Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833080 | AES94153.1 | 95.355 | 409 | 19 | 0 | 1 | 409 | 1 | 409 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833080 | sp|G7KEU7|SBT_MEDTR | 86.341 | 410 | 47 | 3 | 1 | 409 | 1 | 402 | 0.0 | 711 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833080 | G7KEU6 | 95.355 | 409 | 19 | 0 | 1 | 409 | 1 | 409 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014790 | Msa0833080 | 0.802686 | 4.986624e-49 | -8.615850e-47 |
| Msa0026120 | Msa0833080 | 0.837961 | 3.816213e-57 | -8.615850e-47 |
| Msa0046670 | Msa0833080 | 0.817079 | 3.971825e-52 | -8.615850e-47 |
| Msa0063100 | Msa0833080 | 0.805539 | 1.271398e-49 | -8.615850e-47 |
| Msa0072710 | Msa0833080 | 0.806481 | 8.055065e-50 | -8.615850e-47 |
| Msa0110350 | Msa0833080 | 0.810512 | 1.110982e-50 | -8.615850e-47 |
| Msa0112800 | Msa0833080 | 0.842581 | 2.370093e-58 | -8.615850e-47 |
| Msa0607410 | Msa0833080 | 0.818652 | 1.752667e-52 | -8.615850e-47 |
| Msa0607620 | Msa0833080 | 0.823493 | 1.344755e-53 | -8.615850e-47 |
| Msa0619460 | Msa0833080 | 0.800614 | 1.326997e-48 | -8.615850e-47 |
| Msa0619520 | Msa0833080 | 0.809927 | 1.485085e-50 | -8.615850e-47 |
| Msa0635130 | Msa0833080 | 0.801493 | 8.771867e-49 | -8.615850e-47 |
| Msa0636750 | Msa0833080 | 0.801260 | 9.794205e-49 | -8.615850e-47 |
| Msa0636760 | Msa0833080 | 0.820073 | 8.315673e-53 | -8.615850e-47 |
| Msa0639880 | Msa0833080 | 0.836566 | 8.680703e-57 | -8.615850e-47 |
| Msa0645460 | Msa0833080 | 0.800092 | 1.694574e-48 | -8.615850e-47 |
| Msa0659130 | Msa0833080 | 0.812289 | 4.570102e-51 | -8.615850e-47 |
| Msa0659590 | Msa0833080 | 0.805300 | 1.426687e-49 | -8.615850e-47 |
| Msa0684920 | Msa0833080 | 0.817219 | 3.692980e-52 | -8.615850e-47 |
| Msa0688760 | Msa0833080 | 0.802227 | 6.200745e-49 | -8.615850e-47 |
| Msa0692000 | Msa0833080 | 0.822156 | 2.753995e-53 | -8.615850e-47 |
| Msa0705610 | Msa0833080 | 0.802100 | 6.584978e-49 | -8.615850e-47 |
| Msa0712100 | Msa0833080 | 0.801760 | 7.734868e-49 | -8.615850e-47 |
| Msa0712440 | Msa0833080 | 0.821156 | 4.690713e-53 | -8.615850e-47 |
| Msa0726000 | Msa0833080 | 0.813102 | 3.033538e-51 | -8.615850e-47 |
| Msa0729920 | Msa0833080 | 0.800685 | 1.283485e-48 | -8.615850e-47 |
| Msa0741710 | Msa0833080 | 0.814164 | 1.771160e-51 | -8.615850e-47 |
| Msa0748050 | Msa0833080 | 0.804165 | 2.461884e-49 | -8.615850e-47 |
| Msa0749900 | Msa0833080 | 0.809314 | 2.011907e-50 | -8.615850e-47 |
| Msa0752520 | Msa0833080 | 0.814474 | 1.512541e-51 | -8.615850e-47 |
| Msa0752540 | Msa0833080 | 0.934765 | 2.431248e-96 | -8.615850e-47 |
| Msa0761930 | Msa0833080 | 0.822519 | 2.267999e-53 | -8.615850e-47 |
| Msa0797240 | Msa0833080 | 0.803835 | 2.884071e-49 | -8.615850e-47 |
| Msa0829110 | Msa0833080 | 0.805273 | 1.445519e-49 | -8.615850e-47 |
| Msa0830120 | Msa0833080 | 0.800969 | 1.123200e-48 | -8.615850e-47 |
| Msa0830450 | Msa0833080 | 0.800943 | 1.136966e-48 | -8.615850e-47 |
| Msa0833070 | Msa0833080 | 0.882051 | 1.439776e-70 | -8.615850e-47 |
| Msa0833080 | Msa0833100 | 0.801923 | 7.160805e-49 | -8.615850e-47 |
| Msa0833080 | Msa0839730 | 0.802351 | 5.847774e-49 | -8.615850e-47 |
| Msa0833080 | Msa0846180 | 0.802838 | 4.638781e-49 | -8.615850e-47 |
| Msa0833080 | Msa0883390 | 0.808992 | 2.357518e-50 | -8.615850e-47 |
| Msa0833080 | Msa0906150 | 0.830348 | 3.089236e-55 | -8.615850e-47 |
| Msa0833080 | Msa0937350 | 0.821892 | 3.170650e-53 | -8.615850e-47 |
| Msa0833080 | Msa0957800 | 0.809993 | 1.437697e-50 | -8.615850e-47 |
| Msa0833080 | Msa0974660 | 0.820636 | 6.178188e-53 | -8.615850e-47 |
| Msa0833080 | Msa0984820 | 0.804451 | 2.146379e-49 | -8.615850e-47 |
| Msa0833080 | Msa0984830 | 0.833252 | 5.932329e-56 | -8.615850e-47 |
| Msa0833080 | Msa0984840 | 0.805832 | 1.103414e-49 | -8.615850e-47 |
| Msa0833080 | Msa1009150 | 0.801302 | 9.599584e-49 | -8.615850e-47 |
| Msa0833080 | Msa1014120 | 0.815088 | 1.105870e-51 | -8.615850e-47 |
| Msa0833080 | Msa1031220 | 0.808287 | 3.335775e-50 | -8.615850e-47 |
| Msa0833080 | Msa1033670 | 0.837732 | 4.370245e-57 | -8.615850e-47 |
| Msa0833080 | Msa1036360 | 0.817858 | 2.651420e-52 | -8.615850e-47 |
| Msa0833080 | Msa1050320 | 0.809436 | 1.893968e-50 | -8.615850e-47 |
| Msa0833080 | Msa1076640 | 0.818859 | 1.573252e-52 | -8.615850e-47 |
| Msa0833080 | Msa1098350 | 0.807473 | 4.968134e-50 | -8.615850e-47 |
| Msa0833080 | Msa1138480 | 0.816408 | 5.616420e-52 | -8.615850e-47 |
| Msa0833080 | Msa1140460 | 0.801944 | 7.089265e-49 | -8.615850e-47 |
| Msa0833080 | Msa1182400 | 0.805384 | 1.370347e-49 | -8.615850e-47 |
| Msa0833080 | Msa1182960 | 0.817750 | 2.804672e-52 | -8.615850e-47 |
| Msa0833080 | Msa1193680 | 0.802176 | 6.352330e-49 | -8.615850e-47 |
| Msa0833080 | Msa1199750 | 0.807731 | 4.380439e-50 | -8.615850e-47 |
| Msa0833080 | Msa1204500 | 0.800125 | 1.668553e-48 | -8.615850e-47 |
| Msa0833080 | Msa1235050 | 0.811819 | 5.786461e-51 | -8.615850e-47 |
| Msa0833080 | Msa1235940 | 0.806565 | 7.735080e-50 | -8.615850e-47 |
| Msa0833080 | Msa1277580 | 0.805689 | 1.182598e-49 | -8.615850e-47 |
| Msa0833080 | Msa1279310 | 0.820428 | 6.896307e-53 | -8.615850e-47 |
| Msa0833080 | Msa1279320 | 0.805892 | 1.071595e-49 | -8.615850e-47 |
| Msa0833080 | Msa1287640 | 0.808432 | 3.106162e-50 | -8.615850e-47 |
| Msa0833080 | Msa1319440 | 0.803324 | 3.681201e-49 | -8.615850e-47 |
| Msa0833080 | Msa1328600 | 0.809824 | 1.562853e-50 | -8.615850e-47 |
| Msa0833080 | Msa1368800 | 0.824188 | 9.242151e-54 | -8.615850e-47 |
| Msa0833080 | Msa1386020 | 0.827259 | 1.727099e-54 | -8.615850e-47 |
| Msa0833080 | Msa1391600 | 0.820478 | 6.716515e-53 | -8.615850e-47 |
| Msa0833080 | Msa1431870 | 0.816438 | 5.530926e-52 | -8.615850e-47 |
| Msa0833080 | Msa1432350 | 0.801919 | 7.172612e-49 | -8.615850e-47 |
| Msa0833080 | Msa1433380 | 0.808892 | 2.477519e-50 | -8.615850e-47 |
| Msa0833080 | Msa1437650 | 0.811702 | 6.132930e-51 | -8.615850e-47 |
| Msa0833080 | Msa1443440 | 0.810896 | 9.174882e-51 | -8.615850e-47 |
| Msa0122540 | Msa0833080 | 0.831371 | 1.733586e-55 | -8.615850e-47 |
| Msa0125810 | Msa0833080 | 0.802003 | 6.893789e-49 | -8.615850e-47 |
| Msa0137810 | Msa0833080 | 0.802291 | 6.016330e-49 | -8.615850e-47 |
| Msa0166580 | Msa0833080 | 0.832358 | 9.894366e-56 | -8.615850e-47 |
| Msa0170450 | Msa0833080 | 0.817803 | 2.727980e-52 | -8.615850e-47 |
| Msa0184030 | Msa0833080 | 0.807600 | 4.669387e-50 | -8.615850e-47 |
