AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1073550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1073550 MtrunA17_Chr7g0256591 93.893 393 24 0 1 393 1 393 0.0 769
Msa1073550 MtrunA17_Chr7g0256601 92.132 394 30 1 1 393 31 424 0.0 752
Msa1073550 MtrunA17_Chr7g0256571 47.734 331 161 5 55 385 50 368 1.19e-108 323
Msa1073550 MtrunA17_Chr7g0256581 42.857 385 203 7 1 385 1 368 5.45e-105 314
Msa1073550 MtrunA17_Chr7g0256561 45.455 330 130 4 56 385 55 334 1.64e-99 299
Msa1073550 MtrunA17_Chr2g0322241 40.741 405 206 10 3 385 2 394 2.77e-93 285
Msa1073550 MtrunA17_Chr4g0025341 40.347 404 204 12 5 385 1 390 4.36e-92 282
Msa1073550 MtrunA17_Chr5g0443561 40.751 373 152 7 29 385 3 322 8.59e-88 268
Msa1073550 MtrunA17_Chr2g0329531 38.043 368 194 9 24 376 48 396 3.27e-83 259
Msa1073550 MtrunA17_Chr4g0062031 37.764 331 160 6 57 384 37 324 6.76e-67 215
Msa1073550 MtrunA17_Chr4g0062001 37.771 323 170 7 58 380 39 330 8.03e-66 213
Msa1073550 MtrunA17_Chr8g0376581 37.461 323 169 6 58 380 37 326 2.45e-65 211
Msa1073550 MtrunA17_Chr2g0307721 37.304 319 168 4 58 376 47 333 2.57e-62 214
Msa1073550 MtrunA17_Chr2g0307721 37.500 328 165 8 58 381 499 790 1.64e-55 195
Msa1073550 MtrunA17_Chr2g0307721 39.744 78 46 1 120 197 345 421 1.63e-11 66.2
Msa1073550 MtrunA17_Chr4g0062021 37.082 329 172 7 58 384 51 346 6.64e-62 202
Msa1073550 MtrunA17_Chr4g0020271 36.098 205 106 3 172 376 2 181 7.64e-36 130
Msa1073550 MtrunA17_Chr8g0370791 29.129 333 196 6 53 385 73 365 3.72e-35 133
Msa1073550 MtrunA17_Chr8g0370761 28.529 333 198 6 53 385 73 365 8.59e-35 132
Msa1073550 MtrunA17_Chr2g0300851 26.615 387 237 11 5 384 1 347 5.48e-31 121
Msa1073550 MtrunA17_Chr2g0300841 30.830 253 160 7 136 384 114 355 1.63e-29 117
Msa1073550 MtrunA17_Chr2g0300861 26.686 341 211 8 45 383 62 365 5.01e-27 110
Msa1073550 MtrunA17_Chr8g0370771 30.144 209 124 4 183 385 38 230 1.35e-25 103
Msa1073550 MtrunA17_Chr4g0062051 39.286 140 79 3 58 197 42 175 1.10e-24 99.8
Msa1073550 MtrunA17_Chr4g0061871 41.837 98 57 0 197 294 18 115 9.76e-24 95.5
Msa1073550 MtrunA17_Chr4g0062061 30.719 153 69 2 236 386 4 121 1.54e-15 72.4
Msa1073550 MtrunA17_Chr8g0370801 32.710 107 69 2 145 249 2 107 2.47e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1073550 AT2G41290.1 53.412 337 140 8 55 384 48 374 3.05e-124 364
Msa1073550 AT3G57030.1 45.078 386 192 8 7 385 1 373 5.85e-112 332
Msa1073550 AT5G22020.3 43.658 339 183 5 47 385 64 394 4.22e-92 282
Msa1073550 AT5G22020.1 43.658 339 183 5 47 385 64 394 4.22e-92 282
Msa1073550 AT5G22020.2 43.658 339 183 5 47 385 64 394 4.22e-92 282
Msa1073550 AT1G08470.1 44.144 333 176 6 54 385 65 388 1.67e-91 281
Msa1073550 AT3G59530.3 37.815 357 201 7 23 376 49 387 3.86e-80 252
Msa1073550 AT3G59530.2 37.815 357 201 7 23 376 49 387 3.86e-80 252
Msa1073550 AT3G59530.1 37.815 357 201 7 23 376 49 387 3.86e-80 252
Msa1073550 AT3G57020.1 38.551 345 194 8 39 381 36 364 1.74e-78 246
Msa1073550 AT3G57010.1 39.710 345 188 10 50 392 50 376 1.31e-77 244
Msa1073550 AT2G41300.1 39.875 321 176 7 63 381 83 388 2.80e-76 242
Msa1073550 AT3G57020.2 36.812 345 186 7 39 381 36 350 9.94e-74 234
Msa1073550 AT1G74010.1 36.842 342 171 10 41 380 21 319 2.46e-58 193
Msa1073550 AT1G74000.1 35.629 334 172 7 50 381 32 324 6.23e-58 192
Msa1073550 AT1G74020.1 35.673 342 176 9 41 380 22 321 1.01e-57 192
Msa1073550 AT3G51440.1 33.161 193 122 5 124 315 113 299 8.46e-25 104
Msa1073550 AT3G51430.1 33.333 189 119 5 124 311 113 295 9.06e-25 104
Msa1073550 AT3G51420.1 29.437 231 150 7 124 353 113 331 2.12e-24 103
Msa1073550 AT3G51430.2 34.031 191 113 7 124 311 113 293 1.11e-23 101
Msa1073550 AT3G51450.1 31.443 194 126 5 124 316 113 300 3.92e-23 100

Find 107 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACCAAACTCTCTTGTTT+TGG 0.194688 7_2:-71133585 None:intergenic
ACTTCCAATGTTCCAGCTTT+AGG 0.237744 7_2:-71137427 None:intergenic
GGAGTCCAAGAGGAGGATTT+TGG 0.244632 7_2:+71137488 Msa1073550:CDS
ACGATTGAAGATAGAGTTAT+AGG 0.271398 7_2:-71133636 None:intergenic
CCTTCGGAGTTTCCGATGTT+TGG 0.289970 7_2:+71133770 Msa1073550:CDS
CTACAAAATGTAGAATATTA+AGG 0.335376 7_2:+71137389 Msa1073550:CDS
GGAGTACTGGATTGGCAATT+AGG 0.337863 7_2:+71137638 Msa1073550:CDS
CGATTGAAGATAGAGTTATA+GGG 0.347659 7_2:-71133635 None:intergenic
CACATATGTGGGCGCCCACT+TGG 0.354006 7_2:+71136857 Msa1073550:CDS
AATGTAGAATATTAAGGTAT+TGG 0.356659 7_2:+71137395 Msa1073550:CDS
TTTGGCTTTCACAAACAGTT+TGG 0.368869 7_2:+71137003 Msa1073550:CDS
CACCCCAAAACAAGAGAGTT+TGG 0.386853 7_2:+71133581 Msa1073550:five_prime_UTR
