AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0829110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829110 MtrunA17_Chr3g0137391 95.614 570 25 0 1 570 1 570 0.0 1142
Msa0829110 MtrunA17_Chr1g0209571 60.516 504 184 6 73 563 13 514 0.0 614
Msa0829110 MtrunA17_Chr6g0479571 56.026 307 117 7 263 563 3 297 4.89e-113 340
Msa0829110 MtrunA17_Chr6g0479561 54.082 98 45 0 143 240 67 164 2.58e-28 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829110 AT2G31170.1 68.717 569 165 4 1 568 1 557 0.0 807
Msa0829110 AT2G31170.2 73.671 395 104 0 174 568 1 395 0.0 624
Msa0829110 AT2G31170.3 73.671 395 104 0 174 568 1 395 0.0 624
Msa0829110 AT5G38830.1 54.400 500 219 4 75 565 7 506 0.0 535
Msa0829110 AT3G56300.1 51.111 495 194 6 74 564 9 459 7.81e-166 481
Msa0829110 AT3G56300.2 48.861 395 158 5 174 564 1 355 2.44e-116 350
Msa0829110 AT3G56300.3 48.861 395 158 5 174 564 1 355 2.44e-116 350

Find 131 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTATAATTCACATCTTTA+AGG 0.165551 5_4:+2066506 None:intergenic
CAAAACCAGGGGAGCCATTT+TGG 0.166704 5_4:-2070532 Msa0829110:CDS
CTTGATAATTTCCCATATTC+TGG 0.176323 5_4:+2070794 None:intergenic
TGTTCTTGGTATTGCTCTTA+TGG 0.231140 5_4:-2066676 Msa0829110:CDS
TCTCAATCATATCAATGATT+TGG 0.233087 5_4:+2071105 None:intergenic
CTCAATCATATCAATGATTT+GGG 0.245172 5_4:+2071106 None:intergenic
TGTTTACAGATTCTTAATAA+TGG 0.250507 5_4:-2070866 Msa0829110:intron
TCAATTTCGATCTTCTTTAC+AGG 0.252651 5_4:-2072544 Msa0829110:intron
CCCTGGGGTCCTGGAAGACC+TGG 0.266331 5_4:-2070503 Msa0829110:CDS
AACAGCTAAATCTTTCCTTA+TGG 0.285722 5_4:+2066695 None:intergenic
AGGAAAGATTTAGCTGTTCT+TGG 0.291942 5_4:-2066690 Msa0829110:CDS
TTTCCTTATGGAATCGGATT+TGG 0.302688 5_4:+2066707 None:intergenic
ATTATGAATATTCTACAAAA+AGG 0.310424 5_4:+2066393 None:intergenic
CGGCGCGGTAAGCGGGGATA+AGG 0.327966 5_4:+2072822 None:intergenic
ATAATAATTTGTCATTTCAT+TGG 0.329280 5_4:+2066365 None:intergenic
GTTTACAGATTCTTAATAAT+GGG 0.331846 5_4:-2070865 Msa0829110:intron
CCCCAGGGACTCTCCCAAAA+TGG 0.341414 5_4:+2070518 None:intergenic
ACAGTCCTTCGCCGGAAGTA+TGG 0.374888 5_4:-2072691 Msa0829110:CDS
GCTTATGATCTTAGCCATAT+TGG 0.374910 5_4:-2072584 Msa0829110:CDS
GACATTCCGGCCAATGCAAC+TGG 0.376927 5_4:+2069726 None:intergenic
AGTGAAGATGTCTAAATCTC+TGG 0.377209 5_4:-2070300 Msa0829110:CDS
CTCTCCCAAAATGGCTCCCC+TGG 0.385059 5_4:+2070527 None:intergenic
ATATGCCACCCAGGTCTTCC+AGG 0.386835 5_4:+2070494 None:intergenic
TGGGAGAGTCCCTGGGGTCC+TGG 0.391356 5_4:-2070512 Msa0829110:CDS
TAAATCTTTCCTTATGGAAT+CGG 0.394076 5_4:+2066701 None:intergenic
ACAATTCTGGTACAAGGATA+TGG 0.394848 5_4:-2066545 Msa0829110:three_prime_UTR
AAAAGTGGAAGCGACAATTC+TGG 0.399125 5_4:-2066558 Msa0829110:three_prime_UTR
AGCGAGAAGCGTGGTGGAAA+AGG 0.411291 5_4:+2072859 None:intergenic
ATTGCCAGATCGAAGGAGTT+AGG 0.417633 5_4:-2071239 Msa0829110:CDS
GTGTTGTGCAGCCATACTTC+CGG 0.419506 5_4:+2072680 None:intergenic
AAGACGGCGGCGCGGTAAGC+GGG 0.420794 5_4:+2072815 None:intergenic
GGCCTCCAAGTTGTGCCATT+CGG 0.423069 5_4:+2066648 None:intergenic
CAGCTTTGAAGAAAAGCATC+GGG 0.434560 5_4:-2067684 Msa0829110:CDS
GGCATGTGCTCAGACACTTT+CGG 0.434775 5_4:+2071128 None:intergenic
AAACACGAGCATGACCAATA+TGG 0.437195 5_4:+2072570 None:intergenic
CTTGAAGAAGATCGAAGAAC+GGG 0.438056 5_4:-2066757 Msa0829110:CDS
CCCAGGTCTTCCAGGACCCC+AGG 0.440253 5_4:+2070502 None:intergenic
GTTTGAGAAGAGACAGGGTA+AGG 0.442011 5_4:+2072891 None:intergenic
TGTAGTGTTTGAGAAGAGAC+AGG 0.448125 5_4:+2072885 None:intergenic
ATCCTCCTCCCAGCCATTCA+CGG 0.452178 5_4:-2072756 Msa0829110:CDS
CATGCCTTCAAGTTATTATG+AGG 0.452332 5_4:-2067638 Msa0829110:intron
GCTATGAGTGCAGCCTATCT+TGG 0.457755 5_4:-2070461 Msa0829110:CDS
CGCCGTGAATGGCTGGGAGG+AGG 0.460193 5_4:+2072754 None:intergenic
CACGGTCTGAAGCACTTTCA+AGG 0.460688 5_4:+2070064 None:intergenic
CATACCTCATAATAACTTGA+AGG 0.464665 5_4:+2067634 None:intergenic
AGACATCTTCACTGAGTCAA+TGG 0.468631 5_4:+2070310 None:intergenic
AGCAGCATGATCAGACAGTT+AGG 0.469945 5_4:-2069836 Msa0829110:CDS
TTCACATCTTTAAGGCATCA+AGG 0.477076 5_4:+2066514 None:intergenic
CCTGGGGTCCTGGAAGACCT+GGG 0.477470 5_4:-2070502 Msa0829110:CDS
CCCAAAGTGGAAAAGAAAGT+TGG 0.480236 5_4:-2072629 Msa0829110:CDS
CACACTCCAGTTGCATTGGC+CGG 0.482073 5_4:-2069732 Msa0829110:CDS
GATGAGACGGCGCGAAATGA+AGG 0.482579 5_4:+2072776 None:intergenic
AGAGGGTTGCTGTTGATTCA+AGG 0.486196 5_4:-2070742 Msa0829110:CDS
TAGCGTCGACTCAAACTGAT+TGG 0.488623 5_4:+2071209 None:intergenic
GTCAAAAGAGTAACCAAGAT+AGG 0.493768 5_4:+2070448 None:intergenic
CTCAGACACTTTCGGTTCCA+CGG 0.496291 5_4:+2071136 None:intergenic
TTCTCCTAACTCCTTCGATC+TGG 0.496608 5_4:+2071235 None:intergenic
CATAGTCGCAAGACACCAAT+GGG 0.496975 5_4:-2072917 Msa0829110:exon
GGCGCGGTAAGCGGGGATAA+GGG 0.498615 5_4:+2072823 None:intergenic
ATGCCAAATCCGATTCCATA+AGG 0.501426 5_4:-2066710 Msa0829110:CDS
GGGTATGCGTACAATGTTGA+TGG 0.506714 5_4:-2070845 Msa0829110:CDS
GTGTATATTAGAGTAGTTCA+TGG 0.507618 5_4:+2070086 None:intergenic
TTTCTCCGCCGTGAATGGCT+GGG 0.510810 5_4:+2072748 None:intergenic
CCGTTCAAACAGTCCTTCGC+CGG 0.511745 5_4:-2072699 Msa0829110:CDS
TTCTTGAAGTTGAAGAGGAA+TGG 0.514129 5_4:+2066623 None:intergenic
GTCCGAATGGCACAACTTGG+AGG 0.515578 5_4:-2066650 Msa0829110:CDS
GGATACTGCTCGAATACAAA+AGG 0.516654 5_4:-2066736 Msa0829110:CDS
TGAAGTTGAAGAGGAATGGC+AGG 0.526649 5_4:+2066627 None:intergenic
AGTTGTTCTTGAAGTTGAAG+AGG 0.527353 5_4:+2066618 None:intergenic
TGTAGATGTTTACCATCCGT+TGG 0.528710 5_4:-2070148 Msa0829110:CDS
ATATTAAGATTTATTTGACT+CGG 0.530664 5_4:-2073005 None:intergenic
GCGAGAAGCGTGGTGGAAAA+GGG 0.530787 5_4:+2072860 None:intergenic
GTGAAGATGTCTAAATCTCT+GGG 0.535871 5_4:-2070299 Msa0829110:CDS
TTCCAAAGAGCAAAATCAGC+AGG 0.536604 5_4:+2070710 None:intergenic
TGCAGCCATACTTCCGGCGA+AGG 0.537454 5_4:+2072686 None:intergenic
ACTTTCGGTTCCACGGTAGC+AGG 0.539259 5_4:+2071143 None:intergenic
TAATTGTTTACCTGCTACCG+TGG 0.547650 5_4:-2071153 Msa0829110:CDS
ATAATACTCAAAGTATCTGA+TGG 0.549839 5_4:+2069801 None:intergenic
TCTTCACACTCCAGTTGCAT+TGG 0.552786 5_4:-2069736 Msa0829110:CDS
ATAGTCCGAATGGCACAACT+TGG 0.552969 5_4:-2066653 Msa0829110:CDS
GCAGCTTTGAAGAAAAGCAT+CGG 0.553637 5_4:-2067685 Msa0829110:CDS
TGGCTGGGAGGAGGATGAGA+CGG 0.555918 5_4:+2072763 None:intergenic
TGTATATTAGAGTAGTTCAT+GGG 0.559081 5_4:+2070087 None:intergenic
GCATGATCAGACAGTTAGGA+AGG 0.563775 5_4:-2069832 Msa0829110:CDS