| Msa0201910 | Msa0833080 | 0.804502 | 2.094339e-49 | -8.615850e-47 |
| Msa0206600 | Msa0833080 | 0.818970 | 1.484248e-52 | -8.615850e-47 |
| Msa0218590 | Msa0833080 | 0.804440 | 2.158334e-49 | -8.615850e-47 |
| Msa0228080 | Msa0833080 | 0.841456 | 4.699907e-58 | -8.615850e-47 |
| Msa0228090 | Msa0833080 | 0.800799 | 1.216321e-48 | -8.615850e-47 |
| Msa0234800 | Msa0833080 | 0.812537 | 4.034450e-51 | -8.615850e-47 |
| Msa0367310 | Msa0833080 | 0.801116 | 1.048015e-48 | -8.615850e-47 |
| Msa0372250 | Msa0833080 | 0.812852 | 3.442209e-51 | -8.615850e-47 |
| Msa0397040 | Msa0833080 | 0.835735 | 1.411591e-56 | -8.615850e-47 |
| Msa0397050 | Msa0833080 | 0.803962 | 2.714359e-49 | -8.615850e-47 |
| Msa0404880 | Msa0833080 | 0.807167 | 5.768431e-50 | -8.615850e-47 |
| Msa0408160 | Msa0833080 | 0.801322 | 9.512151e-49 | -8.615850e-47 |
| Msa0409000 | Msa0833080 | 0.818181 | 2.240801e-52 | -8.615850e-47 |
| Msa0410960 | Msa0833080 | 0.820924 | 5.305165e-53 | -8.615850e-47 |
| Msa0423590 | Msa0833080 | 0.815132 | 1.081057e-51 | -8.615850e-47 |
| Msa0444310 | Msa0833080 | 0.838492 | 2.785577e-57 | -8.615850e-47 |
| Msa0451760 | Msa0833080 | 0.822094 | 2.847228e-53 | -8.615850e-47 |
| Msa0452010 | Msa0833080 | 0.849221 | 3.717401e-60 | -8.615850e-47 |
| Msa0452120 | Msa0833080 | 0.810685 | 1.019313e-50 | -8.615850e-47 |
| Msa0452180 | Msa0833080 | 0.821744 | 3.430016e-53 | -8.615850e-47 |
| Msa0455610 | Msa0833080 | 0.820082 | 8.275189e-53 | -8.615850e-47 |
| Msa0481320 | Msa0833080 | 0.804520 | 2.077206e-49 | -8.615850e-47 |
| Msa0261200 | Msa0833080 | 0.810428 | 1.158460e-50 | -8.615850e-47 |
| Msa0272420 | Msa0833080 | 0.829651 | 4.569976e-55 | -8.615850e-47 |
| Msa0273230 | Msa0833080 | 0.809377 | 1.949594e-50 | -8.615850e-47 |
| Msa0279490 | Msa0833080 | 0.800911 | 1.153921e-48 | -8.615850e-47 |
| Msa0299270 | Msa0833080 | 0.826872 | 2.136778e-54 | -8.615850e-47 |
| Msa0304020 | Msa0833080 | 0.816888 | 4.384304e-52 | -8.615850e-47 |
| Msa0312570 | Msa0833080 | 0.809770 | 1.605401e-50 | -8.615850e-47 |
| Msa0315010 | Msa0833080 | 0.812582 | 3.943893e-51 | -8.615850e-47 |
| Msa0359630 | Msa0833080 | 0.803693 | 3.086305e-49 | -8.615850e-47 |
| Msa0361500 | Msa0833080 | 0.803311 | 3.703902e-49 | -8.615850e-47 |
| Msa0363440 | Msa0833080 | 0.809326 | 2.000111e-50 | -8.615850e-47 |
| Msa0486870 | Msa0833080 | 0.811295 | 7.518793e-51 | -8.615850e-47 |
| Msa0489620 | Msa0833080 | 0.805367 | 1.381507e-49 | -8.615850e-47 |
| Msa0503620 | Msa0833080 | 0.832907 | 7.231502e-56 | -8.615850e-47 |
| Msa0512430 | Msa0833080 | 0.801006 | 1.103759e-48 | -8.615850e-47 |
| Msa0528170 | Msa0833080 | 0.805018 | 1.634588e-49 | -8.615850e-47 |
| Msa0543310 | Msa0833080 | 0.864183 | 1.460175e-64 | -8.615850e-47 |
| Msa0554410 | Msa0833080 | 0.802514 | 5.411931e-49 | -8.615850e-47 |
| Msa0568810 | Msa0833080 | 0.807923 | 3.986538e-50 | -8.615850e-47 |
| Msa0595240 | Msa0833080 | 0.800991 | 1.111242e-48 | -8.615850e-47 |
| Msa0599250 | Msa0833080 | 0.831970 | 1.234353e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833080 | MtrunA17_Chr5g0398351 | 95.355 | 409 | 19 | 0 | 1 | 409 | 752 | 1160 | 0.0 | 800 |
| Msa0833080 | MtrunA17_Chr5g0398351 | 89.153 | 378 | 40 | 1 | 33 | 409 | 13 | 390 | 0.0 | 689 |
| Msa0833080 | MtrunA17_Chr5g0398401 | 91.198 | 409 | 36 | 0 | 1 | 409 | 1 | 409 | 0.0 | 764 |
| Msa0833080 | MtrunA17_Chr5g0398241 | 90.709 | 409 | 38 | 0 | 1 | 409 | 1 | 409 | 0.0 | 758 |
| Msa0833080 | MtrunA17_Chr5g0398331 | 61.480 | 392 | 140 | 5 | 22 | 409 | 21 | 405 | 1.32e-157 | 462 |
| Msa0833080 | MtrunA17_Chr5g0398311 | 58.838 | 413 | 148 | 8 | 8 | 409 | 1 | 402 | 8.07e-150 | 442 |
| Msa0833080 | MtrunA17_Chr4g0057061 | 54.177 | 419 | 174 | 10 | 1 | 409 | 20 | 430 | 8.83e-142 | 422 |
| Msa0833080 | MtrunA17_Chr4g0053781 | 45.669 | 381 | 184 | 7 | 44 | 409 | 30 | 402 | 1.53e-97 | 307 |
| Msa0833080 | MtrunA17_Chr7g0262161 | 44.898 | 392 | 188 | 11 | 38 | 409 | 20 | 403 | 1.07e-94 | 300 |
| Msa0833080 | MtrunA17_Chr2g0300751 | 43.142 | 401 | 187 | 8 | 44 | 409 | 26 | 420 | 8.69e-90 | 288 |
| Msa0833080 | MtrunA17_Chr5g0401511 | 42.344 | 418 | 206 | 11 | 11 | 409 | 7 | 408 | 1.68e-89 | 286 |
| Msa0833080 | MtrunA17_Chr1g0189561 | 41.163 | 430 | 206 | 12 | 2 | 409 | 1 | 405 | 4.15e-86 | 278 |
| Msa0833080 | MtrunA17_Chr1g0152771 | 40.811 | 419 | 211 | 11 | 8 | 409 | 2 | 400 | 6.82e-86 | 277 |
| Msa0833080 | MtrunA17_Chr4g0020651 | 40.385 | 416 | 218 | 10 | 10 | 410 | 5 | 405 | 1.97e-85 | 276 |
| Msa0833080 | MtrunA17_Chr4g0070391 | 42.558 | 430 | 194 | 14 | 2 | 409 | 1 | 399 | 1.17e-83 | 271 |
| Msa0833080 | MtrunA17_Chr8g0345971 | 40.111 | 359 | 185 | 7 | 45 | 377 | 30 | 384 | 1.23e-81 | 266 |
| Msa0833080 | MtrunA17_Chr4g0037221 | 39.744 | 390 | 200 | 8 | 44 | 409 | 32 | 410 | 2.32e-81 | 265 |
| Msa0833080 | MtrunA17_Chr8g0344971 | 44.103 | 390 | 189 | 9 | 44 | 409 | 29 | 413 | 5.46e-81 | 264 |
| Msa0833080 | MtrunA17_Chr1g0204321 | 40.000 | 395 | 203 | 9 | 44 | 409 | 36 | 425 | 4.51e-80 | 262 |
| Msa0833080 | MtrunA17_Chr1g0189251 | 39.888 | 356 | 185 | 7 | 45 | 375 | 30 | 381 | 4.99e-80 | 261 |
| Msa0833080 | MtrunA17_Chr8g0344331 | 41.162 | 396 | 198 | 10 | 39 | 409 | 32 | 417 | 1.32e-79 | 261 |
| Msa0833080 | MtrunA17_Chr8g0345961 | 38.863 | 422 | 207 | 12 | 10 | 409 | 7 | 399 | 2.01e-78 | 257 |
| Msa0833080 | MtrunA17_Chr8g0345991 | 39.378 | 386 | 197 | 9 | 45 | 409 | 29 | 398 | 2.28e-77 | 254 |
| Msa0833080 | MtrunA17_Chr7g0246461 | 39.048 | 420 | 200 | 12 | 12 | 409 | 1 | 386 | 3.20e-77 | 253 |
| Msa0833080 | MtrunA17_Chr7g0248861 | 39.901 | 406 | 195 | 11 | 39 | 411 | 24 | 413 | 1.94e-75 | 251 |
| Msa0833080 | MtrunA17_Chr7g0248861 | 48.101 | 237 | 105 | 7 | 136 | 357 | 626 | 859 | 1.78e-52 | 188 |
| Msa0833080 | MtrunA17_Chr7g0276151 | 39.323 | 384 | 203 | 7 | 18 | 378 | 8 | 384 | 4.18e-75 | 248 |
| Msa0833080 | MtrunA17_Chr7g0248871 | 39.303 | 402 | 196 | 12 | 2 | 375 | 1 | 382 | 2.23e-74 | 246 |
| Msa0833080 | MtrunA17_Chr8g0345981 | 40.000 | 365 | 188 | 9 | 38 | 377 | 25 | 383 | 1.07e-73 | 244 |
| Msa0833080 | MtrunA17_Chr7g0266051 | 40.166 | 361 | 192 | 10 | 64 | 410 | 18 | 368 | 2.21e-72 | 240 |
| Msa0833080 | MtrunA17_Chr3g0120521 | 37.594 | 399 | 214 | 10 | 42 | 408 | 28 | 423 | 1.64e-71 | 239 |
| Msa0833080 | MtrunA17_Chr8g0377961 | 38.795 | 415 | 217 | 11 | 22 | 408 | 28 | 433 | 4.51e-71 | 238 |