TGGTAACTATATTCTAATAT+CGG 0.386871 7_2:+71137363 Msa1073550:CDS
TGTTTGGCAATACGAGAGTA+TGG 0.404679 7_2:+71133786 Msa1073550:CDS
TCATATCCTTGGATAGGAAA+AGG 0.429001 7_2:+71137556 Msa1073550:CDS
GTGAGGTTGAGGAAAGAGAT+GGG 0.434748 7_2:+71137728 Msa1073550:CDS
CCATCGGAAACTCCGGTATA+AGG 0.437831 7_2:-71133871 None:intergenic
TTGGATATTGATCAACGAAC+TGG 0.446101 7_2:+71137022 Msa1073550:CDS
TCTCTCATATTTAGAACTGC+TGG 0.447647 7_2:-71137062 None:intergenic
AACAATCTCACATTTGCAAA+TGG 0.458350 7_2:+71137322 Msa1073550:CDS
AGTGAGGTTGAGGAAAGAGA+TGG 0.459563 7_2:+71137727 Msa1073550:CDS
TTATGTTGCCGATGCATACA+TGG 0.462200 7_2:+71136910 Msa1073550:CDS
CATATTTGGCTAAGGTGAAA+GGG 0.464547 7_2:+71137617 Msa1073550:CDS
AACACCTAAAGCTGGAACAT+TGG 0.466304 7_2:+71137423 Msa1073550:CDS
AATGGATGCTATCATATCCT+TGG 0.470516 7_2:+71137545 Msa1073550:CDS
TACGTGTCTCTGATTCTAAC+CGG 0.472737 7_2:+71137238 Msa1073550:CDS
CTGTGTTTCAACATAGCATC+TGG 0.472914 7_2:+71136881 Msa1073550:CDS
AACTTATTCATATTTGGCTA+AGG 0.473266 7_2:+71137609 Msa1073550:CDS
CCATGGAGTTACACCATTCA+AGG 0.477372 7_2:+71133729 Msa1073550:CDS
GGCACCGTCATCAGAACCAT+TGG 0.481600 7_2:+71133908 Msa1073550:CDS
TGCAGTAGAAGATCAACCTT+TGG 0.482264 7_2:+71136985 Msa1073550:CDS
GGATCAAAGGCGAAACTCTC+CGG 0.484973 7_2:-71133835 None:intergenic
GCCTTTGATCCTCACGGTGA+AGG 0.485251 7_2:+71133847 Msa1073550:CDS
TCATATTTGGCTAAGGTGAA+AGG 0.488191 7_2:+71137616 Msa1073550:CDS
TGATAACGGTGCCGTTGGAC+CGG 0.488582 7_2:+71133816 Msa1073550:CDS
TTGTTATACTTAATAACAAA+AGG 0.490638 7_2:-71137778 None:intergenic
ATCATAGTAGTGGTAATAGA+AGG 0.496861 7_2:+71137698 Msa1073550:CDS
CCAACCCAAAATCCTCCTCT+TGG 0.499403 7_2:-71137493 None:intergenic
CATATCCTTGGATAGGAAAA+GGG 0.499930 7_2:+71137557 Msa1073550:CDS
CCGATGGACACATCATCAAA+TGG 0.500895 7_2:+71133887 Msa1073550:CDS
GCTAAGGTGAAAGGGAGTAC+TGG 0.506609 7_2:+71137625 Msa1073550:CDS
ATTCTAACCGGTGACAACTC+AGG 0.515497 7_2:+71137250 Msa1073550:CDS
CTAGTTGTTATTGAGCCCAC+TGG 0.517702 7_2:+71136935 Msa1073550:CDS
GTTTCTGTGACATCCTTGAA+TGG 0.520264 7_2:-71133742 None:intergenic
AAGGTCTATTAGTGAGGTTG+AGG 0.522210 7_2:+71137717 Msa1073550:CDS
AGAGATGGGGTACTGTGGGT+TGG 0.523285 7_2:+71137742 Msa1073550:CDS
TCCTTCACCGTGAGGATCAA+AGG 0.524724 7_2:-71133848 None:intergenic
GAAGTCTTTGCTAATCTACC+AGG 0.529415 7_2:+71137445 Msa1073550:CDS
ACATATGTGGGCGCCCACTT+GGG 0.533208 7_2:+71136858 Msa1073550:CDS
GTCACAGAAACATCAACCTT+CGG 0.533655 7_2:+71133754 Msa1073550:CDS
AGGAAAGAGATGGGGTACTG+TGG 0.538928 7_2:+71137737 Msa1073550:CDS
TTTATGTTGTCGGGAAAACC+TGG 0.539609 7_2:-71137463 None:intergenic
ATTAAGTATAACAATTCTTG+TGG 0.545015 7_2:+71137787 Msa1073550:CDS
GGCAATTAGGCTAAGTGAGG+AGG 0.546325 7_2:+71137651 Msa1073550:CDS
GGTGAAAGGGAGTACTGGAT+TGG 0.549277 7_2:+71137630 Msa1073550:CDS
AAGTGAGGAGGGTGATGTGT+TGG 0.550992 7_2:+71137663 Msa1073550:CDS
GAGTCCACAACTGCATCTTA+CGG 0.553341 7_2:+71133663 Msa1073550:CDS
CACGGTGAAGGACCTTATAC+CGG 0.553418 7_2:+71133859 Msa1073550:CDS
TGGTTAGAAACACCTAAAGC+TGG 0.557207 7_2:+71137415 Msa1073550:CDS
TTCTAACCGGTGACAACTCA+GGG 0.557370 7_2:+71137251 Msa1073550:CDS
CCACCCAATGGTTCTGATGA+CGG 0.558556 7_2:-71133912 None:intergenic
CCAACGGCACCGTTATCAAT+CGG 0.559327 7_2:-71133811 None:intergenic
GCACCGTCATCAGAACCATT+GGG 0.560313 7_2:+71133909 Msa1073550:CDS
TAGCCTCCCTGAGTTGTCAC+CGG 0.560720 7_2:-71137257 None:intergenic
ATGCTATCATATCCTTGGAT+AGG 0.564422 7_2:+71137550 Msa1073550:CDS
GATGTGTCCATCGGAAACTC+CGG 0.566396 7_2:-71133878 None:intergenic
TCCTTGGATAGGAAAAGGGT+TGG 0.571416 7_2:+71137561 Msa1073550:CDS
GGCGAAACTCTCCGGTCCAA+CGG 0.578554 7_2:-71133827 None:intergenic
CCTTATACCGGAGTTTCCGA+TGG 0.578688 7_2:+71133871 Msa1073550:CDS
AGTATGGTTCCGATTGATAA+CGG 0.581588 7_2:+71133802 Msa1073550:CDS
AACTAGTCCCATGTATGCAT+CGG 0.582211 7_2:-71136918 None:intergenic
AAACTGTTTGTGAAAGCCAA+AGG 0.587101 7_2:-71137001 None:intergenic
GGAAAGAGATGGGGTACTGT+GGG 0.587276 7_2:+71137738 Msa1073550:CDS
TGAGTGTGGAGGACCATACA+AGG 0.588556 7_2:+71136817 Msa1073550:CDS
GCAGTTCTAAATATGAGAGA+AGG 0.590598 7_2:+71137065 Msa1073550:CDS
TTTCTAGCAATGCCACCAGT+GGG 0.590642 7_2:-71136950 None:intergenic
GCATCTTACGGCAGCCGTCG+TGG 0.596001 7_2:+71133675 Msa1073550:CDS
TATGTTGCCGATGCATACAT+GGG 0.607766 7_2:+71136911 Msa1073550:CDS
GATTGAAGATAGAGTTATAG+GGG 0.608670 7_2:-71133634 None:intergenic
ATTGTTGAAGATCATAGTAG+TGG 0.609750 7_2:+71137688 Msa1073550:CDS
AGTTTCGCCTTTGATCCTCA+CGG 0.613880 7_2:+71133841 Msa1073550:CDS
GCAATTAGGCTAAGTGAGGA+GGG 0.616806 7_2:+71137652 Msa1073550:CDS
AGTCATGAAAACTGCCACGA+CGG 0.619124 7_2:-71133689 None:intergenic
