:45596333-45596352 None:intergenic 25.0%
!!! ATTTTCTCTTTGACTTCATT+AGG - chr5_2:45596654-45596673 Msa0771910:intron 25.0%
!!! TTTTCTCTTTGACTTCATTA+GGG - chr5_2:45596655-45596674 Msa0771910:intron 25.0%
! AAAAAATGTTCTTAAGACAC+TGG + chr5_2:45596871-45596890 None:intergenic 25.0%
!! TTTTACGAAAATGCAAATTC+TGG - chr5_2:45597192-45597211 Msa0771910:intron 25.0%
! TAACTACTATTATCATGTGA+AGG - chr5_2:45597269-45597288 Msa0771910:intron 25.0%
!!! CTACAAATTTTGATGTTTTG+GGG - chr5_2:45597391-45597410 Msa0771910:intron 25.0%
! ACAACTTATAGACATATCAT+CGG - chr5_2:45597690-45597709 Msa0771910:CDS 25.0%
! ATTTATATAAGCTCTCAATC+AGG - chr5_2:45597715-45597734 Msa0771910:CDS 25.0%
! AAATATGTCAAACAAAGAAG+AGG + chr5_2:45597900-45597919 None:intergenic 25.0%
!! ATTATACAGGTTGAAACTAA+GGG + chr5_2:45598068-45598087 None:intergenic 25.0%
! TTGATTAATCAGTCCAAATT+TGG + chr5_2:45598198-45598217 None:intergenic 25.0%
! AATATGATGATGATGTGGTA+TGG + chr5_2:45585463-45585482 None:intergenic 30.0%
!! TTTTAAGAGAAAAGAGAGAG+AGG + chr5_2:45585501-45585520 None:intergenic 30.0%
ATTTAGTGATTCTCTCCTAT+TGG - chr5_2:45585520-45585539 Msa0771910:three_prime_UTR 30.0%
TTTAGTGATTCTCTCCTATT+GGG - chr5_2:45585521-45585540 Msa0771910:three_prime_UTR 30.0%
! TCTTTTGCTTCTTCTTCTTT+TGG + chr5_2:45585624-45585643 None:intergenic 30.0%
! TTTACTAAGGTTTTTGTTGG+AGG - chr5_2:45585820-45585839 Msa0771910:intron 30.0%
ACAGGAAAATCTAAAGGATA+CGG - chr5_2:45585934-45585953 Msa0771910:intron 30.0%
AATTGTAACATTGCTTCTCT+TGG - chr5_2:45586140-45586159 Msa0771910:intron 30.0%
TGAAATTAATTACCTCTTGG+TGG + chr5_2:45586182-45586201 None:intergenic 30.0%
TCAAATAGATCGATTGTTGT+GGG + chr5_2:45586278-45586297 None:intergenic 30.0%
! TGATGACCACCTAATTTTTA+TGG + chr5_2:45586424-45586443 None:intergenic 30.0%
! AATTAGGTGGTCATCATTTT+AGG - chr5_2:45586428-45586447 Msa0771910:intron 30.0%
TATGTGGTCATTTATTACTG+TGG - chr5_2:45586871-45586890 Msa0771910:intron 30.0%
GAGTTACCATAACATAACAT+GGG + chr5_2:45586912-45586931 None:intergenic 30.0%
TGAGTTACCATAACATAACA+TGG + chr5_2:45586913-45586932 None:intergenic 30.0%
TTAGAGTAAGGTTACATAAG+GGG + chr5_2:45587185-45587204 None:intergenic 30.0%
GCAACTTCTTATAGTACATA+TGG + chr5_2:45587258-45587277 None:intergenic 30.0%
!! CATGATGATGTGTTTGTTTT+AGG - chr5_2:45587286-45587305 Msa0771910:intron 30.0%
!! GATTCATAAGCTTGTTTTCA+GGG + chr5_2:45587393-45587412 None:intergenic 30.0%
!! TGATTCATAAGCTTGTTTTC+AGG + chr5_2:45587394-45587413 None:intergenic 30.0%
AGTCACATTACTATCTAATG+TGG - chr5_2:45587445-45587464 Msa0771910:intron 30.0%
GTCACATTACTATCTAATGT+GGG - chr5_2:45587446-45587465 Msa0771910:intron 30.0%
AAAAACTAGAGAAAGGTCTA+AGG - chr5_2:45587597-45587616 Msa0771910:intron 30.0%
AATAGTAGATATGTAGTCCA+TGG - chr5_2:45587670-45587689 Msa0771910:intron 30.0%
!!! ATTTTTTATTGACCATGCCA+TGG + chr5_2:45587690-45587709 None:intergenic 30.0%
!! ATACAAAAGTACCAAGAGAT+GGG + chr5_2:45587794-45587813 None:intergenic 30.0%
TAAGACAACAATAACATTGC+TGG + chr5_2:45587844-45587863 None:intergenic 30.0%
TGAGAACTGTATAAATTGCA+TGG - chr5_2:45587864-45587883 Msa0771910:intron 30.0%
TAGGTTAGACTTTCATAATG+TGG - chr5_2:45588001-45588020 Msa0771910:intron 30.0%
TTTCATAATGTGGTGAATCT+AGG - chr5_2:45588011-45588030 Msa0771910:intron 30.0%
TATCTAACATTGTGACGAAT+AGG - chr5_2:45588068-45588087 Msa0771910:intron 30.0%
! AAGACAGTGAAAACATTTTC+TGG + chr5_2:45588121-45588140 None:intergenic 30.0%
ATACAAGTCCTACATTAAAG+AGG - chr5_2:45588237-45588256 Msa0771910:intron 30.0%
GACTTAACGTGTAAATGATT+TGG + chr5_2:45588372-45588391 None:intergenic 30.0%
! TTTTTCTAATAGACCTCTCA+GGG + chr5_2:45588407-45588426 None:intergenic 30.0%
!!! TTTTTTCTAATAGACCTCTC+AGG + chr5_2:45588408-45588427 None:intergenic 30.0%
AAGTTCATCTCTTTCTGATT+TGG + chr5_2:45588439-45588458 None:intergenic 30.0%
CACATATATATGAAGTCTCA+TGG + chr5_2:45588629-45588648 None:intergenic 30.0%
GAGATGACATTATAATGGTA+TGG + chr5_2:45588664-45588683 None:intergenic 30.0%
TAAACCCATCAAGTAGAAAA+TGG + chr5_2:45588717-45588736 None:intergenic 30.0%
ATGCCTTAGTTACATGAAAA+AGG - chr5_2:45588754-45588773 Msa0771910:intron 30.0%
! ATGCTTCTAATTTTTCTCAC+CGG - chr5_2:45588951-45588970 Msa0771910:intron 30.0%
AGAGAAGCAACAACTTAAAA+TGG + chr5_2:45589032-45589051 None:intergenic 30.0%
GTTGAATGCAGTAATGTATT+TGG + chr5_2:45589061-45589080 None:intergenic 30.0%
GATCTTAAATGATTATGGGA+GGG + chr5_2:45589185-45589204 None:intergenic 30.0%
TGATCTTAAATGATTATGGG+AGG + chr5_2:45589186-45589205 None:intergenic 30.0%
ATGGGTTCACCATATTATTA+TGG - chr5_2:45589377-45589396 Msa0771910:intron 30.0%
CTTATTAATGGTTGTTGAAG+TGG + chr5_2:45589536-45589555 None:intergenic 30.0%
CACTTCAACAACCATTAATA+AGG - chr5_2:45589534-45589553 Msa0771910:intron 30.0%
GTCAAATGTTAGATATACCA+AGG + chr5_2:45589687-45589706 None:intergenic 30.0%
! TGCTAAGTCTATGTGTTATT+AGG + chr5_2:45589871-45589890 None:intergenic 30.0%
AAGATGTTCATGATAACACA+TGG + chr5_2:45589966-45589985 None:intergenic 30.0%
