AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0810080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0810080 MtrunA17_Chr5g0426311 96.853 286 5 2 1 285 1 283 0.0 546
Msa0810080 MtrunA17_Chr3g0144311 59.794 194 70 5 7 198 20 207 3.97e-60 192
Msa0810080 MtrunA17_Chr4g0017401 64.800 125 31 4 9 120 9 133 1.92e-47 159
Msa0810080 MtrunA17_Chr8g0346011 77.273 88 20 0 7 94 28 115 1.29e-45 155
Msa0810080 MtrunA17_Chr7g0276531 73.333 90 24 0 8 97 10 99 1.19e-44 152
Msa0810080 MtrunA17_Chr3g0127751 69.565 92 27 1 8 99 18 108 1.89e-41 143
Msa0810080 MtrunA17_Chr2g0290191 40.367 109 49 3 17 110 5 112 2.03e-21 93.6
Msa0810080 MtrunA17_Chr2g0290191 29.530 149 94 3 17 158 107 251 3.02e-13 69.7
Msa0810080 MtrunA17_Chr4g0045921 48.193 83 43 0 12 94 72 154 2.68e-18 83.6
Msa0810080 MtrunA17_Chr8g0360551 44.578 83 46 0 12 94 69 151 3.76e-18 84.0
Msa0810080 MtrunA17_Chr8g0360551 32.500 120 73 2 12 124 161 279 4.24e-13 68.9
Msa0810080 MtrunA17_Chr3g0101061 38.750 80 48 1 5 84 29 107 7.52e-18 83.2
Msa0810080 MtrunA17_Chr7g0255011 41.667 84 49 0 11 94 122 205 5.73e-17 80.5
Msa0810080 MtrunA17_Chr1g0186351 38.750 80 48 1 12 91 2 80 4.62e-16 77.8
Msa0810080 MtrunA17_Chr4g0035051 44.595 74 40 1 17 89 9 82 9.84e-16 72.0
Msa0810080 MtrunA17_Chr5g0440831 39.759 83 50 0 12 94 161 243 1.23e-15 76.6
Msa0810080 MtrunA17_Chr7g0219021 42.169 83 46 2 17 98 41 122 6.17e-15 72.8
Msa0810080 MtrunA17_Chr2g0278661 41.892 74 42 1 12 84 3 76 8.68e-15 72.4
Msa0810080 MtrunA17_Chr4g0035031 43.421 76 42 1 17 91 9 84 2.84e-14 69.7
Msa0810080 MtrunA17_Chr5g0447761 40.000 75 44 1 17 91 7 80 2.94e-14 72.4
Msa0810080 MtrunA17_Chr3g0121631 40.580 69 41 0 16 84 36 104 1.78e-13 66.6
Msa0810080 MtrunA17_Chr4g0035001 41.892 74 42 1 17 89 7 80 2.06e-13 66.6
Msa0810080 MtrunA17_Chr4g0061451 40.964 83 47 2 16 97 42 123 3.81e-13 68.2
Msa0810080 MtrunA17_Chr4g0031091 42.254 71 40 1 16 85 33 103 7.30e-13 63.9
Msa0810080 MtrunA17_Chr3g0119311 37.037 81 41 2 16 96 36 106 9.41e-13 64.3
Msa0810080 MtrunA17_Chr4g0050781 42.029 69 39 1 17 84 8 76 1.04e-12 65.9
Msa0810080 MtrunA17_Chr3g0086861 40.449 89 51 2 10 97 38 125 1.34e-12 67.4
Msa0810080 MtrunA17_Chr1g0210241 34.940 83 50 1 16 98 7 85 1.50e-12 66.2
Msa0810080 MtrunA17_Chr7g0266751 34.831 89 54 1 17 105 33 117 3.01e-12 63.2
Msa0810080 MtrunA17_Chr3g0135111 37.500 80 49 1 12 91 6 84 9.69e-12 64.7
Msa0810080 MtrunA17_Chr7g0219031 42.424 66 37 1 17 81 41 106 3.92e-11 59.3
Msa0810080 MtrunA17_Chr3g0120721 34.722 72 46 1 17 88 19 89 7.26e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0810080 AT1G22330.1 65.534 206 51 7 5 202 6 199 1.89e-64 204
Msa0810080 AT1G78260.1 54.724 254 76 10 5 230 6 248 2.44e-57 186
Msa0810080 AT1G78260.2 57.874 254 68 10 5 230 6 248 8.27e-57 184
Msa0810080 AT1G76460.1 49.138 232 87 9 5 216 12 232 3.49e-54 177
Msa0810080 AT1G20880.2 78.947 95 19 1 5 98 12 106 5.74e-51 169
Msa0810080 AT1G20880.3 78.947 95 19 1 5 98 12 106 5.74e-51 169
Msa0810080 AT1G20880.1 78.947 95 19 1 5 98 12 106 5.74e-51 169
Msa0810080 AT1G33470.3 52.229 157 70 4 12 166 3 156 2.47e-46 156
Msa0810080 AT1G33470.1 52.229 157 70 4 12 166 3 156 3.21e-46 155
Msa0810080 AT2G46780.1 48.731 197 79 8 12 191 18 209 7.47e-45 155
Msa0810080 AT2G46780.2 48.731 197 79 8 12 191 18 209 7.47e-45 155
Msa0810080 AT1G33470.2 52.980 151 66 4 12 160 3 150 8.16e-45 152
Msa0810080 AT1G22910.2 69.388 98 28 1 10 105 7 104 1.71e-43 149
Msa0810080 AT1G22910.1 69.388 98 28 1 10 105 7 104 5.36e-43 147
Msa0810080 AT1G22910.3 67.308 104 27 2 10 111 7 105 1.01e-42 149
Msa0810080 AT3G54770.1 66.304 92 30 1 10 100 11 102 1.44e-37 134
Msa0810080 AT3G54770.3 66.304 92 30 1 10 100 11 102 2.10e-37 133
Msa0810080 AT5G11412.1 58.889 90 37 0 5 94 41 130 1.05e-34 124
Msa0810080 AT5G53680.1 49.000 100 47 2 5 101 3 101 1.44e-29 110
Msa0810080 AT5G53720.1 54.430 79 36 0 16 94 9 87 1.15e-25 98.2
Msa0810080 AT3G06970.1 47.423 97 50 1 12 107 8 104 1.39e-25 103
Msa0810080 AT3G54770.2 66.176 68 22 1 32 98 1 68 9.93e-25 99.4
Msa0810080 AT5G47620.1 47.826 69 35 1 16 84 6 73 2.52e-18 84.7
Msa0810080 AT5G47620.2 47.826 69 35 1 16 84 6 73 2.52e-18 84.7
Msa0810080 AT5G47620.5 47.826 69 35 1 16 84 6 73 2.52e-18 84.7
Msa0810080 AT5G47620.4 47.826 69 35 1 16 84 6 73 2.90e-18 84.7
Msa0810080 AT2G22090.2 43.373 83 47 0 12 94 100 182 1.55e-17 82.0
Msa0810080 AT2G22090.1 43.373 83 47 0 12 94 100 182 1.69e-17 81.6
Msa0810080 AT3G15010.1 45.783 83 45 0 12 94 71 153 3.14e-17 81.3
Msa0810080 AT3G15010.1 33.571 140 77 3 8 132 159 297 7.45e-16 77.4
Msa0810080 AT3G15010.2 45.783 83 45 0 12 94 71 153 3.14e-17 81.3
Msa0810080 AT3G15010.2 33.571 140 77 3 8 132 159 297 7.45e-16 77.4
Msa0810080 AT4G26650.1 41.667 72 41 1 13 84 12 82 3.21e-17 81.6
Msa0810080 AT4G26650.2 41.667 72 41 1 13 84 9 79 3.40e-17 81.6
Msa0810080 AT4G39260.3 40.625 96 45 3 17 111 7 91 4.69e-17 75.1
Msa0810080 AT5G55550.5 41.096 73 42 1 12 84 2 73 5.44e-17 80.9
Msa0810080 AT5G55550.4 41.096 73 42 1 12 84 2 73 5.44e-17 80.9
Msa0810080 AT5G55550.9 41.096 73 42 1 12 84 2 73 5.44e-17 80.9
Msa0810080 AT5G55550.7 41.096 73 42 1 12 84 2 73 5.44e-17 80.9
Msa0810080 AT5G55550.1 41.096 73 42 1 12 84 2 73 5.44e-17 80.9
Msa0810080 AT5G55550.8 41.096 73 42 1 12 84 2 73 6.87e-17 80.9
Msa0810080 AT5G55550.2 41.096 73 42 1 12 84 2 73 6.93e-17 80.9
Msa0810080 AT5G55550.3 41.096 73 42 1 12 84 2 73 6.93e-17 80.9
Msa0810080 AT5G55550.6 41.096 73 42 1 12 84 2 73 6.93e-17 80.9
Msa0810080 AT5G55550.11 41.096 73 42 1 12 84 2 73 6.93e-17 80.9
Msa0810080 AT5G55550.10 41.096 73 42 1 12 84 2 73 7.42e-17 80.9
Msa0810080 AT4G39260.2 43.421 76 42 1 17 91 7 82 7.98e-17 75.5
Msa0810080 AT4G39260.1 43.421 76 42 1 17 91 7 82 2.19e-16 75.5
Msa0810080 AT4G13850.3 40.909 88 48 2 16 102 35 119 3.41e-16 74.3
Msa0810080 AT2G41060.1 39.759 83 50 0 12 94 124 206 4.05e-16 78.6
Msa0810080 AT2G41060.3 39.759 83 50 0 12 94 124 206 4.05e-16 78.6
Msa0810080 AT2G41060.2 39.759 83 50 0 12 94 124 206 4.05e-16 78.6
Msa0810080 AT4G13850.2 40.909 88 48 2 16 102 35 119 4.20e-16 74.3
Msa0810080 AT4G13850.1 40.909 88 48 2 16 102 35 119 4.71e-16 74.3
Msa0810080 AT3G23830.2 38.636 88 50 2 16 102 35 119 6.19e-16 73.6
Msa0810080 AT3G23830.1 38.636 88 50 2 16 102 35 119 6.19e-16 73.6
Msa0810080 AT4G39260.4 45.161 62 34 0 17 78 7 68 7.55e-16 72.4
Msa0810080 AT3G07810.1 40.000 75 44 1 17 91 7 80 3.24e-15 75.9
Msa0810080 AT3G07810.2 40.000 75 44 1 17 91 7 80 3.33e-15 75.9
Msa0810080 AT2G21660.2 42.683 82 45 2 11 91 4 84 4.98e-15 71.6
Msa0810080 AT2G21660.1 42.683 82 45 2 11 91 4 84 7.11e-15 71.6
Msa0810080 AT4G13850.4 41.667 72 38 1 16 87 35 102 7.97e-15 70.1
Msa0810080 AT3G56860.9 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.11 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.8 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.5 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.7 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.2 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.6 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.10 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.3 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.1 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT3G56860.4 39.759 83 50 0 12 94 136 218 9.93e-15 74.3