GTAAAAGTGATATTAGTGTA+TGG 0.567475 5_4:-2070352 Msa0829110:CDS
ATTCTGCAGTCTACAAAACC+AGG 0.570306 5_4:-2070545 Msa0829110:intron
ACATAGTCGCAAGACACCAA+TGG 0.570777 5_4:-2072918 Msa0829110:exon
TCTTGAAGAAGATCGAAGAA+CGG 0.570790 5_4:-2066758 Msa0829110:CDS
GAAGACGGCGGCGCGGTAAG+CGG 0.572515 5_4:+2072814 None:intergenic
GCATGAGACCTAAAACAGTA+AGG 0.575572 5_4:+2067656 None:intergenic
CCAGGTCTTCCAGGACCCCA+GGG 0.580897 5_4:+2070503 None:intergenic
GGGGTCCTGGAAGACCTGGG+TGG 0.581557 5_4:-2070499 Msa0829110:CDS
AAAGTTGGAATGTATGTTTG+TGG 0.583676 5_4:-2072614 Msa0829110:CDS
TTTCATGGTGAGGAAATACA+AGG 0.585478 5_4:+2070405 None:intergenic
ACTCAAAGTATCTGATGGGA+CGG 0.591284 5_4:+2069806 None:intergenic
AAGATAATCGAGCTGGTGAG+AGG 0.592510 5_4:-2070760 Msa0829110:CDS
TAATACTCAAAGTATCTGAT+GGG 0.595853 5_4:+2069802 None:intergenic
CGACTTGCTGCATACTCGCA+AGG 0.595875 5_4:-2069682 Msa0829110:intron
CCGGCGAAGGACTGTTTGAA+CGG 0.597954 5_4:+2072699 None:intergenic
TTTGAGAAGAGACAGGGTAA+GGG 0.601002 5_4:+2072892 None:intergenic
GGTCTAGAAGATAATCGAGC+TGG 0.605311 5_4:-2070767 Msa0829110:CDS
TATCGACATGTGAGTGAACA+CGG 0.605447 5_4:+2072971 None:intergenic
AATCATTGATATGATTGAGA+AGG 0.605611 5_4:-2071102 Msa0829110:intron
GCTCTTATGGATAGTCCGAA+TGG 0.605818 5_4:-2066663 Msa0829110:CDS
AATATCTCAAAGCCAACGGA+TGG 0.606438 5_4:+2070136 None:intergenic
TAAGCGGGGATAAGGGTTCG+AGG 0.608060 5_4:+2072830 None:intergenic
AGATAATCGAGCTGGTGAGA+GGG 0.611949 5_4:-2070759 Msa0829110:CDS
CATAACAAACTTCAAATCCC+AGG 0.614122 5_4:+2072417 None:intergenic
GGTATGCGTACAATGTTGAT+GGG 0.615200 5_4:-2070844 Msa0829110:CDS
GTAGATAATTGCCAGATCGA+AGG 0.619483 5_4:-2071246 Msa0829110:intron
AGACGGCGGCGCGGTAAGCG+GGG 0.628758 5_4:+2072816 None:intergenic
CTGCATTCAATATGCCACCC+AGG 0.633143 5_4:+2070485 None:intergenic
TCAATTCAATAATGACCACC+AGG 0.634867 5_4:+2066438 None:intergenic
AGACGGCGCGAAATGAAGGA+AGG 0.638002 5_4:+2072780 None:intergenic
TCAATCATATCAATGATTTG+GGG 0.639781 5_4:+2071107 None:intergenic
TATGGGAAATTATCAAGTCG+AGG 0.642250 5_4:-2070788 Msa0829110:CDS
GACAGGGTAAGGGTACCCAT+TGG 0.643141 5_4:+2072902 None:intergenic
CTCCGCCGTGAATGGCTGGG+AGG 0.650126 5_4:+2072751 None:intergenic
GAAGCGACAATTCTGGTACA+AGG 0.657134 5_4:-2066551 Msa0829110:three_prime_UTR
GTAGTGTTTGAGAAGAGACA+GGG 0.658469 5_4:+2072886 None:intergenic
TTCTGCAGTCTACAAAACCA+GGG 0.665487 5_4:-2070544 Msa0829110:intron
TGAGTGAGCGAGAAGCGTGG+TGG 0.677483 5_4:+2072853 None:intergenic
ATCGACATGTGAGTGAACAC+GGG 0.694052 5_4:+2072972 None:intergenic
AGGTGAGTGAGCGAGAAGCG+TGG 0.702129 5_4:+2072850 None:intergenic
CTCCTCCCAGCCATTCACGG+CGG 0.706114 5_4:-2072753 Msa0829110:CDS
GTGAAGATCATCAGACATCG+AGG 0.721359 5_4:+2069752 None:intergenic
TCTGCAGTCTACAAAACCAG+GGG 0.721470 5_4:-2070543 Msa0829110:intron
CAAGGTCAATCCCTCCACCG+TGG 0.727954 5_4:+2070423 None:intergenic
ATTAGTGTATGGATGCACAA+TGG 0.730610 5_4:-2070341 Msa0829110:CDS
AGCTTTGAAGAAAAGCATCG+GGG 0.755856 5_4:-2067683 Msa0829110:CDS
GTATGCGTACAATGTTGATG+GGG 0.762396 5_4:-2070843 Msa0829110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAATTACGAAATAT+GGG + chr5_4:2067783-2067802 None:intergenic 10.0%
!!! ATATTTCGTAATTATTTTTT+GGG - chr5_4:2067783-2067802 Msa0829110:intron 10.0%
!!! TAAGATTTTAAAAAAAGTTT+GGG + chr5_4:2070573-2070592 None:intergenic 10.0%
!!! AAAATTTTCAATTTACATTT+AGG - chr5_4:2070746-2070765 Msa0829110:CDS 10.0%
!! GAGTAATAATATATTAAAAT+AGG - chr5_4:2071845-2071864 Msa0829110:intron 10.0%
!! AATAATATATTAAAATAGGT+TGG - chr5_4:2071849-2071868 Msa0829110:intron 10.0%
!! AAAGATAAAATAATGTCAAA+AGG + chr5_4:2067293-2067312 None:intergenic 15.0%
!!! AAAACTAAGCAATTTTTTTT+AGG - chr5_4:2067725-2067744 Msa0829110:intron 15.0%
!!! AAACTAAGCAATTTTTTTTA+GGG - chr5_4:2067726-2067745 Msa0829110:intron 15.0%
!! CAAAAAATAATTACGAAATA+TGG + chr5_4:2067784-2067803 None:intergenic 15.0%
!!! CATATTTCGTAATTATTTTT+TGG - chr5_4:2067782-2067801 Msa0829110:intron 15.0%
!!! TATTTCGTAATTATTTTTTG+GGG - chr5_4:2067784-2067803 Msa0829110:intron 15.0%
!!! TAAGTTTAAAATTTATAACG+AGG + chr5_4:2068716-2068735 None:intergenic 15.0%
!!! GTAAGATTTTAAAAAAAGTT+TGG + chr5_4:2070574-2070593 None:intergenic 15.0%
!!! TTCATAGACATTATATATTT+TGG - chr5_4:2070651-2070670 Msa0829110:intron 15.0%
!!! CTTTGTGAAATTTTTTTTTA+TGG - chr5_4:2070685-2070704 Msa0829110:intron 15.0%
!! CATAATAGAAAATCAAAATT+TGG + chr5_4:2070896-2070915 None:intergenic 15.0%
!! AAAAAAAACAGTATCAATAA+AGG + chr5_4:2071115-2071134 None:intergenic 15.0%
!! TTCCAATTTGATTATAATTA+AGG + chr5_4:2071235-2071254 None:intergenic 15.0%
!! AATAGAAATTTGGAAAAATT+GGG + chr5_4:2071987-2072006 None:intergenic 15.0%
!! AAATAGAAATTTGGAAAAAT+TGG + chr5_4:2071988-2072007 None:intergenic 15.0%
!! ATTTCATATTATACAAGATA+AGG + chr5_4:2072490-2072509 None:intergenic 15.0%
!! AATTATAATTCACATCTTTA+AGG + chr5_4:2072843-2072862 None:intergenic 15.0%
!! ATTATGAATATTCTACAAAA+AGG + chr5_4:2072956-2072975 None:intergenic 15.0%
!!! ATAATAATTTGTCATTTCAT+TGG + chr5_4:2072984-2073003 None:intergenic 15.0%
!!! GATTTTTTTTTGGTACTAAT+TGG - chr5_4:2066872-2066891 Msa0829110:intron 20.0%
!!! CATATGTTGTTATTATCATA+AGG + chr5_4:2067185-2067204 None:intergenic 20.0%
!! TCATAAACTATAATAGCTTA+TGG + chr5_4:2067244-2067263 None:intergenic 20.0%
!!! AATTTTCAAAATGCAAGTTT+TGG - chr5_4:2067542-2067561 Msa0829110:intron 20.0%
!! ATACATCATTAACTTATACA+GGG + chr5_4:2067849-2067868 None:intergenic 20.0%
!! CAAAATATGATTAAAAGAAC+GGG + chr5_4:2067962-2067981 None:intergenic 20.0%
!! CCAAAATATGATTAAAAGAA+CGG + chr5_4:2067963-2067982 None:intergenic 20.0%
!!! TTTAATCATATTTTGGAGTT+TGG - chr5_4:2067967-2067986 Msa0829110:intron 20.0%
!! AAAACTCTCAAAAATTCTTA+CGG + chr5_4:2067994-2068013 None:intergenic 20.0%
!! TGTTTACAGATTCTTAATAA+TGG - chr5_4:2068480-2068499 Msa0829110:intron 20.0%
!! GTTTACAGATTCTTAATAAT+GGG - chr5_4:2068481-2068500 Msa0829110:intron 20.0%
!! TAGAAAAATTTCCAGAATAT+GGG - chr5_4:2068541-2068560 Msa0829110:intron 20.0%
!!! ATAACTTCTATGATGTTTTT+CGG - chr5_4:2069570-2069589 Msa0829110:intron 20.0%
!!! AGTCGTTAATTAATTTTAGT+GGG + chr5_4:2069649-2069668 None:intergenic 20.0%
!!! AAGTCGTTAATTAATTTTAG+TGG + chr5_4:2069650-2069669 None:intergenic 20.0%
!! AATTATAAGAGAGAAAATTG+TGG - chr5_4:2069856-2069875 Msa0829110:CDS 20.0%
!! TTGTTACATGATAGTAAATA+TGG - chr5_4:2070074-2070093 Msa0829110:CDS 20.0%
!! AAATTTCACAAAGTTTGAAA+GGG + chr5_4:2070678-2070697 None:intergenic 20.0%