TAGTGTATAACGTACAATGT+AGG - chr5_2:45590061-45590080 Msa0771910:intron 30.0%
ATGAATAGAGAGAATTAGAG+TGG - chr5_2:45590103-45590122 Msa0771910:intron 30.0%
TGAATAGAGAGAATTAGAGT+GGG - chr5_2:45590104-45590123 Msa0771910:intron 30.0%
TGACCCATACATACATAATA+CGG + chr5_2:45590292-45590311 None:intergenic 30.0%
! CTTTAAAGATCCAGTCAAAA+TGG - chr5_2:45590388-45590407 Msa0771910:intron 30.0%
CATGAAATGAATTTGTAGGT+TGG + chr5_2:45590467-45590486 None:intergenic 30.0%
ACATAGGCTAAAAGTTAAGA+TGG + chr5_2:45590665-45590684 None:intergenic 30.0%
AATACAACATTGTAGGACAT+AGG + chr5_2:45590681-45590700 None:intergenic 30.0%
TTATATTCCCTAAACATGGA+GGG + chr5_2:45590984-45591003 None:intergenic 30.0%
TTTATATTCCCTAAACATGG+AGG + chr5_2:45590985-45591004 None:intergenic 30.0%
GTTTACAACTACTATCTTGT+TGG - chr5_2:45591297-45591316 Msa0771910:intron 30.0%
CTACTATCTTGTTGGATTAA+TGG - chr5_2:45591305-45591324 Msa0771910:intron 30.0%
CTTGTATCTTATTGATAGAG+TGG - chr5_2:45591347-45591366 Msa0771910:intron 30.0%
ACTGAAAATACACTATTCAG+AGG - chr5_2:45591373-45591392 Msa0771910:intron 30.0%
AATATGTCTCCAAAGAATAC+GGG + chr5_2:45591550-45591569 None:intergenic 30.0%
GCAAATGTTTACTCAAATTG+AGG - chr5_2:45591696-45591715 Msa0771910:intron 30.0%
AACTTAGCACCTTTCAAAAA+AGG - chr5_2:45591906-45591925 Msa0771910:intron 30.0%
! ATACTGAGTTATGTCTTTTC+TGG + chr5_2:45592364-45592383 None:intergenic 30.0%
TGAGAAATGAAAAAGGATGA+TGG + chr5_2:45592426-45592445 None:intergenic 30.0%
!! TGAACTTTTTGTTTGCAATG+TGG + chr5_2:45592527-45592546 None:intergenic 30.0%
AGACAGAGGAAAGATAAAAA+AGG - chr5_2:45592739-45592758 Msa0771910:intron 30.0%
! TTCTTTGGTAACAAAATGCA+TGG + chr5_2:45592867-45592886 None:intergenic 30.0%
!! TTATGGGTATCGAATTTCTT+TGG + chr5_2:45592882-45592901 None:intergenic 30.0%
TAGTGATACTAATTACCCTA+AGG - chr5_2:45592919-45592938 Msa0771910:intron 30.0%
ATTATCAGCCTACTAATGTA+AGG + chr5_2:45592950-45592969 None:intergenic 30.0%
! ACCAAAGTTTTCTTATTGGT+TGG - chr5_2:45593051-45593070 Msa0771910:intron 30.0%
ACCAACCAATAAGAAAACTT+TGG + chr5_2:45593055-45593074 None:intergenic 30.0%
! TAGCTTTCTGAAAAGAAATG+TGG - chr5_2:45593198-45593217 Msa0771910:intron 30.0%
! AAGAGTACATATTCAGCAAA+CGG - chr5_2:45593356-45593375 Msa0771910:intron 30.0%
AAAGACTAATGTAAAAAGCG+GGG - chr5_2:45593414-45593433 Msa0771910:intron 30.0%
CAATCACAAATATTGTGTTC+AGG - chr5_2:45594209-45594228 Msa0771910:CDS 30.0%
!! TTTGTTCTTTGTTGGTTTCT+TGG + chr5_2:45594289-45594308 None:intergenic 30.0%
AATTTACCTACGAAACTGTT+CGG - chr5_2:45594356-45594375 Msa0771910:intron 30.0%
! ATCTTTTGGATATTGAAGGT+TGG + chr5_2:45594403-45594422 None:intergenic 30.0%
! CTCTATCTTTTGGATATTGA+AGG + chr5_2:45594407-45594426 None:intergenic 30.0%
ATATCACTTTCAATTCAAGG+TGG + chr5_2:45594432-45594451 None:intergenic 30.0%
TCTATTAAAACCCAGAATAG+TGG + chr5_2:45594474-45594493 None:intergenic 30.0%
! GAAAGGAATTTTATCTTGAG+AGG + chr5_2:45594538-45594557 None:intergenic 30.0%
!!! TGTTTGTGTTTTGTTTGTTG+AGG + chr5_2:45594585-45594604 None:intergenic 30.0%
ACGTGCAATCATAAATTACA+TGG + chr5_2:45594675-45594694 None:intergenic 30.0%
TAATTTATGATTGCACGTGA+AGG - chr5_2:45594677-45594696 Msa0771910:intron 30.0%
CAATTCAATGAGTATACCTT+TGG - chr5_2:45595220-45595239 Msa0771910:intron 30.0%
!! TCACACACTTTTTAGATTGA+AGG - chr5_2:45595298-45595317 Msa0771910:intron 30.0%
!!! CTTTTTTTAGTTGCATGTGT+AGG + chr5_2:45595506-45595525 None:intergenic 30.0%
CTACACATGCAACTAAAAAA+AGG - chr5_2:45595504-45595523 Msa0771910:intron 30.0%
!! GAATTTCTGGATTCTTTTTC+AGG + chr5_2:45595696-45595715 None:intergenic 30.0%
GGTGATTATGAAACTGAAAT+GGG - chr5_2:45595946-45595965 Msa0771910:intron 30.0%
ATAAATGCATGAAGCAGAAA+GGG + chr5_2:45596247-45596266 None:intergenic 30.0%
!! GCTTTTAAGAAGTGATGATT+TGG - chr5_2:45596512-45596531 Msa0771910:intron 30.0%
AGCTTAAGAATTTGACACAT+TGG - chr5_2:45596542-45596561 Msa0771910:intron 30.0%
AAGAATTTGACACATTGGAT+TGG - chr5_2:45596547-45596566 Msa0771910:intron 30.0%
! ACAAATGGTGTTAAGAGATT+CGG + chr5_2:45596795-45596814 None:intergenic 30.0%
AATGCTAATAAGTTGTCCTA+GGG + chr5_2:45597005-45597024 None:intergenic 30.0%
AAATGCTAATAAGTTGTCCT+AGG + chr5_2:45597006-45597025 None:intergenic 30.0%
AGAACTAGATTAACCTCTAA+TGG - chr5_2:45597085-45597104 Msa0771910:intron 30.0%
TAATAGAGTGTGAGATGATA+TGG + chr5_2:45597363-45597382 None:intergenic 30.0%
TGCAATTTGGATGTCTTAAT+TGG + chr5_2:45597428-45597447 None:intergenic 30.0%
! ATCTGGAGTAGTTATAACTT+CGG - chr5_2:45597990-45598009 Msa0771910:intron 30.0%
! TTATACAGGTTGAAACTAAG+GGG + chr5_2:45598067-45598086 None:intergenic 30.0%
! GATTATACAGGTTGAAACTA+AGG + chr5_2:45598069-45598088 None:intergenic 30.0%
! CTCTTTCTTCTTTTCCCAAT+AGG + chr5_2:45585538-45585557 None:intergenic 35.0%
CTATTGGGAAAAGAAGAAAG+AGG - chr5_2:45585536-45585555 Msa0771910:three_prime_UTR 35.0%
!! AAGAAAGAGGTGTTGTTGAA+TGG - chr5_2:45585549-45585568 Msa0771910:three_prime_UTR 35.0%