Msa0810080 AT2G33410.1 35.870 92 57 2 17 108 7 96 2.39e-14 73.2
Msa0810080 AT2G19380.1 39.506 81 49 0 12 92 404 484 2.44e-14 73.6
Msa0810080 AT4G14300.1 36.709 79 46 1 12 86 2 80 4.63e-14 72.0
Msa0810080 AT4G14300.2 36.709 79 46 1 12 86 2 80 4.63e-14 72.0
Msa0810080 AT1G17640.2 41.667 72 41 1 17 88 67 137 7.80e-14 71.2
Msa0810080 AT1G17640.2 46.667 60 32 0 17 76 158 217 9.83e-11 62.0
Msa0810080 AT1G17640.1 41.667 72 41 1 17 88 67 137 7.80e-14 71.2
Msa0810080 AT1G17640.1 46.667 60 32 0 17 76 158 217 9.83e-11 62.0
Msa0810080 AT1G17640.3 41.667 72 41 1 17 88 67 137 7.80e-14 71.2
Msa0810080 AT1G17640.3 46.667 60 32 0 17 76 158 217 9.83e-11 62.0
Msa0810080 AT2G22100.1 29.032 186 113 7 6 178 153 332 1.88e-13 70.1
Msa0810080 AT3G26420.1 40.580 69 40 1 17 84 8 76 3.70e-12 65.1
Msa0810080 AT5G04280.1 35.294 102 60 2 16 115 7 104 1.03e-11 64.7
Msa0810080 AT1G74230.1 37.662 77 48 0 16 92 34 110 1.23e-11 64.3
Msa0810080 AT5G61030.2 33.333 78 48 1 16 93 40 113 1.61e-11 63.9
Msa0810080 AT5G61030.1 33.333 78 48 1 16 93 40 113 1.61e-11 63.9
Msa0810080 AT1G18630.1 41.429 70 40 1 16 84 36 105 1.70e-11 61.6
Msa0810080 AT5G59865.1 48.980 49 25 0 16 64 26 74 3.05e-11 59.7
Msa0810080 AT1G22910.4 65.217 46 14 1 62 105 8 53 3.10e-11 62.0
Msa0810080 AT3G13224.1 29.464 112 66 3 17 128 20 118 7.06e-11 61.2

Find 120 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTATGGCATTCCAAATT+TGG 0.131556 5_3:+38064926 Msa0810080:three_prime_UTR
TTGATTAATCAGTCCAAATT+TGG 0.158048 5_3:-38064939 None:intergenic
CAATACTATCAACAACTTTA+TGG 0.198535 5_3:+38062216 Msa0810080:CDS
CCACATTATCGATCACAATT+TGG 0.217645 5_3:+38057793 Msa0810080:CDS
GCTTCTCTTCCTTCTCTCTT+TGG 0.252025 5_3:+38057323 Msa0810080:five_prime_UTR
ATTTAGTGATTCTCTCCTAT+TGG 0.255682 5_3:+38057566 Msa0810080:five_prime_UTR
GGAGAAGGTTGCCTTATTAA+TGG 0.270286 5_3:-38062423 None:intergenic
ATGGGTTCACCATATTATTA+TGG 0.277771 5_3:+38062255 Msa0810080:CDS
CTTCCATCAATTACCGGGTT+TGG 0.284543 5_3:-38058105 None:intergenic
ACTTGAGGGTACCCGTATTC+AGG 0.296691 5_3:-38062029 None:intergenic
TTTAGTGATTCTCTCCTATT+GGG 0.315114 5_3:+38057567 Msa0810080:five_prime_UTR
CAAGCCCTTCTAGCTGATTC+TGG 0.316155 5_3:-38058075 None:intergenic
CACTTCAACAACCATTAATA+AGG 0.322262 5_3:+38062412 Msa0810080:CDS
AGCTTGTATGCGATGTGGTT+GGG 0.337761 5_3:-38062322 None:intergenic
GCTCTTCTTCCATCAATTAC+CGG 0.348588 5_3:-38058111 None:intergenic
GGACTGATTAATCAACTTCA+TGG 0.352176 5_3:+38064947 Msa0810080:three_prime_UTR
GATTATGCGGTATGGTTGTT+TGG 0.362901 5_3:-38057496 None:intergenic
GCTCCTTCCATTGGTGTAGT+AGG 0.367515 5_3:-38062366 None:intergenic
CCGTATGGTTGGTACATAAC+TGG 0.383017 5_3:-38058760 None:intergenic
CCGTACGCCGCTGCTGCTCC+TGG 0.386027 5_3:-38058685 None:intergenic
ATTGAATTTGAAGATTATAC+AGG 0.389867 5_3:-38064822 None:intergenic
ATAGAATAGCCATAATAATA+TGG 0.394438 5_3:-38062264 None:intergenic
ATGACTTGTGTTCTTCACTA+TGG 0.398359 5_3:+38064912 Msa0810080:three_prime_UTR
CCCACCTACACTCCTGAATA+CGG 0.401412 5_3:+38062017 Msa0810080:CDS
GTGATCCAGAATCAGCTAGA+AGG 0.404501 5_3:+38058070 Msa0810080:CDS
GGCAGGAGGGCCACCACAAA+TGG 0.409472 5_3:+38058717 Msa0810080:CDS
TGTAGTAGGGTAGTATAGAT+AGG 0.410340 5_3:-38062352 None:intergenic
AATTGTAACATTGCTTCTCT+TGG 0.414331 5_3:+38058135 Msa0810080:CDS
CCTCTTGGTGGTGATGGTCT+AGG 0.428010 5_3:-38058162 None:intergenic
GCAAACACTAATATGCTTGC+TGG 0.433743 5_3:-38057346 None:intergenic
GTTGCTCCTCCTGCCATTTG+TGG 0.434650 5_3:-38058730 None:intergenic
GATTATACAGGTTGAAACTA+AGG 0.440593 5_3:-38064810 None:intergenic
AGAGAAGGAAGAGAAGCTAA+TGG 0.442183 5_3:-38057317 None:intergenic
GATCCAAACCCGGTAATTGA+TGG 0.454852 5_3:+38058102 Msa0810080:CDS
TAATTACCTCTTGGTGGTGA+TGG 0.454939 5_3:-38058168 None:intergenic
TGGACCATCATCTTCAACAA+TGG 0.459048 5_3:+38062236 Msa0810080:CDS
ACCTCATCAGAGACAGCATC+TGG 0.463906 5_3:+38064717 Msa0810080:CDS
CTCTTCTTCCATCAATTACC+GGG 0.464479 5_3:-38058110 None:intergenic
ATTATCACTGATAAGAATAC+AGG 0.469048 5_3:+38057922 Msa0810080:CDS
AGGAGCACCAGGAGCAGCAG+CGG 0.469301 5_3:+38058678 Msa0810080:CDS
GGAGGGCCACCACAAATGGC+AGG 0.475742 5_3:+38058721 Msa0810080:CDS
GGACCATCATCTTCAACAAT+GGG 0.476751 5_3:+38062237 Msa0810080:CDS
GGTGTGGGGACAGGAGCACC+AGG 0.477832 5_3:+38058667 Msa0810080:CDS
AGCGGCGTACGGTGGTGTTC+CGG 0.480148 5_3:+38058696 Msa0810080:CDS
TACGGTGGTGTTCCGGCAGG+AGG 0.481590 5_3:+38058703 Msa0810080:CDS
GTTAATAATATTTGATGCAA+TGG 0.484841 5_3:+38057765 Msa0810080:exon
TGAAATTAATTACCTCTTGG+TGG 0.486134 5_3:-38058174 None:intergenic
TGCATCAAGTGTACTACTCT+TGG 0.489966 5_3:-38057709 None:intergenic
ATTTGTGGTGGCCCTCCTGC+CGG 0.491579 5_3:-38058715 None:intergenic
CAGCTTGTATGCGATGTGGT+TGG 0.492117 5_3:-38062323 None:intergenic
TATGTCCTCATTTCATCAGT+TGG 0.492209 5_3:-38057865 None:intergenic
TTAAGAGAAAAGAGAGAGAG+AGG 0.497921 5_3:-38057542 None:intergenic
GTGAAAGAAGCTCCTTCCAT+TGG 0.509833 5_3:-38062375 None:intergenic
TGGAGACACAACATTCACTA+AGG 0.512883 5_3:+38057813 Msa0810080:CDS
TATTGTGCTTGCTGAATCTG+TGG 0.514006 5_3:-38062198 None:intergenic
CCAGGAGCAGCAGCGGCGTA+CGG 0.514321 5_3:+38058685 Msa0810080:CDS
AAGAATACAGGAAAATCTAA+AGG 0.522577 5_3:+38057934 Msa0810080:CDS
GCTCCTCCTGCCATTTGTGG+TGG 0.523998 5_3:-38058727 None:intergenic
GCGTACGGTGGTGTTCCGGC+AGG 0.524319 5_3:+38058700 Msa0810080:CDS
GCAGGGAGGGGTACATATCA+AGG 0.525507 5_3:+38058640 Msa0810080:intron
CTCCTTCCATTGGTGTAGTA+GGG 0.529189 5_3:-38062365 None:intergenic
AGGGGTACATATCAAGGTGG+GGG 0.532228 5_3:+38058646 Msa0810080:CDS
ACAGGAAAATCTAAAGGATA+CGG 0.534361 5_3:+38057940 Msa0810080:CDS
GCTTGTATGCGATGTGGTTG+GGG 0.534607 5_3:-38062321 None:intergenic
CAACCACATCGCATACAAGC+TGG 0.537393 5_3:+38062324 Msa0810080:CDS
AAGAGGTGTTGTTGAATGGT+GGG 0.539075 5_3:+38057599 Msa0810080:five_prime_UTR
CCCGTATTCAGGAGTGTAGG+TGG 0.540062 5_3:-38062018 None:intergenic
CCAGTTATGTACCAACCATA+CGG 0.541049 5_3:+38058760 Msa0810080:CDS
ATTATACAGGTTGAAACTAA+GGG 0.541207 5_3:-38064809 None:intergenic
CTTATTAATGGTTGTTGAAG+TGG 0.545928 5_3:-38062411 None:intergenic
AAAGATTACCACTAGGAGAA+GGG 0.546590 5_3:-38062449 None:intergenic
GAGGGGTACATATCAAGGTG+GGG 0.550871 5_3:+38058645 Msa0810080:CDS
CCAAATTGTGATCGATAATG+TGG 0.553655 5_3:-38057793 None:intergenic
GAAAGATTACCACTAGGAGA+AGG 0.553884 5_3:-38062450 None:intergenic
GGGAGGGGTACATATCAAGG+TGG 0.557161 5_3:+38058643 Msa0810080:intron
CTAGGAGAAGGGGTAGGAGA+AGG 0.561216 5_3:-38062438 None:intergenic
TCGGAAAGATCAAATACTCA+AGG 0.564163 5_3:+38064753 Msa0810080:CDS
AGCTAACTTACCCGTATGGT+TGG 0.569031 5_3:-38058771 None:intergenic
AAGAAAGAGGTGTTGTTGAA+TGG 0.570970 5_3:+38057595 Msa0810080:five_prime_UTR
ATCTGGAGTAGTTATAACTT+CGG 0.572225 5_3:+38064734 Msa0810080:CDS
GGAGGGGTACATATCAAGGT+GGG 0.575240 5_3:+38058644 Msa0810080:CDS
ATTGTGCTTGCTGAATCTGT+GGG 0.576111 5_3:-38062197 None:intergenic
CCACCTACACTCCTGAATAC+GGG 0.576471 5_3:+38062018 Msa0810080:CDS
