AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0772770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0772770 MtrunA17_Chr5g0402651 96.512 344 12 0 1 344 1 344 0.0 674
Msa0772770 MtrunA17_Chr3g0100321 41.553 219 95 5 125 340 152 340 1.18e-50 172
Msa0772770 MtrunA17_Chr3g0100321 38.776 98 56 1 246 343 145 238 1.56e-15 76.6
Msa0772770 MtrunA17_Chr5g0408111 45.783 83 44 1 261 342 51 133 2.99e-19 82.8
Msa0772770 MtrunA17_Chr5g0408111 42.857 84 47 1 124 206 47 130 3.38e-19 82.8
Msa0772770 MtrunA17_Chr5g0393651 40.789 76 44 1 131 205 65 140 7.33e-15 70.9
Msa0772770 MtrunA17_Chr5g0393651 37.647 85 46 2 260 340 61 142 2.32e-13 66.6
Msa0772770 MtrunA17_Chr3g0100001 49.057 53 27 0 269 321 24 76 7.62e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0772770 AT1G49520.1 45.404 359 142 8 1 339 1 325 2.49e-86 265
Msa0772770 AT1G49520.1 55.970 134 51 2 126 259 245 370 1.45e-41 149
Msa0772770 AT3G19080.4 59.009 222 75 3 125 344 257 464 6.92e-83 259
Msa0772770 AT3G19080.4 42.416 356 170 6 1 339 1 338 1.02e-79 251
Msa0772770 AT3G19080.3 59.009 222 75 3 125 344 257 464 6.92e-83 259
Msa0772770 AT3G19080.3 42.416 356 170 6 1 339 1 338 1.02e-79 251
Msa0772770 AT3G19080.1 59.009 222 73 4 125 344 257 462 2.25e-81 255
Msa0772770 AT3G19080.1 42.416 356 170 6 1 339 1 338 1.51e-79 250
Msa0772770 AT3G19080.2 42.222 360 173 6 1 343 1 342 1.49e-79 250
Msa0772770 AT3G19080.2 56.906 181 62 3 125 303 257 423 1.99e-60 200
Msa0772770 AT4G22360.1 39.256 242 116 5 103 341 170 383 1.48e-49 170
Msa0772770 AT2G35605.1 51.220 82 39 1 262 342 27 108 2.01e-22 90.9
Msa0772770 AT2G35605.1 42.308 78 44 1 129 205 27 104 5.92e-17 76.3
Msa0772770 AT3G03590.1 46.392 97 46 2 247 342 51 142 3.29e-21 89.0
Msa0772770 AT3G03590.1 37.662 77 47 1 131 206 63 139 1.72e-15 73.2
Msa0772770 AT1G31760.1 48.810 84 42 1 260 342 28 111 4.86e-21 87.4
Msa0772770 AT1G31760.1 35.443 79 50 1 129 206 30 108 2.65e-11 60.5
Msa0772770 AT2G14880.1 38.739 111 63 2 231 340 35 141 3.23e-19 83.2
Msa0772770 AT2G14880.1 42.857 77 43 1 131 206 64 140 1.15e-16 76.3
Msa0772770 AT4G34290.1 46.835 79 41 1 263 340 66 144 4.58e-19 82.8
Msa0772770 AT4G34290.1 40.789 76 44 1 131 205 67 142 3.99e-15 72.0
Msa0772770 AT4G26810.2 49.057 53 27 0 269 321 24 76 4.88e-12 62.4
Msa0772770 AT4G26810.1 49.057 53 27 0 269 321 24 76 4.88e-12 62.4

Find 115 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTTTCTCGTTAAGGAATT+AGG 0.160113 5_2:-47118909 None:intergenic
CTTCTTCATCGGAACCTTCT+TGG 0.216987 5_2:-47119270 None:intergenic
AGCAATTGTGGGCCTATATT+AGG 0.228412 5_2:+47121240 Msa0772770:CDS
ATGATATTTCTCCTATTGTT+TGG 0.273153 5_2:-47121281 None:intergenic
AGAATGTGGGATTATATAAA+AGG 0.275179 5_2:+47122282 Msa0772770:CDS
TGATGGTGTCAACACCAAAA+AGG 0.284532 5_2:-47121325 None:intergenic
TTTATTTATCAAAATAGTTT+TGG 0.291730 5_2:+47123122 Msa0772770:three_prime_UTR
AATGAATTGTCAGTAGAAAA+TGG 0.293404 5_2:-47123345 None:intergenic
AACATTATCCTTGCATATTC+AGG 0.295769 5_2:-47123318 None:intergenic
GAACCTTCTTGGCTTTGTTC+TGG 0.303197 5_2:-47119259 None:intergenic
TTGCCAATACTTTATTCATT+TGG 0.308896 5_2:-47121355 None:intergenic
GAGAGAACACAGAGGACATT+AGG 0.312172 5_2:+47118854 None:intergenic
AAGTATTGGCAAAGCATATC+TGG 0.312371 5_2:+47121366 Msa0772770:CDS