TGGGGTTGAACAACAAAAAA+GGG - chr5_2:45585572-45585591 Msa0771910:exon 35.0%
CCAAATTGTGATCGATAATG+TGG + chr5_2:45585790-45585809 None:intergenic 35.0%
CCACATTATCGATCACAATT+TGG - chr5_2:45585787-45585806 Msa0771910:intron 35.0%
TGGAGACACAACATTTACTA+AGG - chr5_2:45585807-45585826 Msa0771910:intron 35.0%
AAACTCCAACTGATGAAATG+AGG - chr5_2:45585854-45585873 Msa0771910:intron 35.0%
TATGTCCTCATTTCATCAGT+TGG + chr5_2:45585862-45585881 None:intergenic 35.0%
CTCTTCTTCCATCAATTACT+GGG + chr5_2:45586118-45586137 None:intergenic 35.0%
GTCAAATAGATCGATTGTTG+TGG + chr5_2:45586279-45586298 None:intergenic 35.0%
GTAACTCATAGTCAGTCAAA+GGG - chr5_2:45586925-45586944 Msa0771910:intron 35.0%
TAACTCATAGTCAGTCAAAG+GGG - chr5_2:45586926-45586945 Msa0771910:intron 35.0%
ACAATGAGACCTACTGTAAT+TGG + chr5_2:45587033-45587052 None:intergenic 35.0%
TAGAGTAAGGTTACATAAGG+GGG + chr5_2:45587184-45587203 None:intergenic 35.0%
TGGATATGATCATCTATGCA+TGG + chr5_2:45587238-45587257 None:intergenic 35.0%
!! TACAAAAGTACCAAGAGATG+GGG + chr5_2:45587793-45587812 None:intergenic 35.0%
!! CATACAAAAGTACCAAGAGA+TGG + chr5_2:45587795-45587814 None:intergenic 35.0%
AACATTGTGACGAATAGGAT+TGG - chr5_2:45588073-45588092 Msa0771910:intron 35.0%
AAATTTCACGGTTCTTCTCA+AGG - chr5_2:45588186-45588205 Msa0771910:intron 35.0%
AATTTCACGGTTCTTCTCAA+GGG - chr5_2:45588187-45588206 Msa0771910:intron 35.0%
CCTTGGAATGGCATAATATT+GGG - chr5_2:45588210-45588229 Msa0771910:intron 35.0%
CTTGGAATGGCATAATATTG+GGG - chr5_2:45588211-45588230 Msa0771910:intron 35.0%
TTGGAATGGCATAATATTGG+GGG - chr5_2:45588212-45588231 Msa0771910:intron 35.0%
TGGTCGAGATGACATTATAA+TGG + chr5_2:45588669-45588688 None:intergenic 35.0%
! TCCTTCCATTTTCTACTTGA+TGG - chr5_2:45588709-45588728 Msa0771910:intron 35.0%
! CCTTCCATTTTCTACTTGAT+GGG - chr5_2:45588710-45588729 Msa0771910:intron 35.0%
!! CCTCCTTTTTCATGTAACTA+AGG + chr5_2:45588760-45588779 None:intergenic 35.0%
CCTTAGTTACATGAAAAAGG+AGG - chr5_2:45588757-45588776 Msa0771910:intron 35.0%
ATTATGACTCACTTCAGTGA+TGG + chr5_2:45588783-45588802 None:intergenic 35.0%
!! GTTAATTTGTGAGGTGTTTC+CGG + chr5_2:45588973-45588992 None:intergenic 35.0%
ATGGTAGAGTTCTATTGTTG+TGG + chr5_2:45589013-45589032 None:intergenic 35.0%
TAGCTGCAAACAAAGTTGAA+AGG + chr5_2:45589118-45589137 None:intergenic 35.0%
TGTAGTAGGGTAGTATAGAT+AGG + chr5_2:45589477-45589496 None:intergenic 35.0%
AAAGATTACCACTAGGAGAA+GGG + chr5_2:45589574-45589593 None:intergenic 35.0%
AGGATAGAAAGATTACCACT+AGG + chr5_2:45589581-45589600 None:intergenic 35.0%
TTGACACTGATATTCAACCT+TGG - chr5_2:45589667-45589686 Msa0771910:intron 35.0%
AAGTAAGCGTCATTTGTGAT+TGG - chr5_2:45589996-45590015 Msa0771910:intron 35.0%
GAATAGAGAGAATTAGAGTG+GGG - chr5_2:45590105-45590124 Msa0771910:intron 35.0%
AATAGAGAGAATTAGAGTGG+GGG - chr5_2:45590106-45590125 Msa0771910:intron 35.0%
AAAGAAACAGTGAATGCATG+TGG - chr5_2:45590341-45590360 Msa0771910:intron 35.0%
!! AAAGCAAAGACCATTTTGAC+TGG + chr5_2:45590401-45590420 None:intergenic 35.0%
ACAATCAAAATATGCCCTTG+TGG - chr5_2:45590761-45590780 Msa0771910:intron 35.0%
ACTAAATACATATACCCCCA+TGG - chr5_2:45590855-45590874 Msa0771910:intron 35.0%
TTTCTCTCTCATCTTACCAT+GGG + chr5_2:45590874-45590893 None:intergenic 35.0%
! TTTTCTCTCTCATCTTACCA+TGG + chr5_2:45590875-45590894 None:intergenic 35.0%
CTTATATCCCTCCATGTTTA+GGG - chr5_2:45590974-45590993 Msa0771910:intron 35.0%
!!! GATGATGAGCCTTTTTTGAA+AGG + chr5_2:45591918-45591937 None:intergenic 35.0%
!! TAGCATACGGAGTTGATTTT+TGG + chr5_2:45592177-45592196 None:intergenic 35.0%
ATCCTACTACAACCATAGAA+TGG + chr5_2:45592296-45592315 None:intergenic 35.0%
ATTCACCTTACTACATTCTC+TGG - chr5_2:45592496-45592515 Msa0771910:intron 35.0%
TCATGACATTATAGAGACAG+AGG - chr5_2:45592725-45592744 Msa0771910:intron 35.0%
TTAGAAAAACCAGTTCGTGA+AGG - chr5_2:45592815-45592834 Msa0771910:intron 35.0%
! TGCATGGCTACTCTATTTTA+AGG + chr5_2:45592851-45592870 None:intergenic 35.0%
TGATACTAATTACCCTAAGG+AGG - chr5_2:45592922-45592941 Msa0771910:intron 35.0%
TAATGTAAGGTTCCTCCTTA+GGG + chr5_2:45592937-45592956 None:intergenic 35.0%
GGGAGATTTGTAGTATGATT+GGG + chr5_2:45593083-45593102 None:intergenic 35.0%
TGGGAGATTTGTAGTATGAT+TGG + chr5_2:45593084-45593103 None:intergenic 35.0%
CAAGTTTCATAGCACAACAT+GGG + chr5_2:45593103-45593122 None:intergenic 35.0%
! TAGCGATTCTCCTTTTTCTT+CGG + chr5_2:45593130-45593149 None:intergenic 35.0%
CACTCTTTATCTGCTTAATG+TGG + chr5_2:45593174-45593193 None:intergenic 35.0%
TTAACAAGCTGCATATCATG+TGG + chr5_2:45593607-45593626 None:intergenic 35.0%
!! TCTGGATTTGGTGAACAAAA+AGG - chr5_2:45594253-45594272 Msa0771910:CDS 35.0%
GATTGAAGGAACAAACAGAA+TGG - chr5_2:45594739-45594758 Msa0771910:intron 35.0%
! TTTTATGCGACGTTACCTTT+TGG + chr5_2:45595058-45595077 None:intergenic 35.0%
AGAGTGGTTATACATAGAGA+TGG - chr5_2:45595924-45595943 Msa0771910:intron 35.0%
