AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1331400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331400 MtrunA17_Chr4g0062121 97.959 392 8 0 1 392 1 392 0.0 769
Msa1331400 MtrunA17_Chr4g0062521 92.810 153 8 1 3 155 1 150 1.37e-90 270
Msa1331400 MtrunA17_Chr4g0062141 89.510 143 15 0 1 143 1 143 6.31e-82 247
Msa1331400 MtrunA17_Chr3g0121591 29.012 162 102 3 189 349 318 467 6.77e-17 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331400 AT5G23060.1 69.565 391 109 6 7 392 2 387 0.0 538
Msa1331400 AT5G23060.2 69.355 310 89 4 7 311 2 310 4.24e-150 427
Msa1331400 AT3G59780.1 29.630 162 101 4 189 349 376 525 3.09e-17 84.0

Find 117 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGTTCAGGTGGTTGGTTC+TGG 0.203917 8_4:-50906497 Msa1331400:CDS
CACGAGTGGAAGAGTTTAAA+AGG 0.233890 8_4:+50903789 None:intergenic
AAGTGCTTCTTGAGCCTTCT+TGG 0.258220 8_4:+50906337 None:intergenic
ACCTCTTGTTTCCTCCTATC+TGG 0.273177 8_4:-50905162 Msa1331400:CDS
GCAGGTGTTAGAGGAGGTTT+TGG 0.305441 8_4:-50903979 Msa1331400:CDS
ATAGTTGCTAGAACACTAAC+AGG 0.310201 8_4:-50904135 Msa1331400:CDS
AACACCTGCAGGGATGATTC+TGG 0.312131 8_4:+50903993 None:intergenic
GAGTGATAATAAGGTGAGTT+AGG 0.333132 8_4:+50903589 None:intergenic
ACAGCAGCTTTAGCTTCATT+TGG 0.355028 8_4:+50906671 None:intergenic
CAAGAAGCACTTCAAAGTTC+TGG 0.357902 8_4:-50906326 Msa1331400:CDS
TCAGATCCTACCGTGATTGC+TGG 0.363406 8_4:-50905211 Msa1331400:CDS
TGTCCAGCCTGCTGCACAAT+TGG 0.364015 8_4:+50906401 None:intergenic
ATACACATGGAGTGATAATA+AGG 0.367130 8_4:+50903580 None:intergenic
ATCATCCCTGCAGGTGTTAG+AGG 0.379861 8_4:-50903988 Msa1331400:CDS
AGCAAACCTTAGCAGCTGTT+TGG 0.394647 8_4:+50906294 None:intergenic
AGAAGAAACAATTTGGTCCT+TGG 0.396949 8_4:+50906640 None:intergenic
AGGCACCAACATTGTGATCT+TGG 0.398969 8_4:-50904501 Msa1331400:CDS
TTCGAGGATTTGATTAATCA+AGG 0.402759 8_4:+50903852 None:intergenic
TCCATGGTTGATGAGGCTAT+TGG 0.405151 8_4:+50905247 None:intergenic
TTTAGTTGTATCCGATATGA+TGG 0.406304 8_4:+50903710 None:intergenic
TCTACTCAGAAACTTCTTCC+TGG 0.410143 8_4:-50903940 Msa1331400:CDS
TTTAATGGTGGTTATAATGA+AGG 0.411666 8_4:-50903667 Msa1331400:three_prime_UTR
GCAGACTATTGATCAGGTTC+AGG 0.429751 8_4:-50906510 Msa1331400:CDS
GTAGGGAGTGCTTTGAAGCC+TGG 0.435558 8_4:-50906440 Msa1331400:CDS
AAGAAGTTCCAAACAAAATA+CGG 0.440195 8_4:-50904601 Msa1331400:CDS
ACCGTGATTGCTGGAACAGC+TGG 0.442811 8_4:-50905202 Msa1331400:CDS
GGCGTTGCCAATTGTGCAGC+AGG 0.443721 8_4:-50906408 Msa1331400:CDS
TTTGTAACCGCGAAAATTGA+AGG 0.446381 8_4:+50905129 None:intergenic
CTTGGCACCTTCAATCACCT+TGG 0.446939 8_4:+50905270 None:intergenic
TTCCACTCGTGTACGCTTAG+TGG 0.450496 8_4:-50903777 Msa1331400:three_prime_UTR
GGGTGAGAGAAGAAACAATT+TGG 0.450976 8_4:+50906633 None:intergenic
GGGTGGTTACAGAGTAGATT+AGG 0.455550 8_4:-50904060 Msa1331400:CDS
TTGCCAATTGTGCAGCAGGC+TGG 0.458405 8_4:-50906404 Msa1331400:CDS
GAAGAGAGCAAGTAGTGAAA+TGG 0.460147 8_4:+50906700 None:intergenic
GCAGCTTTAGCTTCATTTGG+AGG 0.465654 8_4:+50906674 None:intergenic
ATTGATCAGGTTCAGGTGGT+TGG 0.466359 8_4:-50906503 Msa1331400:CDS
AGATGGAAGGCGAGGAATAC+CGG 0.469370 8_4:+50904899 None:intergenic
CTACTCAGAAACTTCTTCCT+GGG 0.474253 8_4:-50903939 Msa1331400:CDS
ACAAAATACGGGGACTGGTA+AGG 0.484660 8_4:-50904589 Msa1331400:CDS
CTTCTCTGTGGCTTCCAAGA+AGG 0.491248 8_4:-50906351 Msa1331400:CDS
CAGCTTTAGCTTCATTTGGA+GGG 0.498069 8_4:+50906675 None:intergenic
GCTAGAACACTAACAGGGCT+TGG 0.499873 8_4:-50904129 Msa1331400:CDS
TTGGAAGCCACAGAGAAGGC+TGG 0.503167 8_4:+50906356 None:intergenic
GGTGATTGTGTGAGGTAAAG+TGG 0.504202 8_4:+50906772 None:intergenic
CATTGTTAGTTGCTAGTGGT+TGG 0.506706 8_4:+50906856 None:intergenic
TGATATCCAAACAGCTGCTA+AGG 0.507510 8_4:-50906300 Msa1331400:intron
GAGAAGGATAAGGACAAATC+CGG 0.507918 8_4:-50904918 Msa1331400:CDS
TTAGTTGTATCCGATATGAT+GGG 0.508907 8_4:+50903711 None:intergenic
GGTGGAGCAGACTATTGATC+AGG 0.509180 8_4:-50906516 Msa1331400:CDS