TGATCCAGAATCAGCTAGAA+GGG 0.577679 5_3:+38058071 Msa0810080:CDS
AAAGAGGTGTTGTTGAATGG+TGG 0.578458 5_3:+38057598 Msa0810080:five_prime_UTR
ATACTACCCTACTACACCAA+TGG 0.581425 5_3:+38062359 Msa0810080:CDS
TATGCAAGCAGCAGCACCAA+GGG 0.588236 5_3:+38062284 Msa0810080:CDS
GTAGGGTAGTATAGATAGGA+TGG 0.589808 5_3:-38062348 None:intergenic
CCGTATTCAGGAGTGTAGGT+GGG 0.589906 5_3:-38062017 None:intergenic
TCTCCTACCCCTTCTCCTAG+TGG 0.593229 5_3:+38062441 Msa0810080:CDS
AAGATTACCACTAGGAGAAG+GGG 0.593298 5_3:-38062448 None:intergenic
AGAGGTGTTGTTGAATGGTG+GGG 0.600498 5_3:+38057600 Msa0810080:five_prime_UTR
GGTGTTGAAAATGTACCCCT+TGG 0.604699 5_3:-38062300 None:intergenic
GCTTGCTGGCCAAAGAGAGA+AGG 0.606205 5_3:-38057332 None:intergenic
CAGTTATGTACCAACCATAC+GGG 0.607115 5_3:+38058761 Msa0810080:CDS
AATATGATGATTATGCGGTA+TGG 0.610233 5_3:-38057504 None:intergenic
AAACTCCAACTGATGAAATG+AGG 0.611186 5_3:+38057860 Msa0810080:CDS
ACATAGCTAACTTACCCGTA+TGG 0.611192 5_3:-38058775 None:intergenic
CGGAAAGATCAAATACTCAA+GGG 0.612666 5_3:+38064754 Msa0810080:CDS
GAACCCATTGTTGAAGATGA+TGG 0.613054 5_3:-38062240 None:intergenic
GGCTTGTGCTGATCCAAACC+CGG 0.613733 5_3:+38058092 Msa0810080:CDS
GGAGCAGCAGCGGCGTACGG+TGG 0.617356 5_3:+38058688 Msa0810080:CDS
GGGCCACCACAAATGGCAGG+AGG 0.622370 5_3:+38058724 Msa0810080:CDS
CGTATTCAGGAGTGTAGGTG+GGG 0.623905 5_3:-38062016 None:intergenic
TCCAGATGCTGTCTCTGATG+AGG 0.638137 5_3:-38064718 None:intergenic
ACGGTGGTGTTCCGGCAGGA+GGG 0.640460 5_3:+38058704 Msa0810080:CDS
TACCCTACTACACCAATGGA+AGG 0.640780 5_3:+38062363 Msa0810080:CDS
TTATACAGGTTGAAACTAAG+GGG 0.641425 5_3:-38064808 None:intergenic
CTATGCAAGCAGCAGCACCA+AGG 0.651575 5_3:+38062283 Msa0810080:CDS
GTACCCGTATTCAGGAGTGT+AGG 0.661197 5_3:-38062021 None:intergenic
AGTGAAGAACACAAGTCATG+TGG 0.666369 5_3:-38064908 None:intergenic
TACAGGTTGAAACTAAGGGG+GGG 0.672454 5_3:-38064805 None:intergenic
CCTAGACCATCACCACCAAG+AGG 0.681390 5_3:+38058162 Msa0810080:CDS
CTATTGGGAAAAGAAGAAAG+AGG 0.683433 5_3:+38057582 Msa0810080:five_prime_UTR
TTACCACTAGGAGAAGGGGT+AGG 0.689545 5_3:-38062444 None:intergenic
TATACAGGTTGAAACTAAGG+GGG 0.689755 5_3:-38064807 None:intergenic
TTATGAATATGATGATTATG+CGG 0.707070 5_3:-38057509 None:intergenic
GGTCCAGCTTGTATGCGATG+TGG 0.710376 5_3:-38062327 None:intergenic
ATACAGGTTGAAACTAAGGG+GGG 0.721574 5_3:-38064806 None:intergenic
ATGCAAGCAGCAGCACCAAG+GGG 0.733849 5_3:+38062285 Msa0810080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAACAAAAAATATTTAAAA+GGG - chr5_3:38057451-38057470 None:intergenic 10.0%
!! ACAAACAAAAAATATTTAAA+AGG - chr5_3:38057452-38057471 None:intergenic 10.0%
!!! ATATTTTTATGTAAATAGAT+CGG + chr5_3:38058449-38058468 Msa0810080:intron 10.0%
!!! ATTAATATATTTTAGAGTAA+GGG - chr5_3:38059082-38059101 None:intergenic 10.0%
!!! TAAATATTTCTTAAATTTTG+TGG + chr5_3:38059268-38059287 Msa0810080:intron 10.0%
!! AGAAAATATTAAAAATAGAA+AGG + chr5_3:38059451-38059470 Msa0810080:intron 10.0%
!! GAAAATATTAAAAATAGAAA+GGG + chr5_3:38059452-38059471 Msa0810080:intron 10.0%
!! AAAATATTAAAAATAGAAAG+GGG + chr5_3:38059453-38059472 Msa0810080:intron 10.0%
!!! AATATTTTTTATTCAAAAGA+CGG - chr5_3:38060040-38060059 None:intergenic 10.0%
!! AAAAAATAAAGAGATTATAA+TGG + chr5_3:38060574-38060593 Msa0810080:intron 10.0%
!! GAAAAAAAAATAAAAACAAT+GGG - chr5_3:38060620-38060639 None:intergenic 10.0%
!!! CATATATTTTTTTTAGTATT+AGG + chr5_3:38062129-38062148 Msa0810080:intron 10.0%
!! ATTAAATTAATATAAAGAAG+AGG - chr5_3:38062479-38062498 None:intergenic 10.0%
!! AACAATAGTATTAAAATAAA+TGG - chr5_3:38064612-38064631 None:intergenic 10.0%
!!! ATTATATCTTCAATTTTTTT+CGG + chr5_3:38064884-38064903 Msa0810080:three_prime_UTR 10.0%
!! TTCATAAATAAAAACATTAG+TGG - chr5_3:38058214-38058233 None:intergenic 15.0%
!!! TGAAATGATAAAGTATATTT+TGG + chr5_3:38058598-38058617 Msa0810080:intron 15.0%
!!! GATTAATATATTTTAGAGTA+AGG - chr5_3:38059083-38059102 None:intergenic 15.0%
!!! TTTCATTATTTTTTAGAGTA+AGG - chr5_3:38059121-38059140 None:intergenic 15.0%
!!! AAGTTATACATGAATTTTAT+AGG + chr5_3:38059420-38059439 Msa0810080:intron 15.0%
!! AAATATTAAAAATAGAAAGG+GGG + chr5_3:38059454-38059473 Msa0810080:intron 15.0%
!!! AAAAAATGATGATGATAAAT+AGG + chr5_3:38059565-38059584 Msa0810080:intron 15.0%
!!! ATGTTCATTTTTAAATTAGA+GGG - chr5_3:38060265-38060284 None:intergenic 15.0%
!!! AATGTTCATTTTTAAATTAG+AGG - chr5_3:38060266-38060285 None:intergenic 15.0%
!! TTAATTAGTGAAACAAATAA+GGG - chr5_3:38060294-38060313 None:intergenic 15.0%
!! CGAAAAAAAAATAAAAACAA+TGG - chr5_3:38060621-38060640 None:intergenic 15.0%
!! TAATTAACGTGTAAATAATT+TGG - chr5_3:38061209-38061228 None:intergenic 15.0%
!! TATCATATTATAAGTTAGTT+CGG + chr5_3:38061342-38061361 Msa0810080:intron 15.0%
!! ATTAAATTACAAAGCAAAAA+AGG - chr5_3:38061972-38061991 None:intergenic 15.0%
!! GTAAATTTGAAAAGATTAAA+GGG - chr5_3:38062509-38062528 None:intergenic 15.0%
!! AGTAAATTTGAAAAGATTAA+AGG - chr5_3:38062510-38062529 None:intergenic 15.0%
!! AAACATATAAATGTTACAAA+TGG - chr5_3:38063555-38063574 None:intergenic 15.0%
!!! TTTTTTTTTTTACGTAAACA+TGG - chr5_3:38064286-38064305 None:intergenic 15.0%
!!! AATATTAAATAGGTTGAAAT+TGG - chr5_3:38064540-38064559 None:intergenic 15.0%
!!! TAATTATTGTTTCTTATGAT+TGG + chr5_3:38064665-38064684 Msa0810080:intron 15.0%
!! TTATGAATATGATGATTATG+CGG - chr5_3:38057512-38057531 None:intergenic 20.0%
!! GTTAATAATATTTGATGCAA+TGG + chr5_3:38057765-38057784 Msa0810080:exon 20.0%
!! ATATCACCATAAAAATTAAG+TGG + chr5_3:38058409-38058428 Msa0810080:intron 20.0%
!!! AGAGATGAATTTCATTTTTT+TGG - chr5_3:38058533-38058552 None:intergenic 20.0%
!!! AATGATAAAGTATATTTTGG+TGG + chr5_3:38058601-38058620 Msa0810080:intron 20.0%
!! AGTTACTATTTACATAACAT+GGG - chr5_3:38058834-38058853 None:intergenic 20.0%
!! ATAATAATGTGTGTATTTCT+TGG + chr5_3:38059239-38059258 Msa0810080:intron 20.0%
!! TAGTAATGTGACTTTAATAA+TGG - chr5_3:38059362-38059381 None:intergenic 20.0%
!! AATATTAAAAATAGAAAGGG+GGG + chr5_3:38059455-38059474 Msa0810080:intron 20.0%
!! AAATATCAAAAACTAGAGAA+AGG + chr5_3:38059514-38059533 Msa0810080:intron 20.0%
!! AATCTTATTCGATATAATGT+CGG - chr5_3:38059999-38060018 None:intergenic 20.0%
!!! ATTTTATACCTTTTTAATGC+AGG - chr5_3:38060147-38060166 None:intergenic 20.0%
!!! TGTTCATTTTTAAATTAGAG+GGG - chr5_3:38060264-38060283 None:intergenic 20.0%
!! GTTAATTAGTGAAACAAATA+AGG - chr5_3:38060295-38060314 None:intergenic 20.0%
!!! AAATTCCTTTTATACATTAC+AGG + chr5_3:38060525-38060544 Msa0810080:intron 20.0%
!!! AATTCCTTTTATACATTACA+GGG + chr5_3:38060526-38060545 Msa0810080:intron 20.0%
!!! AAAACAACTATCAACATTTT+AGG + chr5_3:38061015-38061034 Msa0810080:intron 20.0%
!!! AGTGTTTTTTTAAAACTAGA+GGG + chr5_3:38061066-38061085 Msa0810080:intron 20.0%
!! CAATACATATAAAAATAGCT+TGG + chr5_3:38061398-38061417 Msa0810080:intron 20.0%
!! ATAAAGTGCATTAAAAAGAA+TGG - chr5_3:38061567-38061586 None:intergenic 20.0%
!! TCATAATCAATTCAATCTTT+GGG + chr5_3:38061674-38061693 Msa0810080:intron 20.0%
!!! TAGTACAATTTCTTTTTTTG+TGG - chr5_3:38061724-38061743 None:intergenic 20.0%