GAGTGGTTATACATAGAGAT+GGG - chr5_2:45595925-45595944 Msa0771910:intron 35.0%
GGGTGATTATGAAACTGAAA+TGG - chr5_2:45595945-45595964 Msa0771910:intron 35.0%
! TGTTGATTGAAAAGGATGTG+AGG - chr5_2:45596006-45596025 Msa0771910:intron 35.0%
TTGAATTTGAATTGGTGCAG+AGG - chr5_2:45596130-45596149 Msa0771910:intron 35.0%
CATAAATGCATGAAGCAGAA+AGG + chr5_2:45596248-45596267 None:intergenic 35.0%
! ATGCACTATTACAGCTTTTC+TGG + chr5_2:45596277-45596296 None:intergenic 35.0%
!!! CAAAACCCATTTTGAAATGG+AGG + chr5_2:45596330-45596349 None:intergenic 35.0%
TAAATTTCCCTCCAAGAAAG+GGG + chr5_2:45596381-45596400 None:intergenic 35.0%
CTAAATTTCCCTCCAAGAAA+GGG + chr5_2:45596382-45596401 None:intergenic 35.0%
TCTAAATTTCCCTCCAAGAA+AGG + chr5_2:45596383-45596402 None:intergenic 35.0%
! AATTTGACACATTGGATTGG+AGG - chr5_2:45596550-45596569 Msa0771910:intron 35.0%
GAATTTGTATTCACAGAAGG+AGG + chr5_2:45597116-45597135 None:intergenic 35.0%
GCAGAATTTGTATTCACAGA+AGG + chr5_2:45597119-45597138 None:intergenic 35.0%
AGGTGAGTCAAAAAGGAAAT+AGG - chr5_2:45597289-45597308 Msa0771910:intron 35.0%
AGATCATATCGACAAGTTCA+TGG + chr5_2:45597451-45597470 None:intergenic 35.0%
GGACTTTCACCTGTTTAAAT+TGG + chr5_2:45597775-45597794 None:intergenic 35.0%
TCGGAAAGTTCAAATACTCA+AGG - chr5_2:45598009-45598028 Msa0771910:intron 35.0%
CGGAAAGTTCAAATACTCAA+GGG - chr5_2:45598010-45598029 Msa0771910:intron 35.0%
! TATACAGGTTGAAACTAAGG+GGG + chr5_2:45598066-45598085 None:intergenic 35.0%
! ATGACTTGTGTTCTTCACTA+TGG - chr5_2:45598168-45598187 Msa0771910:five_prime_UTR 35.0%
TCACTATGGCATTCCAAATT+TGG - chr5_2:45598182-45598201 Msa0771910:five_prime_UTR 35.0%
GGACTGATTAATCAACTTCA+TGG - chr5_2:45598203-45598222 Msa0771910:five_prime_UTR 35.0%
ATAGAGAGAGAAGAGAGTAG+TGG + chr5_2:45585356-45585375 None:intergenic 40.0%
GATGATGTGGTATGGTTGTT+TGG + chr5_2:45585455-45585474 None:intergenic 40.0%
AAGAGAAAAGAGAGAGAGGT+GGG + chr5_2:45585497-45585516 None:intergenic 40.0%
TAAGAGAAAAGAGAGAGAGG+TGG + chr5_2:45585498-45585517 None:intergenic 40.0%
!! AAAGAGGTGTTGTTGAATGG+TGG - chr5_2:45585552-45585571 Msa0771910:three_prime_UTR 40.0%
!! AAGAGGTGTTGTTGAATGGT+GGG - chr5_2:45585553-45585572 Msa0771910:three_prime_UTR 40.0%
GTGGGGTTGAACAACAAAAA+AGG - chr5_2:45585571-45585590 Msa0771910:exon 40.0%
TGCATCAAGTGTACTACTCT+TGG + chr5_2:45585691-45585710 None:intergenic 40.0%
!!! TTTTTGTTGGAGGACTAGCT+TGG - chr5_2:45585830-45585849 Msa0771910:intron 40.0%
!!! TTTTGTTGGAGGACTAGCTT+GGG - chr5_2:45585831-45585850 Msa0771910:intron 40.0%
TGATCCAGAATCAGCTAGAA+GGG - chr5_2:45586076-45586095 Msa0771910:intron 40.0%
GATCCAAACCCAGTAATTGA+TGG - chr5_2:45586107-45586126 Msa0771910:intron 40.0%
CTTCCATCAATTACTGGGTT+TGG + chr5_2:45586113-45586132 None:intergenic 40.0%
GCTCTTCTTCCATCAATTAC+TGG + chr5_2:45586119-45586138 None:intergenic 40.0%
ATAGATCGATTGTTGTGGGA+CGG + chr5_2:45586274-45586293 None:intergenic 40.0%
GGTTGTAATGTAATGCTGCA+GGG - chr5_2:45586698-45586717 Msa0771910:intron 40.0%
CAGTGATGTACCAACCATAT+GGG - chr5_2:45586839-45586858 Msa0771910:intron 40.0%
ACATAGCGAACTTACCCATA+TGG + chr5_2:45586856-45586875 None:intergenic 40.0%
ATATGGGTAAGTTCGCTATG+TGG - chr5_2:45586855-45586874 Msa0771910:intron 40.0%
GGTAACTCATAGTCAGTCAA+AGG - chr5_2:45586924-45586943 Msa0771910:intron 40.0%
TGAGACCTACTGTAATTGGA+GGG + chr5_2:45587029-45587048 None:intergenic 40.0%
ATGAGACCTACTGTAATTGG+AGG + chr5_2:45587030-45587049 None:intergenic 40.0%
GAGTAAGGCAGAACAAAGTT+TGG + chr5_2:45587115-45587134 None:intergenic 40.0%
AGAGTAAGGTTACATAAGGG+GGG + chr5_2:45587183-45587202 None:intergenic 40.0%
TAGATATGTAGTCCATGGCA+TGG - chr5_2:45587675-45587694 Msa0771910:intron 40.0%
CACATGTAGTGGTCCTATAT+AGG - chr5_2:45587725-45587744 Msa0771910:intron 40.0%
TGTAGTGGTCCTATATAGGT+AGG - chr5_2:45587729-45587748 Msa0771910:intron 40.0%
TGATAAAATCCCCCATCTCT+TGG - chr5_2:45587780-45587799 Msa0771910:intron 40.0%
!! ACAAAAGTACCAAGAGATGG+GGG + chr5_2:45587792-45587811 None:intergenic 40.0%
CTGGTGAGAAAATGACATGA+TGG + chr5_2:45587825-45587844 None:intergenic 40.0%
TAATCTGCTTGACTCAACTC+TGG + chr5_2:45587983-45588002 None:intergenic 40.0%
AGAGTTGAGTCAAGCAGATT+AGG - chr5_2:45587982-45588001 Msa0771910:intron 40.0%
! GTTTTTCATAGGTTCCTCCA+CGG + chr5_2:45588099-45588118 None:intergenic 40.0%
GCCTTGGAATGGCATAATAT+TGG - chr5_2:45588209-45588228 Msa0771910:intron 40.0%
CCCAATATTATGCCATTCCA+AGG + chr5_2:45588213-45588232 None:intergenic 40.0%
CCCATCAAGTAGAAAATGGA+AGG + chr5_2:45588713-45588732 None:intergenic 40.0%
!! ATAGCTTTTGGTTGTCGTGT+GGG + chr5_2:45588918-45588937 None:intergenic 40.0%
!! AATAGCTTTTGGTTGTCGTG+TGG + chr5_2:45588919-45588938 None:intergenic 40.0%
! ATTGTGCTTGCTGAATCTGT+GGG + chr5_2:45589322-45589341 None:intergenic 40.0%
! TATTGTGCTTGCTGAATCTG+TGG + chr5_2:45589323-45589342 None:intergenic 40.0%
TGGACCATCATCTTCAACAA+TGG - chr5_2:45589358-45589377 Msa0771910:intron 40.0%