TTCAATCTGTGTCCCTAGTT+GGG 0.324474 5_2:+47118942 Msa0772770:five_prime_UTR
GCAATTGTGGGCCTATATTA+GGG 0.336373 5_2:+47121241 Msa0772770:CDS
AGAGAACACAGAGGACATTA+GGG 0.340306 5_2:+47118855 None:intergenic
TGATATTTCTCCTATTGTTT+GGG 0.343586 5_2:-47121280 None:intergenic
TCCGATTCGGATACCATGTT+TGG 0.351079 5_2:-47119022 None:intergenic
TAGCCTGTCTCCGCAACTTC+AGG 0.352852 5_2:+47121021 Msa0772770:CDS
AATATTTGCCTCTTGTTTGA+AGG 0.354724 5_2:-47122948 None:intergenic
TTTCAGCATGGTCTGCAAAC+TGG 0.369337 5_2:+47123166 Msa0772770:three_prime_UTR
ACCTCAGTCCTGGCCATCTC+TGG 0.373993 5_2:-47121058 None:intergenic
ATTCATTTGGAACATATTGA+TGG 0.375912 5_2:-47121342 None:intergenic
CGTCAGTTAGAATCCGATTT+CGG 0.392425 5_2:+47119115 Msa0772770:CDS
TATAAAAGGAAACAACCTTC+AGG 0.393933 5_2:+47122296 Msa0772770:CDS
CGTCTTGTTGAATGGTTTGA+AGG 0.402587 5_2:-47119189 None:intergenic
GGTCTGCAAACTGGAGGAAT+AGG 0.408022 5_2:+47123175 Msa0772770:three_prime_UTR
GAAGTCTTTCATTCGAGAAC+AGG 0.409624 5_2:+47119156 Msa0772770:CDS
GAAGCCCTTGCGAAGTTCCT+TGG 0.411064 5_2:+47122225 Msa0772770:CDS
GGATAAATCGATACCGAAAT+CGG 0.416058 5_2:-47119128 None:intergenic
CCTTTGGTGCCGACTTCACC+TGG 0.423111 5_2:-47121816 None:intergenic
TTTCAATCTGTGTCCCTAGT+TGG 0.427089 5_2:+47118941 Msa0772770:five_prime_UTR
TGGTTCATCGTCTTGTTGAA+TGG 0.432543 5_2:-47119197 None:intergenic
ATTTGCAAGACCCAAACAAT+AGG 0.435419 5_2:+47121270 Msa0772770:CDS
TTTGATGTTGACTCCTTCGT+TGG 0.441452 5_2:+47122996 Msa0772770:CDS
ATCTCTTGATATAGTTATCC+AGG 0.447405 5_2:+47121798 Msa0772770:intron
CTTAGGTTGTTAAGCAATTG+TGG 0.448043 5_2:+47121228 Msa0772770:intron
CGTTCATTCATTTCCAAACA+TGG 0.450935 5_2:+47119009 Msa0772770:exon
ATCAGCATCTTCTTCTTCTA+CGG 0.453195 5_2:-47119230 None:intergenic
TGGAAATGAATGAACGAGTT+GGG 0.456113 5_2:-47119002 None:intergenic
CCTAATTCCTTAACGAGAAA+CGG 0.457154 5_2:+47118909 Msa0772770:five_prime_UTR
AAAGGAAAAGCCGGCACCAA+AGG 0.459487 5_2:+47121834 Msa0772770:CDS
ACACTACCTCTGGCACGCTT+CGG 0.460765 5_2:-47119319 None:intergenic
ACGGCGGACGGTGGAGGTAG+TGG 0.461182 5_2:-47119095 None:intergenic
ATTCCTGAAGTTGCGGAGAC+AGG 0.469123 5_2:-47121024 None:intergenic
CTAATTCCTTAACGAGAAAC+GGG 0.473617 5_2:+47118910 Msa0772770:five_prime_UTR
TTAGGTTGTTAAGCAATTGT+GGG 0.474302 5_2:+47121229 Msa0772770:intron
TGGTGTTGAGGTCGGAGTTA+CGG 0.477260 5_2:-47119072 None:intergenic
CTTTACTGTTACAAAACTGC+TGG 0.478610 5_2:+47123019 Msa0772770:CDS
ATGCTGAAAAGATACATAAA+CGG 0.479129 5_2:-47123152 None:intergenic
AAAGGAAAAGCCTGCACGAA+AGG 0.483299 5_2:+47121852 Msa0772770:CDS
GTTCCAAATGAATAAAGTAT+TGG 0.492687 5_2:+47121352 Msa0772770:CDS
TACTTCAGATCTAACAAGTC+AGG 0.494771 5_2:+47120950 Msa0772770:intron
CATTGTTATGCGGCTATGCA+TGG 0.496003 5_2:+47123081 Msa0772770:three_prime_UTR
GGCAAAGCATATCTGGCCAT+TGG 0.496437 5_2:+47121373 Msa0772770:CDS
ATTATCATCATCTTCTTCAT+CGG 0.499833 5_2:-47119281 None:intergenic
TCCAAACATGGTATCCGAAT+CGG 0.500956 5_2:+47119021 Msa0772770:exon
GGTAGTGGTGGTGTTGAGGT+CGG 0.502781 5_2:-47119080 None:intergenic
AGGACATTAGGGGCACGTGT+GGG 0.506650 5_2:+47118866 Msa0772770:five_prime_UTR
TTGGAGCACCAGAGATGGCC+AGG 0.514342 5_2:+47121050 Msa0772770:CDS
CCAGGTGAAGTCGGCACCAA+AGG 0.514541 5_2:+47121816 Msa0772770:CDS
TGCTCTGTCTTTATGAAATG+AGG 0.518736 5_2:-47123044 None:intergenic