TGATGAAGTTATAGTTTCCA+TGG 0.511224 8_4:+50905231 None:intergenic
CAAACAACCAAGGTGATTGA+AGG 0.517430 8_4:-50905277 Msa1331400:CDS
AAGGAGATGGCAGACCAGAT+AGG 0.519818 8_4:+50905148 None:intergenic
AAACCTCCTCTAACACCTGC+AGG 0.519952 8_4:+50903982 None:intergenic
GGTTGATGAGGCTATTGGCT+TGG 0.522150 8_4:+50905252 None:intergenic
GGTAAGGAATGTGAAGAGAG+TGG 0.527256 8_4:-50904573 Msa1331400:CDS
TTTCTGAGTAGATTGCCTGC+TGG 0.527852 8_4:+50903951 None:intergenic
GTGGAAGGAGATGGAAGTGA+AGG 0.528700 8_4:+50906791 None:intergenic
TGTTGTTGGTAGTGAAGCCA+TGG 0.530089 8_4:+50906817 None:intergenic
AGTGATAATAAGGTGAGTTA+GGG 0.530343 8_4:+50903590 None:intergenic
AGCTTTAGCTTCATTTGGAG+GGG 0.530864 8_4:+50906676 None:intergenic
CAACGTGTTGCTGAAGCTGT+AGG 0.541146 8_4:-50906458 Msa1331400:CDS
AGAAGTTCCAAACAAAATAC+GGG 0.543009 8_4:-50904600 Msa1331400:CDS
TCCAAACAAAATACGGGGAC+TGG 0.544882 8_4:-50904594 Msa1331400:CDS
GATTGATATTAGGTCAGAGA+AGG 0.545508 8_4:-50904934 Msa1331400:CDS
TTTGAAGCCTGGCTTTGATA+CGG 0.546314 8_4:-50906429 Msa1331400:CDS
AACACATGGATCGTTGGTGA+TGG 0.547381 8_4:-50904099 Msa1331400:CDS
CCATCCAGAATCATCCCTGC+AGG 0.548259 8_4:-50903997 Msa1331400:CDS
TAGTTGTATCCGATATGATG+GGG 0.548264 8_4:+50903712 None:intergenic
TGAGGTAAAGTGGAAGGAGA+TGG 0.548724 8_4:+50906782 None:intergenic
ACGAGTGGAAGAGTTTAAAA+GGG 0.549823 8_4:+50903790 None:intergenic
GGCAACGCCGTATCAAAGCC+AGG 0.554772 8_4:+50906422 None:intergenic
TTTAAGAACACATGGATCGT+TGG 0.558923 8_4:-50904105 Msa1331400:CDS
TTGCCATTGTTAGTTGCTAG+TGG 0.561348 8_4:+50906852 None:intergenic
TATAGTTTCCATGGTTGATG+AGG 0.563496 8_4:+50905240 None:intergenic
TATTAGGTCAGAGAAGGATA+AGG 0.566526 8_4:-50904928 Msa1331400:CDS
AACGTGTTGCTGAAGCTGTA+GGG 0.570064 8_4:-50906457 Msa1331400:CDS
AACATATCAAGTGTTTGAGC+TGG 0.570805 8_4:+50904978 None:intergenic
GACTATTGATCAGGTTCAGG+TGG 0.574947 8_4:-50906507 Msa1331400:CDS
GGCAATGGAGATTACAGCCA+TGG 0.575193 8_4:-50906834 Msa1331400:CDS
ACCGCGAAAATTGAAGGAGA+TGG 0.577820 8_4:+50905135 None:intergenic
AGTGAAATGGTGGTTGATGT+TGG 0.580317 8_4:+50906713 None:intergenic
TCCAGCTGTTCCAGCAATCA+CGG 0.582295 8_4:+50905201 None:intergenic
AAAGAATCTCAATCAGCCCC+AGG 0.594925 8_4:+50903922 None:intergenic
GGCTTGGATTTAAGAACACA+TGG 0.597465 8_4:-50904113 Msa1331400:CDS
CTAGCAACTAACAATGGCAA+TGG 0.598628 8_4:-50906849 Msa1331400:exon
TGTGCAGCAGGCTGGACAAG+AGG 0.599418 8_4:-50906396 Msa1331400:CDS
AGTTGTATCCGATATGATGG+GGG 0.599944 8_4:+50903713 None:intergenic
CGAGTCCAAGATCACAATGT+TGG 0.602753 8_4:+50904496 None:intergenic
GCCAATAGCCTCATCAACCA+TGG 0.605727 8_4:-50905248 Msa1331400:CDS
TGCTTCTCCAGCCTTCTCTG+TGG 0.609400 8_4:-50906363 Msa1331400:CDS
ATCCCTGCAGGTGTTAGAGG+AGG 0.609899 8_4:-50903985 Msa1331400:CDS
CTTCTTGGAAGCCACAGAGA+AGG 0.611514 8_4:+50906352 None:intergenic
GCTGTTCCAGCAATCACGGT+AGG 0.613560 8_4:+50905205 None:intergenic
GAGAGCAAGTAGTGAAATGG+TGG 0.617797 8_4:+50906703 None:intergenic
AAGAAGGTGGTGATTGTGTG+AGG 0.618393 8_4:+50906764 None:intergenic
AGCCACTAAGCGTACACGAG+TGG 0.620651 8_4:+50903775 None:intergenic
TTGCAATCCCCTAAAACTAG+TGG 0.625194 8_4:-50903740 Msa1331400:three_prime_UTR
AGCTGCTGTTAACATCTCCA+AGG 0.626049 8_4:-50906657 Msa1331400:CDS
GAGATGGCAGACCAGATAGG+AGG 0.635679 8_4:+50905151 None:intergenic
AATGATATGCGTCTATGTTG+AGG 0.636496 8_4:+50906737 None:intergenic
AACCTCCTCTAACACCTGCA+GGG 0.638263 8_4:+50903983 None:intergenic
TGAGAGATCAATGTTGAGTG+AGG 0.640545 8_4:+50903897 None:intergenic
TACTCAGAAACTTCTTCCTG+GGG 0.647418 8_4:-50903938 Msa1331400:CDS
CAACCACTAGCAACTAACAA+TGG 0.650476 8_4:-50906855 Msa1331400:exon
GTTGTATCCGATATGATGGG+GGG 0.660352 8_4:+50903714 None:intergenic
TTTAATGTCAAGTATACACA+TGG 0.665002 8_4:+50903567 None:intergenic
TAGGGATTAGACTGATAACA+AGG 0.665432 8_4:+50903632 None:intergenic
TATCTGAAGAAAATCAACAA+AGG 0.667456 8_4:-50904521 Msa1331400:CDS
ATTGTGTGAGGTAAAGTGGA+AGG 0.668375 8_4:+50906776 None:intergenic