GGACCATCATCTTCAACAAT+GGG - chr5_2:45589359-45589378 Msa0771910:intron 40.0%
GAACCCATTGTTGAAGATGA+TGG + chr5_2:45589365-45589384 None:intergenic 40.0%
GTAGGGTAGTATAGATAGGA+TGG + chr5_2:45589473-45589492 None:intergenic 40.0%
ATACTACCCTACTACACCAA+TGG - chr5_2:45589481-45589500 Msa0771910:intron 40.0%
! GGAGAAGGTTGCCTTATTAA+TGG + chr5_2:45589548-45589567 None:intergenic 40.0%
AAGATTACCACTAGGAGAAG+GGG + chr5_2:45589573-45589592 None:intergenic 40.0%
GAAAGATTACCACTAGGAGA+AGG + chr5_2:45589575-45589594 None:intergenic 40.0%
AGTGGGGGTAAAAAGAAAGA+GGG - chr5_2:45590121-45590140 Msa0771910:intron 40.0%
TTGCTATAACATGTGGACAC+AGG - chr5_2:45590209-45590228 Msa0771910:intron 40.0%
TGCTATAACATGTGGACACA+GGG - chr5_2:45590210-45590229 Msa0771910:intron 40.0%
!! GGTCTTTGCTTTTCATGCAT+TGG - chr5_2:45590409-45590428 Msa0771910:intron 40.0%
TTCTCTCTCATCTTACCATG+GGG + chr5_2:45590873-45590892 None:intergenic 40.0%
TTCTTCAAACATGGGGACAT+AGG + chr5_2:45590927-45590946 None:intergenic 40.0%
GCTTATATCCCTCCATGTTT+AGG - chr5_2:45590973-45590992 Msa0771910:intron 40.0%
AGAGTGAGAGATTGAAAGTG+TGG - chr5_2:45591202-45591221 Msa0771910:intron 40.0%
ATGGCACATCAGATAGCATA+CGG + chr5_2:45592190-45592209 None:intergenic 40.0%
GTGCCATATGCTCTTAGTAA+CGG - chr5_2:45592203-45592222 Msa0771910:intron 40.0%
TCACTACCATCTCCATTCTA+TGG - chr5_2:45592281-45592300 Msa0771910:intron 40.0%
CTACAACCATAGAATGGAGA+TGG + chr5_2:45592290-45592309 None:intergenic 40.0%
CTCCATTCTATGGTTGTAGT+AGG - chr5_2:45592291-45592310 Msa0771910:intron 40.0%
TGTAGCCAGAGAATGTAGTA+AGG + chr5_2:45592504-45592523 None:intergenic 40.0%
ATTACATCTCCTTCACGAAC+TGG + chr5_2:45592827-45592846 None:intergenic 40.0%
CTAATGTAAGGTTCCTCCTT+AGG + chr5_2:45592938-45592957 None:intergenic 40.0%
AGGAGGAACCTTACATTAGT+AGG - chr5_2:45592939-45592958 Msa0771910:intron 40.0%
CCAAGTTTCATAGCACAACA+TGG + chr5_2:45593104-45593123 None:intergenic 40.0%
CCATGTTGTGCTATGAAACT+TGG - chr5_2:45593101-45593120 Msa0771910:intron 40.0%
! AGCGATTCTCCTTTTTCTTC+GGG + chr5_2:45593129-45593148 None:intergenic 40.0%
!! CAGAATTGCAGTTCTGGATT+TGG - chr5_2:45594241-45594260 Msa0771910:CDS 40.0%
AAGCGCAACAAACAGATTGA+AGG - chr5_2:45594725-45594744 Msa0771910:intron 40.0%
!! GGTTTTGTCAAAAGAGAGGA+TGG - chr5_2:45594846-45594865 Msa0771910:intron 40.0%
GGTAACGTCGCATAAAATTC+AGG - chr5_2:45595061-45595080 Msa0771910:intron 40.0%
! TGAATCGAAACTTTGATGGC+TGG + chr5_2:45595248-45595267 None:intergenic 40.0%
!! GTTCTGGGCTATGAATGTTT+TGG + chr5_2:45595659-45595678 None:intergenic 40.0%
GGATAATACGATGCAGTTCT+GGG + chr5_2:45595674-45595693 None:intergenic 40.0%
GTTTGAATCGCGTCTAAATC+AGG + chr5_2:45595852-45595871 None:intergenic 40.0%
GAGAGAGAAGAAGAAAGAAG+TGG - chr5_2:45596079-45596098 Msa0771910:intron 40.0%
GTGGTGAGAGATTTGAATTC+TGG - chr5_2:45596098-45596117 Msa0771910:intron 40.0%
AATTTGAATTGGTGCAGAGG+TGG - chr5_2:45596133-45596152 Msa0771910:intron 40.0%
! AGGCTGAAGAGTGAAACTTT+TGG - chr5_2:45596199-45596218 Msa0771910:intron 40.0%
! AAACTTTTGGCCGTGATTAC+AGG - chr5_2:45596212-45596231 Msa0771910:intron 40.0%
! AACTTTTGGCCGTGATTACA+GGG - chr5_2:45596213-45596232 Msa0771910:intron 40.0%
! AGTATTGGGCTTGTCATAAG+TGG - chr5_2:45596303-45596322 Msa0771910:intron 40.0%
GTATTGGGCTTGTCATAAGT+GGG - chr5_2:45596304-45596323 Msa0771910:intron 40.0%
CATGTGAAGGTGAGTCAAAA+AGG - chr5_2:45597282-45597301 Msa0771910:intron 40.0%
GACAAGTTCATGGTGCAATT+TGG + chr5_2:45597441-45597460 None:intergenic 40.0%
! ATACAGGTTGAAACTAAGGG+GGG + chr5_2:45598065-45598084 None:intergenic 40.0%
AGTGAAGAACACAAGTCATG+TGG + chr5_2:45598167-45598186 None:intergenic 40.0%
! AGAGAGAAGAGAGTAGTGGA+GGG + chr5_2:45585352-45585371 None:intergenic 45.0%
AAAAGAGAGAGAGGTGGGTA+TGG + chr5_2:45585492-45585511 None:intergenic 45.0%
!! AGAGGTGTTGTTGAATGGTG+GGG - chr5_2:45585554-45585573 Msa0771910:three_prime_UTR 45.0%
GTGATCCAGAATCAGCTAGA+AGG - chr5_2:45586075-45586094 Msa0771910:intron 45.0%
!! TAATTACCTCTTGGTGGCGA+TGG + chr5_2:45586176-45586195 None:intergenic 45.0%
TAGATCGATTGTTGTGGGAC+GGG + chr5_2:45586273-45586292 None:intergenic 45.0%
GGGTTGTAATGTAATGCTGC+AGG - chr5_2:45586697-45586716 Msa0771910:intron 45.0%
TGTAATGTAATGCTGCAGGG+AGG - chr5_2:45586701-45586720 Msa0771910:intron 45.0%
GTAATGTAATGCTGCAGGGA+GGG - chr5_2:45586702-45586721 Msa0771910:intron 45.0%
TAATGTAATGCTGCAGGGAG+GGG - chr5_2:45586703-45586722 Msa0771910:intron 45.0%
! CCATATGGTTGGTACATCAC+TGG + chr5_2:45586841-45586860 None:intergenic 45.0%
CCAGTGATGTACCAACCATA+TGG - chr5_2:45586838-45586857 Msa0771910:intron 45.0%
AGCGAACTTACCCATATGGT+TGG + chr5_2:45586852-45586871 None:intergenic 45.0%
! ATAGTCAGTCAAAGGGGTAC+TGG - chr5_2:45586932-45586951 Msa0771910:intron 45.0%
AGACCTACTGTAATTGGAGG+GGG + chr5_2:45587027-45587046 None:intergenic 45.0%
GAGACCTACTGTAATTGGAG+GGG + chr5_2:45587028-45587047 None:intergenic 45.0%
!!! GCTTGTTTTCAGGGTTAGCT+AGG + chr5_2:45587384-45587403 None:intergenic 45.0%