TGGCCATTGGATTCAGATGA+TGG 0.519178 5_2:+47121386 Msa0772770:CDS
TTTCTCCAAGGAACTTCGCA+AGG 0.521239 5_2:-47122230 None:intergenic
GGACATTAGGGGCACGTGTG+GGG 0.522776 5_2:+47118867 Msa0772770:five_prime_UTR
GTCGGCACCAAAGGAAAAGC+CGG 0.523087 5_2:+47121825 Msa0772770:CDS
AAACGGCAGAAAGTAGGATC+AGG 0.524034 5_2:+47122171 Msa0772770:CDS
CTGATGTCATTAAAAGAATG+TGG 0.528437 5_2:+47122268 Msa0772770:CDS
CCGCAACTTCAGGAATTCGT+TGG 0.532178 5_2:+47121031 Msa0772770:CDS
TTGATAATTCACTTTCTCCA+AGG 0.534216 5_2:-47122242 None:intergenic
TAACTGACGGCGGACGGTGG+AGG 0.538186 5_2:-47119101 None:intergenic
AAACCAGAACAAAGCCAAGA+AGG 0.552141 5_2:+47119256 Msa0772770:CDS
TGAAGAAGATGATGATAATG+AGG 0.552674 5_2:+47119285 Msa0772770:CDS
ATTGTTATGCGGCTATGCAT+GGG 0.552734 5_2:+47123082 Msa0772770:three_prime_UTR
GACATTAGGGGCACGTGTGG+GGG 0.552807 5_2:+47118868 Msa0772770:five_prime_UTR
TCAATCTGTGTCCCTAGTTG+GGG 0.559438 5_2:+47118943 Msa0772770:five_prime_UTR
CAGAAAGTAGGATCAGGAAA+AGG 0.564785 5_2:+47122177 Msa0772770:CDS
GAGGACATTAGGGGCACGTG+TGG 0.569184 5_2:+47118865 Msa0772770:five_prime_UTR
TTGGAAATGAATGAACGAGT+TGG 0.572259 5_2:-47119003 None:intergenic
TGAAGGATCCTTCAAACAAG+AGG 0.572546 5_2:+47122940 Msa0772770:intron
ATCTAACAAGTCAGGTGATG+AGG 0.574266 5_2:+47120958 Msa0772770:CDS
GCGGTCGATGAGTTCCGATT+CGG 0.575084 5_2:-47119035 None:intergenic
AGGGCTTCAGATAGCTGAAG+TGG 0.579024 5_2:-47122210 None:intergenic
TGGAGGTAGTGGTGGTGTTG+AGG 0.579175 5_2:-47119084 None:intergenic
TACGGAGGAACTCACGGAGG+CGG 0.580924 5_2:-47119054 None:intergenic
ATTCGTTGGAGCACCAGAGA+TGG 0.583970 5_2:+47121045 Msa0772770:CDS
CGAAGAACAAGAAGAAAGAA+CGG 0.585683 5_2:+47119350 Msa0772770:CDS
CTTTAGTTCCTGAATATGCA+AGG 0.587395 5_2:+47123310 Msa0772770:three_prime_UTR
CCAACGAATTCCTGAAGTTG+CGG 0.591157 5_2:-47121031 None:intergenic
TGATGTCATTAAAAGAATGT+GGG 0.591311 5_2:+47122269 Msa0772770:CDS
TTCGGATGAGCCGAAAGGAA+AGG 0.595087 5_2:+47122146 Msa0772770:CDS
TTCTAACTGACGGCGGACGG+TGG 0.596066 5_2:-47119104 None:intergenic
GCGGACGGTGGAGGTAGTGG+TGG 0.597812 5_2:-47119092 None:intergenic
AAACAAGAGAGAGACGATGA+TGG 0.599144 5_2:+47121886 Msa0772770:CDS
CAGCATGGTCTGCAAACTGG+AGG 0.602324 5_2:+47123169 Msa0772770:three_prime_UTR
CGGAGTTACGGAGGAACTCA+CGG 0.605138 5_2:-47119060 None:intergenic
AGTGTTGATATTAATACATG+AGG 0.605502 5_2:+47123371 Msa0772770:three_prime_UTR
TTCTCCAAGGAACTTCGCAA+GGG 0.610057 5_2:-47122229 None:intergenic
GGATTCTAACTGACGGCGGA+CGG 0.611400 5_2:-47119107 None:intergenic
ACCAGAGATGGCCAGGACTG+AGG 0.615266 5_2:+47121057 Msa0772770:CDS
AGTAAGCATCATGACTCAGT+CGG 0.615763 5_2:+47123399 Msa0772770:three_prime_UTR
TCGAATGAAAGACTTCCTAT+CGG 0.618751 5_2:-47119149 None:intergenic
TCGGTATCGATTTATCCGAT+AGG 0.620387 5_2:+47119134 Msa0772770:CDS
TATAGTTATCCAGGTGAAGT+CGG 0.624310 5_2:+47121807 Msa0772770:intron
ATACCATCATCTGAATCCAA+TGG 0.626561 5_2:-47121389 None:intergenic
ACAGATTCGGATGAGCCGAA+AGG 0.642657 5_2:+47122141 Msa0772770:intron
TGTAACAGTAAAGCCAACGA+AGG 0.655110 5_2:-47123009 None:intergenic
GTTGCTTGCACATTGTTATG+CGG 0.660935 5_2:+47123071 Msa0772770:three_prime_UTR
CAAAACTTTCCACTACCAAG+TGG 0.671805 5_2:-47123281 None:intergenic
CGAAATCGGATTCTAACTGA+CGG 0.675405 5_2:-47119114 None:intergenic