CTCATATTTAGAACTGCTGG+AGG 0.621135 7_2:-71137059 None:intergenic
CCAAACATCGGAAACTCCGA+AGG 0.621719 7_2:-71133770 None:intergenic
AACATAAAACGGAGTCCAAG+AGG 0.625086 7_2:+71137478 Msa1073550:CDS
CCGTCACTTCTTCTTCACAC+AGG 0.627944 7_2:+71133941 Msa1073550:CDS
TAATAGAAGGTCTATTAGTG+AGG 0.628030 7_2:+71137711 Msa1073550:CDS
TGAGGTTGAGGAAAGAGATG+GGG 0.628394 7_2:+71137729 Msa1073550:CDS
GATGATGATGTTGATGAGTG+TGG 0.629300 7_2:+71136803 Msa1073550:CDS
CCTTGAATGGTGTAACTCCA+TGG 0.638238 7_2:-71133729 None:intergenic
CCATTTGATGATGTGTCCAT+CGG 0.638335 7_2:-71133887 None:intergenic
GTTGTTATTGAGCCCACTGG+TGG 0.642085 7_2:+71136938 Msa1073550:CDS
CCTGTGTGAAGAAGAAGTGA+CGG 0.648629 7_2:-71133941 None:intergenic
TTGGTGCACATATATATCAG+TGG 0.649482 7_2:+71133600 Msa1073550:five_prime_UTR
CCGTCATCAGAACCATTGGG+TGG 0.653043 7_2:+71133912 Msa1073550:CDS
ATGTTGAAACACAGCCCAAG+TGG 0.656371 7_2:-71136872 None:intergenic
TGACGGCAAAGTCCACCCAA+TGG 0.663166 7_2:-71133924 None:intergenic
TGTTGAAACACAGCCCAAGT+GGG 0.677740 7_2:-71136871 None:intergenic
ATTGGCAATTAGGCTAAGTG+AGG 0.684553 7_2:+71137648 Msa1073550:CDS
GCTGCCGTAAGATGCAGTTG+TGG 0.694965 7_2:-71133667 None:intergenic
GTATAAGGTCCTTCACCGTG+AGG 0.707168 7_2:-71133856 None:intergenic
ACTCTCGTATTGCCAAACAT+CGG 0.715455 7_2:-71133782 None:intergenic
GCATGGTTAGCATACAACCA+TGG 0.716700 7_2:+71133712 Msa1073550:CDS
ATAAAACGGAGTCCAAGAGG+AGG 0.723711 7_2:+71137481 Msa1073550:CDS
GATGATGTTGATGAGTGTGG+AGG 0.743330 7_2:+71136806 Msa1073550:CDS
TAACCGGTGACAACTCAGGG+AGG 0.758453 7_2:+71137254 Msa1073550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTTTATATTTTTTTTTGA+AGG - chr7_2:71134221-71134240 None:intergenic 10.0%
!!! TAAAAAATTTAAAATCACAT+CGG + chr7_2:71135070-71135089 Msa1073550:intron 10.0%
!! TTAGATTTAAAAGAAAAAAA+TGG + chr7_2:71135340-71135359 Msa1073550:intron 10.0%
!!! ATTGTGAATTTTATAATTTA+GGG - chr7_2:71135768-71135787 None:intergenic 10.0%
!!! TATTGTGAATTTTATAATTT+AGG - chr7_2:71135769-71135788 None:intergenic 10.0%
!! AAAATATTAAATTTGGAAAA+TGG - chr7_2:71136439-71136458 None:intergenic 10.0%
!!! ATAAAATATTCTTGTTTACT+TGG + chr7_2:71134844-71134863 Msa1073550:intron 15.0%
!!! TAAAATATTCTTGTTTACTT+GGG + chr7_2:71134845-71134864 Msa1073550:intron 15.0%
!! GTTTAAAAAAATACTGATAT+AGG + chr7_2:71134971-71134990 Msa1073550:intron 15.0%
!! AAAAAAATTAAATTCGATGT+TGG - chr7_2:71135173-71135192 None:intergenic 15.0%
!!! TAATGTTTTTTTTTTCTGAA+AGG - chr7_2:71135197-71135216 None:intergenic 15.0%
!! AAAAAAAACATTAGTGAAAA+AGG + chr7_2:71135204-71135223 Msa1073550:intron 15.0%
!! TTTAAAAGAAAAAAATGGTA+AGG + chr7_2:71135345-71135364 Msa1073550:intron 15.0%
!! TTATTCAATGAATCTAAAAA+AGG - chr7_2:71135489-71135508 None:intergenic 15.0%
!!! TAAGAAAATATTCCTTTTTT+AGG - chr7_2:71135563-71135582 None:intergenic 15.0%
!!! AGTATTTTCAAAAACATAAA+TGG + chr7_2:71136348-71136367 Msa1073550:intron 15.0%
!! TTTATATAAAAAATACTACC+TGG - chr7_2:71136607-71136626 None:intergenic 15.0%
!! TTGTTAGTATAATTTATGAT+CGG + chr7_2:71137137-71137156 Msa1073550:intron 15.0%
!! TAGAAAAATTAAGTCAAAAT+TGG + chr7_2:71137167-71137186 Msa1073550:intron 15.0%
!! AACAAAAACTTATTCATATT+TGG + chr7_2:71137603-71137622 Msa1073550:CDS 15.0%
!! TTGTTATACTTAATAACAAA+AGG - chr7_2:71137781-71137800 None:intergenic 15.0%
!!! AATGGACTATTCAATATTAA+TGG + chr7_2:71134083-71134102 Msa1073550:intron 20.0%
!!! TATTCAATATTAATGGATGA+TGG + chr7_2:71134090-71134109 Msa1073550:intron 20.0%
!!! TATTAATTTTTGAGACGAAA+TGG + chr7_2:71134346-71134365 Msa1073550:intron 20.0%
!! AATGATTTCTAAATACTAGT+AGG - chr7_2:71134376-71134395 None:intergenic 20.0%
!!! TTTAGCTCAAAAATATCATA+CGG - chr7_2:71134909-71134928 None:intergenic 20.0%
!!! AGTATTTTTTTAAACAGACA+AGG - chr7_2:71134966-71134985 None:intergenic 20.0%
!!! CAAAATTTAATTGGTTCAAT+CGG + chr7_2:71135123-71135142 Msa1073550:intron 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG + chr7_2:71135573-71135592 Msa1073550:intron 20.0%
!!! GTATTATATTTTAACCAATC+AGG + chr7_2:71136305-71136324 Msa1073550:intron 20.0%
!! ATGTTGTTCATCTATTAATA+AGG - chr7_2:71136520-71136539 None:intergenic 20.0%
!! TGGTAACTATATTCTAATAT+CGG + chr7_2:71137363-71137382 Msa1073550:CDS 20.0%
!! CTACAAAATGTAGAATATTA+AGG + chr7_2:71137389-71137408 Msa1073550:CDS 20.0%
!! AATGTAGAATATTAAGGTAT+TGG + chr7_2:71137395-71137414 Msa1073550:CDS 20.0%
!! GAAGAGAAAAATTTATTCAA+TGG + chr7_2:71137527-71137546 Msa1073550:CDS 20.0%
!!! TAAGTTTTTGTTATGTCTAA+AGG - chr7_2:71137595-71137614 None:intergenic 20.0%
!! ATTAAGTATAACAATTCTTG+TGG + chr7_2:71137787-71137806 Msa1073550:CDS 20.0%