| Msa0833080 | MtrunA17_Chr7g0246451 | 39.130 | 345 | 190 | 7 | 78 | 410 | 74 | 410 | 1.04e-69 | 234 |
| Msa0833080 | MtrunA17_Chr3g0136151 | 41.972 | 355 | 174 | 11 | 81 | 411 | 64 | 410 | 2.73e-69 | 233 |
| Msa0833080 | MtrunA17_Chr4g0076611 | 39.266 | 354 | 185 | 8 | 81 | 408 | 1 | 350 | 2.05e-68 | 229 |
| Msa0833080 | MtrunA17_Chr3g0134621 | 37.890 | 417 | 196 | 9 | 8 | 409 | 9 | 377 | 2.08e-68 | 230 |
| Msa0833080 | MtrunA17_Chr3g0143241 | 35.981 | 428 | 242 | 12 | 2 | 411 | 1 | 414 | 6.00e-68 | 225 |
| Msa0833080 | MtrunA17_Chr2g0303881 | 38.667 | 375 | 187 | 9 | 64 | 410 | 16 | 375 | 7.58e-68 | 228 |
| Msa0833080 | MtrunA17_Chr2g0285111 | 36.893 | 412 | 216 | 11 | 40 | 408 | 26 | 436 | 8.28e-67 | 226 |
| Msa0833080 | MtrunA17_Chr8g0351011 | 40.290 | 345 | 182 | 9 | 78 | 408 | 80 | 414 | 1.33e-66 | 225 |
| Msa0833080 | MtrunA17_Chr3g0143251 | 36.385 | 426 | 242 | 10 | 2 | 411 | 1 | 413 | 1.34e-66 | 226 |
| Msa0833080 | MtrunA17_Chr8g0354771 | 38.776 | 392 | 207 | 11 | 45 | 408 | 26 | 412 | 1.53e-65 | 223 |
| Msa0833080 | MtrunA17_Chr8g0376841 | 37.288 | 354 | 189 | 10 | 78 | 408 | 75 | 418 | 1.90e-64 | 216 |
| Msa0833080 | MtrunA17_Chr4g0057471 | 39.155 | 355 | 188 | 9 | 78 | 408 | 9 | 359 | 2.21e-64 | 219 |
| Msa0833080 | MtrunA17_Chr2g0285121 | 37.600 | 375 | 179 | 11 | 81 | 408 | 67 | 433 | 8.01e-64 | 218 |
| Msa0833080 | MtrunA17_Chr4g0057531 | 38.827 | 358 | 188 | 9 | 78 | 408 | 74 | 427 | 1.25e-62 | 215 |
| Msa0833080 | MtrunA17_Chr4g0057481 | 41.748 | 309 | 157 | 7 | 121 | 408 | 34 | 340 | 1.80e-62 | 213 |
| Msa0833080 | MtrunA17_Chr8g0369891 | 39.548 | 354 | 181 | 11 | 82 | 411 | 74 | 418 | 2.98e-61 | 211 |
| Msa0833080 | MtrunA17_Chr3g0079971 | 38.251 | 366 | 198 | 9 | 4 | 360 | 2 | 348 | 3.65e-61 | 210 |
| Msa0833080 | MtrunA17_Chr6g0480721 | 40.264 | 303 | 165 | 6 | 85 | 377 | 9 | 305 | 5.92e-61 | 208 |
| Msa0833080 | MtrunA17_Chr5g0407701 | 38.177 | 351 | 184 | 10 | 82 | 408 | 69 | 410 | 1.07e-60 | 209 |
| Msa0833080 | MtrunA17_Chr1g0146271 | 35.457 | 361 | 214 | 6 | 5 | 360 | 3 | 349 | 8.36e-60 | 207 |
| Msa0833080 | MtrunA17_Chr7g0261691 | 39.929 | 283 | 146 | 7 | 146 | 408 | 7 | 285 | 1.61e-59 | 197 |
| Msa0833080 | MtrunA17_Chr4g0026641 | 41.620 | 358 | 171 | 13 | 78 | 408 | 62 | 408 | 1.95e-59 | 206 |
| Msa0833080 | MtrunA17_Chr6g0470851 | 34.853 | 373 | 211 | 8 | 57 | 408 | 30 | 391 | 1.99e-59 | 206 |
| Msa0833080 | MtrunA17_Chr1g0170081 | 33.580 | 405 | 253 | 8 | 6 | 408 | 4 | 394 | 2.00e-59 | 206 |
| Msa0833080 | MtrunA17_Chr8g0334521 | 32.918 | 401 | 243 | 8 | 12 | 408 | 18 | 396 | 2.95e-59 | 205 |
| Msa0833080 | MtrunA17_Chr7g0250481 | 37.293 | 362 | 189 | 13 | 78 | 408 | 72 | 426 | 4.11e-59 | 206 |
| Msa0833080 | MtrunA17_Chr6g0470881 | 35.106 | 376 | 206 | 9 | 57 | 408 | 30 | 391 | 2.70e-58 | 202 |
| Msa0833080 | MtrunA17_Chr1g0146251 | 35.457 | 361 | 214 | 6 | 5 | 360 | 3 | 349 | 2.83e-58 | 202 |
| Msa0833080 | MtrunA17_Chr7g0227991 | 37.676 | 284 | 172 | 3 | 78 | 360 | 72 | 351 | 3.89e-57 | 199 |
| Msa0833080 | MtrunA17_Chr8g0354741 | 43.071 | 267 | 142 | 5 | 150 | 408 | 21 | 285 | 8.19e-56 | 194 |
| Msa0833080 | MtrunA17_Chr3g0097061 | 37.793 | 299 | 173 | 7 | 115 | 408 | 9 | 299 | 5.71e-55 | 188 |
| Msa0833080 | MtrunA17_Chr4g0026651 | 39.564 | 321 | 132 | 12 | 96 | 362 | 2 | 314 | 1.35e-54 | 183 |
| Msa0833080 | MtrunA17_Chr7g0250391 | 36.119 | 371 | 201 | 12 | 69 | 409 | 63 | 427 | 2.20e-53 | 189 |
| Msa0833080 | MtrunA17_Chr7g0250461 | 35.556 | 360 | 200 | 12 | 78 | 409 | 73 | 428 | 4.22e-53 | 184 |
| Msa0833080 | MtrunA17_Chr7g0250411 | 35.833 | 360 | 199 | 12 | 78 | 409 | 73 | 428 | 2.81e-52 | 187 |
| Msa0833080 | MtrunA17_Chr8g0334491 | 34.593 | 344 | 207 | 7 | 26 | 360 | 18 | 352 | 1.02e-51 | 184 |
| Msa0833080 | MtrunA17_Chr7g0250331 | 36.364 | 374 | 202 | 12 | 69 | 410 | 64 | 433 | 1.89e-51 | 184 |
| Msa0833080 | MtrunA17_Chr5g0423261 | 41.176 | 272 | 141 | 6 | 155 | 408 | 2 | 272 | 3.93e-51 | 181 |
| Msa0833080 | MtrunA17_Chr7g0250371 | 35.967 | 367 | 205 | 12 | 69 | 408 | 64 | 427 | 2.20e-50 | 181 |
| Msa0833080 | MtrunA17_Chr4g0057491 | 41.392 | 273 | 137 | 8 | 156 | 408 | 3 | 272 | 2.82e-50 | 179 |
| Msa0833080 | MtrunA17_Chr4g0057461 | 38.828 | 273 | 144 | 6 | 156 | 408 | 3 | 272 | 8.96e-50 | 178 |
| Msa0833080 | MtrunA17_Chr4g0057511 | 40.909 | 264 | 135 | 6 | 163 | 408 | 6 | 266 | 5.65e-48 | 172 |
| Msa0833080 | MtrunA17_Chr2g0302951 | 36.158 | 354 | 198 | 8 | 82 | 408 | 110 | 462 | 3.59e-47 | 172 |
| Msa0833080 | MtrunA17_Chr2g0298601 | 35.667 | 300 | 167 | 7 | 82 | 357 | 90 | 387 | 1.55e-46 | 171 |
| Msa0833080 | MtrunA17_Chr4g0071871 | 35.099 | 302 | 170 | 7 | 80 | 357 | 88 | 387 | 3.68e-46 | 169 |
| Msa0833080 | MtrunA17_Chr3g0105461 | 33.884 | 363 | 181 | 9 | 2 | 351 | 1 | 317 | 3.07e-45 | 160 |
| Msa0833080 | MtrunA17_Chr2g0301011 | 35.017 | 297 | 162 | 7 | 115 | 408 | 9 | 277 | 3.63e-41 | 152 |
| Msa0833080 | MtrunA17_Chr8g0380961 | 31.608 | 367 | 221 | 8 | 15 | 351 | 43 | 409 | 9.45e-41 | 154 |
| Msa0833080 | MtrunA17_Chr8g0346361 | 39.906 | 213 | 123 | 3 | 171 | 381 | 6 | 215 | 9.97e-41 | 151 |
| Msa0833080 | MtrunA17_Chr5g0439271 | 43.204 | 206 | 106 | 5 | 213 | 408 | 40 | 244 | 3.60e-40 | 151 |
| Msa0833080 | MtrunA17_Chr2g0312841 | 41.243 | 177 | 101 | 2 | 169 | 344 | 9 | 183 | 4.87e-40 | 141 |
| Msa0833080 | MtrunA17_Chr2g0301911 | 38.342 | 193 | 116 | 2 | 169 | 360 | 30 | 220 | 3.77e-38 | 141 |
| Msa0833080 | MtrunA17_Chr4g0075331 | 34.314 | 306 | 167 | 9 | 84 | 363 | 17 | 314 | 7.15e-37 | 142 |
| Msa0833080 | MtrunA17_Chr4g0035881 | 47.222 | 144 | 70 | 2 | 217 | 356 | 4 | 145 | 1.05e-29 | 117 |
| Msa0833080 | MtrunA17_Chr3g0103061 | 32.584 | 267 | 139 | 7 | 17 | 254 | 5 | 259 | 1.81e-29 | 115 |
| Msa0833080 | MtrunA17_Chr5g0436021 | 41.875 | 160 | 86 | 4 | 190 | 344 | 30 | 187 | 4.07e-27 | 106 |
| Msa0833080 | MtrunA17_Chr3g0142981 | 41.830 | 153 | 55 | 3 | 209 | 356 | 51 | 174 | 2.30e-24 | 99.8 |
| Msa0833080 | MtrunA17_Chr3g0103071 | 40.000 | 145 | 84 | 3 | 266 | 408 | 1 | 144 | 8.81e-22 | 94.7 |
| Msa0833080 | MtrunA17_Chr2g0301021 | 27.458 | 295 | 136 | 8 | 124 | 408 | 98 | 324 | 9.54e-21 | 93.2 |
| Msa0833080 | MtrunA17_Chr5g0447171 | 39.167 | 120 | 70 | 2 | 291 | 408 | 6 | 124 | 2.98e-18 | 86.7 |
| Msa0833080 | MtrunA17_Chr3g0143021 | 38.000 | 100 | 62 | 0 | 81 | 180 | 7 | 106 | 3.43e-16 | 74.3 |