TGTTGAGGTCGGAGTTACGG+AGG 0.704070 5_2:-47119069 None:intergenic
GAGAACACAGAGGACATTAG+GGG 0.722037 5_2:+47118856 None:intergenic
AATCGGATTCTAACTGACGG+CGG 0.749844 5_2:-47119111 None:intergenic
AGTACATAGAGAGAACACAG+AGG 0.817550 5_2:+47118846 None:intergenic
AGTTACGGAGGAACTCACGG+AGG 0.834466 5_2:-47119057 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATTTTGATTTCTTATT+CGG - chr5_2:47120018-47120037 None:intergenic 10.0%
!!! TATTTTGTTTATTTATTGTT+TGG - chr5_2:47120565-47120584 None:intergenic 10.0%
!!! TTTATTTATCAAAATAGTTT+TGG + chr5_2:47123122-47123141 Msa0772770:three_prime_UTR 10.0%
!! AAAGAAATATTTACAACTAT+AGG - chr5_2:47120888-47120907 None:intergenic 15.0%
!!! ATAGTTGTAAATATTTCTTT+TGG + chr5_2:47120888-47120907 Msa0772770:intron 15.0%
!! AATAACAAAAAATAGTAAGA+AGG - chr5_2:47121435-47121454 None:intergenic 15.0%
!! TCTTGTCTAAAAATTTATAA+CGG - chr5_2:47121498-47121517 None:intergenic 15.0%
!!! CTTTATTTAAGCAATATATA+TGG - chr5_2:47122350-47122369 None:intergenic 15.0%
!!! CATTCAAAATTTATTCATTT+TGG + chr5_2:47122423-47122442 Msa0772770:intron 15.0%
!! TAAACATTACGACAAATATA+GGG - chr5_2:47120603-47120622 None:intergenic 20.0%
!! ATAAACATTACGACAAATAT+AGG - chr5_2:47120604-47120623 None:intergenic 20.0%
!! TATTCTTAACTGTTAGTATT+GGG - chr5_2:47121133-47121152 None:intergenic 20.0%
!! ATATTCTTAACTGTTAGTAT+TGG - chr5_2:47121134-47121153 None:intergenic 20.0%
!! AGGAATTTAAAAAAGGATTA+GGG - chr5_2:47121522-47121541 None:intergenic 20.0%
!! TTGTCTACAAGAATAAAATA+GGG - chr5_2:47121761-47121780 None:intergenic 20.0%
!! ATTGTCTACAAGAATAAAAT+AGG - chr5_2:47121762-47121781 None:intergenic 20.0%
!! TGAAATGATTTCAAATAATG+TGG - chr5_2:47121983-47122002 None:intergenic 20.0%
!!! AAACTTTTTAATGAAACCTA+TGG + chr5_2:47122019-47122038 Msa0772770:intron 20.0%
!!! ATTTTTAAACAGTTAATTGC+TGG + chr5_2:47122521-47122540 Msa0772770:intron 20.0%
!! TTATGTTGTAACAGAAAAAT+GGG - chr5_2:47122567-47122586 None:intergenic 20.0%
!! TTTATGTTGTAACAGAAAAA+TGG - chr5_2:47122568-47122587 None:intergenic 20.0%
!!! TTATAGCTTTTTTATATAGC+TGG - chr5_2:47122661-47122680 None:intergenic 20.0%
!!! TTTATCAAAATAGTTTTGGA+AGG + chr5_2:47123126-47123145 Msa0772770:three_prime_UTR 20.0%
!! AAACATGTTAAAAACGATAA+TGG - chr5_2:47123259-47123278 None:intergenic 20.0%
! ATTATCATCATCTTCTTCAT+CGG - chr5_2:47119284-47119303 None:intergenic 25.0%
! TTTAATCGAAACAAACTTGA+AGG - chr5_2:47119425-47119444 None:intergenic 25.0%
!! GAAACTTTTGATCACAATAT+TGG + chr5_2:47120363-47120382 Msa0772770:intron 25.0%
! AGTATCAATATTTCACTTCA+AGG - chr5_2:47120454-47120473 None:intergenic 25.0%
!! TTTATTTATTGTTTGGAGCA+GGG - chr5_2:47120558-47120577 None:intergenic 25.0%
! TATTTGCCTTGCAAAATATT+GGG - chr5_2:47120640-47120659 None:intergenic 25.0%
! ATATTTGCCTTGCAAAATAT+TGG - chr5_2:47120641-47120660 None:intergenic 25.0%
! TTTACCTAAATCAATTGAAG+AGG + chr5_2:47120681-47120700 Msa0772770:intron 25.0%
!!! TTTTCCTCTTCAATTGATTT+AGG - chr5_2:47120688-47120707 None:intergenic 25.0%
! TGTCAAGTTATCAGTTATAT+TGG - chr5_2:47120743-47120762 None:intergenic 25.0%
! ATATAACTGATAACTTGACA+TGG + chr5_2:47120743-47120762 Msa0772770:intron 25.0%
! TATAACTGATAACTTGACAT+GGG + chr5_2:47120744-47120763 Msa0772770:intron 25.0%