!! AACATATTTTGCATGAACAA+AGG - chr7_2:71134025-71134044 None:intergenic 25.0%
! GTTCATGCAAAATATGTTAT+TGG + chr7_2:71134027-71134046 Msa1073550:intron 25.0%
! CTTCAGAAATTCTTATAGAA+TGG + chr7_2:71134065-71134084 Msa1073550:intron 25.0%
!!! AATACATTTTAACGAAGAGA+AGG - chr7_2:71134146-71134165 None:intergenic 25.0%
! TCTTCGTTAAAATGTATTCA+GGG + chr7_2:71134148-71134167 Msa1073550:intron 25.0%
!!! TCTTTTTAATTTATGTACCC+TGG - chr7_2:71134178-71134197 None:intergenic 25.0%
! TTAAAATTGTGATGAAGCAA+AGG + chr7_2:71134401-71134420 Msa1073550:intron 25.0%
! AATTACTAGGCTTATACTAT+AGG - chr7_2:71134508-71134527 None:intergenic 25.0%
! AACCAGATCTATAAATTACT+AGG - chr7_2:71134521-71134540 None:intergenic 25.0%
! TTAGCTCAAAAATATCATAC+GGG - chr7_2:71134908-71134927 None:intergenic 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG - chr7_2:71135464-71135483 None:intergenic 25.0%
!! TTTGAAGGATTTTCTTGATT+TGG - chr7_2:71135654-71135673 None:intergenic 25.0%
! ATAGTGAAAGAACCTATTAT+TGG - chr7_2:71136376-71136395 None:intergenic 25.0%
! ACAAGATGTTCAATAAAAGA+CGG + chr7_2:71136472-71136491 Msa1073550:intron 25.0%
! AATAAGATTAGATGAGCAAA+TGG - chr7_2:71136744-71136763 None:intergenic 25.0%
! CAAAAAAAGAACACATATGT+GGG + chr7_2:71136846-71136865 Msa1073550:CDS 25.0%
! TAATGTCTCATAAAAAATGC+AGG + chr7_2:71137212-71137231 Msa1073550:intron 25.0%
! AACTTATTCATATTTGGCTA+AGG + chr7_2:71137609-71137628 Msa1073550:CDS 25.0%
GATTGAAGATAGAGTTATAG+GGG - chr7_2:71133637-71133656 None:intergenic 30.0%
CGATTGAAGATAGAGTTATA+GGG - chr7_2:71133638-71133657 None:intergenic 30.0%
ACGATTGAAGATAGAGTTAT+AGG - chr7_2:71133639-71133658 None:intergenic 30.0%
!! TATTAATGGATGATGGATGT+TGG + chr7_2:71134097-71134116 Msa1073550:intron 30.0%
CTCTTCGTTAAAATGTATTC+AGG + chr7_2:71134147-71134166 Msa1073550:intron 30.0%
AGCCTAGTAATTTATAGATC+TGG + chr7_2:71134516-71134535 Msa1073550:intron 30.0%
CTAGAAGTAAACTTGAATGT+AGG + chr7_2:71134994-71135013 Msa1073550:intron 30.0%
AAGAGAGTTATCACTTGAAT+AGG - chr7_2:71135039-71135058 None:intergenic 30.0%
!! CAATTAAATTTTGACCCTAG+AGG - chr7_2:71135116-71135135 None:intergenic 30.0%
!! CTCTAGGGTCAAAATTTAAT+TGG + chr7_2:71135114-71135133 Msa1073550:intron 30.0%
TTTGCGTGTAAAACATTGAT+GGG + chr7_2:71135371-71135390 Msa1073550:intron 30.0%
ATTAGTACTATACGACAACT+AGG - chr7_2:71135427-71135446 None:intergenic 30.0%
CATTGAGTAGTTAATGTATC+TGG - chr7_2:71135538-71135557 None:intergenic 30.0%
CTACTCAATGAACCTAAAAA+AGG + chr7_2:71135548-71135567 Msa1073550:intron 30.0%
AAAGAGACAAAACTGAAAAC+CGG + chr7_2:71135712-71135731 Msa1073550:intron 30.0%
AGACCTAATAGTACTTATCA+TGG + chr7_2:71136018-71136037 Msa1073550:intron 30.0%
GACCTAATAGTACTTATCAT+GGG + chr7_2:71136019-71136038 Msa1073550:intron 30.0%
TTCCCATGATAAGTACTATT+AGG - chr7_2:71136024-71136043 None:intergenic 30.0%
TAATAGTACTTATCATGGGA+AGG + chr7_2:71136023-71136042 Msa1073550:intron 30.0%
ACATAAATGGAGCCAATAAT+AGG + chr7_2:71136361-71136380 Msa1073550:intron 30.0%
CTCATCTAATCTTATTGTTG+TGG + chr7_2:71136748-71136767 Msa1073550:intron 30.0%
!! GTTGTGGTATAAAGTTGATA+CGG + chr7_2:71136764-71136783 Msa1073550:intron 30.0%
!! TAAAGTTGATACGGTTGATT+TGG + chr7_2:71136773-71136792 Msa1073550:intron 30.0%
!!! CCACATATGTGTTCTTTTTT+TGG - chr7_2:71136848-71136867 None:intergenic 30.0%
CCAAAAAAAGAACACATATG+TGG + chr7_2:71136845-71136864 Msa1073550:CDS 30.0%
!!! ACATTGACTTGTTCACTTTT+TGG - chr7_2:71137295-71137314 None:intergenic 30.0%
AACAATCTCACATTTGCAAA+TGG + chr7_2:71137322-71137341 Msa1073550:CDS 30.0%
ATTGTTGAAGATCATAGTAG+TGG + chr7_2:71137688-71137707 Msa1073550:CDS 30.0%
ATCATAGTAGTGGTAATAGA+AGG + chr7_2:71137698-71137717 Msa1073550:CDS 30.0%
TAATAGAAGGTCTATTAGTG+AGG + chr7_2:71137711-71137730 Msa1073550:CDS 30.0%
TTGGTGCACATATATATCAG+TGG + chr7_2:71133600-71133619 Msa1073550:five_prime_UTR 35.0%
AGTATGGTTCCGATTGATAA+CGG + chr7_2:71133802-71133821 Msa1073550:CDS 35.0%
AGATAGTGTGACAAAGAAAG+AGG - chr7_2:71133984-71134003 None:intergenic 35.0%
TTTAACGAAGAGAAGGTTTC+TGG - chr7_2:71134139-71134158 None:intergenic 35.0%
TCGTTAAAATGTATTCAGGG+AGG + chr7_2:71134151-71134170 Msa1073550:intron 35.0%
CGTTAAAATGTATTCAGGGA+GGG + chr7_2:71134152-71134171 Msa1073550:intron 35.0%
ATGCTTGAATTGTGTGTTAC+AGG - chr7_2:71134483-71134502 None:intergenic 35.0%
TTTACTTGGGTAGACATGTT+TGG + chr7_2:71134858-71134877 Msa1073550:intron 35.0%
AAAATATCATACGGGCAGAA+AGG - chr7_2:71134900-71134919 None:intergenic 35.0%
CAAGTGATAACTCTCTTTGA+CGG + chr7_2:71135042-71135061 Msa1073550:intron 35.0%
CACATCGGAAGATATGTAAT+AGG + chr7_2:71135085-71135104 Msa1073550:intron 35.0%