!! AAAATTTCACAAAGTTTGAA+AGG + chr5_4:2070679-2070698 None:intergenic 20.0%
!!! TTTTTGATTGATTTTGAATG+AGG - chr5_4:2070785-2070804 Msa0829110:CDS 20.0%
!! GAACAAAAAACTATCAATAA+AGG + chr5_4:2071051-2071070 None:intergenic 20.0%
!! GTCCTTAATTATAATCAAAT+TGG - chr5_4:2071230-2071249 Msa0829110:CDS 20.0%
!! TAAAGTAAATTTCAAAAAGC+AGG - chr5_4:2071902-2071921 Msa0829110:intron 20.0%
!! AAAGTAAATTTCAAAAAGCA+GGG - chr5_4:2071903-2071922 Msa0829110:intron 20.0%
!! ATAGAAATTTGGAAAAATTG+GGG + chr5_4:2071986-2072005 None:intergenic 20.0%
!!! TACATATCTTTTAAATCCTA+AGG + chr5_4:2072171-2072190 None:intergenic 20.0%
!! TAGGATTTAAAAGATATGTA+CGG - chr5_4:2072171-2072190 Msa0829110:intron 20.0%
!!! ATTATACAAGATAAGGTATT+AGG + chr5_4:2072483-2072502 None:intergenic 20.0%
!! ATAAAAAAAAAATTGTCACG+AGG - chr5_4:2072872-2072891 Msa0829110:CDS 20.0%
!!! ATTATTCTTTTAAACCTTTG+TGG - chr5_4:2072930-2072949 Msa0829110:five_prime_UTR 20.0%
!!! GACTATGTTTTTTTGTGTTT+TGG + chr5_4:2066416-2066435 None:intergenic 25.0%
!!! TCATTTTTTTTTCCCCTTTA+AGG + chr5_4:2066854-2066873 None:intergenic 25.0%
!!! TTGGTTTTTGTTTGACAATT+AGG - chr5_4:2066891-2066910 Msa0829110:intron 25.0%
!!! CTTTGTGGTCTTATATAAAT+TGG - chr5_4:2067052-2067071 Msa0829110:intron 25.0%
! TATATAAATTGGCATCATTG+AGG - chr5_4:2067063-2067082 Msa0829110:intron 25.0%
! TTATACAAGCTATACTACTA+AGG + chr5_4:2067095-2067114 None:intergenic 25.0%
!! TTAGTAGTATAGCTTGTATA+AGG - chr5_4:2067094-2067113 Msa0829110:intron 25.0%
! AAAGAAGTTATCGAAAATAG+AGG + chr5_4:2067438-2067457 None:intergenic 25.0%
!!! TCGATAACTTCTTTTAACTA+TGG - chr5_4:2067444-2067463 Msa0829110:intron 25.0%
!!! CTTTTAACTATGGTTTGATT+AGG - chr5_4:2067454-2067473 Msa0829110:intron 25.0%
! AATAGATTGTGTTTCAACAA+GGG + chr5_4:2067490-2067509 None:intergenic 25.0%
! TAATAGATTGTGTTTCAACA+AGG + chr5_4:2067491-2067510 None:intergenic 25.0%
! TTCAACTGTGTTACAATTAA+TGG + chr5_4:2067514-2067533 None:intergenic 25.0%
!!! TAGAGAGAAAAAGGTTTTAA+GGG - chr5_4:2067590-2067609 Msa0829110:intron 25.0%
! GATACATCATTAACTTATAC+AGG + chr5_4:2067850-2067869 None:intergenic 25.0%
!! CCGTTCTTTTAATCATATTT+TGG - chr5_4:2067960-2067979 Msa0829110:intron 25.0%
! TACTTTGAACTTGCAATAAA+AGG + chr5_4:2068025-2068044 None:intergenic 25.0%
! TCAATCATATCAATGATTTG+GGG + chr5_4:2068242-2068261 None:intergenic 25.0%
! CTCAATCATATCAATGATTT+GGG + chr5_4:2068243-2068262 None:intergenic 25.0%
! TCTCAATCATATCAATGATT+TGG + chr5_4:2068244-2068263 None:intergenic 25.0%
! AATCATTGATATGATTGAGA+AGG - chr5_4:2068244-2068263 Msa0829110:intron 25.0%
! CATAATAAAATGAACGACAA+TGG + chr5_4:2068272-2068291 None:intergenic 25.0%
!! CATTGTCGTTCATTTTATTA+TGG - chr5_4:2068270-2068289 Msa0829110:intron 25.0%
! GTAGAAAAATTTCCAGAATA+TGG - chr5_4:2068540-2068559 Msa0829110:intron 25.0%
! GTAAAAGTGATATTAGTGTA+TGG - chr5_4:2068994-2069013 Msa0829110:intron 25.0%
! ACAAATTAAGTCTAAACCAT+CGG + chr5_4:2069106-2069125 None:intergenic 25.0%
! ATTGTTTAGTATCATTCACA+AGG - chr5_4:2069134-2069153 Msa0829110:intron 25.0%
! AACATGAAATATTTGTGGAA+TGG + chr5_4:2069171-2069190 None:intergenic 25.0%
! ATTCCACAAATATTTCATGT+TGG - chr5_4:2069170-2069189 Msa0829110:intron 25.0%
! AAAAAATATCTCAAAGCCAA+CGG + chr5_4:2069217-2069236 None:intergenic 25.0%
! TGTATATTAGAGTAGTTCAT+GGG + chr5_4:2069262-2069281 None:intergenic 25.0%
! CCTCGTATATATAAAAAACA+CGG + chr5_4:2069303-2069322 None:intergenic 25.0%
!! TAATACTCAAAGTATCTGAT+GGG + chr5_4:2069547-2069566 None:intergenic 25.0%
!! ATAATACTCAAAGTATCTGA+TGG + chr5_4:2069548-2069567 None:intergenic 25.0%
!!! TAGGTTTTAAATCCATTAAG+AGG - chr5_4:2070021-2070040 Msa0829110:intron 25.0%
! TGAAATTCTCTACAATATCA+AGG + chr5_4:2070145-2070164 None:intergenic 25.0%
! TGTGGCAAAAAAATATCTAA+CGG - chr5_4:2070266-2070285 Msa0829110:intron 25.0%
! TGTGGCAAAAAAATATCTAA+CGG + chr5_4:2070266-2070285 None:intergenic 25.0%
! AATTTCACAAAGTTTGAAAG+GGG + chr5_4:2070677-2070696 None:intergenic 25.0%
!! TTTGAAAATGGATCATTTTC+AGG - chr5_4:2070814-2070833 Msa0829110:CDS 25.0%
! CAAAAAACTATCAATAAAGG+TGG + chr5_4:2071048-2071067 None:intergenic 25.0%
! TTAGCAAAGGTTAAAGTAAA+GGG - chr5_4:2071414-2071433 Msa0829110:intron 25.0%
!!! TTAAAGTAAAGGGTATTTTG+TGG - chr5_4:2071424-2071443 Msa0829110:intron 25.0%
! ATCAACACAAATATTTCACA+TGG - chr5_4:2071566-2071585 Msa0829110:intron 25.0%
!!! TTTTTTCCCTGTAAAGATTA+TGG + chr5_4:2071616-2071635 None:intergenic 25.0%
! AAGTAAATTTCAAAAAGCAG+GGG - chr5_4:2071904-2071923 Msa0829110:intron 25.0%
! TAGAAATTTGGAAAAATTGG+GGG + chr5_4:2071985-2072004 None:intergenic 25.0%
! GCAAGAGTTAAATAGAAATT+TGG + chr5_4:2071997-2072016 None:intergenic 25.0%
! AATCTTGATGTTAAATCCAA+TGG + chr5_4:2072080-2072099 None:intergenic 25.0%
! TAAATCTTTCCTTATGGAAT+CGG + chr5_4:2072648-2072667 None:intergenic 25.0%
! TGCAAAGCAAAATAAAAAAG+TGG - chr5_4:2072773-2072792 Msa0829110:CDS 25.0%
!!! AAGGTTGTTTTTTCTGAAGA+CGG + chr5_4:2066550-2066569 None:intergenic 30.0%
AAAGTTGGAATGTATGTTTG+TGG - chr5_4:2066732-2066751 Msa0829110:CDS 30.0%
TCAATTTCGATCTTCTTTAC+AGG - chr5_4:2066802-2066821 Msa0829110:CDS 30.0%
TCTTCAAGAACTTACCTTAA+AGG - chr5_4:2066837-2066856 Msa0829110:intron 30.0%
CTTCAAGAACTTACCTTAAA+GGG - chr5_4:2066838-2066857 Msa0829110:intron 30.0%
TTCAAGAACTTACCTTAAAG+GGG - chr5_4:2066839-2066858 Msa0829110:intron 30.0%
! TTTTACAGATGTAGATGACA+AGG - chr5_4:2066959-2066978 Msa0829110:intron 30.0%
!!! ACTTATTTTAGCTTTTCCGT+TGG - chr5_4:2067130-2067149 Msa0829110:intron 30.0%
ATAAGCTTGAAAACTGCTTA+TGG + chr5_4:2067219-2067238 None:intergenic 30.0%
TAATCAGCTGTTTATCCAAT+AGG - chr5_4:2067379-2067398 Msa0829110:intron 30.0%
AATCAGCTGTTTATCCAATA+GGG - chr5_4:2067380-2067399 Msa0829110:intron 30.0%
! GTAGAGAGAAAAAGGTTTTA+AGG - chr5_4:2067589-2067608 Msa0829110:intron 30.0%
!! TTTTCTTTTAGGGGTCTATT+AGG + chr5_4:2067752-2067771 None:intergenic 30.0%
AGACCCCTAAAAGAAAAATT+TGG - chr5_4:2067755-2067774 Msa0829110:intron 30.0%
GACCCCTAAAAGAAAAATTT+GGG - chr5_4:2067756-2067775 Msa0829110:intron 30.0%
ACCCCTAAAAGAAAAATTTG+GGG - chr5_4:2067757-2067776 Msa0829110:intron 30.0%
!!! TAATTATTTTTTGGGGCCTA+GGG - chr5_4:2067791-2067810 Msa0829110:intron 30.0%
TCATAGGATAACAAACTGAA+TGG + chr5_4:2067939-2067958 None:intergenic 30.0%
ACAGGCAATTAAAAAGTAGT+GGG + chr5_4:2068048-2068067 None:intergenic 30.0%
AACAGGCAATTAAAAAGTAG+TGG + chr5_4:2068049-2068068 None:intergenic 30.0%