| Msa0833080 | MtrunA17_Chr5g0439281 | 30.000 | 190 | 107 | 5 | 7 | 181 | 2 | 180 | 4.89e-14 | 70.5 |
| Msa0833080 | MtrunA17_Chr3g0143011 | 51.786 | 56 | 27 | 0 | 305 | 360 | 2 | 57 | 7.14e-13 | 63.5 |
| Msa0833080 | MtrunA17_Chr5g0434941 | 44.000 | 75 | 36 | 2 | 271 | 340 | 1 | 74 | 9.57e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833080 | AT3G14067.1 | 40.573 | 419 | 210 | 9 | 11 | 409 | 8 | 407 | 2.31e-95 | 303 |
| Msa0833080 | AT5G67360.1 | 44.125 | 383 | 188 | 10 | 44 | 409 | 31 | 404 | 2.18e-91 | 291 |
| Msa0833080 | AT3G14240.1 | 44.125 | 383 | 193 | 8 | 44 | 409 | 27 | 405 | 2.80e-88 | 284 |
| Msa0833080 | AT4G34980.1 | 39.430 | 421 | 215 | 11 | 8 | 409 | 1 | 400 | 1.06e-85 | 277 |
| Msa0833080 | AT2G05920.1 | 45.103 | 388 | 185 | 9 | 38 | 409 | 23 | 398 | 6.26e-84 | 272 |
| Msa0833080 | AT1G04110.1 | 40.657 | 396 | 197 | 10 | 44 | 409 | 27 | 414 | 9.10e-84 | 272 |
| Msa0833080 | AT5G03620.2 | 39.078 | 412 | 218 | 12 | 17 | 409 | 9 | 406 | 2.05e-79 | 256 |
| Msa0833080 | AT1G01900.1 | 39.793 | 387 | 196 | 10 | 44 | 408 | 43 | 414 | 4.88e-79 | 259 |
| Msa0833080 | AT5G03620.1 | 39.048 | 420 | 219 | 13 | 9 | 409 | 5 | 406 | 8.37e-78 | 256 |
| Msa0833080 | AT5G51750.1 | 38.955 | 421 | 221 | 11 | 16 | 409 | 11 | 422 | 1.55e-77 | 256 |
| Msa0833080 | AT5G67090.1 | 37.108 | 415 | 212 | 9 | 17 | 409 | 5 | 392 | 4.20e-75 | 248 |
| Msa0833080 | AT5G59090.1 | 38.830 | 376 | 218 | 7 | 39 | 410 | 27 | 394 | 9.35e-74 | 244 |
| Msa0833080 | AT5G59090.2 | 38.830 | 376 | 218 | 7 | 39 | 410 | 27 | 394 | 1.14e-73 | 244 |
| Msa0833080 | AT5G59100.1 | 41.543 | 337 | 188 | 7 | 78 | 409 | 68 | 400 | 3.74e-72 | 240 |
| Msa0833080 | AT5G59090.3 | 38.830 | 376 | 216 | 8 | 39 | 410 | 27 | 392 | 6.08e-72 | 240 |
| Msa0833080 | AT5G59810.1 | 38.107 | 391 | 213 | 8 | 44 | 408 | 41 | 428 | 1.17e-71 | 240 |
| Msa0833080 | AT3G46850.1 | 34.901 | 404 | 256 | 5 | 10 | 409 | 1 | 401 | 3.48e-70 | 235 |
| Msa0833080 | AT3G46840.1 | 37.186 | 398 | 238 | 8 | 18 | 409 | 10 | 401 | 2.11e-69 | 233 |
| Msa0833080 | AT2G04160.1 | 37.228 | 368 | 211 | 5 | 61 | 408 | 55 | 422 | 2.65e-69 | 233 |
| Msa0833080 | AT1G32940.3 | 38.631 | 409 | 208 | 13 | 31 | 408 | 23 | 419 | 3.81e-69 | 229 |
| Msa0833080 | AT5G59130.2 | 34.406 | 404 | 246 | 8 | 10 | 409 | 7 | 395 | 2.93e-68 | 230 |
| Msa0833080 | AT5G59130.4 | 34.406 | 404 | 246 | 8 | 10 | 409 | 7 | 395 | 3.72e-68 | 229 |
| Msa0833080 | AT1G32940.1 | 38.631 | 409 | 208 | 13 | 31 | 408 | 23 | 419 | 5.12e-68 | 230 |
| Msa0833080 | AT5G59130.3 | 38.922 | 334 | 191 | 7 | 80 | 409 | 32 | 356 | 9.98e-68 | 228 |
| Msa0833080 | AT5G59130.1 | 34.653 | 404 | 241 | 9 | 10 | 409 | 7 | 391 | 2.00e-67 | 228 |
| Msa0833080 | AT5G45650.2 | 36.782 | 435 | 201 | 14 | 32 | 408 | 21 | 439 | 3.14e-67 | 228 |
| Msa0833080 | AT5G45650.1 | 36.782 | 435 | 201 | 14 | 32 | 408 | 21 | 439 | 3.14e-67 | 228 |
| Msa0833080 | AT4G10550.1 | 35.484 | 434 | 238 | 11 | 5 | 408 | 3 | 424 | 4.63e-67 | 228 |
| Msa0833080 | AT4G00230.2 | 40.634 | 347 | 178 | 8 | 78 | 408 | 71 | 405 | 1.07e-66 | 223 |
| Msa0833080 | AT5G59120.1 | 38.770 | 374 | 209 | 8 | 45 | 410 | 32 | 393 | 3.45e-66 | 224 |
| Msa0833080 | AT4G10540.1 | 36.792 | 424 | 229 | 11 | 15 | 408 | 6 | 420 | 3.59e-66 | 225 |
| Msa0833080 | AT1G32940.4 | 40.000 | 370 | 187 | 11 | 69 | 408 | 4 | 368 | 1.21e-65 | 223 |
| Msa0833080 | AT1G32940.2 | 40.000 | 370 | 187 | 11 | 69 | 408 | 4 | 368 | 1.21e-65 | 223 |
| Msa0833080 | AT1G20160.3 | 39.714 | 350 | 187 | 9 | 81 | 411 | 67 | 411 | 1.81e-65 | 219 |
| Msa0833080 | AT4G00230.1 | 40.634 | 347 | 178 | 8 | 78 | 408 | 71 | 405 | 2.39e-65 | 222 |
| Msa0833080 | AT4G10550.3 | 36.232 | 414 | 227 | 10 | 28 | 408 | 31 | 440 | 2.88e-65 | 223 |
| Msa0833080 | AT1G32960.1 | 38.191 | 398 | 204 | 12 | 45 | 408 | 33 | 422 | 5.97e-65 | 222 |
| Msa0833080 | AT4G10530.1 | 37.105 | 380 | 203 | 9 | 8 | 361 | 1 | 370 | 9.38e-65 | 221 |
| Msa0833080 | AT5G58840.2 | 41.333 | 300 | 168 | 5 | 80 | 378 | 71 | 363 | 3.07e-64 | 213 |
| Msa0833080 | AT1G20160.2 | 39.714 | 350 | 187 | 9 | 81 | 411 | 28 | 372 | 3.92e-64 | 219 |
| Msa0833080 | AT1G20160.1 | 39.714 | 350 | 187 | 9 | 81 | 411 | 67 | 411 | 6.44e-64 | 219 |
| Msa0833080 | AT5G58820.1 | 42.434 | 304 | 162 | 7 | 80 | 379 | 65 | 359 | 1.65e-63 | 216 |
| Msa0833080 | AT4G10550.4 | 38.211 | 369 | 195 | 8 | 69 | 408 | 4 | 368 | 2.02e-63 | 217 |
| Msa0833080 | AT4G10550.2 | 38.211 | 369 | 195 | 8 | 69 | 408 | 4 | 368 | 2.02e-63 | 217 |
| Msa0833080 | AT1G66210.1 | 37.569 | 362 | 196 | 7 | 14 | 351 | 15 | 370 | 3.04e-63 | 217 |
| Msa0833080 | AT5G58840.3 | 41.333 | 300 | 168 | 5 | 80 | 378 | 71 | 363 | 3.16e-63 | 213 |
| Msa0833080 | AT4G10520.1 | 36.605 | 377 | 205 | 9 | 8 | 361 | 1 | 366 | 7.64e-63 | 216 |
| Msa0833080 | AT5G58840.1 | 41.333 | 300 | 168 | 5 | 80 | 378 | 71 | 363 | 5.88e-62 | 213 |
| Msa0833080 | AT5G59190.1 | 37.879 | 330 | 197 | 5 | 81 | 409 | 32 | 354 | 6.68e-62 | 212 |
| Msa0833080 | AT1G32950.1 | 37.913 | 393 | 211 | 11 | 45 | 408 | 30 | 418 | 1.78e-61 | 212 |
| Msa0833080 | AT4G10510.1 | 36.364 | 396 | 218 | 9 | 42 | 408 | 20 | 410 | 6.57e-61 | 211 |
| Msa0833080 | AT1G20150.1 | 39.368 | 348 | 185 | 10 | 85 | 409 | 69 | 413 | 9.52e-61 | 210 |
| Msa0833080 | AT4G10510.3 | 34.642 | 433 | 241 | 10 | 5 | 408 | 3 | 422 | 1.06e-60 | 210 |
| Msa0833080 | AT1G66220.1 | 38.529 | 340 | 185 | 6 | 45 | 360 | 38 | 377 | 2.04e-60 | 209 |
| Msa0833080 | AT5G58830.1 | 41.000 | 300 | 164 | 7 | 80 | 375 | 69 | 359 | 3.46e-60 | 207 |
| Msa0833080 | AT1G32950.2 | 38.859 | 368 | 193 | 10 | 69 | 408 | 4 | 367 | 2.06e-59 | 206 |
| Msa0833080 | AT4G10510.4 | 37.500 | 368 | 197 | 8 | 69 | 408 | 4 | 366 | 6.78e-59 | 204 |
| Msa0833080 | AT4G10510.2 | 37.921 | 356 | 188 | 8 | 81 | 408 | 1 | 351 | 1.04e-58 | 204 |
| Msa0833080 | AT4G21650.1 | 37.027 | 370 | 185 | 11 | 45 | 370 | 42 | 407 | 1.94e-58 | 204 |
| Msa0833080 | AT4G21630.1 | 34.684 | 395 | 222 | 9 | 11 | 370 | 7 | 400 | 1.45e-57 | 201 |
| Msa0833080 | AT4G15040.2 | 38.739 | 333 | 192 | 7 | 78 | 409 | 30 | 351 | 3.80e-56 | 196 |
| Msa0833080 | AT4G15040.1 | 38.739 | 333 | 192 | 7 | 78 | 409 | 30 | 351 | 3.80e-56 | 196 |
| Msa0833080 | AT5G11940.1 | 37.879 | 330 | 169 | 8 | 68 | 361 | 62 | 391 | 1.16e-55 | 196 |
| Msa0833080 | AT4G21640.1 | 33.924 | 395 | 221 | 10 | 5 | 362 | 3 | 394 | 1.59e-55 | 195 |
| Msa0833080 | AT5G45640.1 | 36.757 | 370 | 178 | 12 | 90 | 408 | 39 | 403 | 1.92e-54 | 192 |