ATGTAATAGGTTAGACCTCT+AGG + chr7_2:71135098-71135117 Msa1073550:intron 35.0%
TGTAATAGGTTAGACCTCTA+GGG + chr7_2:71135099-71135118 Msa1073550:intron 35.0%
! TTCAATCGGTTTAACTCTGT+TGG + chr7_2:71135137-71135156 Msa1073550:intron 35.0%
! TTAAGATGTTGTTTGCGTGT+GGG + chr7_2:71135233-71135252 Msa1073550:intron 35.0%
! TAACTACTTGCGAGCAATTT+TGG + chr7_2:71135311-71135330 Msa1073550:intron 35.0%
GTTTGCGTGTAAAACATTGA+TGG + chr7_2:71135370-71135389 Msa1073550:intron 35.0%
TTGCGTGTAAAACATTGATG+GGG + chr7_2:71135372-71135391 Msa1073550:intron 35.0%
CTAATATTTACTACTCCCTC+CGG + chr7_2:71135442-71135461 Msa1073550:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - chr7_2:71135577-71135596 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - chr7_2:71135576-71135595 None:intergenic 35.0%
TGTATCTGGTCTACATTGTA+AGG - chr7_2:71135524-71135543 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG + chr7_2:71135576-71135595 Msa1073550:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG + chr7_2:71135577-71135596 Msa1073550:intron 35.0%
! TCATTTTCATATACTCCCTC+CGG - chr7_2:71135595-71135614 None:intergenic 35.0%
TCAAGAAAATCCTTCAAACG+AGG + chr7_2:71135656-71135675 Msa1073550:intron 35.0%
TTCAAACGAGGTAAGAAAGA+GGG + chr7_2:71135668-71135687 Msa1073550:intron 35.0%
! TTTAGCTGAAAGTTTGAGGT+CGG + chr7_2:71135876-71135895 Msa1073550:intron 35.0%
! CAAAGTACTCCTTTAGCTAT+TGG - chr7_2:71135902-71135921 None:intergenic 35.0%
AGGACACTTCATTGTTAGTA+AGG - chr7_2:71136402-71136421 None:intergenic 35.0%
! ATGAAGTGTCCTCTCTAATT+AGG + chr7_2:71136410-71136429 Msa1073550:intron 35.0%
!! TGTAAAGAAGCTTTGAAACC+AGG + chr7_2:71136586-71136605 Msa1073550:intron 35.0%
!!! TTTTTTGGATGCTCCTTGTA+TGG - chr7_2:71136833-71136852 None:intergenic 35.0%
AAACTGTTTGTGAAAGCCAA+AGG - chr7_2:71137004-71137023 None:intergenic 35.0%
!! TTTGGCTTTCACAAACAGTT+TGG + chr7_2:71137003-71137022 Msa1073550:CDS 35.0%
TTGGATATTGATCAACGAAC+TGG + chr7_2:71137022-71137041 Msa1073550:CDS 35.0%
! TCTCTCATATTTAGAACTGC+TGG - chr7_2:71137065-71137084 None:intergenic 35.0%
!! GCAGTTCTAAATATGAGAGA+AGG + chr7_2:71137065-71137084 Msa1073550:CDS 35.0%
! GTTTTCCCGACAACATAAAA+CGG + chr7_2:71137467-71137486 Msa1073550:CDS 35.0%
AATGGATGCTATCATATCCT+TGG + chr7_2:71137545-71137564 Msa1073550:CDS 35.0%
ATGCTATCATATCCTTGGAT+AGG + chr7_2:71137550-71137569 Msa1073550:CDS 35.0%
TCATATCCTTGGATAGGAAA+AGG + chr7_2:71137556-71137575 Msa1073550:CDS 35.0%
CATATCCTTGGATAGGAAAA+GGG + chr7_2:71137557-71137576 Msa1073550:CDS 35.0%
TCATATTTGGCTAAGGTGAA+AGG + chr7_2:71137616-71137635 Msa1073550:CDS 35.0%
CATATTTGGCTAAGGTGAAA+GGG + chr7_2:71137617-71137636 Msa1073550:CDS 35.0%
!!! CACCAAACTCTCTTGTTTTG+GGG - chr7_2:71133586-71133605 None:intergenic 40.0%
!!! GCACCAAACTCTCTTGTTTT+GGG - chr7_2:71133587-71133606 None:intergenic 40.0%
!! TGCACCAAACTCTCTTGTTT+TGG - chr7_2:71133588-71133607 None:intergenic 40.0%
GTTTCTGTGACATCCTTGAA+TGG - chr7_2:71133745-71133764 None:intergenic 40.0%
GTCACAGAAACATCAACCTT+CGG + chr7_2:71133754-71133773 Msa1073550:CDS 40.0%
ACTCTCGTATTGCCAAACAT+CGG - chr7_2:71133785-71133804 None:intergenic 40.0%
TGTTTGGCAATACGAGAGTA+TGG + chr7_2:71133786-71133805 Msa1073550:CDS 40.0%
!! CCATTTGATGATGTGTCCAT+CGG - chr7_2:71133890-71133909 None:intergenic 40.0%
AGTGTGACAAAGAAAGAGGT+TGG - chr7_2:71133980-71133999 None:intergenic 40.0%
CATGAACAAAGGAATACACG+TGG - chr7_2:71134014-71134033 None:intergenic 40.0%
TGGGAATCAACGTTTGTTTG+GGG - chr7_2:71134432-71134451 None:intergenic 40.0%
GTGGGAATCAACGTTTGTTT+GGG - chr7_2:71134433-71134452 None:intergenic 40.0%
GGGAATCAATATGTGTTCGT+GGG - chr7_2:71134451-71134470 None:intergenic 40.0%
TGGGAATCAATATGTGTTCG+TGG - chr7_2:71134452-71134471 None:intergenic 40.0%
TGTGTTACAGGTCAGTTTGT+GGG - chr7_2:71134471-71134490 None:intergenic 40.0%
TCTCGCACGAATGAGTTAAT+AGG + chr7_2:71134565-71134584 Msa1073550:intron 40.0%
! GTTAAGATGTTGTTTGCGTG+TGG + chr7_2:71135232-71135251 Msa1073550:intron 40.0%
TTCTTCTGTGCTGGATTTGA+AGG - chr7_2:71135625-71135644 None:intergenic 40.0%
CTCTTTCTTACCTCGTTTGA+AGG - chr7_2:71135669-71135688 None:intergenic 40.0%
CTTCAAACGAGGTAAGAAAG+AGG + chr7_2:71135667-71135686 Msa1073550:intron 40.0%
! GAGGGTAATTGCTTCTGAAA+TGG + chr7_2:71135686-71135705 Msa1073550:intron 40.0%
AGCGTTTAGCTGAAAGTTTG+AGG + chr7_2:71135872-71135891 Msa1073550:intron 40.0%
GACAAGGTTCATTTCTAAGC+AGG - chr7_2:71135979-71135998 None:intergenic 40.0%
GGTCTTTAAACCATTAGTGC+TGG - chr7_2:71136003-71136022 None:intergenic 40.0%
GGAAGGCTTCAAAATTTCTC+TGG + chr7_2:71136040-71136059 Msa1073550:intron 40.0%