!! ATTTCACATTGATCAATTTA+AGG + chr5_3:38061768-38061787 Msa0810080:intron 20.0%
!!! AATTTCTTATCAATAGCTTT+TGG - chr5_3:38061808-38061827 None:intergenic 20.0%
!! GTATGATCTTAAATGATTAT+GGG - chr5_3:38062067-38062086 None:intergenic 20.0%
!! TGTATGATCTTAAATGATTA+TGG - chr5_3:38062068-38062087 None:intergenic 20.0%
!! AATTTGTAATTTATGAGTAC+AGG + chr5_3:38062161-38062180 Msa0810080:intron 20.0%
!! ATAGAATAGCCATAATAATA+TGG - chr5_3:38062267-38062286 None:intergenic 20.0%
!!! TTAACTACCATAGAATTTTT+TGG + chr5_3:38062789-38062808 Msa0810080:intron 20.0%
!!! TTATGAGATAATTTTTCACA+TGG + chr5_3:38063433-38063452 Msa0810080:intron 20.0%
!!! TATGAGATAATTTTTCACAT+GGG + chr5_3:38063434-38063453 Msa0810080:intron 20.0%
!!! TTTATTTGTGAAGAAGATTT+TGG + chr5_3:38063908-38063927 Msa0810080:intron 20.0%
!! ATAGTAGTTAAGAAAAGAAA+AGG - chr5_3:38064003-38064022 None:intergenic 20.0%
!!! AACTACAAATTTTGATGTTT+TGG + chr5_3:38064133-38064152 Msa0810080:intron 20.0%
!!! ACTACAAATTTTGATGTTTT+GGG + chr5_3:38064134-38064153 Msa0810080:intron 20.0%
!!! TTGTTTATCTTTGAGTTTAA+AGG - chr5_3:38064253-38064272 None:intergenic 20.0%
!! TCAAATAAACCAATTTAAAC+AGG + chr5_3:38064507-38064526 Msa0810080:intron 20.0%
!! ATTGAATTTGAAGATTATAC+AGG - chr5_3:38064825-38064844 None:intergenic 20.0%
!!! AGGACATATTTTGAACAATT+TGG + chr5_3:38057880-38057899 Msa0810080:CDS 25.0%
! ATTATCACTGATAAGAATAC+AGG + chr5_3:38057922-38057941 Msa0810080:CDS 25.0%
! AAGAATACAGGAAAATCTAA+AGG + chr5_3:38057934-38057953 Msa0810080:CDS 25.0%
! TAAACATTGAATTAATGTGC+AGG + chr5_3:38058038-38058057 Msa0810080:intron 25.0%
! CAATGAAATTAATTACCTCT+TGG - chr5_3:38058180-38058199 None:intergenic 25.0%
! TCAAATAGATCGATTATTGT+AGG - chr5_3:38058273-38058292 None:intergenic 25.0%
! GAGTTACTATTTACATAACA+TGG - chr5_3:38058835-38058854 None:intergenic 25.0%
! CAGTTATCTAATTAATACCA+TGG - chr5_3:38058882-38058901 None:intergenic 25.0%
! ATGATATGAAATGATATGTG+AGG - chr5_3:38058991-38059010 None:intergenic 25.0%
! CATGATGATTTAAAAGAGTA+AGG - chr5_3:38059053-38059072 None:intergenic 25.0%
!! TTTAGAGTAAGGTTACATAA+GGG - chr5_3:38059110-38059129 None:intergenic 25.0%
!!! TTTTAGAGTAAGGTTACATA+AGG - chr5_3:38059111-38059130 None:intergenic 25.0%
!!! ATGATGATGTGTTTGTTTTA+GGG + chr5_3:38059211-38059230 Msa0810080:intron 25.0%
!!! AATTTTGTGGAATTTGAGTT+TGG + chr5_3:38059281-38059300 Msa0810080:intron 25.0%
!!! GATTCATAAGCTTATTTTCA+GGG - chr5_3:38059317-38059336 None:intergenic 25.0%
!!! TGATTCATAAGCTTATTTTC+AGG - chr5_3:38059318-38059337 None:intergenic 25.0%
! TCAATAAAAAATGTAGTCCA+CGG + chr5_3:38059622-38059641 Msa0810080:intron 25.0%
! TCAAATTAACCTACCTATAT+AGG - chr5_3:38059665-38059684 None:intergenic 25.0%
! GACATTATATCGAATAAGAT+TGG + chr5_3:38059998-38060017 Msa0810080:intron 25.0%
! AAATTTCACAGTTGTTCTTA+AGG + chr5_3:38060085-38060104 Msa0810080:intron 25.0%
! AATTTCACAGTTGTTCTTAA+GGG + chr5_3:38060086-38060105 Msa0810080:intron 25.0%
!! ACATTTTACACATTACAAGT+TGG + chr5_3:38060190-38060209 Msa0810080:intron 25.0%
!! CATTTTACACATTACAAGTT+GGG + chr5_3:38060191-38060210 Msa0810080:intron 25.0%
!!! GTTCATTTTTAAATTAGAGG+GGG - chr5_3:38060263-38060282 None:intergenic 25.0%
!! ATTCCTTTTATACATTACAG+GGG + chr5_3:38060527-38060546 Msa0810080:intron 25.0%
! ATTTAATGTAATGGCGTAAT+GGG - chr5_3:38060668-38060687 None:intergenic 25.0%
! CAACTTATAGTTCAATTCAA+TGG + chr5_3:38060746-38060765 Msa0810080:intron 25.0%
!!! GAGTGTTTTTTTAAAACTAG+AGG + chr5_3:38061065-38061084 Msa0810080:intron 25.0%
!!! GTGTTTTTTTAAAACTAGAG+GGG + chr5_3:38061067-38061086 Msa0810080:intron 25.0%
!!! TGTTTTTTTAAAACTAGAGG+GGG + chr5_3:38061068-38061087 Msa0810080:intron 25.0%
!!! GTATTGTGTATTGATTATGT+TGG - chr5_3:38061384-38061403 None:intergenic 25.0%
! ACATTATTAACTTTCTTGCA+TGG - chr5_3:38061437-38061456 None:intergenic 25.0%
! ACATATATATGAAGTCTCAT+GGG - chr5_3:38061500-38061519 None:intergenic 25.0%
! GTCATAATCAATTCAATCTT+TGG + chr5_3:38061673-38061692 Msa0810080:intron 25.0%
!!! CAATTTCTTTTTTTGTGGTA+TGG - chr5_3:38061719-38061738 None:intergenic 25.0%
!!! TATAGTGAAGTTAATTTGTG+AGG - chr5_3:38061860-38061879 None:intergenic 25.0%
! CAATACTATCAACAACTTTA+TGG + chr5_3:38062216-38062235 Msa0810080:CDS 25.0%
! AATTTGAAAAGATTAAAGGG+TGG - chr5_3:38062506-38062525 None:intergenic 25.0%
!! AGTGTCAATTCAACATTTTA+TGG - chr5_3:38062533-38062552 None:intergenic 25.0%
! TCAAATGTTAGATATACCAA+AGG - chr5_3:38062565-38062584 None:intergenic 25.0%
!!! GTTTTTTAGTTATAAGTCAG+TGG - chr5_3:38062760-38062779 None:intergenic 25.0%
! ACTTATAACTAAAAAACCGA+CGG + chr5_3:38062763-38062782 Msa0810080:intron 25.0%
! GAAATGACCAAAAAATTCTA+TGG - chr5_3:38062799-38062818 None:intergenic 25.0%
!!! TATGATTTTGCTATAACATG+TGG + chr5_3:38063056-38063075 Msa0810080:intron 25.0%
! TTAACCGTATTATGTATGTA+TGG + chr5_3:38063139-38063158 Msa0810080:intron 25.0%
! TAACCGTATTATGTATGTAT+GGG + chr5_3:38063140-38063159 Msa0810080:intron 25.0%
! AAAATGAGAAAATGCAAAGT+GGG - chr5_3:38063291-38063310 None:intergenic 25.0%
! TAAAATGAGAAAATGCAAAG+TGG - chr5_3:38063292-38063311 None:intergenic 25.0%
! ATGAAATGAATTTGTAGGTT+GGG - chr5_3:38063322-38063341 None:intergenic 25.0%
! AGTACATGAAATGAATTTGT+AGG - chr5_3:38063327-38063346 None:intergenic 25.0%
!!! ATTTTCTCTTTGACTTCATT+AGG + chr5_3:38063399-38063418 Msa0810080:intron 25.0%
!!! TTTTCTCTTTGACTTCATTA+GGG + chr5_3:38063400-38063419 Msa0810080:intron 25.0%
! AAAAAATGTTCTTAAGACAC+TGG - chr5_3:38063616-38063635 None:intergenic 25.0%
! CCTTGAATAATAAGTTTCTA+TGG - chr5_3:38063714-38063733 None:intergenic 25.0%
! CCATAGAAACTTATTATTCA+AGG + chr5_3:38063711-38063730 Msa0810080:intron 25.0%
!!! AGCACTTTCAATTTTGTTAT+TGG + chr5_3:38063763-38063782 Msa0810080:intron 25.0%
!! TTTTACGAAAATGCAAATTC+TGG + chr5_3:38063936-38063955 Msa0810080:intron 25.0%
! TAACTACTATTATCATGTGA+AGG + chr5_3:38064013-38064032 Msa0810080:intron 25.0%
!!! CTACAAATTTTGATGTTTTG+GGG + chr5_3:38064135-38064154 Msa0810080:intron 25.0%
! ACAACTTATAGACATATCAT+CGG + chr5_3:38064434-38064453 Msa0810080:intron 25.0%
! ATTTATATAAGCTCTCAATC+AGG + chr5_3:38064459-38064478 Msa0810080:intron 25.0%
! AAATATGTCAAACAAAGAAG+AGG - chr5_3:38064644-38064663 None:intergenic 25.0%
!! ATTATACAGGTTGAAACTAA+GGG - chr5_3:38064812-38064831 None:intergenic 25.0%
! TTGATTAATCAGTCCAAATT+TGG - chr5_3:38064942-38064961 None:intergenic 25.0%
AATATGATGATTATGCGGTA+TGG - chr5_3:38057507-38057526 None:intergenic 30.0%
ATTTAGTGATTCTCTCCTAT+TGG + chr5_3:38057566-38057585 Msa0810080:five_prime_UTR 30.0%
TTTAGTGATTCTCTCCTATT+GGG + chr5_3:38057567-38057586 Msa0810080:five_prime_UTR 30.0%
! ACATTCACTAAGGTTTTTGT+TGG + chr5_3:38057823-38057842 Msa0810080:CDS 30.0%
ACAGGAAAATCTAAAGGATA+CGG + chr5_3:38057940-38057959 Msa0810080:CDS 30.0%
AATTGTAACATTGCTTCTCT+TGG + chr5_3:38058135-38058154 Msa0810080:CDS 30.0%
TGAAATTAATTACCTCTTGG+TGG - chr5_3:38058177-38058196 None:intergenic 30.0%
ATAGATCGATTATTGTAGGA+CGG - chr5_3:38058269-38058288 None:intergenic 30.0%
! CGATGACCACTTAATTTTTA+TGG - chr5_3:38058418-38058437 None:intergenic 30.0%
! AATTAAGTGGTCATCGTTTT+AGG + chr5_3:38058422-38058441 Msa0810080:intron 30.0%