TGGAAAGGGGGGATATAATG+TGG - chr5_2:45587542-45587561 Msa0771910:intron 45.0%
AAAGGGGGGATATAATGTGG+TGG - chr5_2:45587545-45587564 Msa0771910:intron 45.0%
AAGGGGGGATATAATGTGGT+GGG - chr5_2:45587546-45587565 Msa0771910:intron 45.0%
CCTCTCAGGGTTAACACTAT+TGG + chr5_2:45588394-45588413 None:intergenic 45.0%
CCAATAGTGTTAACCCTGAG+AGG - chr5_2:45588391-45588410 Msa0771910:intron 45.0%
!! TAGCTTTTGGTTGTCGTGTG+GGG + chr5_2:45588917-45588936 None:intergenic 45.0%
GTTGAAAATGTACCCCTTGG+TGG + chr5_2:45589422-45589441 None:intergenic 45.0%
! GGTGTTGAAAATGTACCCCT+TGG + chr5_2:45589425-45589444 None:intergenic 45.0%
AGCTTGTATGCGATGTGGTT+GGG + chr5_2:45589447-45589466 None:intergenic 45.0%
TACCCTACTACACCAATGGA+AGG - chr5_2:45589485-45589504 Msa0771910:intron 45.0%
CTCCTTCCATTGGTGTAGTA+GGG + chr5_2:45589490-45589509 None:intergenic 45.0%
GAGAAAGTTGCTCCTTCCAT+TGG + chr5_2:45589500-45589519 None:intergenic 45.0%
CTACGGTAGTTAACTACCGT+CGG + chr5_2:45589927-45589946 None:intergenic 45.0%
GAGTGGGGGTAAAAAGAAAG+AGG - chr5_2:45590120-45590139 Msa0771910:intron 45.0%
GTGGGGGTAAAAAGAAAGAG+GGG - chr5_2:45590122-45590141 Msa0771910:intron 45.0%
GCTATAACATGTGGACACAG+GGG - chr5_2:45590211-45590230 Msa0771910:intron 45.0%
AGCTCATTCACATGGGTCTT+GGG + chr5_2:45590250-45590269 None:intergenic 45.0%
CCAAGACAGCTCATTCACAT+GGG + chr5_2:45590257-45590276 None:intergenic 45.0%
ACCAAGACAGCTCATTCACA+TGG + chr5_2:45590258-45590277 None:intergenic 45.0%
GCATGTGGTTTCTGTATGCA+TGG - chr5_2:45590356-45590375 Msa0771910:intron 45.0%
TGTGGTTTCTGTATGCATGG+TGG - chr5_2:45590359-45590378 Msa0771910:intron 45.0%
ACCATGTTCGTTGTCCACAA+GGG + chr5_2:45590778-45590797 None:intergenic 45.0%
TACCATGTTCGTTGTCCACA+AGG + chr5_2:45590779-45590798 None:intergenic 45.0%
TCTCTCTCATCTTACCATGG+GGG + chr5_2:45590872-45590891 None:intergenic 45.0%
CAAAGAATACGGGAGGCTTA+AGG + chr5_2:45591540-45591559 None:intergenic 45.0%
CTTAAGCCTCCCGTATTCTT+TGG - chr5_2:45591538-45591557 Msa0771910:intron 45.0%
ATGTCTCCAAAGAATACGGG+AGG + chr5_2:45591547-45591566 None:intergenic 45.0%
! AGGCCGTTACTAAGAGCATA+TGG + chr5_2:45592209-45592228 None:intergenic 45.0%
!! TGTCTTTTCTGGTGCAGCAA+AGG + chr5_2:45592353-45592372 None:intergenic 45.0%
AACTTGGCTCCCGAAGAAAA+AGG - chr5_2:45593117-45593136 Msa0771910:intron 45.0%
ACTGCTCAGAATTGCAGTTC+TGG - chr5_2:45594235-45594254 Msa0771910:CDS 45.0%
! CAAGGTGGAGCTCTATCTTT+TGG + chr5_2:45594417-45594436 None:intergenic 45.0%
TAGAGGCTATGCCACTATTC+TGG - chr5_2:45594460-45594479 Msa0771910:CDS 45.0%
AGAGGCTATGCCACTATTCT+GGG - chr5_2:45594461-45594480 Msa0771910:CDS 45.0%
TCCATCGTTCTTTCAGTCGT+CGG - chr5_2:45594825-45594844 Msa0771910:intron 45.0%
!!! CGTCGGTTTTGTCAAAAGAG+AGG - chr5_2:45594842-45594861 Msa0771910:intron 45.0%
! ACTTTGATGGCTGGTTCCAA+AGG + chr5_2:45595239-45595258 None:intergenic 45.0%
GGGATAATACGATGCAGTTC+TGG + chr5_2:45595675-45595694 None:intergenic 45.0%
TGATGATATCGACGACGACA+TGG + chr5_2:45595903-45595922 None:intergenic 45.0%
TCGTCGATATCATCAGAGAG+TGG - chr5_2:45595908-45595927 Msa0771910:intron 45.0%
GGATGTGAGGATGAGAAGAA+TGG - chr5_2:45596019-45596038 Msa0771910:intron 45.0%
ATGGAGAGAGAGTGAGAGAT+TGG - chr5_2:45596038-45596057 Msa0771910:intron 45.0%
GAGAGAGTGAGAGATTGGAT+TGG - chr5_2:45596043-45596062 Msa0771910:intron 45.0%
TTCACTCTTCAGCCTCTTTG+TGG + chr5_2:45596194-45596213 None:intergenic 45.0%
GAACGCTTTCCCTGTAATCA+CGG + chr5_2:45596225-45596244 None:intergenic 45.0%
AGTGGGCCTCCATTTCAAAA+TGG - chr5_2:45596321-45596340 Msa0771910:intron 45.0%
GTGGGCCTCCATTTCAAAAT+GGG - chr5_2:45596322-45596341 Msa0771910:intron 45.0%
AAGAAACACCCCTTTCTTGG+AGG - chr5_2:45596370-45596389 Msa0771910:intron 45.0%
AGAAACACCCCTTTCTTGGA+GGG - chr5_2:45596371-45596390 Msa0771910:intron 45.0%
AGGTACTTAAATCGTGCCCT+AGG - chr5_2:45596986-45597005 Msa0771910:intron 45.0%
GAAGGAGGAGAAACCATTAG+AGG + chr5_2:45597101-45597120 None:intergenic 45.0%
! TACAGGTTGAAACTAAGGGG+GGG + chr5_2:45598064-45598083 None:intergenic 45.0%
!! TTATATACTATTTATAATTT+CGG - chr5_2:45586247-45586266 Msa0771910:intron 5.0%
!!! ATTTTTTTTTTTAAATAGAT+CGG - chr5_2:45586457-45586476 Msa0771910:intron 5.0%
!! TATTATAATTATAATTATGA+AGG + chr5_2:45595026-45595045 None:intergenic 5.0%
!! CATAATTATAATTATAATAA+AGG - chr5_2:45595027-45595046 Msa0771910:intron 5.0%
!!! TTTTTATTTATTTGTTAAAT+AGG - chr5_2:45597312-45597331 Msa0771910:intron 5.0%
!!! TTTTATTTATTTGTTAAATA+GGG - chr5_2:45597313-45597332 Msa0771910:intron 5.0%
!! TTTAGAAAATAATATTAAAT+AGG + chr5_2:45597806-45597825 None:intergenic 5.0%
! GAGAGAAGAGAGTAGTGGAG+GGG + chr5_2:45585351-45585370 None:intergenic 50.0%
GAGAGAGAAGAGAGTAGTGG+AGG + chr5_2:45585353-45585372 None:intergenic 50.0%
! CAAGCCCTTCTAGCTGATTC+TGG + chr5_2:45586083-45586102 None:intergenic 50.0%
! GGAGGGGTACATATCAAGGT+GGG - chr5_2:45586719-45586738 Msa0771910:intron 50.0%