ACCAGATAGGAGGAAACAAG+AGG 0.669558 8_4:+50905161 None:intergenic
ATACGTATAATATAGGTACT+CGG 0.671241 8_4:-50904169 Msa1331400:intron
TTAGCACTAGATGGAAGGCG+AGG 0.681162 8_4:+50904891 None:intergenic
TTGATGATAGAAGAGTGAAG+TGG 0.684018 8_4:+50906879 None:intergenic
TGCTGCACAACAAACAACCA+AGG 0.684435 8_4:-50905287 Msa1331400:CDS
CCTGCAGGGATGATTCTGGA+TGG 0.685866 8_4:+50903997 None:intergenic
TAGTTGCTAGAACACTAACA+GGG 0.734014 8_4:-50904134 Msa1331400:CDS
GAAGTTCCAAACAAAATACG+GGG 0.754138 8_4:-50904599 Msa1331400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTGTTTTTTTTTTTTTTT+TGG + chr8_4:50903678-50903697 None:intergenic 10.0%
!!! ATGCATTTTTATTATTATAT+AGG - chr8_4:50904048-50904067 Msa1331400:CDS 10.0%
!! AAAAAAAAAAAAAAGATGTG+TGG + chr8_4:50903615-50903634 None:intergenic 15.0%
!!! TGTTTTTTTTTTTTTTTTGG+AGG + chr8_4:50903675-50903694 None:intergenic 15.0%
!!! CATTTTTATTATTATATAGG+TGG - chr8_4:50904051-50904070 Msa1331400:CDS 15.0%
!! AGTTAAATTTATTATCCAAA+CGG + chr8_4:50904343-50904362 None:intergenic 15.0%
!!! TACTTAACTTATTAACTTTT+TGG - chr8_4:50906308-50906327 Msa1331400:CDS 15.0%
!!! ACTTAACTTATTAACTTTTT+GGG - chr8_4:50906309-50906328 Msa1331400:CDS 15.0%
!!! ATCAAATTAATATATTTTCG+AGG + chr8_4:50906752-50906771 None:intergenic 15.0%
!! TTTGAAAGAAAAACTTACTT+GGG + chr8_4:50903975-50903994 None:intergenic 20.0%
!!! TTTATGTCTTTGGTTTTATA+TGG - chr8_4:50904804-50904823 Msa1331400:intron 20.0%
!! TACACATCTTAAATCAATTA+TGG + chr8_4:50905125-50905144 None:intergenic 20.0%
!! ATCAGATTGATAAATTAACT+TGG + chr8_4:50905245-50905264 None:intergenic 20.0%
!! GTTAATTTATCAATCTGATT+CGG - chr8_4:50905246-50905265 Msa1331400:CDS 20.0%
!!! AAACAACATTTTTCTTTCTT+TGG - chr8_4:50905549-50905568 Msa1331400:intron 20.0%
!!! ACTACATTTTGATTGATATT+AGG - chr8_4:50905641-50905660 Msa1331400:intron 20.0%
!! AAGTTTATTACAATGAGTAT+AGG + chr8_4:50905890-50905909 None:intergenic 20.0%
!! AATAGTAAGATAGATTTGAA+AGG + chr8_4:50906122-50906141 None:intergenic 20.0%
!! TTAACACTAAAAAGAAAGTT+AGG + chr8_4:50906375-50906394 None:intergenic 20.0%
!! CTTTGAAAGAAAAACTTACT+TGG + chr8_4:50903976-50903995 None:intergenic 25.0%
!!! AAAATGCATTTCGAGTTAAA+GGG + chr8_4:50904037-50904056 None:intergenic 25.0%
!!! AAAAATGCATTTCGAGTTAA+AGG + chr8_4:50904038-50904057 None:intergenic 25.0%
! AACTTATATTCATAGCTCTT+CGG + chr8_4:50904483-50904502 None:intergenic 25.0%
!! TTCTTTTTATAAGCTCTTTC+AGG - chr8_4:50904530-50904549 Msa1331400:CDS 25.0%
!!! TATTTGAGACCAATTTTATC+CGG - chr8_4:50904621-50904640 Msa1331400:intron 25.0%
! ATTATCAATCCGGATAAAAT+TGG + chr8_4:50904633-50904652 None:intergenic 25.0%
!!! GCAATGTTTGTTAACTTTTA+GGG - chr8_4:50904687-50904706 Msa1331400:intron 25.0%
!! AATGTGCCAAATAAACTTTT+CGG - chr8_4:50904757-50904776 Msa1331400:intron 25.0%
! CTTGAGAATATTCAAATATG+TGG + chr8_4:50905158-50905177 None:intergenic 25.0%
!! GAAAAATGTTGTTTGACATA+AGG + chr8_4:50905543-50905562 None:intergenic 25.0%
! AATTTGTATTTAGATTCTCG+TGG - chr8_4:50905773-50905792 Msa1331400:intron 25.0%
! ATAATAACTGATCATAACGA+AGG + chr8_4:50905854-50905873 None:intergenic 25.0%
! AAGAAGTTCCAAACAAAATA+CGG - chr8_4:50905984-50906003 Msa1331400:intron 25.0%
! TATCTGAAGAAAATCAACAA+AGG - chr8_4:50906064-50906083 Msa1331400:intron 25.0%
!! ATCATTTTCAGTTCACTATA+TGG - chr8_4:50906147-50906166 Msa1331400:intron 25.0%
! TTTCTCAAATTATCAAGTGT+CGG + chr8_4:50906212-50906231 None:intergenic 25.0%
!! GTTAATCAACTTCTGATTTT+TGG - chr8_4:50906390-50906409 Msa1331400:CDS 25.0%
! TTGGACAATACGTATAATAT+AGG - chr8_4:50906409-50906428 Msa1331400:CDS 25.0%
! ATACGTATAATATAGGTACT+CGG - chr8_4:50906416-50906435 Msa1331400:CDS 25.0%
!!! TCAAGCTCAATGTTTTTTAA+TGG - chr8_4:50906903-50906922 Msa1331400:five_prime_UTR 25.0%
! TTTAATGGTGGTTATAATGA+AGG - chr8_4:50906918-50906937 Msa1331400:intron 25.0%
! TTTAATGTCAAGTATACACA+TGG + chr8_4:50907021-50907040 None:intergenic 25.0%
TACAAGGTGAACATAAAAAG+TGG - chr8_4:50903570-50903589 Msa1331400:three_prime_UTR 30.0%