TATGTGGTCATTTATTACTG+TGG + chr5_3:38058793-38058812 Msa0810080:intron 30.0%
TTAGAGTAAGGTTACATAAG+GGG - chr5_3:38059109-38059128 None:intergenic 30.0%
GCAACTTCTTATAGTACATA+TGG - chr5_3:38059182-38059201 None:intergenic 30.0%
!! CATGATGATGTGTTTGTTTT+AGG + chr5_3:38059210-38059229 Msa0810080:intron 30.0%
AGTCACATTACTATCTAATG+TGG + chr5_3:38059369-38059388 Msa0810080:intron 30.0%
GTCACATTACTATCTAATGT+GGG + chr5_3:38059370-38059389 Msa0810080:intron 30.0%
AAAAACTAGAGAAAGGTCTA+AGG + chr5_3:38059521-38059540 Msa0810080:intron 30.0%
AATAGTAGATATGTAGTCCA+TGG + chr5_3:38059594-38059613 Msa0810080:intron 30.0%
!!! ATTTTTTATTGACCATGCCA+TGG - chr5_3:38059614-38059633 None:intergenic 30.0%
!! ATACAAAAGTACCAAGAGAT+GGG - chr5_3:38059718-38059737 None:intergenic 30.0%
TAAGACAACAATAACATTGC+TGG - chr5_3:38059768-38059787 None:intergenic 30.0%
TGAGAACTGTATAAATTGCA+TGG + chr5_3:38059788-38059807 Msa0810080:intron 30.0%
TAGGCTAAACTTTCATAATG+TGG + chr5_3:38059926-38059945 Msa0810080:intron 30.0%
TTTCATAATGTGGTGAATCT+AGG + chr5_3:38059936-38059955 Msa0810080:intron 30.0%
ATAATGTCGGATACTAAATG+TGG - chr5_3:38059986-38060005 None:intergenic 30.0%
! TCTCTTTTGATCAAAAGACT+AGG - chr5_3:38060066-38060085 None:intergenic 30.0%
CCTTAGAATGGCATAATATT+GGG + chr5_3:38060109-38060128 Msa0810080:intron 30.0%
CTTAGAATGGCATAATATTG+GGG + chr5_3:38060110-38060129 Msa0810080:intron 30.0%
TTAGAATGGCATAATATTGG+GGG + chr5_3:38060111-38060130 Msa0810080:intron 30.0%
ATACAAGTCCTGCATTAAAA+AGG + chr5_3:38060136-38060155 Msa0810080:intron 30.0%
! TGTTGTTTATAGAAACCTCA+GGG - chr5_3:38060234-38060253 None:intergenic 30.0%
ATTAGTGAAACAAATAAGGG+AGG - chr5_3:38060291-38060310 None:intergenic 30.0%
AGAAGTTAACTGGATACTAA+CGG - chr5_3:38060342-38060361 None:intergenic 30.0%
!!! TAGTTTTGTCTTTTTGCTTC+AGG - chr5_3:38060504-38060523 None:intergenic 30.0%
GACTGAATAATGTACAAACT+GGG + chr5_3:38060549-38060568 Msa0810080:intron 30.0%
TTTAATGTAATGGCGTAATG+GGG - chr5_3:38060667-38060686 None:intergenic 30.0%
GATTTAATGTAATGGCGTAA+TGG - chr5_3:38060669-38060688 None:intergenic 30.0%
ACATGAAGAGAAATTAGGAT+AGG - chr5_3:38060725-38060744 None:intergenic 30.0%
GTTGAACATGAAGAGAAATT+AGG - chr5_3:38060730-38060749 None:intergenic 30.0%
!! AATTGATTCGAAATTGACGA+CGG + chr5_3:38060878-38060897 Msa0810080:intron 30.0%
GATAACAGAGTTAGATTAGA+GGG + chr5_3:38061037-38061056 Msa0810080:intron 30.0%
ATAACAGAGTTAGATTAGAG+GGG + chr5_3:38061038-38061057 Msa0810080:intron 30.0%
! TGTTGTTTAAACAAACCTCA+GGG + chr5_3:38061097-38061116 Msa0810080:intron 30.0%
TCCAATAATGTTAGTCCTAA+GGG + chr5_3:38061231-38061250 Msa0810080:intron 30.0%
AAGTTAGTTCGGTAAGAATA+AGG + chr5_3:38061353-38061372 Msa0810080:intron 30.0%
CACATATATATGAAGTCTCA+TGG - chr5_3:38061501-38061520 None:intergenic 30.0%
GAGATGACATTATAATGGTA+TGG - chr5_3:38061542-38061561 None:intergenic 30.0%
ATTCATGAATCATAATGCCT+TGG + chr5_3:38061618-38061637 Msa0810080:intron 30.0%
! ATGCTTCTAATTTTTCTCAC+CGG + chr5_3:38061829-38061848 Msa0810080:intron 30.0%
AGAGAAGCAACAACTTAAAA+TGG - chr5_3:38061910-38061929 None:intergenic 30.0%
GTTGAATGCAGTAATGTATT+TGG - chr5_3:38061939-38061958 None:intergenic 30.0%
GATCTTAAATGATTATGGGA+GGG - chr5_3:38062063-38062082 None:intergenic 30.0%
TGATCTTAAATGATTATGGG+AGG - chr5_3:38062064-38062083 None:intergenic 30.0%
ATGGGTTCACCATATTATTA+TGG + chr5_3:38062255-38062274 Msa0810080:CDS 30.0%
CTTATTAATGGTTGTTGAAG+TGG - chr5_3:38062414-38062433 None:intergenic 30.0%
CACTTCAACAACCATTAATA+AGG + chr5_3:38062412-38062431 Msa0810080:CDS 30.0%
TGACACTAATATTCAACCTT+TGG + chr5_3:38062546-38062565 Msa0810080:intron 30.0%
! TGCTAAGTCTATGTGTTATT+AGG - chr5_3:38062726-38062745 None:intergenic 30.0%
AAGATGTTCATGATAACACA+TGG - chr5_3:38062821-38062840 None:intergenic 30.0%
TAGTGTATAACGTACAATGT+AGG + chr5_3:38062916-38062935 Msa0810080:intron 30.0%
ATGAATAGAGAGAATTAGAG+TGG + chr5_3:38062958-38062977 Msa0810080:intron 30.0%
TGAATAGAGAGAATTAGAGT+GGG + chr5_3:38062959-38062978 Msa0810080:intron 30.0%
TGACCCATACATACATAATA+CGG - chr5_3:38063146-38063165 None:intergenic 30.0%
AAATTAACAGTGAATGCATG+TGG + chr5_3:38063197-38063216 Msa0810080:intron 30.0%
! CTTTAAAGATCCAGTCAAAA+TGG + chr5_3:38063244-38063263 Msa0810080:intron 30.0%
CATGAAATGAATTTGTAGGT+TGG - chr5_3:38063323-38063342 None:intergenic 30.0%
TACGACATAAGTTCAATTTC+AGG - chr5_3:38063492-38063511 None:intergenic 30.0%
! ACAAATGGTGTTAAGAGATT+CGG - chr5_3:38063540-38063559 None:intergenic 30.0%
AGAACTAGATTAACCTCTAA+TGG + chr5_3:38063829-38063848 Msa0810080:intron 30.0%
TAATAGAGTGTGAGATGATA+TGG - chr5_3:38064107-38064126 None:intergenic 30.0%
TGCAATTTGGATGTCTTAAT+TGG - chr5_3:38064172-38064191 None:intergenic 30.0%
! ATCTGGAGTAGTTATAACTT+CGG + chr5_3:38064734-38064753 Msa0810080:CDS 30.0%
! TTATACAGGTTGAAACTAAG+GGG - chr5_3:38064811-38064830 None:intergenic 30.0%
! GATTATACAGGTTGAAACTA+AGG - chr5_3:38064813-38064832 None:intergenic 30.0%
TTAAGAGAAAAGAGAGAGAG+AGG - chr5_3:38057545-38057564 None:intergenic 35.0%
! CTCTTTCTTCTTTTCCCAAT+AGG - chr5_3:38057584-38057603 None:intergenic 35.0%
CTATTGGGAAAAGAAGAAAG+AGG + chr5_3:38057582-38057601 Msa0810080:five_prime_UTR 35.0%
!! AAGAAAGAGGTGTTGTTGAA+TGG + chr5_3:38057595-38057614 Msa0810080:five_prime_UTR 35.0%
TGGGGTTGAACAACAAAAAA+GGG + chr5_3:38057618-38057637 Msa0810080:five_prime_UTR 35.0%
CCAAATTGTGATCGATAATG+TGG - chr5_3:38057796-38057815 None:intergenic 35.0%
CCACATTATCGATCACAATT+TGG + chr5_3:38057793-38057812 Msa0810080:CDS 35.0%
! TTCACTAAGGTTTTTGTTGG+AGG + chr5_3:38057826-38057845 Msa0810080:CDS 35.0%
AAACTCCAACTGATGAAATG+AGG + chr5_3:38057860-38057879 Msa0810080:CDS 35.0%
TATGTCCTCATTTCATCAGT+TGG - chr5_3:38057868-38057887 None:intergenic 35.0%
TAGATCGATTATTGTAGGAC+GGG - chr5_3:38058268-38058287 None:intergenic 35.0%
GATTGTAATGTAATGCTGCA+GGG + chr5_3:38058623-38058642 Msa0810080:intron 35.0%
AGTAACTCATAGTCAGTCAA+AGG + chr5_3:38058847-38058866 Msa0810080:intron 35.0%
GTAACTCATAGTCAGTCAAA+GGG + chr5_3:38058848-38058867 Msa0810080:intron 35.0%
TAACTCATAGTCAGTCAAAG+GGG + chr5_3:38058849-38058868 Msa0810080:intron 35.0%
ACAATGAGACCTACTGTAAT+TGG - chr5_3:38058956-38058975 None:intergenic 35.0%
TAGAGTAAGGTTACATAAGG+GGG - chr5_3:38059108-38059127 None:intergenic 35.0%
TGGATATGATCATCTATGCA+TGG - chr5_3:38059162-38059181 None:intergenic 35.0%
!! TACAAAAGTACCAAGAGATG+GGG - chr5_3:38059717-38059736 None:intergenic 35.0%
!! CATACAAAAGTACCAAGAGA+TGG - chr5_3:38059719-38059738 None:intergenic 35.0%
AGAGTTGAGTCTAGCATATT+AGG + chr5_3:38059907-38059926 Msa0810080:intron 35.0%
GCCTTAGAATGGCATAATAT+TGG + chr5_3:38060108-38060127 Msa0810080:intron 35.0%
CCCAATATTATGCCATTCTA+AGG - chr5_3:38060112-38060131 None:intergenic 35.0%
GTTGTTTATAGAAACCTCAG+GGG - chr5_3:38060233-38060252 None:intergenic 35.0%
!! GTGTTGTTTATAGAAACCTC+AGG - chr5_3:38060235-38060254 None:intergenic 35.0%
AGTCCCCTGTAATGTATAAA+AGG - chr5_3:38060533-38060552 None:intergenic 35.0%
GGACTGAATAATGTACAAAC+TGG + chr5_3:38060548-38060567 Msa0810080:intron 35.0%
GGAGGTTGGATTTAATGTAA+TGG - chr5_3:38060677-38060696 None:intergenic 35.0%