!! ACTTTTTAATTGCCTGTTAC+AGG - chr5_4:2068051-2068070 Msa0829110:intron 30.0%
GTACTCTTAGAAATGGAATA+TGG + chr5_4:2068341-2068360 None:intergenic 30.0%
CATGTAAGTACTCTTAGAAA+TGG + chr5_4:2068348-2068367 None:intergenic 30.0%
!! CATTTCTAAGAGTACTTACA+TGG - chr5_4:2068346-2068365 Msa0829110:intron 30.0%
TACTTACATGGATATGCTAT+TGG - chr5_4:2068358-2068377 Msa0829110:intron 30.0%
! CTATTATCAAGCTCTCTTTT+AGG - chr5_4:2068406-2068425 Msa0829110:intron 30.0%
! CTTGATAATTTCCCATATTC+TGG + chr5_4:2068555-2068574 None:intergenic 30.0%
! CTTTGGAAGGTATAAGATAT+TGG - chr5_4:2068651-2068670 Msa0829110:intron 30.0%
CAGAATATCATTGAAAATCC+AGG + chr5_4:2068787-2068806 None:intergenic 30.0%
! TCTGAGCAATTTCATTTTCA+TGG + chr5_4:2068959-2068978 None:intergenic 30.0%
AAATTAAGTCTAAACCATCG+GGG + chr5_4:2069104-2069123 None:intergenic 30.0%
CAAATTAAGTCTAAACCATC+GGG + chr5_4:2069105-2069124 None:intergenic 30.0%
GTGTATATTAGAGTAGTTCA+TGG + chr5_4:2069263-2069282 None:intergenic 30.0%
!!! CCGTGTTTTTTATATATACG+AGG - chr5_4:2069300-2069319 Msa0829110:intron 30.0%
!!! TTGGCAAGCATAATTTTTTC+AGG - chr5_4:2069383-2069402 Msa0829110:intron 30.0%
! TTTTCATATCTTCACACATC+AGG + chr5_4:2069700-2069719 None:intergenic 30.0%
AAGTGATAAACTAACTGTCA+TGG - chr5_4:2069775-2069794 Msa0829110:CDS 30.0%
ACATGTGTGGAGAAAATTTA+TGG - chr5_4:2069935-2069954 Msa0829110:intron 30.0%
CATGTGTGGAGAAAATTTAT+GGG - chr5_4:2069936-2069955 Msa0829110:intron 30.0%
TCAAATGGAGAATAGTACAA+TGG - chr5_4:2069968-2069987 Msa0829110:intron 30.0%
TACTACTAAGTTCCTCTTAA+TGG + chr5_4:2070036-2070055 None:intergenic 30.0%
TAAATAGAGCTTAGCCTAAA+TGG - chr5_4:2070466-2070485 Msa0829110:CDS 30.0%
! AAAGTTTGGGACAACAATTT+GGG + chr5_4:2070560-2070579 None:intergenic 30.0%
! AAAAGTTTGGGACAACAATT+TGG + chr5_4:2070561-2070580 None:intergenic 30.0%
! TTTTACCAATCCACTAGATT+GGG + chr5_4:2070607-2070626 None:intergenic 30.0%
ATGAGGTCAAAGTTTGAAAA+TGG - chr5_4:2070802-2070821 Msa0829110:CDS 30.0%
!!! AGGGTTTTAGATAAAAAGTG+AGG - chr5_4:2070953-2070972 Msa0829110:intron 30.0%
!!! GGGTTTTAGATAAAAAGTGA+GGG - chr5_4:2070954-2070973 Msa0829110:intron 30.0%
ACTTTAACCTTTGCTAAGAT+TGG + chr5_4:2071411-2071430 None:intergenic 30.0%
CTTAGCAAAGGTTAAAGTAA+AGG - chr5_4:2071413-2071432 Msa0829110:intron 30.0%
ACTTCAAAACTGTTATCTTG+TGG - chr5_4:2071513-2071532 Msa0829110:intron 30.0%
TCTAAGTCCATAATCTTTAC+AGG - chr5_4:2071606-2071625 Msa0829110:intron 30.0%
CTAAGTCCATAATCTTTACA+GGG - chr5_4:2071607-2071626 Msa0829110:intron 30.0%
CATACCTCATAATAACTTGA+AGG + chr5_4:2071715-2071734 None:intergenic 30.0%
!! TTAAAATAGGTTGGTGCTTA+CGG - chr5_4:2071858-2071877 Msa0829110:intron 30.0%
AGAAATTTGGAAAAATTGGG+GGG + chr5_4:2071984-2072003 None:intergenic 30.0%
ATTGGATGTCAATGTAAAAC+AGG + chr5_4:2072207-2072226 None:intergenic 30.0%
!!! GCAAAATAGTGGATTTTCAT+TGG + chr5_4:2072225-2072244 None:intergenic 30.0%
ACCAATTCTTTACGAAAATG+GGG + chr5_4:2072255-2072274 None:intergenic 30.0%
CACCAATTCTTTACGAAAAT+GGG + chr5_4:2072256-2072275 None:intergenic 30.0%
AATGCTAATATGCAAAGTTG+TGG - chr5_4:2072356-2072375 Msa0829110:intron 30.0%
ATGCTAATATGCAAAGTTGT+GGG - chr5_4:2072357-2072376 Msa0829110:intron 30.0%
AAATGTGTTGTCATGTAGAT+AGG - chr5_4:2072400-2072419 Msa0829110:CDS 30.0%
AACAGCTAAATCTTTCCTTA+TGG + chr5_4:2072654-2072673 None:intergenic 30.0%
!! AGAGATTTTTAAGCCCAAAG+TGG - chr5_4:2066704-2066723 Msa0829110:CDS 35.0%
! CCAACTTTCTTTTCCACTTT+GGG + chr5_4:2066720-2066739 None:intergenic 35.0%
! TCCAACTTTCTTTTCCACTT+TGG + chr5_4:2066721-2066740 None:intergenic 35.0%
GCTTATGATCTTAGCCATAT+TGG - chr5_4:2066762-2066781 Msa0829110:CDS 35.0%
CATAACAAACTTCAAATCCC+AGG + chr5_4:2066932-2066951 None:intergenic 35.0%
!! GCTTTCTAAAATCGAAGTTG+TGG + chr5_4:2067019-2067038 None:intergenic 35.0%
!! GCTATGTTGATGATTCTTTG+TGG - chr5_4:2067037-2067056 Msa0829110:intron 35.0%
TAAGCACATGTGAGACTATT+TGG - chr5_4:2067155-2067174 Msa0829110:intron 35.0%
AAGCACATGTGAGACTATTT+GGG - chr5_4:2067156-2067175 Msa0829110:intron 35.0%
! ATGTTTTACCAAGACCCTAT+TGG + chr5_4:2067397-2067416 None:intergenic 35.0%
! GCCCCAAATTTTTCTTTTAG+GGG + chr5_4:2067761-2067780 None:intergenic 35.0%
! GGCCCCAAATTTTTCTTTTA+GGG + chr5_4:2067762-2067781 None:intergenic 35.0%
!!! GTAATTATTTTTTGGGGCCT+AGG - chr5_4:2067790-2067809 Msa0829110:intron 35.0%
AACTGAATGGTCAATAGACA+GGG + chr5_4:2067926-2067945 None:intergenic 35.0%
AAACTGAATGGTCAATAGAC+AGG + chr5_4:2067927-2067946 None:intergenic 35.0%
TGATTAAAAGAACGGGTCAT+AGG + chr5_4:2067955-2067974 None:intergenic 35.0%
!! TGAAGAGTTTTGTCAAGACA+TGG - chr5_4:2068163-2068182 Msa0829110:intron 35.0%
TATGGGAAATTATCAAGTCG+AGG - chr5_4:2068558-2068577 Msa0829110:intron 35.0%
! TGGAAGGTATAAGATATTGG+TGG - chr5_4:2068654-2068673 Msa0829110:intron 35.0%
! AGTTTGAAGCTTATCTATCC+TGG - chr5_4:2068766-2068785 Msa0829110:intron 35.0%
GTCAAAAGAGTAACCAAGAT+AGG + chr5_4:2068901-2068920 None:intergenic 35.0%
TTTCATGGTGAGGAAATACA+AGG + chr5_4:2068944-2068963 None:intergenic 35.0%
! GCAATTTCATTTTCATGGTG+AGG + chr5_4:2068954-2068973 None:intergenic 35.0%
ATTAGTGTATGGATGCACAA+TGG - chr5_4:2069005-2069024 Msa0829110:intron 35.0%
AGTGAAGATGTCTAAATCTC+TGG - chr5_4:2069046-2069065 Msa0829110:intron 35.0%
GTGAAGATGTCTAAATCTCT+GGG - chr5_4:2069047-2069066 Msa0829110:intron 35.0%
!!! TGGGAAACTTTTTCACGATA+CGG - chr5_4:2069066-2069085 Msa0829110:intron 35.0%
CTGCCAACATGAAATATTTG+TGG + chr5_4:2069176-2069195 None:intergenic 35.0%
CACAAATATTTCATGTTGGC+AGG - chr5_4:2069174-2069193 Msa0829110:intron 35.0%
AATTATGCTTGCCAATTGCA+TGG + chr5_4:2069378-2069397 None:intergenic 35.0%
TGGAAATGAGAATGTTGAAG+TGG - chr5_4:2069795-2069814 Msa0829110:CDS 35.0%
AGAATGTTGAAGTGGATAAG+TGG - chr5_4:2069803-2069822 Msa0829110:CDS 35.0%
ACATGAAAGAATCTCGTCTT+AGG - chr5_4:2069897-2069916 Msa0829110:intron 35.0%
TGTGGAGAAAATTTATGGGA+GGG - chr5_4:2069940-2069959 Msa0829110:intron 35.0%
GAGAATAGTACAATGGTTAG+AGG - chr5_4:2069975-2069994 Msa0829110:intron 35.0%
GGGAGATCAAGAAAAGTTAT+AGG - chr5_4:2070002-2070021 Msa0829110:intron 35.0%
!! ATGGTGTTGTCTAATCCATA+CGG - chr5_4:2070093-2070112 Msa0829110:CDS 35.0%
AAGCTCCATTTACTCCATTT+AGG - chr5_4:2070227-2070246 Msa0829110:intron 35.0%
AGCTCCATTTACTCCATTTA+GGG - chr5_4:2070228-2070247 Msa0829110:intron 35.0%
CAAACCCTAAATGGAGTAAA+TGG + chr5_4:2070235-2070254 None:intergenic 35.0%
! CATTTACTCCATTTAGGGTT+TGG - chr5_4:2070233-2070252 Msa0829110:intron 35.0%