!!! TTTTTTTTTGGAGGAGTGTT+TGG + chr8_4:50903666-50903685 None:intergenic 30.0%
!!! TCTATGTTGAGGTTTTAAGA+AGG + chr8_4:50903840-50903859 None:intergenic 30.0%
TTGCTTAATTCATTCAGTCT+TGG - chr8_4:50904309-50904328 Msa1331400:intron 30.0%
TGCTTAATTCATTCAGTCTT+GGG - chr8_4:50904310-50904329 Msa1331400:intron 30.0%
ACTTATATTCATAGCTCTTC+GGG + chr8_4:50904482-50904501 None:intergenic 30.0%
AGCAAATGTCATTATCAATC+CGG + chr8_4:50904643-50904662 None:intergenic 30.0%
!! ATTGATAATGACATTTGCTC+TGG - chr8_4:50904644-50904663 Msa1331400:intron 30.0%
!! GGCAATGTTTGTTAACTTTT+AGG - chr8_4:50904686-50904705 Msa1331400:intron 30.0%
TTGGATCCGAAAAGTTTATT+TGG + chr8_4:50904766-50904785 None:intergenic 30.0%
! AAGAGTGTGTTTATGGAATT+TGG + chr8_4:50904785-50904804 None:intergenic 30.0%
! GACATAAAAGAGTGTGTTTA+TGG + chr8_4:50904792-50904811 None:intergenic 30.0%
! AACACACTCTTTTATGTCTT+TGG - chr8_4:50904794-50904813 Msa1331400:intron 30.0%
TGGATAGAAAGCAATTATGA+GGG - chr8_4:50904834-50904853 Msa1331400:intron 30.0%
AACATTTATCCACTCACTAA+GGG + chr8_4:50904919-50904938 None:intergenic 30.0%
AAACATTTATCCACTCACTA+AGG + chr8_4:50904920-50904939 None:intergenic 30.0%
! TACAAGACATAGAATTTGCT+TGG - chr8_4:50905082-50905101 Msa1331400:intron 30.0%
CAAGTTAGAATCAATTCTGA+AGG + chr8_4:50905195-50905214 None:intergenic 30.0%
!! ATCATCATTGATTTAGACAG+TGG - chr8_4:50905271-50905290 Msa1331400:CDS 30.0%
TGATGAAGTTATAGTTTCCA+TGG + chr8_4:50905357-50905376 None:intergenic 30.0%
! GCAAATTTTGTGCTTCTATA+TGG - chr8_4:50905507-50905526 Msa1331400:intron 30.0%
!!! ATCTTGTTTTTAGCACTAGA+TGG + chr8_4:50905706-50905725 None:intergenic 30.0%
ATCTAGTGCTAAAAACAAGA+TGG - chr8_4:50905705-50905724 Msa1331400:intron 30.0%
AGATAGAGGTAAGATACTTA+CGG + chr8_4:50905739-50905758 None:intergenic 30.0%
GGCAACAAATCTTAACTTAA+AGG + chr8_4:50905833-50905852 None:intergenic 30.0%
AGAAGTTCCAAACAAAATAC+GGG - chr8_4:50905985-50906004 Msa1331400:intron 30.0%
! ATTTTCAGTTCACTATATGG+CGG - chr8_4:50906150-50906169 Msa1331400:intron 30.0%
! GTATAAATTTTCGTTTGCAG+AGG - chr8_4:50906557-50906576 Msa1331400:intron 30.0%
TTCGAGGATTTGATTAATCA+AGG + chr8_4:50906736-50906755 None:intergenic 30.0%
TTAGTTGTATCCGATATGAT+GGG + chr8_4:50906877-50906896 None:intergenic 30.0%
TTTAGTTGTATCCGATATGA+TGG + chr8_4:50906878-50906897 None:intergenic 30.0%
!!! AGCTCAATGTTTTTTAATGG+TGG - chr8_4:50906906-50906925 Msa1331400:five_prime_UTR 30.0%
AGTGATAATAAGGTGAGTTA+GGG + chr8_4:50906998-50907017 None:intergenic 30.0%
ATACACATGGAGTGATAATA+AGG + chr8_4:50907008-50907027 None:intergenic 30.0%
! TTGATGATAGAAGAGTGAAG+TGG + chr8_4:50903709-50903728 None:intergenic 35.0%
!!! ATGTTGAGGTTTTAAGAAGG+TGG + chr8_4:50903837-50903856 None:intergenic 35.0%
AATGATATGCGTCTATGTTG+AGG + chr8_4:50903851-50903870 None:intergenic 35.0%
AGAAGAAACAATTTGGTCCT+TGG + chr8_4:50903948-50903967 None:intergenic 35.0%
GCATGTAAATTGAAGGAACA+TGG + chr8_4:50904011-50904030 None:intergenic 35.0%
AATTCATTCAGTCTTGGGAT+TGG - chr8_4:50904315-50904334 Msa1331400:intron 35.0%
ATTCATTCAGTCTTGGGATT+GGG - chr8_4:50904316-50904335 Msa1331400:intron 35.0%
CAGCATAAACATTTGTGAGA+TGG + chr8_4:50904556-50904575 None:intergenic 35.0%
CATCTCACAAATGTTTATGC+TGG - chr8_4:50904554-50904573 Msa1331400:CDS 35.0%
TGGCACATTATAGCTCAAAT+AGG + chr8_4:50904746-50904765 None:intergenic 35.0%
CATAATTGCTTTCTATCCAC+AGG + chr8_4:50904833-50904852 None:intergenic 35.0%
GTGGATAGAAAGCAATTATG+AGG - chr8_4:50904833-50904852 Msa1331400:intron 35.0%
! GGAAAGTGATGGTGTAAAAA+TGG + chr8_4:50904878-50904897 None:intergenic 35.0%
AGTAGTACAATGGAAAGTGA+TGG + chr8_4:50904889-50904908 None:intergenic 35.0%
TTTACACTGTCACATGCATT+TGG - chr8_4:50904937-50904956 Msa1331400:CDS 35.0%
ACATGCATTTGGAGAGATTT+GGG - chr8_4:50904948-50904967 Msa1331400:CDS 35.0%
TGATGTACTTTCATGTGAAC+TGG - chr8_4:50904972-50904991 Msa1331400:CDS 35.0%
! GTGAACTGGAAAAGTTCTTT+TGG - chr8_4:50904986-50905005 Msa1331400:CDS 35.0%