| Msa0833080 | AT4G21326.1 | 35.331 | 317 | 181 | 7 | 78 | 371 | 13 | 328 | 5.17e-52 | 185 |
| Msa0833080 | AT4G21323.1 | 38.462 | 312 | 166 | 8 | 81 | 367 | 118 | 428 | 6.10e-52 | 186 |
| Msa0833080 | AT1G30600.1 | 32.533 | 458 | 242 | 14 | 8 | 408 | 1 | 448 | 2.00e-50 | 182 |
| Msa0833080 | AT5G44530.3 | 34.358 | 358 | 199 | 10 | 82 | 408 | 106 | 458 | 2.05e-48 | 174 |
| Msa0833080 | AT5G44530.2 | 34.358 | 358 | 199 | 10 | 82 | 408 | 106 | 458 | 1.33e-47 | 174 |
| Msa0833080 | AT5G44530.1 | 34.358 | 358 | 199 | 10 | 82 | 408 | 106 | 458 | 1.72e-47 | 174 |
| Msa0833080 | AT4G20430.2 | 32.609 | 368 | 204 | 8 | 82 | 409 | 119 | 482 | 4.46e-47 | 172 |
| Msa0833080 | AT2G39850.1 | 38.462 | 299 | 150 | 11 | 79 | 358 | 63 | 346 | 4.76e-47 | 172 |
| Msa0833080 | AT4G20430.3 | 35.644 | 303 | 170 | 6 | 82 | 360 | 119 | 420 | 7.70e-47 | 172 |
| Msa0833080 | AT4G20430.1 | 35.644 | 303 | 170 | 6 | 82 | 360 | 119 | 420 | 7.70e-47 | 172 |
| Msa0833080 | AT2G19170.1 | 33.427 | 356 | 207 | 10 | 80 | 408 | 84 | 436 | 3.10e-44 | 164 |
| Msa0833080 | AT2G19170.2 | 33.427 | 356 | 207 | 10 | 80 | 408 | 84 | 436 | 3.10e-44 | 164 |
| Msa0833080 | AT4G26330.2 | 35.922 | 309 | 171 | 10 | 81 | 362 | 21 | 329 | 4.82e-43 | 160 |
| Msa0833080 | AT4G30020.3 | 33.053 | 357 | 208 | 11 | 80 | 408 | 84 | 437 | 1.34e-41 | 157 |
| Msa0833080 | AT4G30020.1 | 33.053 | 357 | 208 | 11 | 80 | 408 | 84 | 437 | 1.34e-41 | 157 |
| Msa0833080 | AT4G30020.4 | 33.053 | 357 | 208 | 11 | 80 | 408 | 84 | 437 | 1.34e-41 | 157 |
| Msa0833080 | AT4G30020.2 | 33.053 | 357 | 208 | 11 | 80 | 408 | 84 | 437 | 1.34e-41 | 157 |
| Msa0833080 | AT4G26330.1 | 34.365 | 323 | 171 | 11 | 81 | 362 | 21 | 343 | 1.09e-39 | 151 |
| Msa0833080 | AT1G32970.1 | 43.077 | 195 | 93 | 6 | 204 | 385 | 168 | 357 | 1.38e-34 | 136 |
| Msa0833080 | AT1G62340.1 | 33.119 | 311 | 176 | 10 | 82 | 363 | 98 | 405 | 1.10e-33 | 134 |
Find 82 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCAGATCAATGTTCTTTA+AGG | 0.079089 | 5_4:+6261383 | None:intergenic |
| AACTCACAGTCCAACTTTCT+TGG | 0.265626 | 5_4:-6262198 | Msa0833080:CDS |
| CTTGTATATGCAGGCTCATT+TGG | 0.276375 | 5_4:-6261450 | Msa0833080:CDS |
| CAGCAAATACTGATGTAATT+TGG | 0.285021 | 5_4:+6262495 | None:intergenic |
| CTTGGAAAAGGTGTCATAAT+TGG | 0.287279 | 5_4:-6262137 | Msa0833080:CDS |
| TGCCGCCACCACCTGCAAAA+TGG | 0.312039 | 5_4:-6262061 | Msa0833080:CDS |
| TGAAGAGACATGGCCTCTTC+TGG | 0.313100 | 5_4:+6262275 | None:intergenic |
| CTATCCCTTTCACTTCGTTT+AGG | 0.318433 | 5_4:-6261729 | Msa0833080:CDS |
| TATGCAGGCTCATTTGGATT+TGG | 0.325974 | 5_4:-6261444 | Msa0833080:CDS |
| TGTAATGAAAGTGTCCTTTC+AGG | 0.333163 | 5_4:+6262224 | None:intergenic |
| AATCAGTCTTTGTGTCTTCC+AGG | 0.338756 | 5_4:-6261408 | Msa0833080:CDS |
| TTCAGCGCATTGAATGTTAT+CGG | 0.350080 | 5_4:+6261803 | None:intergenic |
| TACATTGCTAAGTGAGCATT+AGG | 0.357002 | 5_4:+6261837 | None:intergenic |
| AATCAGAAGATTTGCATAGT+TGG | 0.366643 | 5_4:-6262391 | Msa0833080:CDS |
| GCAAAAGCACCAATTGCAAT+TGG | 0.372818 | 5_4:+6261684 | None:intergenic |
| ACTCACAGTCCAACTTTCTT+GGG | 0.407161 | 5_4:-6262197 | Msa0833080:CDS |
| AATTGTTCAGAAAAGTCTTT+CGG | 0.408367 | 5_4:+6261480 | None:intergenic |
| TGAAGCAAGGGCAAGGGTTG+TGG | 0.418304 | 5_4:-6262172 | Msa0833080:CDS |
| TCAATGTTCTTTAAGGATCC+TGG | 0.421213 | 5_4:+6261390 | None:intergenic |
| ACAAAGACTGATTCTGTGTC+TGG | 0.421506 | 5_4:+6261418 | None:intergenic |
| AAGGATCCAAGGAGCTTCAT+TGG | 0.426872 | 5_4:+6261593 | None:intergenic |
| GCATCAGCAAAGCTAGGAAA+TGG | 0.429332 | 5_4:-6261534 | Msa0833080:CDS |
| TCTTACCGCCATGTAGCCTC+TGG | 0.437407 | 5_4:-6262317 | Msa0833080:CDS |
| TTTGAAGACCCAATTGCAAT+TGG | 0.438577 | 5_4:-6261693 | Msa0833080:CDS |
| TCGTTGAATGATGGATGATA+AGG | 0.440505 | 5_4:+6262092 | None:intergenic |
| TGCTTCAGACCCAAGAAAGT+TGG | 0.445653 | 5_4:+6262188 | None:intergenic |
| GCAATTGGGTCTTCAAAGAA+TGG | 0.453919 | 5_4:+6261699 | None:intergenic |
| TGACAGCTGCATAGTGTAGT+TGG | 0.454099 | 5_4:+6262556 | None:intergenic |
| CTCTCTCCAATGAAGCTCCT+TGG | 0.473001 | 5_4:-6261599 | Msa0833080:CDS |
| ATTTCCTCACAAGGACAGAA+TGG | 0.476874 | 5_4:-6262345 | Msa0833080:CDS |
| AGTTGCTCTGCTGCAAACTC+TGG | 0.483255 | 5_4:-6261636 | Msa0833080:CDS |
| CGTTGAATGATGGATGATAA+GGG | 0.484847 | 5_4:+6262093 | None:intergenic |
| CAAAAGCACCAATTGCAATT+GGG | 0.494429 | 5_4:+6261685 | None:intergenic |
| CTGCAAATCCAGAGGCTACA+TGG | 0.494461 | 5_4:+6262309 | None:intergenic |
| TTGGAGAGAGTGTTGTATCC+AGG | 0.498111 | 5_4:+6261612 | None:intergenic |
| ATGCAAATCTTCTGATTGAA+AGG | 0.503608 | 5_4:+6262397 | None:intergenic |
| CATCCATCATTCAACGATGA+AGG | 0.504008 | 5_4:-6262086 | Msa0833080:CDS |
| TTGGGTCTGAAGCAAGGGCA+AGG | 0.512292 | 5_4:-6262179 | Msa0833080:CDS |
| ATCAATTGTGCTGGCACCAA+CGG | 0.512655 | 5_4:+6261569 | None:intergenic |
| CTTTCTTGGGTCTGAAGCAA+GGG | 0.513397 | 5_4:-6262184 | Msa0833080:CDS |
| GTTCAGAAAAGTCTTTCGGT+TGG | 0.514769 | 5_4:+6261484 | None:intergenic |
| ACTTTCTTGGGTCTGAAGCA+AGG | 0.515460 | 5_4:-6262185 | Msa0833080:CDS |
| ATCTTTCTCTTGAAGAGACA+TGG | 0.517045 | 5_4:+6262265 | None:intergenic |
| CAGCAGCAGTGTGTGTTCCA+TGG | 0.520277 | 5_4:+6261931 | None:intergenic |
| ATTCCTTCATCGTTGAATGA+TGG | 0.520909 | 5_4:+6262083 | None:intergenic |
| TTATTGCCACTTGTATATGC+AGG | 0.520967 | 5_4:-6261459 | Msa0833080:CDS |
| CACACTGCTGCTGAGGCTGC+AGG | 0.522441 | 5_4:-6261921 | Msa0833080:CDS |
| TCTGCTGCAAACTCTGGTCC+TGG | 0.523412 | 5_4:-6261630 | Msa0833080:CDS |
| GAGAACCTAAACGAAGTGAA+AGG | 0.525646 | 5_4:+6261724 | None:intergenic |
| AAAGGCCATTGCGAATTCAC+TGG | 0.527872 | 5_4:-6262038 | Msa0833080:CDS |
| TACATCAGTATTTGCTGCAG+AGG | 0.530978 | 5_4:-6262489 | Msa0833080:CDS |
| GTGAGCATTAGGTGCCATAC+CGG | 0.534767 | 5_4:+6261848 | None:intergenic |
| GGAAATGGAAATGAATATGA+AGG | 0.535360 | 5_4:-6261519 | Msa0833080:CDS |
| GAAAAGTAGTGGTGTGTGAT+GGG | 0.535631 | 5_4:-6261359 | Msa0833080:CDS |
| AGAACCTAAACGAAGTGAAA+GGG | 0.535842 | 5_4:+6261725 | None:intergenic |
| AATGATGATAACCTTGGAAA+AGG | 0.537148 | 5_4:-6262149 | Msa0833080:CDS |
| TTGTGCTGGCACCAACGGTA+AGG | 0.544386 | 5_4:+6261574 | None:intergenic |
| GGAAAAGTAGTGGTGTGTGA+TGG | 0.557292 | 5_4:-6261360 | Msa0833080:CDS |
| ATTGTAGCATCAGCAAAGCT+AGG | 0.558116 | 5_4:-6261540 | Msa0833080:CDS |
| TGGGTCTGAAGCAAGGGCAA+GGG | 0.558985 | 5_4:-6262178 | Msa0833080:CDS |
| AAGTTCTATCTTAGCTGCAA+TGG | 0.566976 | 5_4:-6261781 | Msa0833080:CDS |