ACATTAAATCCAACCTCCAA+TGG + chr5_3:38060679-38060698 Msa0810080:intron 35.0%
GAAAAGTTTGTGAGTTCCAT+TGG - chr5_3:38060698-38060717 None:intergenic 35.0%
TGAAGAGAAATTAGGATAGG+TGG - chr5_3:38060722-38060741 None:intergenic 35.0%
AGCATTTGGATTCCTCAAAA+AGG + chr5_3:38060845-38060864 Msa0810080:intron 35.0%
! TTTCACCAATGTCCTTTTTG+AGG - chr5_3:38060860-38060879 None:intergenic 35.0%
! TGGAGCTTTAATTTACACAC+TGG + chr5_3:38060944-38060963 Msa0810080:intron 35.0%
GGATAACAGAGTTAGATTAG+AGG + chr5_3:38061036-38061055 Msa0810080:intron 35.0%
!! GTGTTGTTTAAACAAACCTC+AGG + chr5_3:38061096-38061115 Msa0810080:intron 35.0%
GTTGTTTAAACAAACCTCAG+GGG + chr5_3:38061098-38061117 Msa0810080:intron 35.0%
CTTACGACACAAACTTGTAA+GGG - chr5_3:38061140-38061159 None:intergenic 35.0%
ACTTACGACACAAACTTGTA+AGG - chr5_3:38061141-38061160 None:intergenic 35.0%
GTCCAATAATGTTAGTCCTA+AGG + chr5_3:38061230-38061249 Msa0810080:intron 35.0%
CCAATAATGTTAGTCCTAAG+GGG + chr5_3:38061232-38061251 Msa0810080:intron 35.0%
!!! TTTTTTCCAATAGACCCCTT+AGG - chr5_3:38061249-38061268 None:intergenic 35.0%
TGGTCGAGATGACATTATAA+TGG - chr5_3:38061547-38061566 None:intergenic 35.0%
TAAACCCATCAAGCAGAAAA+TGG - chr5_3:38061595-38061614 None:intergenic 35.0%
ATGCCTTGGTTACATGAAAA+AGG + chr5_3:38061632-38061651 Msa0810080:intron 35.0%
ATTATGACTCACTTCAGTGA+TGG - chr5_3:38061661-38061680 None:intergenic 35.0%
!! GTTAATTTGTGAGGTGTTTC+CGG - chr5_3:38061851-38061870 None:intergenic 35.0%
ATGGTAGAGTTCTATTGTTG+TGG - chr5_3:38061891-38061910 None:intergenic 35.0%
TAGCTGCAAACAAAGATGAA+AGG - chr5_3:38061996-38062015 None:intergenic 35.0%
TGTAGTAGGGTAGTATAGAT+AGG - chr5_3:38062355-38062374 None:intergenic 35.0%
AAAGATTACCACTAGGAGAA+GGG - chr5_3:38062452-38062471 None:intergenic 35.0%
AGGATAGAAAGATTACCACT+AGG - chr5_3:38062459-38062478 None:intergenic 35.0%
AAGTAAGCGTCATTTGTGAT+TGG + chr5_3:38062851-38062870 Msa0810080:intron 35.0%
GAATAGAGAGAATTAGAGTG+GGG + chr5_3:38062960-38062979 Msa0810080:intron 35.0%
!! AAAGCAAAGACCATTTTGAC+TGG - chr5_3:38063257-38063276 None:intergenic 35.0%
AGTGCTAATAAGTTGTCCTA+GGG - chr5_3:38063749-38063768 None:intergenic 35.0%
AAGTGCTAATAAGTTGTCCT+AGG - chr5_3:38063750-38063769 None:intergenic 35.0%
GAATTTGTATTCACAGAAGG+AGG - chr5_3:38063860-38063879 None:intergenic 35.0%
GCAGAATTTGTATTCACAGA+AGG - chr5_3:38063863-38063882 None:intergenic 35.0%
AGGTGAGTCAAAAAGGAAAT+AGG + chr5_3:38064033-38064052 Msa0810080:intron 35.0%
AGATCATATCGACAAGTTCA+TGG - chr5_3:38064195-38064214 None:intergenic 35.0%
GGACTTTCACCTGTTTAAAT+TGG - chr5_3:38064519-38064538 None:intergenic 35.0%
TCGGAAAGATCAAATACTCA+AGG + chr5_3:38064753-38064772 Msa0810080:CDS 35.0%
CGGAAAGATCAAATACTCAA+GGG + chr5_3:38064754-38064773 Msa0810080:CDS 35.0%
! TATACAGGTTGAAACTAAGG+GGG - chr5_3:38064810-38064829 None:intergenic 35.0%
! ATGACTTGTGTTCTTCACTA+TGG + chr5_3:38064912-38064931 Msa0810080:three_prime_UTR 35.0%
TCACTATGGCATTCCAAATT+TGG + chr5_3:38064926-38064945 Msa0810080:three_prime_UTR 35.0%
GGACTGATTAATCAACTTCA+TGG + chr5_3:38064947-38064966 Msa0810080:three_prime_UTR 35.0%
AGAGAAGGAAGAGAAGCTAA+TGG - chr5_3:38057320-38057339 None:intergenic 40.0%
GCAAACACTAATATGCTTGC+TGG - chr5_3:38057349-38057368 None:intergenic 40.0%
GATTATGCGGTATGGTTGTT+TGG - chr5_3:38057499-38057518 None:intergenic 40.0%
!! AAAGAGGTGTTGTTGAATGG+TGG + chr5_3:38057598-38057617 Msa0810080:five_prime_UTR 40.0%
!! AAGAGGTGTTGTTGAATGGT+GGG + chr5_3:38057599-38057618 Msa0810080:five_prime_UTR 40.0%
GTGGGGTTGAACAACAAAAA+AGG + chr5_3:38057617-38057636 Msa0810080:five_prime_UTR 40.0%
TGCATCAAGTGTACTACTCT+TGG - chr5_3:38057712-38057731 None:intergenic 40.0%
TGGAGACACAACATTCACTA+AGG + chr5_3:38057813-38057832 Msa0810080:CDS 40.0%
!!! TTTTTGTTGGAGGACTAGCT+TGG + chr5_3:38057836-38057855 Msa0810080:CDS 40.0%
!!! TTTTGTTGGAGGACTAGCTT+GGG + chr5_3:38057837-38057856 Msa0810080:CDS 40.0%
TGATCCAGAATCAGCTAGAA+GGG + chr5_3:38058071-38058090 Msa0810080:CDS 40.0%
CTCTTCTTCCATCAATTACC+GGG - chr5_3:38058113-38058132 None:intergenic 40.0%
GCTCTTCTTCCATCAATTAC+CGG - chr5_3:38058114-38058133 None:intergenic 40.0%
!! TAATTACCTCTTGGTGGTGA+TGG - chr5_3:38058171-38058190 None:intergenic 40.0%
GGATTGTAATGTAATGCTGC+AGG + chr5_3:38058622-38058641 Msa0810080:intron 40.0%
CCAGTTATGTACCAACCATA+CGG + chr5_3:38058760-38058779 Msa0810080:CDS 40.0%
CAGTTATGTACCAACCATAC+GGG + chr5_3:38058761-38058780 Msa0810080:CDS 40.0%
ACATAGCTAACTTACCCGTA+TGG - chr5_3:38058778-38058797 None:intergenic 40.0%
ATACGGGTAAGTTAGCTATG+TGG + chr5_3:38058777-38058796 Msa0810080:intron 40.0%
TGAGACCTACTGTAATTGGA+GGG - chr5_3:38058952-38058971 None:intergenic 40.0%
ATGAGACCTACTGTAATTGG+AGG - chr5_3:38058953-38058972 None:intergenic 40.0%
GAGTAAGGCAGAACAAAGTT+TGG - chr5_3:38059038-38059057 None:intergenic 40.0%
AGAGTAAGGTTACATAAGGG+GGG - chr5_3:38059107-38059126 None:intergenic 40.0%
!!! GCTTATTTTCAGGGTTAGCT+AGG - chr5_3:38059308-38059327 None:intergenic 40.0%
TAGATATGTAGTCCATGGCA+TGG + chr5_3:38059599-38059618 Msa0810080:intron 40.0%
CACATGTAGTGGTCCTATAT+AGG + chr5_3:38059649-38059668 Msa0810080:intron 40.0%
TGTAGTGGTCCTATATAGGT+AGG + chr5_3:38059653-38059672 Msa0810080:intron 40.0%
TGATAAAATCCCCCATCTCT+TGG + chr5_3:38059704-38059723 Msa0810080:intron 40.0%
!! ACAAAAGTACCAAGAGATGG+GGG - chr5_3:38059716-38059735 None:intergenic 40.0%
CTGGTGAGAAAATGACTTGA+TGG - chr5_3:38059749-38059768 None:intergenic 40.0%
ATGCTAGACTCAACTCTTGT+AGG - chr5_3:38059904-38059923 None:intergenic 40.0%
GGTGAATCTAGGTTCAATCT+CGG + chr5_3:38059947-38059966 Msa0810080:intron 40.0%
TGTTCTTAAGGGCCTTAGAA+TGG + chr5_3:38060097-38060116 Msa0810080:intron 40.0%
CTAACGGCGTTAACATACAA+GGG - chr5_3:38060326-38060345 None:intergenic 40.0%
ACTAACGGCGTTAACATACA+AGG - chr5_3:38060327-38060346 None:intergenic 40.0%
ACTGCAGCAAAGAAGTTAAC+TGG - chr5_3:38060352-38060371 None:intergenic 40.0%
AGTTAACTTCTTTGCTGCAG+TGG + chr5_3:38060351-38060370 Msa0810080:intron 40.0%
AAGTTTGTGAGTTCCATTGG+AGG - chr5_3:38060695-38060714 None:intergenic 40.0%
! CAATTCCAACTCAGAGCATT+TGG + chr5_3:38060831-38060850 Msa0810080:intron 40.0%
GGATTCCTCAAAAAGGACAT+TGG + chr5_3:38060852-38060871 Msa0810080:intron 40.0%
GATTGCACGTTGTGCTATAA+TGG + chr5_3:38060972-38060991 Msa0810080:intron 40.0%
CCCCTTAGGACTAACATTAT+TGG - chr5_3:38061235-38061254 None:intergenic 40.0%
! TCCTTCCATTTTCTGCTTGA+TGG + chr5_3:38061587-38061606 Msa0810080:intron 40.0%
! CCTTCCATTTTCTGCTTGAT+GGG + chr5_3:38061588-38061607 Msa0810080:intron 40.0%
!! CCTCCTTTTTCATGTAACCA+AGG - chr5_3:38061638-38061657 None:intergenic 40.0%
CCTTGGTTACATGAAAAAGG+AGG + chr5_3:38061635-38061654 Msa0810080:intron 40.0%
!! ATAGCTTTTGGTTGTCGTGT+GGG - chr5_3:38061796-38061815 None:intergenic 40.0%
!! AATAGCTTTTGGTTGTCGTG+TGG - chr5_3:38061797-38061816 None:intergenic 40.0%
! ATTGTGCTTGCTGAATCTGT+GGG - chr5_3:38062200-38062219 None:intergenic 40.0%
! TATTGTGCTTGCTGAATCTG+TGG - chr5_3:38062201-38062220 None:intergenic 40.0%
TGGACCATCATCTTCAACAA+TGG + chr5_3:38062236-38062255 Msa0810080:CDS 40.0%