!! AATTTGCTTGGTTCCACTTT+TGG - chr8_4:50905094-50905113 Msa1331400:intron 35.0%
! TATAGTTTCCATGGTTGATG+AGG + chr8_4:50905348-50905367 None:intergenic 35.0%
TTTGTAACCGCGAAAATTGA+AGG + chr8_4:50905459-50905478 None:intergenic 35.0%
! TTCAATTTTCGCGGTTACAA+AGG - chr8_4:50905458-50905477 Msa1331400:intron 35.0%
TTTGCATCAAAGCATGTCAA+GGG + chr8_4:50905492-50905511 None:intergenic 35.0%
ATTTGCATCAAAGCATGTCA+AGG + chr8_4:50905493-50905512 None:intergenic 35.0%
AACATATCAAGTGTTTGAGC+TGG + chr8_4:50905610-50905629 None:intergenic 35.0%
GATTGATATTAGGTCAGAGA+AGG - chr8_4:50905651-50905670 Msa1331400:intron 35.0%
TATTAGGTCAGAGAAGGATA+AGG - chr8_4:50905657-50905676 Msa1331400:intron 35.0%
!!! TGTTTTTAGCACTAGATGGA+AGG + chr8_4:50905702-50905721 None:intergenic 35.0%
GTACTATGAGTACTAGATAG+AGG + chr8_4:50905753-50905772 None:intergenic 35.0%
AATCAAAGCCATAAGAAGTG+AGG + chr8_4:50905950-50905969 None:intergenic 35.0%
!! GCTTTGATTTGAACTCAGAT+TGG - chr8_4:50905961-50905980 Msa1331400:intron 35.0%
GAAGTTCCAAACAAAATACG+GGG - chr8_4:50905986-50906005 Msa1331400:intron 35.0%
ATAGTTGCTAGAACACTAAC+AGG - chr8_4:50906450-50906469 Msa1331400:CDS 35.0%
TAGTTGCTAGAACACTAACA+GGG - chr8_4:50906451-50906470 Msa1331400:CDS 35.0%
TTTAAGAACACATGGATCGT+TGG - chr8_4:50906480-50906499 Msa1331400:CDS 35.0%
ACGAGTGGAAGAGTTTAAAA+GGG + chr8_4:50906798-50906817 None:intergenic 35.0%
TAGTTGTATCCGATATGATG+GGG + chr8_4:50906876-50906895 None:intergenic 35.0%
TAGGGATTAGACTGATAACA+AGG + chr8_4:50906956-50906975 None:intergenic 35.0%
!! CTTTTGAAGGGATCAACATA+GGG + chr8_4:50906974-50906993 None:intergenic 35.0%
!! TCTTTTGAAGGGATCAACAT+AGG + chr8_4:50906975-50906994 None:intergenic 35.0%
GAGTGATAATAAGGTGAGTT+AGG + chr8_4:50906999-50907018 None:intergenic 35.0%
! GTTTGGTGATTAGAGATGTG+TGG + chr8_4:50903649-50903668 None:intergenic 40.0%
CATTGTTAGTTGCTAGTGGT+TGG + chr8_4:50903732-50903751 None:intergenic 40.0%
CAACCACTAGCAACTAACAA+TGG - chr8_4:50903730-50903749 Msa1331400:three_prime_UTR 40.0%
TTGCCATTGTTAGTTGCTAG+TGG + chr8_4:50903736-50903755 None:intergenic 40.0%
CTAGCAACTAACAATGGCAA+TGG - chr8_4:50903736-50903755 Msa1331400:three_prime_UTR 40.0%
!!! GGAAGTGAAGGTTTTGTTGT+TGG + chr8_4:50903785-50903804 None:intergenic 40.0%
ATTGTGTGAGGTAAAGTGGA+AGG + chr8_4:50903812-50903831 None:intergenic 40.0%
! AGTGAAATGGTGGTTGATGT+TGG + chr8_4:50903875-50903894 None:intergenic 40.0%
GAAGAGAGCAAGTAGTGAAA+TGG + chr8_4:50903888-50903907 None:intergenic 40.0%
! AGCTTTAGCTTCATTTGGAG+GGG + chr8_4:50903912-50903931 None:intergenic 40.0%
! CAGCTTTAGCTTCATTTGGA+GGG + chr8_4:50903913-50903932 None:intergenic 40.0%
! ACAGCAGCTTTAGCTTCATT+TGG + chr8_4:50903917-50903936 None:intergenic 40.0%
GGGTGAGAGAAGAAACAATT+TGG + chr8_4:50903955-50903974 None:intergenic 40.0%
AGGGCATGCATGTAAATTGA+AGG + chr8_4:50904018-50904037 None:intergenic 40.0%
!! TTTGAAGCCTGGCTTTGATA+CGG - chr8_4:50904156-50904175 Msa1331400:CDS 40.0%
!! CAAGAAGCACTTCAAAGTTC+TGG - chr8_4:50904259-50904278 Msa1331400:intron 40.0%
TGATATCCAAACAGCTGCTA+AGG - chr8_4:50904285-50904304 Msa1331400:intron 40.0%
!!! TGGTTTTATATGGTCACCTG+TGG - chr8_4:50904814-50904833 Msa1331400:intron 40.0%
AGAAAGCAATTATGAGGGTG+AGG - chr8_4:50904839-50904858 Msa1331400:intron 40.0%
GAAAGCAATTATGAGGGTGA+GGG - chr8_4:50904840-50904859 Msa1331400:intron 40.0%
CACATGCATTTGGAGAGATT+TGG - chr8_4:50904947-50904966 Msa1331400:CDS 40.0%
AATTATGGCTCCTCCAAAAG+TGG + chr8_4:50905110-50905129 None:intergenic 40.0%
CAAACAACCAAGGTGATTGA+AGG - chr8_4:50905308-50905327 Msa1331400:intron 40.0%
! GATGCATGTGTTTTCTTTGC+AGG - chr8_4:50905574-50905593 Msa1331400:intron 40.0%
GAGAAGGATAAGGACAAATC+CGG - chr8_4:50905667-50905686 Msa1331400:intron 40.0%
GAGGTAAGATACTTACGGAA+TGG + chr8_4:50905734-50905753 None:intergenic 40.0%
!! CTCAAATTATCAAGTGTCGG+TGG + chr8_4:50906209-50906228 None:intergenic 40.0%