! GAGGGGTACATATCAAGGTG+GGG - chr5_2:45586720-45586739 Msa0771910:intron 50.0%
! AGGGGTACATATCAAGGTGG+GGG - chr5_2:45586721-45586740 Msa0771910:intron 50.0%
TACATATCAAGGTGGGGGTG+TGG - chr5_2:45586726-45586745 Msa0771910:intron 50.0%
! ACATATCAAGGTGGGGGTGT+GGG - chr5_2:45586727-45586746 Msa0771910:intron 50.0%
GGGAGCAGTCAAGAGACATA+TGG + chr5_2:45587007-45587026 None:intergenic 50.0%
TCCACGGCAAACACATGTAG+TGG - chr5_2:45587714-45587733 Msa0771910:intron 50.0%
ACCACTACATGTGTTTGCCG+TGG + chr5_2:45587718-45587737 None:intergenic 50.0%
CTGCTTGACTCAACTCTGGT+AGG + chr5_2:45587979-45587998 None:intergenic 50.0%
TCTTCTCAAGGGCCTTGGAA+TGG - chr5_2:45588198-45588217 Msa0771910:intron 50.0%
! CGTATTCAGGAGTGTAGGTG+GGG + chr5_2:45589141-45589160 None:intergenic 50.0%
! CCGTATTCAGGAGTGTAGGT+GGG + chr5_2:45589142-45589161 None:intergenic 50.0%
CCCACCTACACTCCTGAATA+CGG - chr5_2:45589139-45589158 Msa0771910:intron 50.0%
CCACCTACACTCCTGAATAC+GGG - chr5_2:45589140-45589159 Msa0771910:intron 50.0%
! GTACCCGTATTCAGGAGTGT+AGG + chr5_2:45589146-45589165 None:intergenic 50.0%
!! ACTTGAGGGTACCCGTATTC+AGG + chr5_2:45589154-45589173 None:intergenic 50.0%
GGAGGGAGATGCTTACTTGA+GGG + chr5_2:45589168-45589187 None:intergenic 50.0%
TATGCAAGCAGCACCACCAA+GGG - chr5_2:45589406-45589425 Msa0771910:intron 50.0%
GCTTGTATGCGATGTGGTTG+GGG + chr5_2:45589446-45589465 None:intergenic 50.0%
CAGCTTGTATGCGATGTGGT+TGG + chr5_2:45589448-45589467 None:intergenic 50.0%
CAACCACATCGCATACAAGC+TGG - chr5_2:45589446-45589465 Msa0771910:intron 50.0%
GCTCCTTCCATTGGTGTAGT+AGG + chr5_2:45589491-45589510 None:intergenic 50.0%
TTACCACTAGGAGAAGGGGT+AGG + chr5_2:45589569-45589588 None:intergenic 50.0%
CAGCTCATTCACATGGGTCT+TGG + chr5_2:45590251-45590270 None:intergenic 50.0%
CCCATGTGAATGAGCTGTCT+TGG - chr5_2:45590254-45590273 Msa0771910:intron 50.0%
GCGGGGCATATATGCAGATA+TGG - chr5_2:45593431-45593450 Msa0771910:intron 50.0%
! GCATTTCTGCCCCGTGTTTT+AGG - chr5_2:45593461-45593480 Msa0771910:intron 50.0%
!! TTTCTGCCCCGTGTTTTAGG+AGG - chr5_2:45593464-45593483 Msa0771910:intron 50.0%
AGTCCCTCCTCCTAAAACAC+GGG + chr5_2:45593474-45593493 None:intergenic 50.0%
GAGTCCCTCCTCCTAAAACA+CGG + chr5_2:45593475-45593494 None:intergenic 50.0%
! ATTCTGCGCTGATCACTGTG+TGG + chr5_2:45594334-45594353 None:intergenic 50.0%
CTCAGTCCGAACAGTTTCGT+AGG + chr5_2:45594365-45594384 None:intergenic 50.0%
GAAGGTTGGCGAGCGAAAAT+GGG + chr5_2:45594389-45594408 None:intergenic 50.0%
TGAAGGTTGGCGAGCGAAAA+TGG + chr5_2:45594390-45594409 None:intergenic 50.0%
GATGGAAGCAGCACACACTT+TGG + chr5_2:45594811-45594830 None:intergenic 50.0%
ACCGACGACTGAAAGAACGA+TGG + chr5_2:45594829-45594848 None:intergenic 50.0%
GGCAAGAAACACCCCTTTCT+TGG - chr5_2:45596367-45596386 Msa0771910:intron 50.0%
ACCTCATCAGAGACAGCATC+TGG - chr5_2:45597973-45597992 Msa0771910:five_prime_UTR 50.0%
TCCAGATGCTGTCTCTGATG+AGG + chr5_2:45597977-45597996 None:intergenic 50.0%
! GCAGGGAGGGGTACATATCA+AGG - chr5_2:45586715-45586734 Msa0771910:intron 55.0%
! GGGAGGGGTACATATCAAGG+TGG - chr5_2:45586718-45586737 Msa0771910:intron 55.0%
! CATATCAAGGTGGGGGTGTG+GGG - chr5_2:45586728-45586747 Msa0771910:intron 55.0%
! GTTGCTCCTCCTGCCATTTG+TGG + chr5_2:45586811-45586830 None:intergenic 55.0%
!! GTCAAAGGGGTACTGGTCCA+TGG - chr5_2:45586939-45586958 Msa0771910:intron 55.0%
GCTCCCCCTCCAATTACAGT+AGG - chr5_2:45587021-45587040 Msa0771910:intron 55.0%
!! GTGACGAATAGGATTGGCCG+TGG - chr5_2:45588079-45588098 Msa0771910:intron 55.0%
!! ACGAATAGGATTGGCCGTGG+AGG - chr5_2:45588082-45588101 Msa0771910:intron 55.0%
ACGGTTCTTCTCAAGGGCCT+TGG - chr5_2:45588193-45588212 Msa0771910:intron 55.0%
! CCCGTATTCAGGAGTGTAGG+TGG + chr5_2:45589143-45589162 None:intergenic 55.0%
GGGAGGGAGATGCTTACTTG+AGG + chr5_2:45589169-45589188 None:intergenic 55.0%
CTATGCAAGCAGCACCACCA+AGG - chr5_2:45589405-45589424 Msa0771910:intron 55.0%
ATGCAAGCAGCACCACCAAG+GGG - chr5_2:45589407-45589426 Msa0771910:intron 55.0%
GGTCCAGCTTGTATGCGATG+TGG + chr5_2:45589452-45589471 None:intergenic 55.0%
CTAGGAGAAGGGGTAGGAGA+AGG + chr5_2:45589563-45589582 None:intergenic 55.0%
TCTCCTACCCCTTCTCCTAG+TGG - chr5_2:45589563-45589582 Msa0771910:intron 55.0%
TGGGTCTTGGGTTACCCATG+TGG + chr5_2:45590238-45590257 None:intergenic 55.0%
TATTTGCCCCGTGCAACGCA+CGG - chr5_2:45590503-45590522 Msa0771910:intron 55.0%
! TTTTTGCCCGTGCGTTGCAC+GGG + chr5_2:45590513-45590532 None:intergenic 55.0%
! CTTTTTGCCCGTGCGTTGCA+CGG + chr5_2:45590514-45590533 None:intergenic 55.0%
GCCCTTGTGGACAACGAACA+TGG - chr5_2:45590774-45590793 Msa0771910:intron 55.0%
!!! TGCCCCGTGTTTTAGGAGGA+GGG - chr5_2:45593468-45593487 Msa0771910:intron 55.0%
GTCCCTCCTCCTAAAACACG+GGG + chr5_2:45593473-45593492 None:intergenic 55.0%
GGAAGCAGCACACACTTTGG+CGG + chr5_2:45594808-45594827 None:intergenic 55.0%
!! CCTCTTGGTGGCGATGGTCT+AGG + chr5_2:45586170-45586189 None:intergenic 60.0%
CCTAGACCATCGCCACCAAG+AGG - chr5_2:45586167-45586186 Msa0771910:intron 60.0%