! ACCAAAGTTGGCTCCTTAAT+TGG + chr7_2:71136122-71136141 Msa1073550:intron 40.0%
! CCAAAGTTGGCTCCTTAATT+GGG + chr7_2:71136123-71136142 Msa1073550:intron 40.0%
! CAAAGTTGGCTCCTTAATTG+GGG + chr7_2:71136124-71136143 Msa1073550:intron 40.0%
GCACTAAGTTTCCCCAATTA+AGG - chr7_2:71136138-71136157 None:intergenic 40.0%
TAGGTGATCTACTTTGGTTG+TGG - chr7_2:71136202-71136221 None:intergenic 40.0%
TCTCTCTAGGTGATCTACTT+TGG - chr7_2:71136208-71136227 None:intergenic 40.0%
AGATCACCTAGAGAGAACTT+CGG + chr7_2:71136212-71136231 Msa1073550:intron 40.0%
TAGAGAGAACTTCGGTTAGA+CGG + chr7_2:71136220-71136239 Msa1073550:intron 40.0%
AACGTTGATCTTGAGCAGAT+TGG - chr7_2:71136271-71136290 None:intergenic 40.0%
AAATGGTCGCCTAATTAGAG+AGG - chr7_2:71136422-71136441 None:intergenic 40.0%
! GATGATGATGTTGATGAGTG+TGG + chr7_2:71136803-71136822 Msa1073550:CDS 40.0%
CTGTGTTTCAACATAGCATC+TGG + chr7_2:71136881-71136900 Msa1073550:CDS 40.0%
TTATGTTGCCGATGCATACA+TGG + chr7_2:71136910-71136929 Msa1073550:CDS 40.0%
TATGTTGCCGATGCATACAT+GGG + chr7_2:71136911-71136930 Msa1073550:CDS 40.0%
AACTAGTCCCATGTATGCAT+CGG - chr7_2:71136921-71136940 None:intergenic 40.0%
TGCAGTAGAAGATCAACCTT+TGG + chr7_2:71136985-71137004 Msa1073550:CDS 40.0%
! CTCATATTTAGAACTGCTGG+AGG - chr7_2:71137062-71137081 None:intergenic 40.0%
TACGTGTCTCTGATTCTAAC+CGG + chr7_2:71137238-71137257 Msa1073550:CDS 40.0%
GGAGTAGCACTTAGCAAAAA+TGG + chr7_2:71137343-71137362 Msa1073550:CDS 40.0%
TGGTTAGAAACACCTAAAGC+TGG + chr7_2:71137415-71137434 Msa1073550:CDS 40.0%
AACACCTAAAGCTGGAACAT+TGG + chr7_2:71137423-71137442 Msa1073550:CDS 40.0%
ACTTCCAATGTTCCAGCTTT+AGG - chr7_2:71137430-71137449 None:intergenic 40.0%
GAAGTCTTTGCTAATCTACC+AGG + chr7_2:71137445-71137464 Msa1073550:CDS 40.0%
TTTATGTTGTCGGGAAAACC+TGG - chr7_2:71137466-71137485 None:intergenic 40.0%
! TGGACTCCGTTTTATGTTGT+CGG - chr7_2:71137476-71137495 None:intergenic 40.0%
AACATAAAACGGAGTCCAAG+AGG + chr7_2:71137478-71137497 Msa1073550:CDS 40.0%
ATTGGCAATTAGGCTAAGTG+AGG + chr7_2:71137648-71137667 Msa1073550:CDS 40.0%
AAGGTCTATTAGTGAGGTTG+AGG + chr7_2:71137717-71137736 Msa1073550:CDS 40.0%
CACCCCAAAACAAGAGAGTT+TGG + chr7_2:71133581-71133600 Msa1073550:five_prime_UTR 45.0%
GAGTCCACAACTGCATCTTA+CGG + chr7_2:71133663-71133682 Msa1073550:CDS 45.0%
AGTCATGAAAACTGCCACGA+CGG - chr7_2:71133692-71133711 None:intergenic 45.0%
! TGGCAGTTTTCATGACTGCA+TGG + chr7_2:71133695-71133714 Msa1073550:CDS 45.0%
GCATGGTTAGCATACAACCA+TGG + chr7_2:71133712-71133731 Msa1073550:CDS 45.0%
CCTTGAATGGTGTAACTCCA+TGG - chr7_2:71133732-71133751 None:intergenic 45.0%
CCATGGAGTTACACCATTCA+AGG + chr7_2:71133729-71133748 Msa1073550:CDS 45.0%
AGTTTCGCCTTTGATCCTCA+CGG + chr7_2:71133841-71133860 Msa1073550:CDS 45.0%
CCGATGGACACATCATCAAA+TGG + chr7_2:71133887-71133906 Msa1073550:CDS 45.0%
CCTGTGTGAAGAAGAAGTGA+CGG - chr7_2:71133944-71133963 None:intergenic 45.0%
GGGAATCAACGTTTGTTTGG+GGG - chr7_2:71134431-71134450 None:intergenic 45.0%
CGTGGGAATCAACGTTTGTT+TGG - chr7_2:71134434-71134453 None:intergenic 45.0%
GTGTGTTACAGGTCAGTTTG+TGG - chr7_2:71134472-71134491 None:intergenic 45.0%
CTTGGGTAGACATGTTTGGT+AGG + chr7_2:71134862-71134881 Msa1073550:intron 45.0%
GAATGTAGGTCCATGTCGAT+TGG + chr7_2:71135008-71135027 Msa1073550:intron 45.0%
ATAGGTCAGTCCAATCGACA+TGG - chr7_2:71135021-71135040 None:intergenic 45.0%
CAAGGGATGGAGATTATTGG+CGG + chr7_2:71135256-71135275 Msa1073550:intron 45.0%
AAGGGATGGAGATTATTGGC+GGG + chr7_2:71135257-71135276 Msa1073550:intron 45.0%
! TGGAAGCTTTTCTTCTGTGC+TGG - chr7_2:71135634-71135653 None:intergenic 45.0%
TGAGCAACGGAATTCGAATC+CGG - chr7_2:71135734-71135753 None:intergenic 45.0%
CGAATTCCGTTGCTCATGAT+TGG + chr7_2:71135738-71135757 Msa1073550:intron 45.0%
GGCAATCCAATCATGAGCAA+CGG - chr7_2:71135747-71135766 None:intergenic 45.0%
!! TTTTAACTCCGCGTCAACAC+AGG - chr7_2:71135938-71135957 None:intergenic 45.0%
AACCTTGTCACCAGCACTAA+TGG + chr7_2:71135990-71136009 Msa1073550:intron 45.0%
!! AACCATTAGTGCTGGTGACA+AGG - chr7_2:71135995-71136014 None:intergenic 45.0%
AAACATACCCCCTGCTTTGA+TGG + chr7_2:71136074-71136093 Msa1073550:intron 45.0%
AACATACCCCCTGCTTTGAT+GGG + chr7_2:71136075-71136094 Msa1073550:intron 45.0%
! AACTTTGGTTCCACAACACG+AGG - chr7_2:71136111-71136130 None:intergenic 45.0%
TCGTGTTGTGGAACCAAAGT+TGG + chr7_2:71136110-71136129 Msa1073550:intron 45.0%
CCCAATTAAGGAGCCAACTT+TGG - chr7_2:71136126-71136145 None:intergenic 45.0%
GCCAAGGAATGTTGAGAAAG+AGG + chr7_2:71136173-71136192 Msa1073550:intron 45.0%
GCCTCTTTCTCAACATTCCT+TGG - chr7_2:71136177-71136196 None:intergenic 45.0%