TGTTGTGATATGAGAGAAGA+AGG - chr5_4:2070321-2070340 Msa0829110:CDS 35.0%
GTTGTGATATGAGAGAAGAA+GGG - chr5_4:2070322-2070341 Msa0829110:CDS 35.0%
TATTTACTCCATTCAGGGTT+TGG + chr5_4:2070452-2070471 None:intergenic 35.0%
AGCTCTATTTACTCCATTCA+GGG + chr5_4:2070457-2070476 None:intergenic 35.0%
AAGCTCTATTTACTCCATTC+AGG + chr5_4:2070458-2070477 None:intergenic 35.0%
CGGAAAGATAAAAACCTTGA+CGG - chr5_4:2070521-2070540 Msa0829110:CDS 35.0%
! GTTTTACCAATCCACTAGAT+TGG + chr5_4:2070608-2070627 None:intergenic 35.0%
! ATGTTTTGTGTGCAATGATG+TGG - chr5_4:2070845-2070864 Msa0829110:CDS 35.0%
! TGTTTTGTGTGCAATGATGT+GGG - chr5_4:2070846-2070865 Msa0829110:CDS 35.0%
TTGGTTCACGTTGAACTATA+GGG - chr5_4:2070934-2070953 Msa0829110:intron 35.0%
!! AGGGCTTTGAATTGTGATTA+TGG - chr5_4:2070991-2071010 Msa0829110:intron 35.0%
! TTTTGTATCATTTCACTGCG+AGG + chr5_4:2071081-2071100 None:intergenic 35.0%
!!! TTTTTTGTTCTAGAGAGCCT+AGG - chr5_4:2071061-2071080 Msa0829110:intron 35.0%
GGACATTGTTTGATATGCTA+GGG + chr5_4:2071214-2071233 None:intergenic 35.0%
AGGACATTGTTTGATATGCT+AGG + chr5_4:2071215-2071234 None:intergenic 35.0%
CTTTGCTAAGATTGGATCAT+TGG + chr5_4:2071403-2071422 None:intergenic 35.0%
CAATGATCCAATCTTAGCAA+AGG - chr5_4:2071401-2071420 Msa0829110:intron 35.0%
ACTACATTAGAGACTTCCAA+TGG - chr5_4:2071480-2071499 Msa0829110:intron 35.0%
TGAAGTTACACTTCTACCAT+TGG + chr5_4:2071499-2071518 None:intergenic 35.0%
! CATGCCTTCAAGTTATTATG+AGG - chr5_4:2071708-2071727 Msa0829110:intron 35.0%
TAAATTTCAAAAAGCAGGGG+TGG - chr5_4:2071907-2071926 Msa0829110:intron 35.0%
AAATTTCAAAAAGCAGGGGT+GGG - chr5_4:2071908-2071927 Msa0829110:intron 35.0%
CGTTTAAATGGAGGTTTGTA+TGG - chr5_4:2072023-2072042 Msa0829110:intron 35.0%
!! GTTTGTATGGCGTTATTTTG+TGG - chr5_4:2072036-2072055 Msa0829110:intron 35.0%
CCAATGGTTAATAATGCAGA+GGG + chr5_4:2072064-2072083 None:intergenic 35.0%
TCCAATGGTTAATAATGCAG+AGG + chr5_4:2072065-2072084 None:intergenic 35.0%
GCGGCAATAATATCAAATGT+GGG + chr5_4:2072106-2072125 None:intergenic 35.0%
! TCTGAAGTTACTTCAACACA+AGG - chr5_4:2072130-2072149 Msa0829110:intron 35.0%
CTGAAGTTACTTCAACACAA+GGG - chr5_4:2072131-2072150 Msa0829110:intron 35.0%
GGTGACATAATATTCTCCTT+AGG - chr5_4:2072152-2072171 Msa0829110:intron 35.0%
! ACCCCATTTTCGTAAAGAAT+TGG - chr5_4:2072251-2072270 Msa0829110:intron 35.0%
CCACCAATTCTTTACGAAAA+TGG + chr5_4:2072257-2072276 None:intergenic 35.0%
! CCATTTTCGTAAAGAATTGG+TGG - chr5_4:2072254-2072273 Msa0829110:intron 35.0%
CAAAGTTGTGGGATAGTATA+TGG - chr5_4:2072368-2072387 Msa0829110:intron 35.0%
CATGACAACACATTTCTGTA+TGG + chr5_4:2072395-2072414 None:intergenic 35.0%
ATCTAATCAATGTCATGCAC+AGG - chr5_4:2072508-2072527 Msa0829110:intron 35.0%
TCTTGAAGAAGATCGAAGAA+CGG - chr5_4:2072588-2072607 Msa0829110:CDS 35.0%
TTTCCTTATGGAATCGGATT+TGG + chr5_4:2072642-2072661 None:intergenic 35.0%
AGGAAAGATTTAGCTGTTCT+TGG - chr5_4:2072656-2072675 Msa0829110:CDS 35.0%
TGTTCTTGGTATTGCTCTTA+TGG - chr5_4:2072670-2072689 Msa0829110:CDS 35.0%
TTCTTGAAGTTGAAGAGGAA+TGG + chr5_4:2072726-2072745 None:intergenic 35.0%
AGTTGTTCTTGAAGTTGAAG+AGG + chr5_4:2072731-2072750 None:intergenic 35.0%
ACAATTCTGGTACAAGGATA+TGG - chr5_4:2072801-2072820 Msa0829110:CDS 35.0%
!! TTCACATCTTTAAGGCATCA+AGG + chr5_4:2072835-2072854 None:intergenic 35.0%
TCAATTCAATAATGACCACC+AGG + chr5_4:2072911-2072930 None:intergenic 35.0%
ATTCTACAAAAAGGCCACAA+AGG + chr5_4:2072947-2072966 None:intergenic 35.0%
TATCGACATGTGAGTGAACA+CGG + chr5_4:2066378-2066397 None:intergenic 40.0%
TTTGAGAAGAGACAGGGTAA+GGG + chr5_4:2066457-2066476 None:intergenic 40.0%
GTAGTGTTTGAGAAGAGACA+GGG + chr5_4:2066463-2066482 None:intergenic 40.0%
TGTAGTGTTTGAGAAGAGAC+AGG + chr5_4:2066464-2066483 None:intergenic 40.0%
!!! GTTGTTTTTTCTGAAGACGG+CGG + chr5_4:2066547-2066566 None:intergenic 40.0%
CCCAAAGTGGAAAAGAAAGT+TGG - chr5_4:2066717-2066736 Msa0829110:CDS 40.0%
AAACACGAGCATGACCAATA+TGG + chr5_4:2066779-2066798 None:intergenic 40.0%
!! AGGCAGATATTTTAAGCACC+TGG - chr5_4:2066911-2066930 Msa0829110:intron 40.0%
!! GGCAGATATTTTAAGCACCT+GGG - chr5_4:2066912-2066931 Msa0829110:intron 40.0%
AAAATCGAAGTTGTGGCAAC+TGG + chr5_4:2067012-2067031 None:intergenic 40.0%
! TAGCTTGTATAAGGCGTATC+TGG - chr5_4:2067103-2067122 Msa0829110:intron 40.0%
CTGTTTATCCAATAGGGTCT+TGG - chr5_4:2067386-2067405 Msa0829110:intron 40.0%
GGGTCTTGGTAAAACATCTT+CGG - chr5_4:2067400-2067419 Msa0829110:intron 40.0%
AACATCTTCGGCTGATTACT+AGG - chr5_4:2067412-2067431 Msa0829110:intron 40.0%
! TTTAGCTGCTTTACACTGAG+TGG - chr5_4:2067567-2067586 Msa0829110:intron 40.0%
ACTGAGTGGTAGAGAGAAAA+AGG - chr5_4:2067581-2067600 Msa0829110:intron 40.0%
!!! GTTTTAAGGGAGTCCTCAAT+GGG - chr5_4:2067603-2067622 Msa0829110:intron 40.0%
TCCTCAATGGGTATAAGTTC+AGG - chr5_4:2067615-2067634 Msa0829110:intron 40.0%
CCTCAATGGGTATAAGTTCA+GGG - chr5_4:2067616-2067635 Msa0829110:intron 40.0%
CTAGGGCGAACATACAATAT+GGG - chr5_4:2067661-2067680 Msa0829110:CDS 40.0%
! GGGCCCCAAATTTTTCTTTT+AGG + chr5_4:2067763-2067782 None:intergenic 40.0%
AATGGTCAATAGACAGGGAA+TGG + chr5_4:2067921-2067940 None:intergenic 40.0%
GCATACTAAGATCCTGTAAC+AGG + chr5_4:2068066-2068085 None:intergenic 40.0%
GTAGATAATTGCCAGATCGA+AGG - chr5_4:2068100-2068119 Msa0829110:intron 40.0%
TAATTGTTTACCTGCTACCG+TGG - chr5_4:2068193-2068212 Msa0829110:intron 40.0%
GGTATGCGTACAATGTTGAT+GGG - chr5_4:2068502-2068521 Msa0829110:intron 40.0%
GTATGCGTACAATGTTGATG+GGG - chr5_4:2068503-2068522 Msa0829110:intron 40.0%
!!! ATCCTGCTGATTTTGCTCTT+TGG - chr5_4:2068634-2068653 Msa0829110:intron 40.0%
TTCCAAAGAGCAAAATCAGC+AGG + chr5_4:2068639-2068658 None:intergenic 40.0%
!!! TGCTGATTTTGCTCTTTGGA+AGG - chr5_4:2068638-2068657 Msa0829110:intron 40.0%
ATTCTGCAGTCTACAAAACC+AGG - chr5_4:2068801-2068820 Msa0829110:intron 40.0%
TTCTGCAGTCTACAAAACCA+GGG - chr5_4:2068802-2068821 Msa0829110:intron 40.0%
! GGTTACTCTTTTGACATCCA+CGG - chr5_4:2068906-2068925 Msa0829110:intron 40.0%
AGACATCTTCACTGAGTCAA+TGG + chr5_4:2069039-2069058 None:intergenic 40.0%
!!! AAACTTTTTCACGATACGGC+AGG - chr5_4:2069070-2069089 Msa0829110:intron 40.0%
TGTAGATGTTTACCATCCGT+TGG - chr5_4:2069198-2069217 Msa0829110:intron 40.0%
AATATCTCAAAGCCAACGGA+TGG + chr5_4:2069213-2069232 None:intergenic 40.0%
! ACTCAAAGTATCTGATGGGA+CGG + chr5_4:2069543-2069562 None:intergenic 40.0%
!! TTTTAGTGGGTCAGACATTC+CGG + chr5_4:2069636-2069655 None:intergenic 40.0%
CTATCTCGCTCTTTCATCAT+AGG - chr5_4:2069747-2069766 Msa0829110:CDS 40.0%