ATTTGTGGTGGCCCTCCTGC+CGG + chr5_2:45586796-45586815 None:intergenic 60.0%
! GCTCCTCCTGCCATTTGTGG+TGG + chr5_2:45586808-45586827 None:intergenic 60.0%
TGTGGACACAGGGGTCCACA+TGG - chr5_2:45590220-45590239 Msa0771910:intron 60.0%
GTGGACACAGGGGTCCACAT+GGG - chr5_2:45590221-45590240 Msa0771910:intron 60.0%
ATTTGCCCCGTGCAACGCAC+GGG - chr5_2:45590504-45590523 Msa0771910:intron 60.0%
! TTTTGCCCGTGCGTTGCACG+GGG + chr5_2:45590512-45590531 None:intergenic 60.0%
!!! CTGCCCCGTGTTTTAGGAGG+AGG - chr5_2:45593467-45593486 Msa0771910:intron 60.0%
ACACTTTGGCGGCGGAGGTA+AGG + chr5_2:45594797-45594816 None:intergenic 60.0%
AGCAGCACACACTTTGGCGG+CGG + chr5_2:45594805-45594824 None:intergenic 60.0%
AGCACCAGGAGGAGCAGCAG+CGG - chr5_2:45586756-45586775 Msa0771910:intron 65.0%
GGCAGGAGGGCCACCACAAA+TGG - chr5_2:45586795-45586814 Msa0771910:intron 65.0%
GGAGGGCCACCACAAATGGC+AGG - chr5_2:45586799-45586818 Msa0771910:intron 65.0%
GGGCCACCACAAATGGCAGG+AGG - chr5_2:45586802-45586821 Msa0771910:intron 65.0%
AGCACACACTTTGGCGGCGG+AGG + chr5_2:45594802-45594821 None:intergenic 65.0%
! CAAGGTGGGGGTGTGGGGAC+AGG - chr5_2:45586733-45586752 Msa0771910:intron 70.0%
!! GGTGTGGGGACAGGAGCACC+AGG - chr5_2:45586742-45586761 Msa0771910:intron 70.0%
!! GTGGGGACAGGAGCACCAGG+AGG - chr5_2:45586745-45586764 Msa0771910:intron 70.0%
TACGCCGCTGCTGCTCCTCC+TGG + chr5_2:45586763-45586782 None:intergenic 70.0%
GGAGGAGCAGCAGCGGCGTA+CGG - chr5_2:45586763-45586782 Msa0771910:intron 70.0%
AGCGGCGTACGGCGGTGTTC+CGG - chr5_2:45586774-45586793 Msa0771910:intron 70.0%
TACGGCGGTGTTCCGGCAGG+AGG - chr5_2:45586781-45586800 Msa0771910:intron 70.0%
ACGGCGGTGTTCCGGCAGGA+GGG - chr5_2:45586782-45586801 Msa0771910:intron 70.0%
GGAGCAGCAGCGGCGTACGG+CGG - chr5_2:45586766-45586785 Msa0771910:intron 75.0%
GCGTACGGCGGTGTTCCGGC+AGG - chr5_2:45586778-45586797 Msa0771910:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 45585331 45598290 45585331 ID=Msa0771910;Name=Msa0771910
chr5_2 mRNA 45585331 45598290 45585331 ID=Msa0771910-mRNA-1;Parent=Msa0771910;Name=Msa0771910-mRNA-1;_AED=0.04;_eAED=0.04;_QI=427|1|1|1|0.83|0.71|7|243|286
chr5_2 exon 45585331 45585668 45585331 ID=Msa0771910-mRNA-1:exon:13747;Parent=Msa0771910-mRNA-1
chr5_2 exon 45594037 45594316 45594037 ID=Msa0771910-mRNA-1:exon:13746;Parent=Msa0771910-mRNA-1
chr5_2 exon 45594450 45594486 45594450 ID=Msa0771910-mRNA-1:exon:13745;Parent=Msa0771910-mRNA-1
chr5_2 exon 45596761 45596902 45596761 ID=Msa0771910-mRNA-1:exon:13744;Parent=Msa0771910-mRNA-1
chr5_2 exon 45597433 45597556 45597433 ID=Msa0771910-mRNA-1:exon:13743;Parent=Msa0771910-mRNA-1
chr5_2 exon 45597661 45597993 45597661 ID=Msa0771910-mRNA-1:exon:13742;Parent=Msa0771910-mRNA-1
chr5_2 exon 45598014 45598290 45598014 ID=Msa0771910-mRNA-1:exon:13741;Parent=Msa0771910-mRNA-1
chr5_2 five_prime_UTR 45598014 45598290 45598014 ID=Msa0771910-mRNA-1:five_prime_utr;Parent=Msa0771910-mRNA-1
chr5_2 five_prime_UTR 45597844 45597993 45597844 ID=Msa0771910-mRNA-1:five_prime_utr;Parent=Msa0771910-mRNA-1
chr5_2 CDS 45597661 45597843 45597661 ID=Msa0771910-mRNA-1:cds;Parent=Msa0771910-mRNA-1
chr5_2 CDS 45597433 45597556 45597433 ID=Msa0771910-mRNA-1:cds;Parent=Msa0771910-mRNA-1
chr5_2 CDS 45596761 45596902 45596761 ID=Msa0771910-mRNA-1:cds;Parent=Msa0771910-mRNA-1
chr5_2 CDS 45594450 45594486 45594450 ID=Msa0771910-mRNA-1:cds;Parent=Msa0771910-mRNA-1
chr5_2 CDS 45594037 45594316 45594037 ID=Msa0771910-mRNA-1:cds;Parent=Msa0771910-mRNA-1
chr5_2 CDS 45585574 45585668 45585574 ID=Msa0771910-mRNA-1:cds;Parent=Msa0771910-mRNA-1
chr5_2 three_prime_UTR 45585331 45585573 45585331 ID=Msa0771910-mRNA-1:three_prime_utr;Parent=Msa0771910-mRNA-1
Gene Sequence

>Msa0771910

ATGGCTTATCCACATTATCGATCACAATTTGGAGACACAACATTTACTAAGGTTTTTGTTGGAGGACTAGCTTGGGAAACTCCAACTGATGAAATGAGGACATATTTTGAACAATTTGGTGACATACTTGAAGCTGTCATTATCACTGATAAGAATACAGGAAAATCTAAAGGATACGGATTTGTAACATTTCGTGATCCAGAATCAGCTAGAAGGGCTTGTGCTGATCCAAACCCAGTAATTGATGGAAGAAGAGCTAATTGTAACATTGCTTCTCTTGGTCGTCCTAGACCATCGCCACCAAGAGGGAGGGGTACATATCAAGGTGGGGGTGTGGGGACAGGAGCACCAGGAGGAGCAGCAGCGGCGTACGGCGGTGTTCCGGCAGGAGGGCCACCACAAATGGCAGGAGGAGCAACAGCAGCTCCAGTGATGTACCAACCATATGGCTACCCCACCTACACTCCTGAATACGGGTACCCTCAAGCTACAATGTATAACCCACAGATTCAGCAAGCACAATACTATCAACAACTTTATGGACCATCATCTTCAACAATGGGTTCACCATATTATTATGGCTATTCTATGCAAGCAGCACCACCAAGGGGTACATTTTCAACACCCCAACCACATCGCATACAAGCTGGACCATCCTATCTATACTACCCTACTACACCAATGGAAGGAGCAACTTTCTCTGCTGCATATCGTCCACTTCAACAACCATTAATAAGGCAACCTTCTCCTACCCCTTCTCCTAGTGATTCACAGACTCAGCAACGTACCTCATCAGAGACAGCATCTGGAGTAGTTATAACTTCGGAAAGTTCAAATACTCAAGGGAAGAACAACAACTAA
Protein sequence

>Msa0771910

MAYPHYRSQFGDTTFTKVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTYQGGGVGTGAPGGAAAAYGGVPAGGPPQMAGGATAAPVMYQPYGYPTYTPEYGYPQATMYNPQIQQAQYYQQLYGPSSSTMGSPYYYGYSMQAAPPRGTFSTPQPHRIQAGPSYLYYPTTPMEGATFSAAYRPLQQPLIRQPSPTPSPSDSQTQQRTSSETASGVVITSESSNTQGKNNN*