TTGAATGTAACCTCACGTGT+CGG - chr8_4:50906241-50906260 Msa1331400:intron 40.0%
GGCTTGGATTTAAGAACACA+TGG - chr8_4:50906472-50906491 Msa1331400:CDS 40.0%
!!! ATCGTTGGTGATGGATTTTC+TGG - chr8_4:50906495-50906514 Msa1331400:CDS 40.0%
!! ATGGATTTTCTGGAGGCAAA+GGG - chr8_4:50906505-50906524 Msa1331400:CDS 40.0%
TCTACTCAGAAACTTCTTCC+TGG - chr8_4:50906645-50906664 Msa1331400:CDS 40.0%
CTACTCAGAAACTTCTTCCT+GGG - chr8_4:50906646-50906665 Msa1331400:CDS 40.0%
TACTCAGAAACTTCTTCCTG+GGG - chr8_4:50906647-50906666 Msa1331400:CDS 40.0%
TGAGAGATCAATGTTGAGTG+AGG + chr8_4:50906691-50906710 None:intergenic 40.0%
CACGAGTGGAAGAGTTTAAA+AGG + chr8_4:50906799-50906818 None:intergenic 40.0%
TTGCAATCCCCTAAAACTAG+TGG - chr8_4:50906845-50906864 Msa1331400:exon 40.0%
AGTTGTATCCGATATGATGG+GGG + chr8_4:50906875-50906894 None:intergenic 40.0%
! GTGAGTTAGGGTCTTTTGAA+GGG + chr8_4:50906986-50907005 None:intergenic 40.0%
!! TGTTGTTGGTAGTGAAGCCA+TGG + chr8_4:50903771-50903790 None:intergenic 45.0%
TGAGGTAAAGTGGAAGGAGA+TGG + chr8_4:50903806-50903825 None:intergenic 45.0%
GGTGATTGTGTGAGGTAAAG+TGG + chr8_4:50903816-50903835 None:intergenic 45.0%
AAGAAGGTGGTGATTGTGTG+AGG + chr8_4:50903824-50903843 None:intergenic 45.0%
GAGAGCAAGTAGTGAAATGG+TGG + chr8_4:50903885-50903904 None:intergenic 45.0%
! GCAGCTTTAGCTTCATTTGG+AGG + chr8_4:50903914-50903933 None:intergenic 45.0%
AGCTGCTGTTAACATCTCCA+AGG - chr8_4:50903928-50903947 Msa1331400:exon 45.0%
GCAGACTATTGATCAGGTTC+AGG - chr8_4:50904075-50904094 Msa1331400:CDS 45.0%
GACTATTGATCAGGTTCAGG+TGG - chr8_4:50904078-50904097 Msa1331400:CDS 45.0%
ATTGATCAGGTTCAGGTGGT+TGG - chr8_4:50904082-50904101 Msa1331400:CDS 45.0%
!!! GGTGGTTGGTTCTGGTTTTT+TGG - chr8_4:50904096-50904115 Msa1331400:CDS 45.0%
! AACGTGTTGCTGAAGCTGTA+GGG - chr8_4:50904128-50904147 Msa1331400:CDS 45.0%
AAGTGCTTCTTGAGCCTTCT+TGG + chr8_4:50904251-50904270 None:intergenic 45.0%
AGCAAACCTTAGCAGCTGTT+TGG + chr8_4:50904294-50904313 None:intergenic 45.0%
ATTGCCATGCCACAGATAGA+TGG + chr8_4:50904672-50904691 None:intergenic 45.0%
GGGTGCAGTTAGTAGTACAA+TGG + chr8_4:50904899-50904918 None:intergenic 45.0%
!! TTGCTTGGTTCCACTTTTGG+AGG - chr8_4:50905097-50905116 Msa1331400:intron 45.0%
TGCTGCACAACAAACAACCA+AGG - chr8_4:50905298-50905317 Msa1331400:CDS 45.0%
!! TCCATGGTTGATGAGGCTAT+TGG + chr8_4:50905341-50905360 None:intergenic 45.0%
! ACCTCTTGTTTCCTCCTATC+TGG - chr8_4:50905423-50905442 Msa1331400:intron 45.0%
ACCAGATAGGAGGAAACAAG+AGG + chr8_4:50905427-50905446 None:intergenic 45.0%
! GCCATCTCCTTCAATTTTCG+CGG - chr8_4:50905449-50905468 Msa1331400:intron 45.0%
ACCGCGAAAATTGAAGGAGA+TGG + chr8_4:50905453-50905472 None:intergenic 45.0%
AGCATGAGCCTCACTTCTTA+TGG - chr8_4:50905939-50905958 Msa1331400:intron 45.0%
TCCAAACAAAATACGGGGAC+TGG - chr8_4:50905991-50906010 Msa1331400:intron 45.0%
! ACCAGTCCCCGTATTTTGTT+TGG + chr8_4:50905995-50906014 None:intergenic 45.0%
! ACAAAATACGGGGACTGGTA+AGG - chr8_4:50905996-50906015 Msa1331400:intron 45.0%
GGTAAGGAATGTGAAGAGAG+TGG - chr8_4:50906012-50906031 Msa1331400:intron 45.0%
AGGCACCAACATTGTGATCT+TGG - chr8_4:50906084-50906103 Msa1331400:intron 45.0%
CGAGTCCAAGATCACAATGT+TGG + chr8_4:50906092-50906111 None:intergenic 45.0%
CATTGTGATCTTGGACTCGT+AGG - chr8_4:50906093-50906112 Msa1331400:intron 45.0%
! AACACATGGATCGTTGGTGA+TGG - chr8_4:50906486-50906505 Msa1331400:CDS 45.0%
!!! GTTGGTGATGGATTTTCTGG+AGG - chr8_4:50906498-50906517 Msa1331400:CDS 45.0%
!! GATGGATTTTCTGGAGGCAA+AGG - chr8_4:50906504-50906523 Msa1331400:CDS 45.0%
GGGTGGTTACAGAGTAGATT+AGG - chr8_4:50906525-50906544 Msa1331400:intron 45.0%
TTTCTGAGTAGATTGCCTGC+TGG + chr8_4:50906637-50906656 None:intergenic 45.0%
AAAGAATCTCAATCAGCCCC+AGG + chr8_4:50906666-50906685 None:intergenic 45.0%
! GTTGTATCCGATATGATGGG+GGG + chr8_4:50906874-50906893 None:intergenic 45.0%
! GGTGAGTTAGGGTCTTTTGA+AGG + chr8_4:50906987-50907006 None:intergenic 45.0%
GGCAATGGAGATTACAGCCA+TGG - chr8_4:50903751-50903770 Msa1331400:three_prime_UTR 50.0%