TGAAAGAATCTCGTCTTAGG+TGG - chr5_4:2069900-2069919 Msa0829110:intron 40.0%
! GTTTGGAGTTTGAACATGTG+TGG - chr5_4:2069922-2069941 Msa0829110:intron 40.0%
GTGTGGAGAAAATTTATGGG+AGG - chr5_4:2069939-2069958 Msa0829110:intron 40.0%
GTGGAGAAAATTTATGGGAG+GGG - chr5_4:2069941-2069960 Msa0829110:intron 40.0%
TAGAGAATTTCAGTCAAGCG+CGG - chr5_4:2070153-2070172 Msa0829110:CDS 40.0%
AGTTCGGGTATGCTCTATTT+AGG - chr5_4:2070202-2070221 Msa0829110:intron 40.0%
TCTTGCATCCAAACCCTAAA+TGG + chr5_4:2070244-2070263 None:intergenic 40.0%
ACACAACTACGATTGGAGTT+CGG + chr5_4:2070499-2070518 None:intergenic 40.0%
GCATATCTACCAATCCATCT+TGG - chr5_4:2070915-2070934 Msa0829110:intron 40.0%
TAGTTCAACGTGAACCAAGA+TGG + chr5_4:2070932-2070951 None:intergenic 40.0%
CTTGGTTCACGTTGAACTAT+AGG - chr5_4:2070933-2070952 Msa0829110:intron 40.0%
! TGTGTGTAAGTTTTGCTCCT+AGG + chr5_4:2071150-2071169 None:intergenic 40.0%
TGTTTGATATGCTAGGGCAT+GGG + chr5_4:2071208-2071227 None:intergenic 40.0%
TTGTTTGATATGCTAGGGCA+TGG + chr5_4:2071209-2071228 None:intergenic 40.0%
!! GCAGCTTTGAAGAAAAGCAT+CGG - chr5_4:2071661-2071680 Msa0829110:intron 40.0%
!! CAGCTTTGAAGAAAAGCATC+GGG - chr5_4:2071662-2071681 Msa0829110:intron 40.0%
!! AGCTTTGAAGAAAAGCATCG+GGG - chr5_4:2071663-2071682 Msa0829110:intron 40.0%
GCATGAGACCTAAAACAGTA+AGG + chr5_4:2071693-2071712 None:intergenic 40.0%
TCTTGCGTTGTGCGTTTAAA+TGG - chr5_4:2072011-2072030 Msa0829110:intron 40.0%
CCCTCTGCATTATTAACCAT+TGG - chr5_4:2072061-2072080 Msa0829110:intron 40.0%
GGCGGCAATAATATCAAATG+TGG + chr5_4:2072107-2072126 None:intergenic 40.0%
CATTTGATATTATTGCCGCC+TGG - chr5_4:2072107-2072126 Msa0829110:intron 40.0%
TGTTGAAGTAACTTCAGACC+AGG + chr5_4:2072128-2072147 None:intergenic 40.0%
TTTACGAAAATGGGGTGATG+TGG + chr5_4:2072247-2072266 None:intergenic 40.0%
! AAAGAATTGGTGGCATGACA+TGG - chr5_4:2072264-2072283 Msa0829110:intron 40.0%
TCGCACACACAGAATATGTA+GGG + chr5_4:2072441-2072460 None:intergenic 40.0%
! ACAGGTTTTACAGCAGCTTA+AGG - chr5_4:2072526-2072545 Msa0829110:intron 40.0%
CTTGAAGAAGATCGAAGAAC+GGG - chr5_4:2072589-2072608 Msa0829110:CDS 40.0%
GGATACTGCTCGAATACAAA+AGG - chr5_4:2072610-2072629 Msa0829110:CDS 40.0%
ATGCCAAATCCGATTCCATA+AGG - chr5_4:2072636-2072655 Msa0829110:CDS 40.0%
AAAAGTGGAAGCGACAATTC+TGG - chr5_4:2072788-2072807 Msa0829110:CDS 40.0%
ATCGACATGTGAGTGAACAC+GGG + chr5_4:2066377-2066396 None:intergenic 45.0%
ACATAGTCGCAAGACACCAA+TGG - chr5_4:2066428-2066447 Msa0829110:three_prime_UTR 45.0%
CATAGTCGCAAGACACCAAT+GGG - chr5_4:2066429-2066448 Msa0829110:three_prime_UTR 45.0%
GTTTGAGAAGAGACAGGGTA+AGG + chr5_4:2066458-2066477 None:intergenic 45.0%
! GAATTTTTCTCCGCCGTGAA+TGG + chr5_4:2066606-2066625 None:intergenic 45.0%
GCGGAGAAAAATTCTCACGA+CGG - chr5_4:2066612-2066631 Msa0829110:exon 45.0%
GAGAAAAATTCTCACGACGG+TGG - chr5_4:2066615-2066634 Msa0829110:CDS 45.0%
CTCACATGTGCTTATGCCAA+CGG + chr5_4:2067149-2067168 None:intergenic 45.0%
!!! GGTTTTAAGGGAGTCCTCAA+TGG - chr5_4:2067602-2067621 Msa0829110:intron 45.0%
CCCTGAACTTATACCCATTG+AGG + chr5_4:2067619-2067638 None:intergenic 45.0%
GGCCACCAAAATCTCAGAAA+CGG + chr5_4:2067642-2067661 None:intergenic 45.0%
!!! TTCTGAGATTTTGGTGGCCT+AGG - chr5_4:2067643-2067662 Msa0829110:CDS 45.0%
!! TCTGAGATTTTGGTGGCCTA+GGG - chr5_4:2067644-2067663 Msa0829110:CDS 45.0%
CCATATTGTATGTTCGCCCT+AGG + chr5_4:2067663-2067682 None:intergenic 45.0%
CCTAGGGCGAACATACAATA+TGG - chr5_4:2067660-2067679 Msa0829110:CDS 45.0%
!!! TTATTTTTTGGGGCCTAGGG+CGG - chr5_4:2067794-2067813 Msa0829110:intron 45.0%
ATTGCCAGATCGAAGGAGTT+AGG - chr5_4:2068107-2068126 Msa0829110:intron 45.0%
TTCTCCTAACTCCTTCGATC+TGG + chr5_4:2068114-2068133 None:intergenic 45.0%
!! TAGCGTCGACTCAAACTGAT+TGG + chr5_4:2068140-2068159 None:intergenic 45.0%
GGGTATGCGTACAATGTTGA+TGG - chr5_4:2068501-2068520 Msa0829110:intron 45.0%
GGTCTAGAAGATAATCGAGC+TGG - chr5_4:2068579-2068598 Msa0829110:intron 45.0%
AAGATAATCGAGCTGGTGAG+AGG - chr5_4:2068586-2068605 Msa0829110:intron 45.0%
AGATAATCGAGCTGGTGAGA+GGG - chr5_4:2068587-2068606 Msa0829110:intron 45.0%
!! AGAGGGTTGCTGTTGATTCA+AGG - chr5_4:2068604-2068623 Msa0829110:intron 45.0%
TCTGCAGTCTACAAAACCAG+GGG - chr5_4:2068803-2068822 Msa0829110:intron 45.0%
!! AAAACCAGGGGAGCCATTTT+GGG - chr5_4:2068815-2068834 Msa0829110:intron 45.0%
! TACTCTTTTGACATCCACGG+TGG - chr5_4:2068909-2068928 Msa0829110:intron 45.0%
! TGTGCCATTGTCCATGCAAT+TGG - chr5_4:2069364-2069383 Msa0829110:intron 45.0%
CTTGCCAATTGCATGGACAA+TGG + chr5_4:2069371-2069390 None:intergenic 45.0%
AGCAGCATGATCAGACAGTT+AGG - chr5_4:2069510-2069529 Msa0829110:intron 45.0%
GCATGATCAGACAGTTAGGA+AGG - chr5_4:2069514-2069533 Msa0829110:intron 45.0%
GTGAAGATCATCAGACATCG+AGG + chr5_4:2069597-2069616 None:intergenic 45.0%
TCTTCACACTCCAGTTGCAT+TGG - chr5_4:2069610-2069629 Msa0829110:intron 45.0%
GAATCTCGTCTTAGGTGGTT+TGG - chr5_4:2069905-2069924 Msa0829110:intron 45.0%
! TATGGGAGGGGTTGATCAAA+TGG - chr5_4:2069953-2069972 Msa0829110:intron 45.0%
AGTACAATGGTTAGAGGCAG+AGG - chr5_4:2069981-2070000 Msa0829110:intron 45.0%
GTACAATGGTTAGAGGCAGA+GGG - chr5_4:2069982-2070001 Msa0829110:intron 45.0%
TTGTCTAATCCATACGGCCA+AGG - chr5_4:2070099-2070118 Msa0829110:CDS 45.0%
TGTCTAATCCATACGGCCAA+GGG - chr5_4:2070100-2070119 Msa0829110:CDS 45.0%
GATTTAAACCCTTGGCCGTA+TGG + chr5_4:2070111-2070130 None:intergenic 45.0%
TCTTGCATCCAAACCCTGAA+TGG - chr5_4:2070441-2070460 Msa0829110:CDS 45.0%
AGTTCGGGTATGCTCCATTT+AGG + chr5_4:2070483-2070502 None:intergenic 45.0%
CACAACTACGATTGGAGTTC+GGG + chr5_4:2070498-2070517 None:intergenic 45.0%
CTCCAATCGTAGTTGTGTTG+CGG - chr5_4:2070501-2070520 Msa0829110:CDS 45.0%
TTCCGCAACACAACTACGAT+TGG + chr5_4:2070506-2070525 None:intergenic 45.0%
ATGTAGCTGACCCAATCTAG+TGG - chr5_4:2070594-2070613 Msa0829110:intron 45.0%
CAACGTGAACCAAGATGGAT+TGG + chr5_4:2070927-2070946 None:intergenic 45.0%
TGAGGGAAGAGAGAGAAACA+AGG - chr5_4:2070971-2070990 Msa0829110:intron 45.0%
GAGGGAAGAGAGAGAAACAA+GGG - chr5_4:2070972-2070991 Msa0829110:intron 45.0%
!! ACACACTAAGTGCTGAGAAG+TGG - chr5_4:2071165-2071184 Msa0829110:CDS 45.0%
TGCTGAGAAGTGGAGATTTC+CGG - chr5_4:2071175-2071194 Msa0829110:CDS 45.0%
! GGGGATGTCCTTACTGTTTT+AGG - chr5_4:2071682-2071701 Msa0829110:intron 45.0%
TGCGTTGTGCGTTTAAATGG+AGG - chr5_4:2072014-2072033 Msa0829110:intron 45.0%
TGAAGTAACTTCAGACCAGG+CGG + chr5_4:2072125-2072144 None:intergenic 45.0%