| TAAAGGTGTAGCAGCCGGTA+TGG | 0.567524 | 5_4:-6261862 | Msa0833080:CDS |
| ATGGATATTGCTATTGAAGA+TGG | 0.574799 | 5_4:-6261762 | Msa0833080:CDS |
| CCACCACCTGCAAAATGGAA+AGG | 0.578029 | 5_4:-6262056 | Msa0833080:CDS |
| TGGAACACACACTGCTGCTG+AGG | 0.580264 | 5_4:-6261928 | Msa0833080:CDS |
| GCACCAACGGTAAGGATCCA+AGG | 0.581358 | 5_4:+6261582 | None:intergenic |
| ATATGCAATAATAAGCTCAT+CGG | 0.583974 | 5_4:-6262008 | Msa0833080:CDS |
| GCTCCTTGGATCCTTACCGT+TGG | 0.585586 | 5_4:-6261585 | Msa0833080:CDS |
| TCCCTCCAGTGAATTCGCAA+TGG | 0.587526 | 5_4:+6262033 | None:intergenic |
| AATGCTAAAGGTGTAGCAGC+CGG | 0.601004 | 5_4:-6261867 | Msa0833080:CDS |
| TTAAAGAACATTGATCTGAG+TGG | 0.611550 | 5_4:-6261381 | Msa0833080:CDS |
| GCCATTGCGAATTCACTGGA+GGG | 0.616641 | 5_4:-6262034 | Msa0833080:CDS |
| AGTGAAGCTGACACCAGAAG+AGG | 0.623327 | 5_4:-6262288 | Msa0833080:CDS |
| AAAACCATTCTGTCCTTGTG+AGG | 0.626249 | 5_4:+6262341 | None:intergenic |
| GGCCATTGCGAATTCACTGG+AGG | 0.628448 | 5_4:-6262035 | Msa0833080:CDS |
| AATGAGCCTGCATATACAAG+TGG | 0.633747 | 5_4:+6261453 | None:intergenic |
| TTGTGGAATGATGATAACCT+TGG | 0.635157 | 5_4:-6262155 | Msa0833080:CDS |
| AAAAGTAGTGGTGTGTGATG+GGG | 0.642211 | 5_4:-6261358 | Msa0833080:CDS |
| ATAATTGGAGTCATAGACAC+AGG | 0.654161 | 5_4:-6262122 | Msa0833080:CDS |
| CAGCTTCACTGCAAATCCAG+AGG | 0.669476 | 5_4:+6262301 | None:intergenic |
| TGATCTGAGTGGAAAAGTAG+TGG | 0.685674 | 5_4:-6261370 | Msa0833080:CDS |
| CAAATCCAGAGGCTACATGG+CGG | 0.781016 | 5_4:+6262312 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTTTGTGGAAGAAATGAA+TGG | + | chr5_4:6261550-6261569 | None:intergenic | 25.0% |
| ! | ATATGCAATAATAAGCTCAT+CGG | - | chr5_4:6261905-6261924 | Msa0833080:CDS | 25.0% |
| !! | AATTTTTCTATCAATTGTGC+TGG | + | chr5_4:6262356-6262375 | None:intergenic | 25.0% |
| ! | AATTGTTCAGAAAAGTCTTT+CGG | + | chr5_4:6262436-6262455 | None:intergenic | 25.0% |
| !! | ATTTTTGTGGAAGAAATGAA+TGG | + | chr5_4:6261550-6261569 | None:intergenic | 25.0% |
| ! | ATATGCAATAATAAGCTCAT+CGG | - | chr5_4:6261905-6261924 | Msa0833080:CDS | 25.0% |
| !! | AATTTTTCTATCAATTGTGC+TGG | + | chr5_4:6262356-6262375 | None:intergenic | 25.0% |
| ! | AATTGTTCAGAAAAGTCTTT+CGG | + | chr5_4:6262436-6262455 | None:intergenic | 25.0% |
| CAGCAAATACTGATGTAATT+TGG | + | chr5_4:6261421-6261440 | None:intergenic | 30.0% | |
| ATGCAAATCTTCTGATTGAA+AGG | + | chr5_4:6261519-6261538 | None:intergenic | 30.0% | |
| AATCAGAAGATTTGCATAGT+TGG | - | chr5_4:6261522-6261541 | Msa0833080:CDS | 30.0% | |
| AATGATGATAACCTTGGAAA+AGG | - | chr5_4:6261764-6261783 | Msa0833080:CDS | 30.0% | |
| !! | CCATGGAAATGTTTTTCAAA+TGG | + | chr5_4:6261968-6261987 | None:intergenic | 30.0% |
| CCATTTGAAAAACATTTCCA+TGG | - | chr5_4:6261965-6261984 | Msa0833080:CDS | 30.0% | |
| !!! | AGTGTTTTTGGTAATGCTAA+AGG | - | chr5_4:6262034-6262053 | Msa0833080:CDS | 30.0% |
| ! | ATGGATATTGCTATTGAAGA+TGG | - | chr5_4:6262151-6262170 | Msa0833080:CDS | 30.0% |
| GGAAATGGAAATGAATATGA+AGG | - | chr5_4:6262394-6262413 | Msa0833080:CDS | 30.0% | |
| ACTCAGATCAATGTTCTTTA+AGG | + | chr5_4:6262533-6262552 | None:intergenic | 30.0% | |
| TTAAAGAACATTGATCTGAG+TGG | - | chr5_4:6262532-6262551 | Msa0833080:CDS | 30.0% | |
| CAGCAAATACTGATGTAATT+TGG | + | chr5_4:6261421-6261440 | None:intergenic | 30.0% | |
| ATGCAAATCTTCTGATTGAA+AGG | + | chr5_4:6261519-6261538 | None:intergenic | 30.0% | |
| AATCAGAAGATTTGCATAGT+TGG | - | chr5_4:6261522-6261541 | Msa0833080:CDS | 30.0% | |
| AATGATGATAACCTTGGAAA+AGG | - | chr5_4:6261764-6261783 | Msa0833080:CDS | 30.0% | |
| !! | CCATGGAAATGTTTTTCAAA+TGG | + | chr5_4:6261968-6261987 | None:intergenic | 30.0% |
| CCATTTGAAAAACATTTCCA+TGG | - | chr5_4:6261965-6261984 | Msa0833080:CDS | 30.0% | |
| !!! | AGTGTTTTTGGTAATGCTAA+AGG | - | chr5_4:6262034-6262053 | Msa0833080:CDS | 30.0% |
| ! | ATGGATATTGCTATTGAAGA+TGG | - | chr5_4:6262151-6262170 | Msa0833080:CDS | 30.0% |
| GGAAATGGAAATGAATATGA+AGG | - | chr5_4:6262394-6262413 | Msa0833080:CDS | 30.0% | |
| ACTCAGATCAATGTTCTTTA+AGG | + | chr5_4:6262533-6262552 | None:intergenic | 30.0% | |
| TTAAAGAACATTGATCTGAG+TGG | - | chr5_4:6262532-6262551 | Msa0833080:CDS | 30.0% | |
| TCCACAAAAATTTCCTCACA+AGG | - | chr5_4:6261559-6261578 | Msa0833080:CDS | 35.0% | |
| ! | TCCTTGTGAGGAAATTTTTG+TGG | + | chr5_4:6261563-6261582 | None:intergenic | 35.0% |
| ATCTTTCTCTTGAAGAGACA+TGG | + | chr5_4:6261651-6261670 | None:intergenic | 35.0% | |
| ! | TTTTGTTAGCAAGACCTGAA+AGG | - | chr5_4:6261675-6261694 | Msa0833080:CDS | 35.0% |
| !! | TGTAATGAAAGTGTCCTTTC+AGG | + | chr5_4:6261692-6261711 | None:intergenic | 35.0% |
| TTGTGGAATGATGATAACCT+TGG | - | chr5_4:6261758-6261777 | Msa0833080:CDS | 35.0% | |
| ! | CAATTATGACACCTTTTCCA+AGG | + | chr5_4:6261778-6261797 | None:intergenic | 35.0% |
| !! | CTTGGAAAAGGTGTCATAAT+TGG | - | chr5_4:6261776-6261795 | Msa0833080:CDS | 35.0% |
| ATAATTGGAGTCATAGACAC+AGG | - | chr5_4:6261791-6261810 | Msa0833080:CDS | 35.0% | |
| !! | CGTTGAATGATGGATGATAA+GGG | + | chr5_4:6261823-6261842 | None:intergenic | 35.0% |
| !! | TCGTTGAATGATGGATGATA+AGG | + | chr5_4:6261824-6261843 | None:intergenic | 35.0% |
| ATTCCTTCATCGTTGAATGA+TGG | + | chr5_4:6261833-6261852 | None:intergenic | 35.0% | |
| !! | TGTTTTTCAAATGGAAGCTC+TGG | + | chr5_4:6261959-6261978 | None:intergenic | 35.0% |
| ! | GTAGAAGATGCAAGTGTTTT+TGG | - | chr5_4:6262022-6262041 | Msa0833080:CDS | 35.0% |
| TACATTGCTAAGTGAGCATT+AGG | + | chr5_4:6262079-6262098 | None:intergenic | 35.0% | |
| TTCAGCGCATTGAATGTTAT+CGG | + | chr5_4:6262113-6262132 | None:intergenic | 35.0% | |
| AAGTTCTATCTTAGCTGCAA+TGG | - | chr5_4:6262132-6262151 | Msa0833080:CDS | 35.0% | |
| AGAACCTAAACGAAGTGAAA+GGG | + | chr5_4:6262191-6262210 | None:intergenic | 35.0% | |
| TTTGAAGACCCAATTGCAAT+TGG | - | chr5_4:6262220-6262239 | Msa0833080:CDS | 35.0% | |
| !! | CAAAAGCACCAATTGCAATT+GGG | + | chr5_4:6262231-6262250 | None:intergenic | 35.0% |
| ! | TTATTGCCACTTGTATATGC+AGG | - | chr5_4:6262454-6262473 | Msa0833080:CDS | 35.0% |
| ! | TCAATGTTCTTTAAGGATCC+TGG | + | chr5_4:6262526-6262545 | None:intergenic | 35.0% |
| TCCACAAAAATTTCCTCACA+AGG | - | chr5_4:6261559-6261578 | Msa0833080:CDS | 35.0% | |
| ! | TCCTTGTGAGGAAATTTTTG+TGG | + | chr5_4:6261563-6261582 | None:intergenic | 35.0% |
| ATCTTTCTCTTGAAGAGACA+TGG | + | chr5_4:6261651-6261670 | None:intergenic | 35.0% | |