GTGGAAGGAGATGGAAGTGA+AGG + chr8_4:50903797-50903816 None:intergenic 50.0%
GGTGGAGCAGACTATTGATC+AGG - chr8_4:50904069-50904088 Msa1331400:CDS 50.0%
! CAACGTGTTGCTGAAGCTGT+AGG - chr8_4:50904127-50904146 Msa1331400:CDS 50.0%
CTTCTTGGAAGCCACAGAGA+AGG + chr8_4:50904236-50904255 None:intergenic 50.0%
CTTCTCTGTGGCTTCCAAGA+AGG - chr8_4:50904234-50904253 Msa1331400:intron 50.0%
GCTCTGGTACCATCTATCTG+TGG - chr8_4:50904660-50904679 Msa1331400:intron 50.0%
GGTACCATCTATCTGTGGCA+TGG - chr8_4:50904665-50904684 Msa1331400:intron 50.0%
GCAATTATGAGGGTGAGGGT+TGG - chr8_4:50904844-50904863 Msa1331400:intron 50.0%
CTAACTGCACCCTTAGTGAG+TGG - chr8_4:50904907-50904926 Msa1331400:CDS 50.0%
CTTGGCACCTTCAATCACCT+TGG + chr8_4:50905318-50905337 None:intergenic 50.0%
!! GGTTGATGAGGCTATTGGCT+TGG + chr8_4:50905336-50905355 None:intergenic 50.0%
GCCAATAGCCTCATCAACCA+TGG - chr8_4:50905337-50905356 Msa1331400:intron 50.0%
TCAGATCCTACCGTGATTGC+TGG - chr8_4:50905374-50905393 Msa1331400:intron 50.0%
TCCAGCTGTTCCAGCAATCA+CGG + chr8_4:50905387-50905406 None:intergenic 50.0%
AAGGAGATGGCAGACCAGAT+AGG + chr8_4:50905440-50905459 None:intergenic 50.0%
AGATGGAAGGCGAGGAATAC+CGG + chr8_4:50905689-50905708 None:intergenic 50.0%
TTAGCACTAGATGGAAGGCG+AGG + chr8_4:50905697-50905716 None:intergenic 50.0%
TCATGCTTACTAGTGCCCCT+GGG - chr8_4:50906332-50906351 Msa1331400:CDS 50.0%
AAATGCGAACAAGTGCCCCA+GGG + chr8_4:50906351-50906370 None:intergenic 50.0%
AAAATGCGAACAAGTGCCCC+AGG + chr8_4:50906352-50906371 None:intergenic 50.0%
GCTAGAACACTAACAGGGCT+TGG - chr8_4:50906456-50906475 Msa1331400:CDS 50.0%
!! GATTTTCTGGAGGCAAAGGG+TGG - chr8_4:50906508-50906527 Msa1331400:CDS 50.0%
AACACCTGCAGGGATGATTC+TGG + chr8_4:50906595-50906614 None:intergenic 50.0%
ATCATCCCTGCAGGTGTTAG+AGG - chr8_4:50906597-50906616 Msa1331400:intron 50.0%
AACCTCCTCTAACACCTGCA+GGG + chr8_4:50906605-50906624 None:intergenic 50.0%
AAACCTCCTCTAACACCTGC+AGG + chr8_4:50906606-50906625 None:intergenic 50.0%
! GCAGGTGTTAGAGGAGGTTT+TGG - chr8_4:50906606-50906625 Msa1331400:intron 50.0%
!!! GAGGTTTTGGAACAACCAGC+AGG - chr8_4:50906619-50906638 Msa1331400:intron 50.0%
TTCCACTCGTGTACGCTTAG+TGG - chr8_4:50906808-50906827 Msa1331400:CDS 50.0%
! CAGGTTCAGGTGGTTGGTTC+TGG - chr8_4:50904088-50904107 Msa1331400:CDS 55.0%
!! GTAGGGAGTGCTTTGAAGCC+TGG - chr8_4:50904145-50904164 Msa1331400:CDS 55.0%
TTGCCAATTGTGCAGCAGGC+TGG - chr8_4:50904181-50904200 Msa1331400:intron 55.0%
TGTCCAGCCTGCTGCACAAT+TGG + chr8_4:50904187-50904206 None:intergenic 55.0%
TGCTTCTCCAGCCTTCTCTG+TGG - chr8_4:50904222-50904241 Msa1331400:intron 55.0%
TTGGAAGCCACAGAGAAGGC+TGG + chr8_4:50904232-50904251 None:intergenic 55.0%
GTCTTGGGATTGGGACCGTT+TGG - chr8_4:50904325-50904344 Msa1331400:intron 55.0%
!! TGAGGGTGAGGGTTGGTTTG+AGG - chr8_4:50904851-50904870 Msa1331400:intron 55.0%
GCTGTTCCAGCAATCACGGT+AGG + chr8_4:50905383-50905402 None:intergenic 55.0%
ACCGTGATTGCTGGAACAGC+TGG - chr8_4:50905383-50905402 Msa1331400:intron 55.0%
GAGATGGCAGACCAGATAGG+AGG + chr8_4:50905437-50905456 None:intergenic 55.0%
TGACATGACACCGACACGTG+AGG + chr8_4:50906254-50906273 None:intergenic 55.0%
GTCATGCTTACTAGTGCCCC+TGG - chr8_4:50906331-50906350 Msa1331400:CDS 55.0%
CATGCTTACTAGTGCCCCTG+GGG - chr8_4:50906333-50906352 Msa1331400:CDS 55.0%
AATGCGAACAAGTGCCCCAG+GGG + chr8_4:50906350-50906369 None:intergenic 55.0%
CCTGCAGGGATGATTCTGGA+TGG + chr8_4:50906591-50906610 None:intergenic 55.0%
CCATCCAGAATCATCCCTGC+AGG - chr8_4:50906588-50906607 Msa1331400:intron 55.0%
ATCCCTGCAGGTGTTAGAGG+AGG - chr8_4:50906600-50906619 Msa1331400:intron 55.0%
AGCCACTAAGCGTACACGAG+TGG + chr8_4:50906813-50906832 None:intergenic 55.0%
! GTATCCGATATGATGGGGGG+CGG + chr8_4:50906871-50906890 None:intergenic 55.0%
GGCAACGCCGTATCAAAGCC+AGG + chr8_4:50904166-50904185 None:intergenic 60.0%
GGCGTTGCCAATTGTGCAGC+AGG - chr8_4:50904177-50904196 Msa1331400:intron 60.0%