! GCATGTAAAAATACAAAAAC+AGG - chr5_2:47120831-47120850 None:intergenic 25.0%
!! GTTGTAAATATTTCTTTTGG+AGG + chr5_2:47120891-47120910 Msa0772770:intron 25.0%
! ATTCTTAACTGTTAGTATTG+GGG - chr5_2:47121132-47121151 None:intergenic 25.0%
! TTTCTTTAAATGTGAGTGTT+TGG + chr5_2:47121160-47121179 Msa0772770:intron 25.0%
!! CAAATTTTTCTCCCTAATAT+AGG - chr5_2:47121255-47121274 None:intergenic 25.0%
! TGATATTTCTCCTATTGTTT+GGG - chr5_2:47121283-47121302 None:intergenic 25.0%
! ATGATATTTCTCCTATTGTT+TGG - chr5_2:47121284-47121303 None:intergenic 25.0%
!! ATTCATTTGGAACATATTGA+TGG - chr5_2:47121345-47121364 None:intergenic 25.0%
! GTTCCAAATGAATAAAGTAT+TGG + chr5_2:47121352-47121371 Msa0772770:CDS 25.0%
! TTGCCAATACTTTATTCATT+TGG - chr5_2:47121358-47121377 None:intergenic 25.0%
!! GTTATTTCAAAACAAGACAT+TGG + chr5_2:47121449-47121468 Msa0772770:intron 25.0%
! GGAATTTAAAAAAGGATTAG+GGG - chr5_2:47121521-47121540 None:intergenic 25.0%
! GAGGAATTTAAAAAAGGATT+AGG - chr5_2:47121523-47121542 None:intergenic 25.0%
!!! TTGTCAAAGTAATTGCTTTT+TGG + chr5_2:47121612-47121631 Msa0772770:intron 25.0%
! GATGGTATGGTTAATTAATT+TGG + chr5_2:47121904-47121923 Msa0772770:intron 25.0%
! ATCATTTCAAACACAATTAC+TGG + chr5_2:47121994-47122013 Msa0772770:intron 25.0%
! AAATTACAAATGTGTACCAT+AGG - chr5_2:47122038-47122057 None:intergenic 25.0%
! AGCAACATGGTATAAATAAA+TGG - chr5_2:47122097-47122116 None:intergenic 25.0%
! CCTTACTTATATAACAGATT+CGG + chr5_2:47122128-47122147 Msa0772770:intron 25.0%
! TGATGTCATTAAAAGAATGT+GGG + chr5_2:47122269-47122288 Msa0772770:CDS 25.0%
! AGAATGTGGGATTATATAAA+AGG + chr5_2:47122282-47122301 Msa0772770:CDS 25.0%
! ATTTAAGCAATATATATGGC+TGG - chr5_2:47122346-47122365 None:intergenic 25.0%
!! TTGCTTAAATAAAGCTTTGA+TGG + chr5_2:47122356-47122375 Msa0772770:intron 25.0%
! TCTTATGTTCAACAAATAAG+AGG - chr5_2:47122638-47122657 None:intergenic 25.0%
! TTTCTTTGGTCAATTGTTAT+CGG + chr5_2:47122740-47122759 Msa0772770:intron 25.0%
!! TTGGTGATTAACAAATTCAT+TGG - chr5_2:47122811-47122830 None:intergenic 25.0%
! ATGCTGAAAAGATACATAAA+CGG - chr5_2:47123155-47123174 None:intergenic 25.0%
! AATGAATTGTCAGTAGAAAA+TGG - chr5_2:47123348-47123367 None:intergenic 25.0%
!!! AGTGTTGATATTAATACATG+AGG + chr5_2:47123371-47123390 Msa0772770:three_prime_UTR 25.0%
! TGAAGAAGATGATGATAATG+AGG + chr5_2:47119285-47119304 Msa0772770:CDS 30.0%
AAAATGTGATTGACGATATC+CGG + chr5_2:47119512-47119531 Msa0772770:intron 30.0%
GATTTCTCCTTATAGATTCT+TGG + chr5_2:47119598-47119617 Msa0772770:intron 30.0%
ATGATGATAACATAAGCACA+TGG + chr5_2:47119744-47119763 Msa0772770:intron 30.0%
TGATGATAACATAAGCACAT+GGG + chr5_2:47119745-47119764 Msa0772770:intron 30.0%
! CGTTTACTCTTTTTGTTCAT+TGG + chr5_2:47119796-47119815 Msa0772770:intron 30.0%
! TTACTCTTTTTGTTCATTGG+TGG + chr5_2:47119799-47119818 Msa0772770:intron 30.0%
TACAATCTTAACAAATGTCG+AGG - chr5_2:47120050-47120069 None:intergenic 30.0%
ATACACACTAAACTACTTGT+TGG + chr5_2:47120085-47120104 Msa0772770:intron 30.0%
GCAGAGTGATAAATAAGTAT+AGG - chr5_2:47120124-47120143 None:intergenic 30.0%
TTCAACAGTTTCAAAAAGGA+GGG - chr5_2:47120217-47120236 None:intergenic 30.0%
ATTCAACAGTTTCAAAAAGG+AGG - chr5_2:47120218-47120237 None:intergenic 30.0%
CACATTCAACAGTTTCAAAA+AGG - chr5_2:47120221-47120240 None:intergenic 30.0%