| ! | TTTTGTTAGCAAGACCTGAA+AGG | - | chr5_4:6261675-6261694 | Msa0833080:CDS | 35.0% |
| !! | TGTAATGAAAGTGTCCTTTC+AGG | + | chr5_4:6261692-6261711 | None:intergenic | 35.0% |
| TTGTGGAATGATGATAACCT+TGG | - | chr5_4:6261758-6261777 | Msa0833080:CDS | 35.0% | |
| ! | CAATTATGACACCTTTTCCA+AGG | + | chr5_4:6261778-6261797 | None:intergenic | 35.0% |
| !! | CTTGGAAAAGGTGTCATAAT+TGG | - | chr5_4:6261776-6261795 | Msa0833080:CDS | 35.0% |
| ATAATTGGAGTCATAGACAC+AGG | - | chr5_4:6261791-6261810 | Msa0833080:CDS | 35.0% | |
| !! | CGTTGAATGATGGATGATAA+GGG | + | chr5_4:6261823-6261842 | None:intergenic | 35.0% |
| !! | TCGTTGAATGATGGATGATA+AGG | + | chr5_4:6261824-6261843 | None:intergenic | 35.0% |
| ATTCCTTCATCGTTGAATGA+TGG | + | chr5_4:6261833-6261852 | None:intergenic | 35.0% | |
| !! | TGTTTTTCAAATGGAAGCTC+TGG | + | chr5_4:6261959-6261978 | None:intergenic | 35.0% |
| ! | GTAGAAGATGCAAGTGTTTT+TGG | - | chr5_4:6262022-6262041 | Msa0833080:CDS | 35.0% |
| TACATTGCTAAGTGAGCATT+AGG | + | chr5_4:6262079-6262098 | None:intergenic | 35.0% | |
| TTCAGCGCATTGAATGTTAT+CGG | + | chr5_4:6262113-6262132 | None:intergenic | 35.0% | |
| AAGTTCTATCTTAGCTGCAA+TGG | - | chr5_4:6262132-6262151 | Msa0833080:CDS | 35.0% | |
| AGAACCTAAACGAAGTGAAA+GGG | + | chr5_4:6262191-6262210 | None:intergenic | 35.0% | |
| TTTGAAGACCCAATTGCAAT+TGG | - | chr5_4:6262220-6262239 | Msa0833080:CDS | 35.0% | |
| !! | CAAAAGCACCAATTGCAATT+GGG | + | chr5_4:6262231-6262250 | None:intergenic | 35.0% |
| ! | TTATTGCCACTTGTATATGC+AGG | - | chr5_4:6262454-6262473 | Msa0833080:CDS | 35.0% |
| ! | TCAATGTTCTTTAAGGATCC+TGG | + | chr5_4:6262526-6262545 | None:intergenic | 35.0% |
| ! | TACATCAGTATTTGCTGCAG+AGG | - | chr5_4:6261424-6261443 | Msa0833080:CDS | 40.0% |
| ATTTCCTCACAAGGACAGAA+TGG | - | chr5_4:6261568-6261587 | Msa0833080:CDS | 40.0% | |
| AAAACCATTCTGTCCTTGTG+AGG | + | chr5_4:6261575-6261594 | None:intergenic | 40.0% | |
| AACTCACAGTCCAACTTTCT+TGG | - | chr5_4:6261715-6261734 | Msa0833080:CDS | 40.0% | |
| ACTCACAGTCCAACTTTCTT+GGG | - | chr5_4:6261716-6261735 | Msa0833080:CDS | 40.0% | |
| CATCCATCATTCAACGATGA+AGG | - | chr5_4:6261827-6261846 | Msa0833080:CDS | 40.0% | |
| CTATCCCTTTCACTTCGTTT+AGG | - | chr5_4:6262184-6262203 | Msa0833080:CDS | 40.0% | |
| GAGAACCTAAACGAAGTGAA+AGG | + | chr5_4:6262192-6262211 | None:intergenic | 40.0% | |
| GCAATTGGGTCTTCAAAGAA+TGG | + | chr5_4:6262217-6262236 | None:intergenic | 40.0% | |
| !! | GCAAAAGCACCAATTGCAAT+TGG | + | chr5_4:6262232-6262251 | None:intergenic | 40.0% |
| ! | GCTTTTGCTGCTACTCAAAA+TGG | - | chr5_4:6262244-6262263 | Msa0833080:CDS | 40.0% |
| ATTGTAGCATCAGCAAAGCT+AGG | - | chr5_4:6262373-6262392 | Msa0833080:CDS | 40.0% | |
| GTTCAGAAAAGTCTTTCGGT+TGG | + | chr5_4:6262432-6262451 | None:intergenic | 40.0% | |
| AATGAGCCTGCATATACAAG+TGG | + | chr5_4:6262463-6262482 | None:intergenic | 40.0% | |
| CTTGTATATGCAGGCTCATT+TGG | - | chr5_4:6262463-6262482 | Msa0833080:CDS | 40.0% | |
| TATGCAGGCTCATTTGGATT+TGG | - | chr5_4:6262469-6262488 | Msa0833080:CDS | 40.0% | |
| ! | ACAAAGACTGATTCTGTGTC+TGG | + | chr5_4:6262498-6262517 | None:intergenic | 40.0% |
| AATCAGTCTTTGTGTCTTCC+AGG | - | chr5_4:6262505-6262524 | Msa0833080:CDS | 40.0% | |
| TGATCTGAGTGGAAAAGTAG+TGG | - | chr5_4:6262543-6262562 | Msa0833080:CDS | 40.0% | |
| GAAAAGTAGTGGTGTGTGAT+GGG | - | chr5_4:6262554-6262573 | Msa0833080:CDS | 40.0% | |
| AAAAGTAGTGGTGTGTGATG+GGG | - | chr5_4:6262555-6262574 | Msa0833080:CDS | 40.0% | |
| ! | TACATCAGTATTTGCTGCAG+AGG | - | chr5_4:6261424-6261443 | Msa0833080:CDS | 40.0% |
| ATTTCCTCACAAGGACAGAA+TGG | - | chr5_4:6261568-6261587 | Msa0833080:CDS | 40.0% | |
| AAAACCATTCTGTCCTTGTG+AGG | + | chr5_4:6261575-6261594 | None:intergenic | 40.0% | |
| AACTCACAGTCCAACTTTCT+TGG | - | chr5_4:6261715-6261734 | Msa0833080:CDS | 40.0% | |
| ACTCACAGTCCAACTTTCTT+GGG | - | chr5_4:6261716-6261735 | Msa0833080:CDS | 40.0% | |
| CATCCATCATTCAACGATGA+AGG | - | chr5_4:6261827-6261846 | Msa0833080:CDS | 40.0% | |
| CTATCCCTTTCACTTCGTTT+AGG | - | chr5_4:6262184-6262203 | Msa0833080:CDS | 40.0% | |
| GAGAACCTAAACGAAGTGAA+AGG | + | chr5_4:6262192-6262211 | None:intergenic | 40.0% | |
| GCAATTGGGTCTTCAAAGAA+TGG | + | chr5_4:6262217-6262236 | None:intergenic | 40.0% | |
| !! | GCAAAAGCACCAATTGCAAT+TGG | + | chr5_4:6262232-6262251 | None:intergenic | 40.0% |
| ! | GCTTTTGCTGCTACTCAAAA+TGG | - | chr5_4:6262244-6262263 | Msa0833080:CDS | 40.0% |
| ATTGTAGCATCAGCAAAGCT+AGG | - | chr5_4:6262373-6262392 | Msa0833080:CDS | 40.0% | |
| GTTCAGAAAAGTCTTTCGGT+TGG | + | chr5_4:6262432-6262451 | None:intergenic | 40.0% | |
| AATGAGCCTGCATATACAAG+TGG | + | chr5_4:6262463-6262482 | None:intergenic | 40.0% | |
| CTTGTATATGCAGGCTCATT+TGG | - | chr5_4:6262463-6262482 | Msa0833080:CDS | 40.0% | |
| TATGCAGGCTCATTTGGATT+TGG | - | chr5_4:6262469-6262488 | Msa0833080:CDS | 40.0% | |
| ! | ACAAAGACTGATTCTGTGTC+TGG | + | chr5_4:6262498-6262517 | None:intergenic | 40.0% |
| AATCAGTCTTTGTGTCTTCC+AGG | - | chr5_4:6262505-6262524 | Msa0833080:CDS | 40.0% | |
| TGATCTGAGTGGAAAAGTAG+TGG | - | chr5_4:6262543-6262562 | Msa0833080:CDS | 40.0% | |
| GAAAAGTAGTGGTGTGTGAT+GGG | - | chr5_4:6262554-6262573 | Msa0833080:CDS | 40.0% | |
| AAAAGTAGTGGTGTGTGATG+GGG | - | chr5_4:6262555-6262574 | Msa0833080:CDS | 40.0% | |
| TGACAGCTGCATAGTGTAGT+TGG | + | chr5_4:6261360-6261379 | None:intergenic | 45.0% | |
| TGCTTCAGACCCAAGAAAGT+TGG | + | chr5_4:6261728-6261747 | None:intergenic | 45.0% | |
| ! | ACTTTCTTGGGTCTGAAGCA+AGG | - | chr5_4:6261728-6261747 | Msa0833080:CDS | 45.0% |
| ! | CTTTCTTGGGTCTGAAGCAA+GGG | - | chr5_4:6261729-6261748 | Msa0833080:CDS | 45.0% |
| ! | CAATGGCCTTTCCATTTTGC+AGG | + | chr5_4:6261866-6261885 | None:intergenic | 45.0% |
| AAAGGCCATTGCGAATTCAC+TGG | - | chr5_4:6261875-6261894 | Msa0833080:CDS | 45.0% | |
| ! | AATGCTAAAGGTGTAGCAGC+CGG | - | chr5_4:6262046-6262065 | Msa0833080:CDS | 45.0% |
| !! | TTGGAGAGAGTGTTGTATCC+AGG | + | chr5_4:6262304-6262323 | None:intergenic | 45.0% |
| AAGGATCCAAGGAGCTTCAT+TGG | + | chr5_4:6262323-6262342 | None:intergenic | 45.0% | |
| ! | ATCAATTGTGCTGGCACCAA+CGG | + | chr5_4:6262347-6262366 | None:intergenic | 45.0% |
| GCATCAGCAAAGCTAGGAAA+TGG | - | chr5_4:6262379-6262398 | Msa0833080:CDS | 45.0% | |
| GGAAAAGTAGTGGTGTGTGA+TGG | - | chr5_4:6262553-6262572 | Msa0833080:CDS | 45.0% | |