TGTGCAGCAGGCTGGACAAG+AGG - chr8_4:50904189-50904208 Msa1331400:intron 60.0%
!!! GGGGCGGCCACTAGTTTTAG+GGG + chr8_4:50906855-50906874 None:intergenic 60.0%
!!! GGGGGCGGCCACTAGTTTTA+GGG + chr8_4:50906856-50906875 None:intergenic 60.0%
!!! GGGGGGCGGCCACTAGTTTT+AGG + chr8_4:50906857-50906876 None:intergenic 65.0%
GTGGCCGCCCCCCATCATAT+CGG - chr8_4:50906864-50906883 Msa1331400:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 50903556 50907051 50903556 ID=Msa1331400;Name=Msa1331400
chr8_4 mRNA 50903556 50907051 50903556 ID=Msa1331400-mRNA-1;Parent=Msa1331400;Name=Msa1331400-mRNA-1;_AED=0.05;_eAED=0.05;_QI=138|1|1|1|0.83|0.71|7|374|392
chr8_4 exon 50903556 50904176 50903556 ID=Msa1331400-mRNA-1:exon:14977;Parent=Msa1331400-mRNA-1
chr8_4 exon 50904497 50904628 50904497 ID=Msa1331400-mRNA-1:exon:14976;Parent=Msa1331400-mRNA-1
chr8_4 exon 50904870 50905011 50904870 ID=Msa1331400-mRNA-1:exon:14975;Parent=Msa1331400-mRNA-1
chr8_4 exon 50905128 50905320 50905128 ID=Msa1331400-mRNA-1:exon:14974;Parent=Msa1331400-mRNA-1
chr8_4 exon 50906301 50906537 50906301 ID=Msa1331400-mRNA-1:exon:14973;Parent=Msa1331400-mRNA-1
chr8_4 exon 50906631 50906928 50906631 ID=Msa1331400-mRNA-1:exon:14972;Parent=Msa1331400-mRNA-1
chr8_4 exon 50906984 50907051 50906984 ID=Msa1331400-mRNA-1:exon:14971;Parent=Msa1331400-mRNA-1
chr8_4 five_prime_UTR 50906984 50907051 50906984 ID=Msa1331400-mRNA-1:five_prime_utr;Parent=Msa1331400-mRNA-1
chr8_4 five_prime_UTR 50906859 50906928 50906859 ID=Msa1331400-mRNA-1:five_prime_utr;Parent=Msa1331400-mRNA-1
chr8_4 CDS 50906631 50906858 50906631 ID=Msa1331400-mRNA-1:cds;Parent=Msa1331400-mRNA-1
chr8_4 CDS 50906301 50906537 50906301 ID=Msa1331400-mRNA-1:cds;Parent=Msa1331400-mRNA-1
chr8_4 CDS 50905128 50905320 50905128 ID=Msa1331400-mRNA-1:cds;Parent=Msa1331400-mRNA-1
chr8_4 CDS 50904870 50905011 50904870 ID=Msa1331400-mRNA-1:cds;Parent=Msa1331400-mRNA-1
chr8_4 CDS 50904497 50904628 50904497 ID=Msa1331400-mRNA-1:cds;Parent=Msa1331400-mRNA-1
chr8_4 CDS 50903930 50904176 50903930 ID=Msa1331400-mRNA-1:cds;Parent=Msa1331400-mRNA-1
chr8_4 three_prime_UTR 50903556 50903929 50903556 ID=Msa1331400-mRNA-1:three_prime_utr;Parent=Msa1331400-mRNA-1
Gene Sequence

>Msa1331400

ATGGCAATGGAGATTACAGCCATGGCTTCACTACCAACAACAAAACCTTCACTTCCATCTCCTTCCACTTTACCTCACACAATCACCACCTTCTTAAAACCTCAACATAGACGCATATCATTACCAACATCAACCACCATTTCACTACTTGCTCTCTTCACCCCTCCAAATGAAGCTAAAGCTGCTGTTAACATCTCCAAGGACCAAATTGTTTCTTCTCTCACCCAAGTGGAGCAGACTATTGATCAGGTTCAGGTGGTTGGTTCTGGTTTTTTGGACTCAGCACAACGTGTTGCTGAAGCTGTAGGGAGTGCTTTGAAGCCTGGCTTTGATACGGCGTTGCCAATTGTGCAGCAGGCTGGACAAGAGGCTTTGAAAATTGCTTCTCCAGCCTTCTCTGTGGCTTCCAAGAAGGCTCAAGAAGCACTTCAAAGTTCTGGTCTTGATATCCAAACAGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAGGTGATTGAAGGTGCCAAGCCAATAGCCTCATCAACCATGGAAACTATAACTTCATCAGATCCTACCGTGATTGCTGGAACAGCTGGAGCACTATTCATTGCATACCTCTTGTTTCCTCCTATCTGGTCTGCCATCTCCTTCAATTTTCGCGGTTACAAAGGAGACTTGACACCAGCTCAAACACTTGATATGTTATGCACACAAAACTACATTTTGATTGATATTAGGTCAGAGAAGGATAAGGACAAATCCGGTATTCCTCGCCTTCCATCTAGTGCTAAAAACAAGATGGTTGCCATTCCATTGGAAGAAGTTCCAAACAAAATACGGGGACTGGTAAGGAATGTGAAGAGAGTGGAAGCTGAAATAGCAGCATTAAAGATTTCATATCTGAAGAAAATCAACAAAGGCACCAACATTGTGATCTTGGACTCGTACTCGGACTCAGCAAAGATAGTTGCTAGAACACTAACAGGGCTTGGATTTAAGAACACATGGATCGTTGGTGATGGATTTTCTGGAGGCAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCGTATAAATTTTCGTTTGCAGAGGTGTTGTCACCATCCAGAATCATCCCTGCAGGTGTTAGAGGAGGTTTTGGAACAACCAGCAGGCAATCTACTCAGAAACTTCTTCCTGGGGCTGATTGA

Protein sequence

>Msa1331400

MAMEITAMASLPTTKPSLPSPSTLPHTITTFLKPQHRRISLPTSTTISLLALFTPPNEAKAAVNISKDQIVSSLTQVEQTIDQVQVVGSGFLDSAQRVAEAVGSALKPGFDTALPIVQQAGQEALKIASPAFSVASKKAQEALQSSGLDIQTAAKTVADAAQQTTKVIEGAKPIASSTMETITSSDPTVIAGTAGALFIAYLLFPPIWSAISFNFRGYKGDLTPAQTLDMLCTQNYILIDIRSEKDKDKSGIPRLPSSAKNKMVAIPLEEVPNKIRGLVRNVKRVEAEIAALKISYLKKINKGTNIVILDSYSDSAKIVARTLTGLGFKNTWIVGDGFSGGKGWLQSRLGTDSYKFSFAEVLSPSRIIPAGVRGGFGTTSRQSTQKLLPGAD*