GTCTAACCGAAGTTCTCTCT+AGG - chr7_2:71136221-71136240 None:intergenic 45.0%
GTCACCACCATCAATAGTCT+CGG - chr7_2:71136249-71136268 None:intergenic 45.0%
TGCTCAAGATCAACGTTCGT+AGG + chr7_2:71136274-71136293 Msa1073550:intron 45.0%
CACAACGCTAACTACCTGAT+TGG - chr7_2:71136322-71136341 None:intergenic 45.0%
CAATCAGGTAGTTAGCGTTG+TGG + chr7_2:71136320-71136339 Msa1073550:intron 45.0%
!! TGATACGGTTGATTTGGCAG+AGG + chr7_2:71136779-71136798 Msa1073550:intron 45.0%
! GATGATGTTGATGAGTGTGG+AGG + chr7_2:71136806-71136825 Msa1073550:CDS 45.0%
TGTTGAAACACAGCCCAAGT+GGG - chr7_2:71136874-71136893 None:intergenic 45.0%
ATGTTGAAACACAGCCCAAG+TGG - chr7_2:71136875-71136894 None:intergenic 45.0%
! CTAGTTGTTATTGAGCCCAC+TGG + chr7_2:71136935-71136954 Msa1073550:CDS 45.0%
! TTTCTAGCAATGCCACCAGT+GGG - chr7_2:71136953-71136972 None:intergenic 45.0%
!! TTTTCTAGCAATGCCACCAG+TGG - chr7_2:71136954-71136973 None:intergenic 45.0%
ATTCTAACCGGTGACAACTC+AGG + chr7_2:71137250-71137269 Msa1073550:CDS 45.0%
TTCTAACCGGTGACAACTCA+GGG + chr7_2:71137251-71137270 Msa1073550:CDS 45.0%
! GGACTCCGTTTTATGTTGTC+GGG - chr7_2:71137475-71137494 None:intergenic 45.0%
ATAAAACGGAGTCCAAGAGG+AGG + chr7_2:71137481-71137500 Msa1073550:CDS 45.0%
! GAGTCCAAGAGGAGGATTTT+GGG + chr7_2:71137489-71137508 Msa1073550:CDS 45.0%
TCCTTGGATAGGAAAAGGGT+TGG + chr7_2:71137561-71137580 Msa1073550:CDS 45.0%
! ACCAACCCTTTTCCTATCCA+AGG - chr7_2:71137565-71137584 None:intergenic 45.0%
!! GGAGTACTGGATTGGCAATT+AGG + chr7_2:71137638-71137657 Msa1073550:CDS 45.0%
GCAATTAGGCTAAGTGAGGA+GGG + chr7_2:71137652-71137671 Msa1073550:CDS 45.0%
AGTGAGGTTGAGGAAAGAGA+TGG + chr7_2:71137727-71137746 Msa1073550:CDS 45.0%
GTGAGGTTGAGGAAAGAGAT+GGG + chr7_2:71137728-71137747 Msa1073550:CDS 45.0%
TGAGGTTGAGGAAAGAGATG+GGG + chr7_2:71137729-71137748 Msa1073550:CDS 45.0%
!! TGTAATATAATTAAAATAAA+AGG - chr7_2:71134654-71134673 None:intergenic 5.0%
!! CAATTAAAAAATATTAAATT+TGG - chr7_2:71136446-71136465 None:intergenic 5.0%
CCAAACATCGGAAACTCCGA+AGG - chr7_2:71133773-71133792 None:intergenic 50.0%
CCTTCGGAGTTTCCGATGTT+TGG + chr7_2:71133770-71133789 Msa1073550:CDS 50.0%
CCAACGGCACCGTTATCAAT+CGG - chr7_2:71133814-71133833 None:intergenic 50.0%
GGATCAAAGGCGAAACTCTC+CGG - chr7_2:71133838-71133857 None:intergenic 50.0%
TCCTTCACCGTGAGGATCAA+AGG - chr7_2:71133851-71133870 None:intergenic 50.0%
GTATAAGGTCCTTCACCGTG+AGG - chr7_2:71133859-71133878 None:intergenic 50.0%
CACGGTGAAGGACCTTATAC+CGG + chr7_2:71133859-71133878 Msa1073550:CDS 50.0%
CCATCGGAAACTCCGGTATA+AGG - chr7_2:71133874-71133893 None:intergenic 50.0%
CCTTATACCGGAGTTTCCGA+TGG + chr7_2:71133871-71133890 Msa1073550:CDS 50.0%
GATGTGTCCATCGGAAACTC+CGG - chr7_2:71133881-71133900 None:intergenic 50.0%
GCACCGTCATCAGAACCATT+GGG + chr7_2:71133909-71133928 Msa1073550:CDS 50.0%
!! CCACCCAATGGTTCTGATGA+CGG - chr7_2:71133915-71133934 None:intergenic 50.0%
CCGTCACTTCTTCTTCACAC+AGG + chr7_2:71133941-71133960 Msa1073550:CDS 50.0%
AAATGTATTCAGGGAGGGCC+AGG + chr7_2:71134157-71134176 Msa1073550:intron 50.0%
AATGTATTCAGGGAGGGCCA+GGG + chr7_2:71134158-71134177 Msa1073550:intron 50.0%
! ATGTTGTTTGCGTGTGGGCA+AGG + chr7_2:71135238-71135257 Msa1073550:intron 50.0%
! TGTTGTTTGCGTGTGGGCAA+GGG + chr7_2:71135239-71135258 Msa1073550:intron 50.0%
GGGCAAGGGATGGAGATTAT+TGG + chr7_2:71135253-71135272 Msa1073550:intron 50.0%
AGGGATGGAGATTATTGGCG+GGG + chr7_2:71135258-71135277 Msa1073550:intron 50.0%
TGAGGTCGGCCAATAGCTAA+AGG + chr7_2:71135890-71135909 Msa1073550:intron 50.0%
! CAACTCAACCTGTGTTGACG+CGG + chr7_2:71135927-71135946 Msa1073550:intron 50.0%
ACGGCTACCGAGACTATTGA+TGG + chr7_2:71136239-71136258 Msa1073550:intron 50.0%
GCTACCGAGACTATTGATGG+TGG + chr7_2:71136242-71136261 Msa1073550:intron 50.0%
TGAGTGTGGAGGACCATACA+AGG + chr7_2:71136817-71136836 Msa1073550:CDS 50.0%
! GTTGTTATTGAGCCCACTGG+TGG + chr7_2:71136938-71136957 Msa1073550:CDS 50.0%
! GGAGTCCAAGAGGAGGATTT+TGG + chr7_2:71137488-71137507 Msa1073550:CDS 50.0%
CCAACCCAAAATCCTCCTCT+TGG - chr7_2:71137496-71137515 None:intergenic 50.0%
!! CCAAGAGGAGGATTTTGGGT+TGG + chr7_2:71137493-71137512 Msa1073550:CDS 50.0%
! GCTAAGGTGAAAGGGAGTAC+TGG + chr7_2:71137625-71137644 Msa1073550:CDS 50.0%
!! GGTGAAAGGGAGTACTGGAT+TGG + chr7_2:71137630-71137649 Msa1073550:CDS 50.0%
GGCAATTAGGCTAAGTGAGG+AGG + chr7_2:71137651-71137670 Msa1073550:CDS 50.0%
AAGTGAGGAGGGTGATGTGT+TGG + chr7_2:71137663-71137682 Msa1073550:CDS 50.0%
!! AGGAAAGAGATGGGGTACTG+TGG + chr7_2:71137737-71137756 Msa1073550:CDS 50.0%
!! GGAAAGAGATGGGGTACTGT+GGG + chr7_2:71137738-71137757 Msa1073550:CDS 50.0%