GGTGGCATGACATGGAAAAA+TGG - chr5_4:2072272-2072291 Msa0829110:intron 45.0%
GTCATGTAGATAGGTGTGAG+TGG - chr5_4:2072409-2072428 Msa0829110:CDS 45.0%
GTCGCACACACAGAATATGT+AGG + chr5_4:2072442-2072461 None:intergenic 45.0%
GCTCTTATGGATAGTCCGAA+TGG - chr5_4:2072683-2072702 Msa0829110:CDS 45.0%
ATAGTCCGAATGGCACAACT+TGG - chr5_4:2072693-2072712 Msa0829110:CDS 45.0%
TGAAGTTGAAGAGGAATGGC+AGG + chr5_4:2072722-2072741 None:intergenic 45.0%
GAAGCGACAATTCTGGTACA+AGG - chr5_4:2072795-2072814 Msa0829110:CDS 45.0%
!! CGAGGTTAGTGTTTTGTTCC+TGG - chr5_4:2072890-2072909 Msa0829110:CDS 45.0%
!! GGTTAGTGTTTTGTTCCTGG+TGG - chr5_4:2072893-2072912 Msa0829110:CDS 45.0%
!!! AAAAAAAAATGATTTTTTTT+TGG - chr5_4:2066862-2066881 Msa0829110:intron 5.0%
!! TTGAAATAATTTATAATTAT+AGG - chr5_4:2067318-2067337 Msa0829110:intron 5.0%
!! TTTATATATATTTATTAGTT+AGG + chr5_4:2067688-2067707 None:intergenic 5.0%
!! TTAAATTAAAAAACATTAAA+AGG - chr5_4:2070297-2070316 Msa0829110:CDS 5.0%
GTGTTGTGCAGCCATACTTC+CGG + chr5_4:2066669-2066688 None:intergenic 50.0%
!!! CAGGGCCGTTTCTGAGATTT+TGG - chr5_4:2067634-2067653 Msa0829110:intron 50.0%
!!! GGCCGTTTCTGAGATTTTGG+TGG - chr5_4:2067637-2067656 Msa0829110:intron 50.0%
CTTATACAGGGCCGTATCTG+AGG + chr5_4:2067837-2067856 None:intergenic 50.0%
CTCAGACACTTTCGGTTCCA+CGG + chr5_4:2068213-2068232 None:intergenic 50.0%
GGCATGTGCTCAGACACTTT+CGG + chr5_4:2068221-2068240 None:intergenic 50.0%
! CAAAACCAGGGGAGCCATTT+TGG - chr5_4:2068814-2068833 Msa0829110:intron 50.0%
CTGCATTCAATATGCCACCC+AGG + chr5_4:2068864-2068883 None:intergenic 50.0%
GCTATGAGTGCAGCCTATCT+TGG - chr5_4:2068885-2068904 Msa0829110:intron 50.0%
! TCTTTTGACATCCACGGTGG+AGG - chr5_4:2068912-2068931 Msa0829110:intron 50.0%
! CTTTTGACATCCACGGTGGA+GGG - chr5_4:2068913-2068932 Msa0829110:intron 50.0%
! CACGGTCTGAAGCACTTTCA+AGG + chr5_4:2069285-2069304 None:intergenic 50.0%
TGGCACACACAAGGAGAAGA+AGG + chr5_4:2069351-2069370 None:intergenic 50.0%
CATGGACAATGGCACACACA+AGG + chr5_4:2069360-2069379 None:intergenic 50.0%
ACGGCCAAGGGTTTAAATCG+CGG - chr5_4:2070112-2070131 Msa0829110:CDS 50.0%
GCAACCGCGATTTAAACCCT+TGG + chr5_4:2070119-2070138 None:intergenic 50.0%
TTTCAGTCAAGCGCGGTAAG+TGG - chr5_4:2070160-2070179 Msa0829110:intron 50.0%
CAGCCTCAATCGTAGGAGTT+CGG - chr5_4:2070186-2070205 Msa0829110:intron 50.0%
AGCCTCAATCGTAGGAGTTC+GGG - chr5_4:2070187-2070206 Msa0829110:intron 50.0%
TACCCGAACTCCTACGATTG+AGG + chr5_4:2070192-2070211 None:intergenic 50.0%
GGGTTTGGATGCAAGACATG+TGG - chr5_4:2070248-2070267 Msa0829110:intron 50.0%
GGGTTTGGATGCAAGACATG+TGG + chr5_4:2070248-2070267 None:intergenic 50.0%
GTTGCAGCATCAAACCGTCA+AGG + chr5_4:2070538-2070557 None:intergenic 50.0%
! GCTGACCCAATCTAGTGGAT+TGG - chr5_4:2070599-2070618 Msa0829110:intron 50.0%
GCTGAGAAGTGGAGATTTCC+GGG - chr5_4:2071176-2071195 Msa0829110:CDS 50.0%
GGGGTGATGTGGCAAAATAG+TGG + chr5_4:2072236-2072255 None:intergenic 50.0%
!! GACAGGGTAAGGGTACCCAT+TGG + chr5_4:2066447-2066466 None:intergenic 55.0%
! GCGAGAAGCGTGGTGGAAAA+GGG + chr5_4:2066489-2066508 None:intergenic 55.0%
! AGCGAGAAGCGTGGTGGAAA+AGG + chr5_4:2066490-2066509 None:intergenic 55.0%
TAAGCGGGGATAAGGGTTCG+AGG + chr5_4:2066519-2066538 None:intergenic 55.0%
!! TTTTTCTGAAGACGGCGGCG+CGG + chr5_4:2066542-2066561 None:intergenic 55.0%
AGACGGCGCGAAATGAAGGA+AGG + chr5_4:2066569-2066588 None:intergenic 55.0%
GATGAGACGGCGCGAAATGA+AGG + chr5_4:2066573-2066592 None:intergenic 55.0%
ATCCTCCTCCCAGCCATTCA+CGG - chr5_4:2066590-2066609 Msa0829110:three_prime_UTR 55.0%
TTTCTCCGCCGTGAATGGCT+GGG + chr5_4:2066601-2066620 None:intergenic 55.0%
! TTTTCTCCGCCGTGAATGGC+TGG + chr5_4:2066602-2066621 None:intergenic 55.0%
CCGGCGAAGGACTGTTTGAA+CGG + chr5_4:2066650-2066669 None:intergenic 55.0%
CCGTTCAAACAGTCCTTCGC+CGG - chr5_4:2066647-2066666 Msa0829110:CDS 55.0%
ACAGTCCTTCGCCGGAAGTA+TGG - chr5_4:2066655-2066674 Msa0829110:CDS 55.0%
! TATCTGAGGCAGGGCGAAGA+GGG + chr5_4:2067823-2067842 None:intergenic 55.0%
TCTTCGCCCTGCCTCAGATA+CGG - chr5_4:2067823-2067842 Msa0829110:intron 55.0%
ACTTTCGGTTCCACGGTAGC+AGG + chr5_4:2068206-2068225 None:intergenic 55.0%
!! AGCCATTTTGGGAGAGTCCC+TGG - chr5_4:2068826-2068845 Msa0829110:intron 55.0%
!! GCCATTTTGGGAGAGTCCCT+GGG - chr5_4:2068827-2068846 Msa0829110:intron 55.0%
!! CCATTTTGGGAGAGTCCCTG+GGG - chr5_4:2068828-2068847 Msa0829110:intron 55.0%
ATATGCCACCCAGGTCTTCC+AGG + chr5_4:2068855-2068874 None:intergenic 55.0%
! CACACTCCAGTTGCATTGGC+CGG - chr5_4:2069614-2069633 Msa0829110:intron 55.0%
GACATTCCGGCCAATGCAAC+TGG + chr5_4:2069623-2069642 None:intergenic 55.0%
!! CGACTTGCTGCATACTCGCA+AGG - chr5_4:2069664-2069683 Msa0829110:intron 55.0%
GTGGTGACAGCCTCAATCGT+AGG - chr5_4:2070179-2070198 Msa0829110:intron 55.0%
CTAGGGCATGGGTTTGAACC+CGG + chr5_4:2071197-2071216 None:intergenic 55.0%
TCAAAAAGCAGGGGTGGGTG+CGG - chr5_4:2071913-2071932 Msa0829110:intron 55.0%
GTCCGAATGGCACAACTTGG+AGG - chr5_4:2072696-2072715 Msa0829110:CDS 55.0%
! GGCCTCCAAGTTGTGCCATT+CGG + chr5_4:2072701-2072720 None:intergenic 55.0%
! TGAGTGAGCGAGAAGCGTGG+TGG + chr5_4:2066496-2066515 None:intergenic 60.0%
AGGTGAGTGAGCGAGAAGCG+TGG + chr5_4:2066499-2066518 None:intergenic 60.0%
TGGCTGGGAGGAGGATGAGA+CGG + chr5_4:2066586-2066605 None:intergenic 60.0%
TGCAGCCATACTTCCGGCGA+AGG + chr5_4:2066663-2066682 None:intergenic 60.0%
! GTATCTGAGGCAGGGCGAAG+AGG + chr5_4:2067824-2067843 None:intergenic 60.0%
! ACAGGGCCGTATCTGAGGCA+GGG + chr5_4:2067832-2067851 None:intergenic 60.0%
! TACAGGGCCGTATCTGAGGC+AGG + chr5_4:2067833-2067852 None:intergenic 60.0%
CTCTCCCAAAATGGCTCCCC+TGG + chr5_4:2068822-2068841 None:intergenic 60.0%
CCCCAGGGACTCTCCCAAAA+TGG + chr5_4:2068831-2068850 None:intergenic 60.0%
CAAGGTCAATCCCTCCACCG+TGG + chr5_4:2068926-2068945 None:intergenic 60.0%
CAAAAAGCAGGGGTGGGTGC+GGG - chr5_4:2071914-2071933 Msa0829110:intron 60.0%
AAAAAGCAGGGGTGGGTGCG+GGG - chr5_4:2071915-2071934 Msa0829110:intron 60.0%
GGCGCGGTAAGCGGGGATAA+GGG + chr5_4:2066526-2066545 None:intergenic 65.0%
CTCCTCCCAGCCATTCACGG+CGG - chr5_4:2066593-2066612 Msa0829110:three_prime_UTR 65.0%
CCAGGTCTTCCAGGACCCCA+GGG + chr5_4:2068846-2068865 None:intergenic 65.0%
CCTGGGGTCCTGGAAGACCT+GGG - chr5_4:2068844-2068863 Msa0829110:intron 65.0%
AAAACCCACCCCGCCAGACC+CGG + chr5_4:2071950-2071969 None:intergenic 65.0%
CGGCGCGGTAAGCGGGGATA+AGG + chr5_4:2066527-2066546 None:intergenic 70.0%