AAAGTTTCCAAGGAAATTCT+TGG - chr5_2:47120351-47120370 None:intergenic 30.0%
ATTGTGATCAAAAGTTTCCA+AGG - chr5_2:47120361-47120380 None:intergenic 30.0%
AATCCAGTTTACTTAACAAG+TGG + chr5_2:47120393-47120412 Msa0772770:intron 30.0%
! TAACCACTTGTTAAGTAAAC+TGG - chr5_2:47120399-47120418 None:intergenic 30.0%
TTACTTAACAAGTGGTTAGT+CGG + chr5_2:47120401-47120420 Msa0772770:intron 30.0%
TGGAGTTCAACAAGTTAAAA+AGG - chr5_2:47120522-47120541 None:intergenic 30.0%
! GTTTATTTATTGTTTGGAGC+AGG - chr5_2:47120559-47120578 None:intergenic 30.0%
!! GTAAATATTTCTTTTGGAGG+AGG + chr5_2:47120894-47120913 Msa0772770:intron 30.0%
GATGAGGTAGTAAAGAAAAA+AGG + chr5_2:47120974-47120993 Msa0772770:CDS 30.0%
AAAAAATTATACCTCAGTCC+TGG - chr5_2:47121071-47121090 None:intergenic 30.0%
! TTAGGTTGTTAAGCAATTGT+GGG + chr5_2:47121229-47121248 Msa0772770:intron 30.0%
!!! ATCCTTTTTTAAATTCCTCC+AGG + chr5_2:47121524-47121543 Msa0772770:intron 30.0%
AATTATATCACGCTTAGAAG+AGG - chr5_2:47121640-47121659 None:intergenic 30.0%
ATCTCTTGATATAGTTATCC+AGG + chr5_2:47121798-47121817 Msa0772770:intron 30.0%
AACTTATAATATGCAGGAAG+AGG - chr5_2:47121960-47121979 None:intergenic 30.0%
ATGTGGAACTTATAATATGC+AGG - chr5_2:47121966-47121985 None:intergenic 30.0%
TCATTCGTAAACATGAATAC+AGG - chr5_2:47122068-47122087 None:intergenic 30.0%
CCGAATCTGTTATATAAGTA+AGG - chr5_2:47122131-47122150 None:intergenic 30.0%
! TTGATAATTCACTTTCTCCA+AGG - chr5_2:47122245-47122264 None:intergenic 30.0%
CTGATGTCATTAAAAGAATG+TGG + chr5_2:47122268-47122287 Msa0772770:CDS 30.0%
TATAAAAGGAAACAACCTTC+AGG + chr5_2:47122296-47122315 Msa0772770:CDS 30.0%
TGTTCAACAAATAAGAGGAT+TGG - chr5_2:47122633-47122652 None:intergenic 30.0%
TGTTGTTCAGATTCTTTCTT+TGG + chr5_2:47122726-47122745 Msa0772770:intron 30.0%
CTCTGTGATAAGGAAAAAAA+TGG - chr5_2:47122771-47122790 None:intergenic 30.0%
! AGAATTTTCCATGCTAATCA+GGG - chr5_2:47122838-47122857 None:intergenic 30.0%
! TAGAATTTTCCATGCTAATC+AGG - chr5_2:47122839-47122858 None:intergenic 30.0%
!! TTTTATTGACTGCTTTGTGA+AGG + chr5_2:47122923-47122942 Msa0772770:intron 30.0%
! AATATTTGCCTCTTGTTTGA+AGG - chr5_2:47122951-47122970 None:intergenic 30.0%
! GTTTATGTATCTTTTCAGCA+TGG + chr5_2:47123154-47123173 Msa0772770:three_prime_UTR 30.0%
! TTTTAACATGTTTTGCCACT+TGG + chr5_2:47123266-47123285 Msa0772770:three_prime_UTR 30.0%
AACATTATCCTTGCATATTC+AGG - chr5_2:47123321-47123340 None:intergenic 30.0%
CCTAATTCCTTAACGAGAAA+CGG + chr5_2:47118909-47118928 Msa0772770:five_prime_UTR 35.0%
CTAATTCCTTAACGAGAAAC+GGG + chr5_2:47118910-47118929 Msa0772770:five_prime_UTR 35.0%
TGGAAATGAATGAACGAGTT+GGG - chr5_2:47119005-47119024 None:intergenic 35.0%
TTGGAAATGAATGAACGAGT+TGG - chr5_2:47119006-47119025 None:intergenic 35.0%
CGTTCATTCATTTCCAAACA+TGG + chr5_2:47119009-47119028 Msa0772770:exon 35.0%
GGATAAATCGATACCGAAAT+CGG - chr5_2:47119131-47119150 None:intergenic 35.0%
TCGAATGAAAGACTTCCTAT+CGG - chr5_2:47119152-47119171 None:intergenic 35.0%
ATCAGCATCTTCTTCTTCTA+CGG - chr5_2:47119233-47119252 None:intergenic 35.0%
CGAAGAACAAGAAGAAAGAA+CGG + chr5_2:47119350-47119369 Msa0772770:CDS 35.0%
CAAATGGCCAAGAATCTATA+AGG - chr5_2:47119608-47119627 None:intergenic 35.0%
TGCAATTGATCGATTGCAAA+TGG - chr5_2:47119624-47119643 None:intergenic 35.0%