GCTGCCGTAAGATGCAGTTG+TGG - chr7_2:71133670-71133689 None:intergenic 55.0%
!! CCGATTGATAACGGTGCCGT+TGG + chr7_2:71133811-71133830 Msa1073550:CDS 55.0%
!! TGATAACGGTGCCGTTGGAC+CGG + chr7_2:71133816-71133835 Msa1073550:CDS 55.0%
GCCTTTGATCCTCACGGTGA+AGG + chr7_2:71133847-71133866 Msa1073550:CDS 55.0%
GGCACCGTCATCAGAACCAT+TGG + chr7_2:71133908-71133927 Msa1073550:CDS 55.0%
CCGTCATCAGAACCATTGGG+TGG + chr7_2:71133912-71133931 Msa1073550:CDS 55.0%
TGACGGCAAAGTCCACCCAA+TGG - chr7_2:71133927-71133946 None:intergenic 55.0%
! CGCGTCAACACAGGTTGAGT+TGG - chr7_2:71135929-71135948 None:intergenic 55.0%
CCACAACACGAGGATGCGTT+GGG - chr7_2:71136101-71136120 None:intergenic 55.0%
TCCACAACACGAGGATGCGT+TGG - chr7_2:71136102-71136121 None:intergenic 55.0%
!! CTTCTAGAATCGACGCGCCA+AGG + chr7_2:71136157-71136176 Msa1073550:intron 55.0%
ACATATGTGGGCGCCCACTT+GGG + chr7_2:71136858-71136877 Msa1073550:CDS 55.0%
TAACCGGTGACAACTCAGGG+AGG + chr7_2:71137254-71137273 Msa1073550:CDS 55.0%
TAGCCTCCCTGAGTTGTCAC+CGG - chr7_2:71137260-71137279 None:intergenic 55.0%
!! AGAGATGGGGTACTGTGGGT+TGG + chr7_2:71137742-71137761 Msa1073550:CDS 55.0%
GGCGAAACTCTCCGGTCCAA+CGG - chr7_2:71133830-71133849 None:intergenic 60.0%
GTTTGCGTGTGGGCAAGGGA+TGG + chr7_2:71135243-71135262 Msa1073550:intron 60.0%
GTTGGGCCCATCAAAGCAGG+GGG - chr7_2:71136084-71136103 None:intergenic 60.0%
CGTTGGGCCCATCAAAGCAG+GGG - chr7_2:71136085-71136104 None:intergenic 60.0%
GCGTTGGGCCCATCAAAGCA+GGG - chr7_2:71136086-71136105 None:intergenic 60.0%
TGCGTTGGGCCCATCAAAGC+AGG - chr7_2:71136087-71136106 None:intergenic 60.0%
CCCAACGCATCCTCGTGTTG+TGG + chr7_2:71136098-71136117 Msa1073550:intron 60.0%
CACATATGTGGGCGCCCACT+TGG + chr7_2:71136857-71136876 Msa1073550:CDS 60.0%
GCATCTTACGGCAGCCGTCG+TGG + chr7_2:71133675-71133694 Msa1073550:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 71133564 71137877 71133564 ID=Msa1073550;Name=Msa1073550
chr7_2 mRNA 71133564 71137877 71133564 ID=Msa1073550-mRNA-1;Parent=Msa1073550;Name=Msa1073550-mRNA-1;_AED=0.40;_eAED=0.40;_QI=97|1|1|1|1|1|3|52|393
chr7_2 exon 71133564 71133962 71133564 ID=Msa1073550-mRNA-1:exon:16104;Parent=Msa1073550-mRNA-1
chr7_2 exon 71136799 71137086 71136799 ID=Msa1073550-mRNA-1:exon:16105;Parent=Msa1073550-mRNA-1
chr7_2 exon 71137234 71137877 71137234 ID=Msa1073550-mRNA-1:exon:16106;Parent=Msa1073550-mRNA-1
chr7_2 five_prime_UTR 71133564 71133660 71133564 ID=Msa1073550-mRNA-1:five_prime_utr;Parent=Msa1073550-mRNA-1
chr7_2 CDS 71133661 71133962 71133661 ID=Msa1073550-mRNA-1:cds;Parent=Msa1073550-mRNA-1
chr7_2 CDS 71136799 71137086 71136799 ID=Msa1073550-mRNA-1:cds;Parent=Msa1073550-mRNA-1
chr7_2 CDS 71137234 71137825 71137234 ID=Msa1073550-mRNA-1:cds;Parent=Msa1073550-mRNA-1
chr7_2 three_prime_UTR 71137826 71137877 71137826 ID=Msa1073550-mRNA-1:three_prime_utr;Parent=Msa1073550-mRNA-1
Gene Sequence

>Msa1073550

ATGAGTCCACAACTGCATCTTACGGCAGCCGTCGTGGCAGTTTTCATGACTGCATGGTTAGCATACAACCATGGAGTTACACCATTCAAGGATGTCACAGAAACATCAACCTTCGGAGTTTCCGATGTTTGGCAATACGAGAGTATGGTTCCGATTGATAACGGTGCCGTTGGACCGGAGAGTTTCGCCTTTGATCCTCACGGTGAAGGACCTTATACCGGAGTTTCCGATGGACACATCATCAAATGGCACCGTCATCAGAACCATTGGGTGGACTTTGCCGTCACTTCTTCTTCACACAGAGGTGATGATGATGTTGATGAGTGTGGAGGACCATACAAGGAGCATCCAAAAAAAGAACACATATGTGGGCGCCCACTTGGGCTGTGTTTCAACATAGCATCTGGTCAACTTTATGTTGCCGATGCATACATGGGACTAGTTGTTATTGAGCCCACTGGTGGCATTGCTAGAAAAGTCATATCACATGCAGTAGAAGATCAACCTTTGGCTTTCACAAACAGTTTGGATATTGATCAACGAACTGGAGTAGTGTACTTTACCTCCAGCAGTTCTAAATATGAGAGAAGGAATTACGTGTCTCTGATTCTAACCGGTGACAACTCAGGGAGGCTAATAAAATATGAACCAAAAAGTGAACAAGTCAATGTTCTTCTAAACAATCTCACATTTGCAAATGGAGTAGCACTTAGCAAAAATGGTAACTATATTCTAATATCGGAGACTACAAAATGTAGAATATTAAGGTATTGGTTAGAAACACCTAAAGCTGGAACATTGGAAGTCTTTGCTAATCTACCAGGTTTTCCCGACAACATAAAACGGAGTCCAAGAGGAGGATTTTGGGTTGGAATCAACTCAAGAAGAGAAAAATTTATTCAATGGATGCTATCATATCCTTGGATAGGAAAAGGGTTGGTTATGCTTCCTTTAGACATAACAAAAACTTATTCATATTTGGCTAAGGTGAAAGGGAGTACTGGATTGGCAATTAGGCTAAGTGAGGAGGGTGATGTGTTGGAAATTGTTGAAGATCATAGTAGTGGTAATAGAAGGTCTATTAGTGAGGTTGAGGAAAGAGATGGGGTACTGTGGGTTGGATCAGTTGATGCACCTTTTGTTATTAAGTATAACAATTCTTGTGGCGCAAGCATAAAGTAA

Protein sequence

>Msa1073550

MSPQLHLTAAVVAVFMTAWLAYNHGVTPFKDVTETSTFGVSDVWQYESMVPIDNGAVGPESFAFDPHGEGPYTGVSDGHIIKWHRHQNHWVDFAVTSSSHRGDDDVDECGGPYKEHPKKEHICGRPLGLCFNIASGQLYVADAYMGLVVIEPTGGIARKVISHAVEDQPLAFTNSLDIDQRTGVVYFTSSSSKYERRNYVSLILTGDNSGRLIKYEPKSEQVNVLLNNLTFANGVALSKNGNYILISETTKCRILRYWLETPKAGTLEVFANLPGFPDNIKRSPRGGFWVGINSRREKFIQWMLSYPWIGKGLVMLPLDITKTYSYLAKVKGSTGLAIRLSEEGDVLEIVEDHSSGNRRSISEVEERDGVLWVGSVDAPFVIKYNNSCGASIK*