GGACCATCATCTTCAACAAT+GGG + chr5_3:38062237-38062256 Msa0810080:CDS 40.0%
GAACCCATTGTTGAAGATGA+TGG - chr5_3:38062243-38062262 None:intergenic 40.0%
GTAGGGTAGTATAGATAGGA+TGG - chr5_3:38062351-38062370 None:intergenic 40.0%
ATACTACCCTACTACACCAA+TGG + chr5_3:38062359-38062378 Msa0810080:CDS 40.0%
! GGAGAAGGTTGCCTTATTAA+TGG - chr5_3:38062426-38062445 None:intergenic 40.0%
AAGATTACCACTAGGAGAAG+GGG - chr5_3:38062451-38062470 None:intergenic 40.0%
GAAAGATTACCACTAGGAGA+AGG - chr5_3:38062453-38062472 None:intergenic 40.0%
CTATGGTAGTTAACTACCGT+CGG - chr5_3:38062782-38062801 None:intergenic 40.0%
AGAGTGGGGTAAAAAGAAAG+AGG + chr5_3:38062974-38062993 Msa0810080:intron 40.0%
GAGTGGGGTAAAAAGAAAGA+GGG + chr5_3:38062975-38062994 Msa0810080:intron 40.0%
AGTGGGGTAAAAAGAAAGAG+GGG + chr5_3:38062976-38062995 Msa0810080:intron 40.0%
TTGCTATAACATGTGGACAC+AGG + chr5_3:38063063-38063082 Msa0810080:intron 40.0%
TGCTATAACATGTGGACACA+GGG + chr5_3:38063064-38063083 Msa0810080:intron 40.0%
AATGAGAGAGAGTGAGAAGA+GGG + chr5_3:38063165-38063184 Msa0810080:intron 40.0%
!! GGTCTTTGCTTTTCATGCAT+TGG + chr5_3:38063265-38063284 Msa0810080:intron 40.0%
! AAGGTACTTAAATCGTCCCT+AGG + chr5_3:38063730-38063749 Msa0810080:intron 40.0%
CATGTGAAGGTGAGTCAAAA+AGG + chr5_3:38064026-38064045 Msa0810080:intron 40.0%
GACAAGTTCATGGTGCAATT+TGG - chr5_3:38064185-38064204 None:intergenic 40.0%
! ATACAGGTTGAAACTAAGGG+GGG - chr5_3:38064809-38064828 None:intergenic 40.0%
AGTGAAGAACACAAGTCATG+TGG - chr5_3:38064911-38064930 None:intergenic 40.0%
GCTTCTCTTCCTTCTCTCTT+TGG + chr5_3:38057323-38057342 Msa0810080:five_prime_UTR 45.0%
GAGAAAAGAGAGAGAGAGGT+GGG - chr5_3:38057541-38057560 None:intergenic 45.0%
AGAGAAAAGAGAGAGAGAGG+TGG - chr5_3:38057542-38057561 None:intergenic 45.0%
!! AGAGGTGTTGTTGAATGGTG+GGG + chr5_3:38057600-38057619 Msa0810080:five_prime_UTR 45.0%
GTGATCCAGAATCAGCTAGA+AGG + chr5_3:38058070-38058089 Msa0810080:CDS 45.0%
GATCCAAACCCGGTAATTGA+TGG + chr5_3:38058102-38058121 Msa0810080:CDS 45.0%
CTTCCATCAATTACCGGGTT+TGG - chr5_3:38058108-38058127 None:intergenic 45.0%
TGTAATGTAATGCTGCAGGG+AGG + chr5_3:38058626-38058645 Msa0810080:intron 45.0%
GTAATGTAATGCTGCAGGGA+GGG + chr5_3:38058627-38058646 Msa0810080:intron 45.0%
TAATGTAATGCTGCAGGGAG+GGG + chr5_3:38058628-38058647 Msa0810080:intron 45.0%
! CCGTATGGTTGGTACATAAC+TGG - chr5_3:38058763-38058782 None:intergenic 45.0%
AGCTAACTTACCCGTATGGT+TGG - chr5_3:38058774-38058793 None:intergenic 45.0%
! ATAGTCAGTCAAAGGGGTAC+TGG + chr5_3:38058855-38058874 Msa0810080:intron 45.0%
AGACCTACTGTAATTGGAGG+GGG - chr5_3:38058950-38058969 None:intergenic 45.0%
GAGACCTACTGTAATTGGAG+GGG - chr5_3:38058951-38058970 None:intergenic 45.0%
TAGAAAGGGGGGCTATAATG+TGG + chr5_3:38059466-38059485 Msa0810080:intron 45.0%
GTTTATAGAAACCTCAGGGG+AGG - chr5_3:38060230-38060249 None:intergenic 45.0%
GCTGCAGTGGAAGATTATGT+TGG + chr5_3:38060364-38060383 Msa0810080:intron 45.0%
GGCTAAGATGTCTATCACCT+TGG + chr5_3:38060385-38060404 Msa0810080:intron 45.0%
CAACTCCTTGCAAGGGAAAT+TGG + chr5_3:38060408-38060427 Msa0810080:intron 45.0%
AAATTGGCACCTCCATCTCA+GGG + chr5_3:38060424-38060443 Msa0810080:intron 45.0%
TTCTCAATTTGCCCCTGAGA+TGG - chr5_3:38060439-38060458 None:intergenic 45.0%
TTGTGAGTTCCATTGGAGGT+TGG - chr5_3:38060691-38060710 None:intergenic 45.0%
! GGAATCCAAATGCTCTGAGT+TGG - chr5_3:38060839-38060858 None:intergenic 45.0%
TGATTCGAAATTGACGACGG+CGG + chr5_3:38060881-38060900 Msa0810080:intron 45.0%
ACAGAGTTAGATTAGAGGGG+AGG + chr5_3:38061041-38061060 Msa0810080:intron 45.0%
GTTTAAACAAACCTCAGGGG+AGG + chr5_3:38061101-38061120 Msa0810080:intron 45.0%
TATTACAGTTACCTCCCCTG+AGG - chr5_3:38061115-38061134 None:intergenic 45.0%
GTTAGTCCTAAGGGGTCTAT+TGG + chr5_3:38061240-38061259 Msa0810080:intron 45.0%
CCCATCAAGCAGAAAATGGA+AGG - chr5_3:38061591-38061610 None:intergenic 45.0%
!! TAGCTTTTGGTTGTCGTGTG+GGG - chr5_3:38061795-38061814 None:intergenic 45.0%
AGCTTGTATGCGATGTGGTT+GGG - chr5_3:38062325-38062344 None:intergenic 45.0%
TACCCTACTACACCAATGGA+AGG + chr5_3:38062363-38062382 Msa0810080:CDS 45.0%
CTCCTTCCATTGGTGTAGTA+GGG - chr5_3:38062368-38062387 None:intergenic 45.0%
GTGAAAGAAGCTCCTTCCAT+TGG - chr5_3:38062378-38062397 None:intergenic 45.0%
GCTATAACATGTGGACACAG+GGG + chr5_3:38063065-38063084 Msa0810080:intron 45.0%
AGCTCATTCACATGGGTCTT+GGG - chr5_3:38063104-38063123 None:intergenic 45.0%
CCAAGACAGCTCATTCACAT+GGG - chr5_3:38063111-38063130 None:intergenic 45.0%
ACCAAGACAGCTCATTCACA+TGG - chr5_3:38063112-38063131 None:intergenic 45.0%
CAATGAGAGAGAGTGAGAAG+AGG + chr5_3:38063164-38063183 Msa0810080:intron 45.0%
GCATGTGGTTTCTGTATGCA+TGG + chr5_3:38063212-38063231 Msa0810080:intron 45.0%
TGTGGTTTCTGTATGCATGG+TGG + chr5_3:38063215-38063234 Msa0810080:intron 45.0%
GAAGGAGGAGAAACCATTAG+AGG - chr5_3:38063845-38063864 None:intergenic 45.0%
! TACAGGTTGAAACTAAGGGG+GGG - chr5_3:38064808-38064827 None:intergenic 45.0%
!! TTATATACTATTTATAATTT+CGG + chr5_3:38058242-38058261 Msa0810080:intron 5.0%
!! ACTAAATATATAAAATTTAT+TGG + chr5_3:38061170-38061189 Msa0810080:intron 5.0%
!!! TTTTTATTTATTTGTTAAAT+AGG + chr5_3:38064056-38064075 Msa0810080:intron 5.0%
!!! TTTTATTTATTTGTTAAATA+GGG + chr5_3:38064057-38064076 Msa0810080:intron 5.0%
!! TTTAGAAAATAATATTAAAT+AGG - chr5_3:38064550-38064569 None:intergenic 5.0%
AAGAGAGAGAGAGGTGGGTA+TGG - chr5_3:38057536-38057555 None:intergenic 50.0%
! CAAGCCCTTCTAGCTGATTC+TGG - chr5_3:38058078-38058097 None:intergenic 50.0%
! GGAGGGGTACATATCAAGGT+GGG + chr5_3:38058644-38058663 Msa0810080:CDS 50.0%
! GAGGGGTACATATCAAGGTG+GGG + chr5_3:38058645-38058664 Msa0810080:CDS 50.0%
! AGGGGTACATATCAAGGTGG+GGG + chr5_3:38058646-38058665 Msa0810080:CDS 50.0%
TACATATCAAGGTGGGGGTG+TGG + chr5_3:38058651-38058670 Msa0810080:CDS 50.0%
! ACATATCAAGGTGGGGGTGT+GGG + chr5_3:38058652-38058671 Msa0810080:CDS 50.0%
GGGAGCAGTCAAGAGACATA+TGG - chr5_3:38058930-38058949 None:intergenic 50.0%
AAAGGGGGGCTATAATGTGG+TGG + chr5_3:38059469-38059488 Msa0810080:intron 50.0%
AAGGGGGGCTATAATGTGGT+GGG + chr5_3:38059470-38059489 Msa0810080:intron 50.0%
TCCACGGCAAACACATGTAG+TGG + chr5_3:38059638-38059657 Msa0810080:intron 50.0%
ACCACTACATGTGTTTGCCG+TGG - chr5_3:38059642-38059661 None:intergenic 50.0%
AATTACACTCACCTCCCCTG+AGG + chr5_3:38060216-38060235 Msa0810080:intron 50.0%
ACGGCGTTAACATACAAGGG+AGG - chr5_3:38060323-38060342 None:intergenic 50.0%
ACCTTGGCAACTCCTTGCAA+GGG + chr5_3:38060401-38060420 Msa0810080:intron 50.0%
AGGTGCCAATTTCCCTTGCA+AGG - chr5_3:38060416-38060435 None:intergenic 50.0%
GAAATTGGCACCTCCATCTC+AGG + chr5_3:38060423-38060442 Msa0810080:intron 50.0%
AATTGGCACCTCCATCTCAG+GGG + chr5_3:38060425-38060444 Msa0810080:intron 50.0%
TCAATTTGCCCCTGAGATGG+AGG - chr5_3:38060436-38060455 None:intergenic 50.0%
! ATGTAATGGCGTAATGGGGC+TGG - chr5_3:38060663-38060682 None:intergenic 50.0%
GACACACATCCTCTAGCGTT+CGG + chr5_3:38060903-38060922 Msa0810080:intron 50.0%
ATCCTCTAGCGTTCGGATGT+AGG + chr5_3:38060910-38060929 Msa0810080:intron 50.0%
TACCTACATCCGAACGCTAG+AGG - chr5_3:38060915-38060934 None:intergenic 50.0%