AAGACGGCGGCGCGGTAAGC+GGG + chr5_4:2066534-2066553 None:intergenic 70.0%
GAAGACGGCGGCGCGGTAAG+CGG + chr5_4:2066535-2066554 None:intergenic 70.0%
CGCCGTGAATGGCTGGGAGG+AGG + chr5_4:2066595-2066614 None:intergenic 70.0%
CTCCGCCGTGAATGGCTGGG+AGG + chr5_4:2066598-2066617 None:intergenic 70.0%
TGGGAGAGTCCCTGGGGTCC+TGG - chr5_4:2068834-2068853 Msa0829110:intron 70.0%
CCCTGGGGTCCTGGAAGACC+TGG - chr5_4:2068843-2068862 Msa0829110:intron 70.0%
CCCAGGTCTTCCAGGACCCC+AGG + chr5_4:2068847-2068866 None:intergenic 70.0%
GGGGTCCTGGAAGACCTGGG+TGG - chr5_4:2068847-2068866 Msa0829110:intron 70.0%
GGCAGGTAACGCAGCCCCGA+TGG - chr5_4:2069087-2069106 Msa0829110:intron 70.0%
AGACGGCGGCGCGGTAAGCG+GGG + chr5_4:2066533-2066552 None:intergenic 75.0%
GCGAAGAGGGCGACCGCCCT+AGG + chr5_4:2067810-2067829 None:intergenic 75.0%
AAGCAGGGGTGGGTGCGGGG+TGG - chr5_4:2071918-2071937 Msa0829110:intron 75.0%
AGCAGGGGTGGGTGCGGGGT+GGG - chr5_4:2071919-2071938 Msa0829110:intron 75.0%
! GCAGGGGTGGGTGCGGGGTG+GGG - chr5_4:2071920-2071939 Msa0829110:intron 80.0%
! CAGGGGTGGGTGCGGGGTGG+GGG - chr5_4:2071921-2071940 Msa0829110:intron 80.0%
! GGGTGGGTGCGGGGTGGGGG+CGG - chr5_4:2071924-2071943 Msa0829110:intron 85.0%
! GTGGGGGCGGCCGGGTCTGG+CGG - chr5_4:2071937-2071956 Msa0829110:intron 85.0%
! TGGGGGCGGCCGGGTCTGGC+GGG - chr5_4:2071938-2071957 Msa0829110:intron 85.0%
! GCGGCCGGGTCTGGCGGGGT+GGG - chr5_4:2071943-2071962 Msa0829110:intron 85.0%
! GGGTGCGGGGTGGGGGCGGC+CGG - chr5_4:2071928-2071947 Msa0829110:intron 90.0%
! GGTGCGGGGTGGGGGCGGCC+GGG - chr5_4:2071929-2071948 Msa0829110:intron 90.0%
! GGGGTGGGGGCGGCCGGGTC+TGG - chr5_4:2071934-2071953 Msa0829110:intron 90.0%
! GGGGGCGGCCGGGTCTGGCG+GGG - chr5_4:2071939-2071958 Msa0829110:intron 90.0%
! GGCGGCCGGGTCTGGCGGGG+TGG - chr5_4:2071942-2071961 Msa0829110:intron 90.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 2066353 2073015 2066353 ID=Msa0829110;Name=Msa0829110
chr5_4 mRNA 2066353 2073015 2066353 ID=Msa0829110-mRNA-1;Parent=Msa0829110;Name=Msa0829110-mRNA-1;_AED=0.12;_eAED=0.12;_QI=94|1|1|1|1|1|9|261|570
chr5_4 exon 2066353 2066838 2066353 ID=Msa0829110-mRNA-1:exon:614;Parent=Msa0829110-mRNA-1
chr5_4 exon 2067639 2067740 2067639 ID=Msa0829110-mRNA-1:exon:613;Parent=Msa0829110-mRNA-1
chr5_4 exon 2069683 2069886 2069683 ID=Msa0829110-mRNA-1:exon:612;Parent=Msa0829110-mRNA-1
chr5_4 exon 2070047 2070172 2070047 ID=Msa0829110-mRNA-1:exon:611;Parent=Msa0829110-mRNA-1
chr5_4 exon 2070277 2070558 2070277 ID=Msa0829110-mRNA-1:exon:610;Parent=Msa0829110-mRNA-1
chr5_4 exon 2070709 2070879 2070709 ID=Msa0829110-mRNA-1:exon:609;Parent=Msa0829110-mRNA-1
chr5_4 exon 2071103 2071264 2071103 ID=Msa0829110-mRNA-1:exon:608;Parent=Msa0829110-mRNA-1
chr5_4 exon 2072388 2072451 2072388 ID=Msa0829110-mRNA-1:exon:607;Parent=Msa0829110-mRNA-1
chr5_4 exon 2072545 2073015 2072545 ID=Msa0829110-mRNA-1:exon:606;Parent=Msa0829110-mRNA-1
chr5_4 five_prime_UTR 2072922 2073015 2072922 ID=Msa0829110-mRNA-1:five_prime_utr;Parent=Msa0829110-mRNA-1
chr5_4 CDS 2072545 2072921 2072545 ID=Msa0829110-mRNA-1:cds;Parent=Msa0829110-mRNA-1
chr5_4 CDS 2072388 2072451 2072388 ID=Msa0829110-mRNA-1:cds;Parent=Msa0829110-mRNA-1
chr5_4 CDS 2071103 2071264 2071103 ID=Msa0829110-mRNA-1:cds;Parent=Msa0829110-mRNA-1
chr5_4 CDS 2070709 2070879 2070709 ID=Msa0829110-mRNA-1:cds;Parent=Msa0829110-mRNA-1
chr5_4 CDS 2070277 2070558 2070277 ID=Msa0829110-mRNA-1:cds;Parent=Msa0829110-mRNA-1
chr5_4 CDS 2070047 2070172 2070047 ID=Msa0829110-mRNA-1:cds;Parent=Msa0829110-mRNA-1
chr5_4 CDS 2069683 2069886 2069683 ID=Msa0829110-mRNA-1:cds;Parent=Msa0829110-mRNA-1
chr5_4 CDS 2067639 2067740 2067639 ID=Msa0829110-mRNA-1:cds;Parent=Msa0829110-mRNA-1
chr5_4 CDS 2066614 2066838 2066614 ID=Msa0829110-mRNA-1:cds;Parent=Msa0829110-mRNA-1
chr5_4 three_prime_UTR 2066353 2066613 2066353 ID=Msa0829110-mRNA-1:three_prime_utr;Parent=Msa0829110-mRNA-1
Gene Sequence

>Msa0829110

ATGGGTACCCTTACCCTGTCTCTTCTCAAACACTACACACCCTTTTCCACCACGCTTCTCGCTCACTCACCTCGAACCCTTATCCCCGCTTACCGCGCCGCCGTCTTCAGAAAAAACAACCTTCCTTCATTTCGCGCCGTCTCATCCTCCTCCCAGCCATTCACGGCGGAGAAAAATTCTCACGACGGTGGTGAAAATTTCCGTTCAAACAGTCCTTCGCCGGAAGTATGGCTGCACAACACAATGAGTAAAAAGAAAGAGATTTTTAAGCCCAAAGTGGAAAAGAAAGTTGGAATGTATGTTTGTGGCGTTACTGCTTATGATCTTAGCCATATTGGTCATGCTCGTGTTTACGTCAATTTCGATCTTCTTTACAGATATTTTAAGCACCTGGGATTTGAAGTTTGTTATGTTCGCAATTTTACAGATGTAGATGACAAGATAATTGCCAGATCGAAGGAGTTAGGAGAAGATCCAATCAGTTTGAGTCGACGCTATTGTGAAGAGTTTTGTCAAGACATGGTAACTCTTAATTGTTTACCTGCTACCGTGGAACCGAAAGTGTCTGAGCACATGCCCCAAATCATTGATATGATTGAGAAGATTCTTAATAATGGGTATGCGTACAATGTTGATGGGGATATATACTTTAATGTAGAAAAATTTCCAGAATATGGGAAATTATCAAGTCGAGGTCTAGAAGATAATCGAGCTGGTGAGAGGGTTGCTGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTCTTTGGAAGTCTACAAAACCAGGGGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGGTGGCATATTGAATGCAGTGCTATGAGTGCAGCCTATCTTGGTTACTCTTTTGACATCCACGGTGGAGGGATTGACCTTGTATTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCTTGTAGTAAAAGTGATATTAGTGTATGGATGCACAATGGTTTTGTCACCATTGACTCAGTGAAGATGTCTAAATCTCTGGGAAACTTTTTCACGATACGGCAGGTTGTAGATGTTTACCATCCGTTGGCTTTGAGATATTTTTTGATGAGTGCTCATTATAGATCTCCCATGAACTACTCTAATATACACCTTGAAAGTGCTTCAGACCGTGTTTTTTATATATACGAGACATTACATGAATGTGAAAGCTTTCTGAAGCAGCATGATCAGACAGTTAGGAAGGATTCCGTCCCATCAGATACTTTGAGTATTATCGATAACTTCTATGATGTTTTTCGGACCTCGATGTCTGATGATCTTCACACTCCAGTTGCATTGGCCGGAATGTCTGACCCACTAAAATTAATTAACGACTTGCTGCATACTCGCAAGGGAAAAAAACAGCAATTTCGAATAGAATCACTTGCAGCTTTGAAGAAAAGCATCGGGGATGTCCTTACTGTTTTAGGTCTCATGCCTTCAAGTTATTATGAGGTTTTACAGCAGCTTAAGGAGAAAGCTCTGAATCGTGCAAACTTGACAGAAGTTGAAATCTTGAAGAAGATCGAAGAACGGGATACTGCTCGAATACAAAAGGAGTATGCCAAATCCGATTCCATAAGGAAAGATTTAGCTGTTCTTGGTATTGCTCTTATGGATAGTCCGAATGGCACAACTTGGAGGCCTGCCATTCCTCTTCAACTTCAAGAACAACTCTAG

Protein sequence

>Msa0829110

MGTLTLSLLKHYTPFSTTLLAHSPRTLIPAYRAAVFRKNNLPSFRAVSSSSQPFTAEKNSHDGGENFRSNSPSPEVWLHNTMSKKKEIFKPKVEKKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFEVCYVRNFTDVDDKIIARSKELGEDPISLSRRYCEEFCQDMVTLNCLPATVEPKVSEHMPQIIDMIEKILNNGYAYNVDGDIYFNVEKFPEYGKLSSRGLEDNRAGERVAVDSRKKNPADFALWKSTKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACSKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQVVDVYHPLALRYFLMSAHYRSPMNYSNIHLESASDRVFYIYETLHECESFLKQHDQTVRKDSVPSDTLSIIDNFYDVFRTSMSDDLHTPVALAGMSDPLKLINDLLHTRKGKKQQFRIESLAALKKSIGDVLTVLGLMPSSYYEVLQQLKEKALNRANLTEVEILKKIEERDTARIQKEYAKSDSIRKDLAVLGIALMDSPNGTTWRPAIPLQLQEQL*