!!! ACATGGGTTTGTTTTGTGAT+TGG + chr5_2:47119761-47119780 Msa0772770:intron 35.0%
!!! CATGGGTTTGTTTTGTGATT+GGG + chr5_2:47119762-47119781 Msa0772770:intron 35.0%
!!! ATGGGTTTGTTTTGTGATTG+GGG + chr5_2:47119763-47119782 Msa0772770:intron 35.0%
AAAAAGAGTAAACGTCCTAG+TGG - chr5_2:47119790-47119809 None:intergenic 35.0%
!!! TGCTTTTGAAGTTAGTGATG+TGG + chr5_2:47119840-47119859 Msa0772770:intron 35.0%
TGTATCTATTCGACAATGCT+GGG + chr5_2:47120163-47120182 Msa0772770:intron 35.0%
TCAACAGTTTCAAAAAGGAG+GGG - chr5_2:47120216-47120235 None:intergenic 35.0%
TGAAACTGTTGAATGTGAAG+TGG + chr5_2:47120224-47120243 Msa0772770:intron 35.0%
TGTGTTTCCAAGAATTTCCT+TGG + chr5_2:47120341-47120360 Msa0772770:intron 35.0%
GGTTTAGCTAATCATTGCTA+TGG + chr5_2:47120422-47120441 Msa0772770:intron 35.0%
CAAGTTAAAAAGGCCAAATG+TGG - chr5_2:47120512-47120531 None:intergenic 35.0%
! TGATCTCCCAATATTTTGCA+AGG + chr5_2:47120631-47120650 Msa0772770:intron 35.0%
AACAGTCGCTGTTAAAATGA+GGG - chr5_2:47120922-47120941 None:intergenic 35.0%
AAACAGTCGCTGTTAAAATG+AGG - chr5_2:47120923-47120942 None:intergenic 35.0%
TACTTCAGATCTAACAAGTC+AGG + chr5_2:47120950-47120969 Msa0772770:intron 35.0%
GAGGTAGTAAAGAAAAAAGG+CGG + chr5_2:47120977-47120996 Msa0772770:CDS 35.0%
CATCCTATCTCTACAAAAGA+GGG - chr5_2:47121109-47121128 None:intergenic 35.0%
!! GTTTGGTGTAATTCTGTATC+TGG + chr5_2:47121177-47121196 Msa0772770:intron 35.0%
!! TTGTTTGTTATGGTGACCTT+AGG + chr5_2:47121211-47121230 Msa0772770:intron 35.0%
CACAATTGCTTAACAACCTA+AGG - chr5_2:47121230-47121249 None:intergenic 35.0%
! CTTAGGTTGTTAAGCAATTG+TGG + chr5_2:47121228-47121247 Msa0772770:intron 35.0%
ATTTGCAAGACCCAAACAAT+AGG + chr5_2:47121270-47121289 Msa0772770:CDS 35.0%
!! AAGTATTGGCAAAGCATATC+TGG + chr5_2:47121366-47121385 Msa0772770:CDS 35.0%
ATACCATCATCTGAATCCAA+TGG - chr5_2:47121392-47121411 None:intergenic 35.0%
! AATAGTAAGAAGGAAGCGTA+AGG - chr5_2:47121425-47121444 None:intergenic 35.0%
CACCTGGAGGAATTTAAAAA+AGG - chr5_2:47121529-47121548 None:intergenic 35.0%
!!! CTTTTTTAAATTCCTCCAGG+TGG + chr5_2:47121527-47121546 Msa0772770:intron 35.0%
TATAGTTATCCAGGTGAAGT+CGG + chr5_2:47121807-47121826 Msa0772770:intron 35.0%
TAGAGCAATAACAAACCTGA+AGG - chr5_2:47122314-47122333 None:intergenic 35.0%
TAAGCAATATATATGGCTGG+AGG - chr5_2:47122343-47122362 None:intergenic 35.0%
GGGTAAAGATGTAACTTTCA+TGG + chr5_2:47122479-47122498 Msa0772770:intron 35.0%
AACAGAAAAATGGGAAAGAG+TGG - chr5_2:47122558-47122577 None:intergenic 35.0%
ACAACATAAAATGCACACGT+TGG + chr5_2:47122578-47122597 Msa0772770:intron 35.0%
!! ATAAGAGGATTGGTTGAGTT+AGG - chr5_2:47122623-47122642 None:intergenic 35.0%
AAGTGTACAACTCTGTGATA+AGG - chr5_2:47122781-47122800 None:intergenic 35.0%
! GAATTTTCCATGCTAATCAG+GGG - chr5_2:47122837-47122856 None:intergenic 35.0%
CTTTACTGTTACAAAACTGC+TGG + chr5_2:47123019-47123038 Msa0772770:CDS 35.0%
TGCTCTGTCTTTATGAAATG+AGG - chr5_2:47123047-47123066 None:intergenic 35.0%
! CTTTAGTTCCTGAATATGCA+AGG + chr5_2:47123310-47123329 Msa0772770:three_prime_UTR 35.0%
CCGTTTCTCGTTAAGGAATT+AGG - chr5_2:47118912-47118931 None:intergenic 40.0%
TTTCAATCTGTGTCCCTAGT+TGG + chr5_2:47118941-47118960 Msa0772770:five_prime_UTR 40.0%
TTCAATCTGTGTCCCTAGTT+GGG + chr5_2:47118942-47118961 Msa0772770:five_prime_UTR 40.0%