GCGTTCGGATGTAGGTATAC+TGG + chr5_3:38060918-38060937 Msa0810080:intron 50.0%
GGATGTAGGTATACTGGCGA+TGG + chr5_3:38060924-38060943 Msa0810080:intron 50.0%
! CGTATTCAGGAGTGTAGGTG+GGG - chr5_3:38062019-38062038 None:intergenic 50.0%
! CCGTATTCAGGAGTGTAGGT+GGG - chr5_3:38062020-38062039 None:intergenic 50.0%
CCCACCTACACTCCTGAATA+CGG + chr5_3:38062017-38062036 Msa0810080:CDS 50.0%
CCACCTACACTCCTGAATAC+GGG + chr5_3:38062018-38062037 Msa0810080:CDS 50.0%
! GTACCCGTATTCAGGAGTGT+AGG - chr5_3:38062024-38062043 None:intergenic 50.0%
!! ACTTGAGGGTACCCGTATTC+AGG - chr5_3:38062032-38062051 None:intergenic 50.0%
GGAGGGAGATGCTTACTTGA+GGG - chr5_3:38062046-38062065 None:intergenic 50.0%
TATGCAAGCAGCAGCACCAA+GGG + chr5_3:38062284-38062303 Msa0810080:CDS 50.0%
GCTTGTATGCGATGTGGTTG+GGG - chr5_3:38062324-38062343 None:intergenic 50.0%
CAGCTTGTATGCGATGTGGT+TGG - chr5_3:38062326-38062345 None:intergenic 50.0%
CAACCACATCGCATACAAGC+TGG + chr5_3:38062324-38062343 Msa0810080:CDS 50.0%
GCTCCTTCCATTGGTGTAGT+AGG - chr5_3:38062369-38062388 None:intergenic 50.0%
TTACCACTAGGAGAAGGGGT+AGG - chr5_3:38062447-38062466 None:intergenic 50.0%
CAGCTCATTCACATGGGTCT+TGG - chr5_3:38063105-38063124 None:intergenic 50.0%
CCCATGTGAATGAGCTGTCT+TGG + chr5_3:38063108-38063127 Msa0810080:intron 50.0%
ACCTCATCAGAGACAGCATC+TGG + chr5_3:38064717-38064736 Msa0810080:CDS 50.0%
TCCAGATGCTGTCTCTGATG+AGG - chr5_3:38064721-38064740 None:intergenic 50.0%
! GCTTGCTGGCCAAAGAGAGA+AGG - chr5_3:38057335-38057354 None:intergenic 55.0%
! GGCTTGTGCTGATCCAAACC+CGG + chr5_3:38058092-38058111 Msa0810080:CDS 55.0%
!! CCTCTTGGTGGTGATGGTCT+AGG - chr5_3:38058165-38058184 None:intergenic 55.0%
CCTAGACCATCACCACCAAG+AGG + chr5_3:38058162-38058181 Msa0810080:CDS 55.0%
! GCAGGGAGGGGTACATATCA+AGG + chr5_3:38058640-38058659 Msa0810080:intron 55.0%
! GGGAGGGGTACATATCAAGG+TGG + chr5_3:38058643-38058662 Msa0810080:intron 55.0%
! CATATCAAGGTGGGGGTGTG+GGG + chr5_3:38058653-38058672 Msa0810080:CDS 55.0%
! GTTGCTCCTCCTGCCATTTG+TGG - chr5_3:38058733-38058752 None:intergenic 55.0%
!! GTCAAAGGGGTACTGGTCCA+TGG + chr5_3:38058862-38058881 Msa0810080:intron 55.0%
GCTCCCCCTCCAATTACAGT+AGG + chr5_3:38058944-38058963 Msa0810080:intron 55.0%
CACCTTGGCAACTCCTTGCA+AGG + chr5_3:38060400-38060419 Msa0810080:intron 55.0%
TCCCTTGCAAGGAGTTGCCA+AGG - chr5_3:38060405-38060424 None:intergenic 55.0%
! CCCGTATTCAGGAGTGTAGG+TGG - chr5_3:38062021-38062040 None:intergenic 55.0%
GGGAGGGAGATGCTTACTTG+AGG - chr5_3:38062047-38062066 None:intergenic 55.0%
CTATGCAAGCAGCAGCACCA+AGG + chr5_3:38062283-38062302 Msa0810080:CDS 55.0%
ATGCAAGCAGCAGCACCAAG+GGG + chr5_3:38062285-38062304 Msa0810080:CDS 55.0%
GGTCCAGCTTGTATGCGATG+TGG - chr5_3:38062330-38062349 None:intergenic 55.0%
CTAGGAGAAGGGGTAGGAGA+AGG - chr5_3:38062441-38062460 None:intergenic 55.0%
TCTCCTACCCCTTCTCCTAG+TGG + chr5_3:38062441-38062460 Msa0810080:CDS 55.0%
TGGGTCTTGGGTTACCCATG+TGG - chr5_3:38063092-38063111 None:intergenic 55.0%
ATTTGTGGTGGCCCTCCTGC+CGG - chr5_3:38058718-38058737 None:intergenic 60.0%
! GCTCCTCCTGCCATTTGTGG+TGG - chr5_3:38058730-38058749 None:intergenic 60.0%
TGTGGACACAGGGGTCCACA+TGG + chr5_3:38063074-38063093 Msa0810080:intron 60.0%
GTGGACACAGGGGTCCACAT+GGG + chr5_3:38063075-38063094 Msa0810080:intron 60.0%
!! AGGAGCACCAGGAGCAGCAG+CGG + chr5_3:38058678-38058697 Msa0810080:CDS 65.0%
AGCGGCGTACGGTGGTGTTC+CGG + chr5_3:38058696-38058715 Msa0810080:CDS 65.0%
TACGGTGGTGTTCCGGCAGG+AGG + chr5_3:38058703-38058722 Msa0810080:CDS 65.0%
ACGGTGGTGTTCCGGCAGGA+GGG + chr5_3:38058704-38058723 Msa0810080:CDS 65.0%
GGCAGGAGGGCCACCACAAA+TGG + chr5_3:38058717-38058736 Msa0810080:CDS 65.0%
GGAGGGCCACCACAAATGGC+AGG + chr5_3:38058721-38058740 Msa0810080:CDS 65.0%
GGGCCACCACAAATGGCAGG+AGG + chr5_3:38058724-38058743 Msa0810080:CDS 65.0%
! CAAGGTGGGGGTGTGGGGAC+AGG + chr5_3:38058658-38058677 Msa0810080:CDS 70.0%
!! GGTGTGGGGACAGGAGCACC+AGG + chr5_3:38058667-38058686 Msa0810080:CDS 70.0%
CCAGGAGCAGCAGCGGCGTA+CGG + chr5_3:38058685-38058704 Msa0810080:CDS 70.0%
GCGTACGGTGGTGTTCCGGC+AGG + chr5_3:38058700-38058719 Msa0810080:CDS 70.0%
CCGTACGCCGCTGCTGCTCC+TGG - chr5_3:38058688-38058707 None:intergenic 75.0%
GGAGCAGCAGCGGCGTACGG+TGG + chr5_3:38058688-38058707 Msa0810080:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 38057310 38065034 38057310 ID=Msa0810080;Name=Msa0810080
chr5_3 mRNA 38057310 38065034 38057310 ID=Msa0810080-mRNA-1;Parent=Msa0810080;Name=Msa0810080-mRNA-1;_AED=0.04;_eAED=0.04;_QI=474|1|1|1|1|1|6|243|285
chr5_3 exon 38057310 38057966 38057310 ID=Msa0810080-mRNA-1:exon:11625;Parent=Msa0810080-mRNA-1
chr5_3 exon 38058060 38058183 38058060 ID=Msa0810080-mRNA-1:exon:11626;Parent=Msa0810080-mRNA-1
chr5_3 exon 38058644 38058782 38058644 ID=Msa0810080-mRNA-1:exon:11627;Parent=Msa0810080-mRNA-1
chr5_3 exon 38062013 38062049 38062013 ID=Msa0810080-mRNA-1:exon:11628;Parent=Msa0810080-mRNA-1
chr5_3 exon 38062183 38062462 38062183 ID=Msa0810080-mRNA-1:exon:11629;Parent=Msa0810080-mRNA-1
chr5_3 exon 38064697 38065034 38064697 ID=Msa0810080-mRNA-1:exon:11630;Parent=Msa0810080-mRNA-1
chr5_3 five_prime_UTR 38057310 38057783 38057310 ID=Msa0810080-mRNA-1:five_prime_utr;Parent=Msa0810080-mRNA-1
chr5_3 CDS 38057784 38057966 38057784 ID=Msa0810080-mRNA-1:cds;Parent=Msa0810080-mRNA-1
chr5_3 CDS 38058060 38058183 38058060 ID=Msa0810080-mRNA-1:cds;Parent=Msa0810080-mRNA-1
chr5_3 CDS 38058644 38058782 38058644 ID=Msa0810080-mRNA-1:cds;Parent=Msa0810080-mRNA-1
chr5_3 CDS 38062013 38062049 38062013 ID=Msa0810080-mRNA-1:cds;Parent=Msa0810080-mRNA-1
chr5_3 CDS 38062183 38062462 38062183 ID=Msa0810080-mRNA-1:cds;Parent=Msa0810080-mRNA-1
chr5_3 CDS 38064697 38064791 38064697 ID=Msa0810080-mRNA-1:cds;Parent=Msa0810080-mRNA-1
chr5_3 three_prime_UTR 38064792 38065034 38064792 ID=Msa0810080-mRNA-1:three_prime_utr;Parent=Msa0810080-mRNA-1
Gene Sequence

>Msa0810080

ATGGCTTATCCACATTATCGATCACAATTTGGAGACACAACATTCACTAAGGTTTTTGTTGGAGGACTAGCTTGGGAAACTCCAACTGATGAAATGAGGACATATTTTGAACAATTTGGTGACATACTTGAAGCTGTCATTATCACTGATAAGAATACAGGAAAATCTAAAGGATACGGATTTGTAACATTTCGTGATCCAGAATCAGCTAGAAGGGCTTGTGCTGATCCAAACCCGGTAATTGATGGAAGAAGAGCTAATTGTAACATTGCTTCTCTTGGTCGTCCTAGACCATCACCACCAAGAGGGAGGGGTACATATCAAGGTGGGGGTGTGGGGACAGGAGCACCAGGAGCAGCAGCGGCGTACGGTGGTGTTCCGGCAGGAGGGCCACCACAAATGGCAGGAGGAGCAACAGCAGCTCCAGTTATGTACCAACCATACGGCTACCCCACCTACACTCCTGAATACGGGTACCCTCAAGCTACAATGTATAACCCACAGATTCAGCAAGCACAATACTATCAACAACTTTATGGACCATCATCTTCAACAATGGGTTCACCATATTATTATGGCTATTCTATGCAAGCAGCAGCACCAAGGGGTACATTTTCAACACCCCAACCACATCGCATACAAGCTGGACCATCCTATCTATACTACCCTACTACACCAATGGAAGGAGCTTCTTTCACTGCTGCATATCGTCCACTTCAACAACCATTAATAAGGCAACCTTCTCCTACCCCTTCTCCTAGTGATTCACAGACTCAGCAACGTACCTCATCAGAGACAGCATCTGGAGTAGTTATAACTTCGGAAAGATCAAATACTCAAGGGAAGAACAACAACTAA
Protein sequence

>Msa0810080

MAYPHYRSQFGDTTFTKVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTYQGGGVGTGAPGAAAAYGGVPAGGPPQMAGGATAAPVMYQPYGYPTYTPEYGYPQATMYNPQIQQAQYYQQLYGPSSSTMGSPYYYGYSMQAAAPRGTFSTPQPHRIQAGPSYLYYPTTPMEGASFTAAYRPLQQPLIRQPSPTPSPSDSQTQQRTSSETASGVVITSERSNTQGKNNN*