| TGACAGCTGCATAGTGTAGT+TGG | + | chr5_4:6261360-6261379 | None:intergenic | 45.0% | |
| TGCTTCAGACCCAAGAAAGT+TGG | + | chr5_4:6261728-6261747 | None:intergenic | 45.0% | |
| ! | ACTTTCTTGGGTCTGAAGCA+AGG | - | chr5_4:6261728-6261747 | Msa0833080:CDS | 45.0% |
| ! | CTTTCTTGGGTCTGAAGCAA+GGG | - | chr5_4:6261729-6261748 | Msa0833080:CDS | 45.0% |
| ! | CAATGGCCTTTCCATTTTGC+AGG | + | chr5_4:6261866-6261885 | None:intergenic | 45.0% |
| AAAGGCCATTGCGAATTCAC+TGG | - | chr5_4:6261875-6261894 | Msa0833080:CDS | 45.0% | |
| ! | AATGCTAAAGGTGTAGCAGC+CGG | - | chr5_4:6262046-6262065 | Msa0833080:CDS | 45.0% |
| !! | TTGGAGAGAGTGTTGTATCC+AGG | + | chr5_4:6262304-6262323 | None:intergenic | 45.0% |
| AAGGATCCAAGGAGCTTCAT+TGG | + | chr5_4:6262323-6262342 | None:intergenic | 45.0% | |
| ! | ATCAATTGTGCTGGCACCAA+CGG | + | chr5_4:6262347-6262366 | None:intergenic | 45.0% |
| GCATCAGCAAAGCTAGGAAA+TGG | - | chr5_4:6262379-6262398 | Msa0833080:CDS | 45.0% | |
| GGAAAAGTAGTGGTGTGTGA+TGG | - | chr5_4:6262553-6262572 | Msa0833080:CDS | 45.0% | |
| CAAATCCAGAGGCTACATGG+CGG | + | chr5_4:6261604-6261623 | None:intergenic | 50.0% | |
| CTGCAAATCCAGAGGCTACA+TGG | + | chr5_4:6261607-6261626 | None:intergenic | 50.0% | |
| CAGCTTCACTGCAAATCCAG+AGG | + | chr5_4:6261615-6261634 | None:intergenic | 50.0% | |
| AGTGAAGCTGACACCAGAAG+AGG | - | chr5_4:6261625-6261644 | Msa0833080:CDS | 50.0% | |
| TGAAGAGACATGGCCTCTTC+TGG | + | chr5_4:6261641-6261660 | None:intergenic | 50.0% | |
| !! | TTCCATTTTGCAGGTGGTGG+CGG | + | chr5_4:6261857-6261876 | None:intergenic | 50.0% |
| ! | CCTTTCCATTTTGCAGGTGG+TGG | + | chr5_4:6261860-6261879 | None:intergenic | 50.0% |
| CCACCACCTGCAAAATGGAA+AGG | - | chr5_4:6261857-6261876 | Msa0833080:CDS | 50.0% | |
| ! | TGGCCTTTCCATTTTGCAGG+TGG | + | chr5_4:6261863-6261882 | None:intergenic | 50.0% |
| GCCATTGCGAATTCACTGGA+GGG | - | chr5_4:6261879-6261898 | Msa0833080:CDS | 50.0% | |
| TCCCTCCAGTGAATTCGCAA+TGG | + | chr5_4:6261883-6261902 | None:intergenic | 50.0% | |
| ! | TAAAGGTGTAGCAGCCGGTA+TGG | - | chr5_4:6262051-6262070 | Msa0833080:CDS | 50.0% |
| ! | GTGAGCATTAGGTGCCATAC+CGG | + | chr5_4:6262068-6262087 | None:intergenic | 50.0% |
| AGTTGCTCTGCTGCAAACTC+TGG | - | chr5_4:6262277-6262296 | Msa0833080:CDS | 50.0% | |
| CTCTCTCCAATGAAGCTCCT+TGG | - | chr5_4:6262314-6262333 | Msa0833080:CDS | 50.0% | |
| CAAATCCAGAGGCTACATGG+CGG | + | chr5_4:6261604-6261623 | None:intergenic | 50.0% | |
| CTGCAAATCCAGAGGCTACA+TGG | + | chr5_4:6261607-6261626 | None:intergenic | 50.0% | |
| CAGCTTCACTGCAAATCCAG+AGG | + | chr5_4:6261615-6261634 | None:intergenic | 50.0% | |
| AGTGAAGCTGACACCAGAAG+AGG | - | chr5_4:6261625-6261644 | Msa0833080:CDS | 50.0% | |
| TGAAGAGACATGGCCTCTTC+TGG | + | chr5_4:6261641-6261660 | None:intergenic | 50.0% | |
| !! | TTCCATTTTGCAGGTGGTGG+CGG | + | chr5_4:6261857-6261876 | None:intergenic | 50.0% |
| ! | CCTTTCCATTTTGCAGGTGG+TGG | + | chr5_4:6261860-6261879 | None:intergenic | 50.0% |
| CCACCACCTGCAAAATGGAA+AGG | - | chr5_4:6261857-6261876 | Msa0833080:CDS | 50.0% | |
| ! | TGGCCTTTCCATTTTGCAGG+TGG | + | chr5_4:6261863-6261882 | None:intergenic | 50.0% |
| GCCATTGCGAATTCACTGGA+GGG | - | chr5_4:6261879-6261898 | Msa0833080:CDS | 50.0% | |
| TCCCTCCAGTGAATTCGCAA+TGG | + | chr5_4:6261883-6261902 | None:intergenic | 50.0% | |
| ! | TAAAGGTGTAGCAGCCGGTA+TGG | - | chr5_4:6262051-6262070 | Msa0833080:CDS | 50.0% |
| ! | GTGAGCATTAGGTGCCATAC+CGG | + | chr5_4:6262068-6262087 | None:intergenic | 50.0% |
| AGTTGCTCTGCTGCAAACTC+TGG | - | chr5_4:6262277-6262296 | Msa0833080:CDS | 50.0% | |
| CTCTCTCCAATGAAGCTCCT+TGG | - | chr5_4:6262314-6262333 | Msa0833080:CDS | 50.0% | |
| TCTTACCGCCATGTAGCCTC+TGG | - | chr5_4:6261596-6261615 | Msa0833080:CDS | 55.0% | |
| ! | TTGGGTCTGAAGCAAGGGCA+AGG | - | chr5_4:6261734-6261753 | Msa0833080:CDS | 55.0% |
| ! | TGGGTCTGAAGCAAGGGCAA+GGG | - | chr5_4:6261735-6261754 | Msa0833080:CDS | 55.0% |
| TGAAGCAAGGGCAAGGGTTG+TGG | - | chr5_4:6261741-6261760 | Msa0833080:CDS | 55.0% | |
| GGCCATTGCGAATTCACTGG+AGG | - | chr5_4:6261878-6261897 | Msa0833080:CDS | 55.0% | |
| CAGCAGCAGTGTGTGTTCCA+TGG | + | chr5_4:6261985-6262004 | None:intergenic | 55.0% | |
| TGGAACACACACTGCTGCTG+AGG | - | chr5_4:6261985-6262004 | Msa0833080:CDS | 55.0% | |
| TCTGCTGCAAACTCTGGTCC+TGG | - | chr5_4:6262283-6262302 | Msa0833080:CDS | 55.0% | |
| GCTCCTTGGATCCTTACCGT+TGG | - | chr5_4:6262328-6262347 | Msa0833080:CDS | 55.0% | |
| GCACCAACGGTAAGGATCCA+AGG | + | chr5_4:6262334-6262353 | None:intergenic | 55.0% | |
| ! | TTGTGCTGGCACCAACGGTA+AGG | + | chr5_4:6262342-6262361 | None:intergenic | 55.0% |
| TCTTACCGCCATGTAGCCTC+TGG | - | chr5_4:6261596-6261615 | Msa0833080:CDS | 55.0% | |
| ! | TTGGGTCTGAAGCAAGGGCA+AGG | - | chr5_4:6261734-6261753 | Msa0833080:CDS | 55.0% |
| ! | TGGGTCTGAAGCAAGGGCAA+GGG | - | chr5_4:6261735-6261754 | Msa0833080:CDS | 55.0% |
| TGAAGCAAGGGCAAGGGTTG+TGG | - | chr5_4:6261741-6261760 | Msa0833080:CDS | 55.0% | |
| GGCCATTGCGAATTCACTGG+AGG | - | chr5_4:6261878-6261897 | Msa0833080:CDS | 55.0% | |
| CAGCAGCAGTGTGTGTTCCA+TGG | + | chr5_4:6261985-6262004 | None:intergenic | 55.0% | |
| TGGAACACACACTGCTGCTG+AGG | - | chr5_4:6261985-6262004 | Msa0833080:CDS | 55.0% | |
| TCTGCTGCAAACTCTGGTCC+TGG | - | chr5_4:6262283-6262302 | Msa0833080:CDS | 55.0% | |
| GCTCCTTGGATCCTTACCGT+TGG | - | chr5_4:6262328-6262347 | Msa0833080:CDS | 55.0% | |
| GCACCAACGGTAAGGATCCA+AGG | + | chr5_4:6262334-6262353 | None:intergenic | 55.0% | |
| ! | TTGTGCTGGCACCAACGGTA+AGG | + | chr5_4:6262342-6262361 | None:intergenic | 55.0% |
| TGCCGCCACCACCTGCAAAA+TGG | - | chr5_4:6261852-6261871 | Msa0833080:CDS | 60.0% | |
| TGCCGCCACCACCTGCAAAA+TGG | - | chr5_4:6261852-6261871 | Msa0833080:CDS | 60.0% | |
| CACACTGCTGCTGAGGCTGC+AGG | - | chr5_4:6261992-6262011 | Msa0833080:CDS | 65.0% | |
| CACACTGCTGCTGAGGCTGC+AGG | - | chr5_4:6261992-6262011 | Msa0833080:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 6261347 | 6262588 | 6261347 | ID=Msa0833080;Name=Msa0833080 |
| chr5_4 | mRNA | 6261347 | 6262588 | 6261347 | ID=Msa0833080-mRNA-1;Parent=Msa0833080;Name=Msa0833080-mRNA-1;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|413 |
| chr5_4 | exon | 6261347 | 6262588 | 6261347 | ID=Msa0833080-mRNA-1:exon:2690;Parent=Msa0833080-mRNA-1 |
| chr5_4 | CDS | 6261347 | 6262588 | 6261347 | ID=Msa0833080-mRNA-1:cds;Parent=Msa0833080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