! GAAGATTTTTGCCCCAACTA+GGG - chr5_2:47118957-47118976 None:intergenic 40.0%
! AGAAGATTTTTGCCCCAACT+AGG - chr5_2:47118958-47118977 None:intergenic 40.0%
TCCAAACATGGTATCCGAAT+CGG + chr5_2:47119021-47119040 Msa0772770:exon 40.0%
CGAAATCGGATTCTAACTGA+CGG - chr5_2:47119117-47119136 None:intergenic 40.0%
CGTCAGTTAGAATCCGATTT+CGG + chr5_2:47119115-47119134 Msa0772770:CDS 40.0%
!! TCGGTATCGATTTATCCGAT+AGG + chr5_2:47119134-47119153 Msa0772770:CDS 40.0%
GAAGTCTTTCATTCGAGAAC+AGG + chr5_2:47119156-47119175 Msa0772770:CDS 40.0%
! CGTCTTGTTGAATGGTTTGA+AGG - chr5_2:47119192-47119211 None:intergenic 40.0%
! TGGTTCATCGTCTTGTTGAA+TGG - chr5_2:47119200-47119219 None:intergenic 40.0%
AAACCAGAACAAAGCCAAGA+AGG + chr5_2:47119256-47119275 Msa0772770:CDS 40.0%
TTTGCTGATGTAAACCTGCA+AGG - chr5_2:47119873-47119892 None:intergenic 40.0%
!!! TCTTGTTTTACTTGCCTTGC+AGG + chr5_2:47119928-47119947 Msa0772770:intron 40.0%
TTTGCTGATGTAAACCTGCA+AGG - chr5_2:47119873-47119892 None:intergenic 40.0%
GTGTATCTATTCGACAATGC+TGG + chr5_2:47120162-47120181 Msa0772770:intron 40.0%
CAACAGTTTCAAAAAGGAGG+GGG - chr5_2:47120215-47120234 None:intergenic 40.0%
! GTTCGCCAAATTTTCTGCAT+CGG - chr5_2:47120278-47120297 None:intergenic 40.0%
CAGGAGAAATGTTCCACATT+TGG + chr5_2:47120496-47120515 Msa0772770:intron 40.0%
AGCAGGGAAGGAATTTAACT+TGG - chr5_2:47120542-47120561 None:intergenic 40.0%
! TTTATTGTTTGGAGCAGGGA+AGG - chr5_2:47120554-47120573 None:intergenic 40.0%
GCAAGGCAAATATGTTCTGA+AGG + chr5_2:47120648-47120667 Msa0772770:intron 40.0%
CAGAAAGATTGCAGTCTTCT+TGG + chr5_2:47120714-47120733 Msa0772770:intron 40.0%
AACTGATAACTTGACATGGG+AGG + chr5_2:47120747-47120766 Msa0772770:intron 40.0%
ATCTAACAAGTCAGGTGATG+AGG + chr5_2:47120958-47120977 Msa0772770:CDS 40.0%
GTAGTAAAGAAAAAAGGCGG+CGG + chr5_2:47120980-47120999 Msa0772770:CDS 40.0%
GCATCCTATCTCTACAAAAG+AGG - chr5_2:47121110-47121129 None:intergenic 40.0%
!! TAATTCTGTATCTGGCCTTG+CGG + chr5_2:47121185-47121204 Msa0772770:intron 40.0%
CATAACAAACAAATGCCGCA+AGG - chr5_2:47121203-47121222 None:intergenic 40.0%
! CTTGCGGCATTTGTTTGTTA+TGG + chr5_2:47121201-47121220 Msa0772770:intron 40.0%
AGCAATTGTGGGCCTATATT+AGG + chr5_2:47121240-47121259 Msa0772770:CDS 40.0%
GCAATTGTGGGCCTATATTA+GGG + chr5_2:47121241-47121260 Msa0772770:CDS 40.0%
! GATGGTGTCAACACCAAAAA+GGG - chr5_2:47121327-47121346 None:intergenic 40.0%
! TGATGGTGTCAACACCAAAA+AGG - chr5_2:47121328-47121347 None:intergenic 40.0%
! GTGGTCCTCATGTGATTTTA+GGG + chr5_2:47121546-47121565 Msa0772770:intron 40.0%
! TGGTCCTCATGTGATTTTAG+GGG + chr5_2:47121547-47121566 Msa0772770:intron 40.0%
AGAACCCCTAAAATCACATG+AGG - chr5_2:47121554-47121573 None:intergenic 40.0%
AAACAAGAGAGAGACGATGA+TGG + chr5_2:47121886-47121905 Msa0772770:CDS 40.0%
GGTATTAGACACAAGCAACA+TGG - chr5_2:47122110-47122129 None:intergenic 40.0%
AGCCGAAAGGAAAGGAAAAA+CGG + chr5_2:47122154-47122173 Msa0772770:CDS 40.0%
!!! TGCCGTTTTTCCTTTCCTTT+CGG - chr5_2:47122159-47122178 None:intergenic 40.0%
AAGGAAAAACGGCAGAAAGT+AGG + chr5_2:47122165-47122184 Msa0772770:CDS 40.0%
CAGAAAGTAGGATCAGGAAA+AGG + chr5_2:47122177-47122196 Msa0772770:CDS 40.0%
! TGATGGTTTGTGTACGTTAG+TGG + chr5_2:47122373-47122392 Msa0772770:intron 40.0%
GAAAAATGGGAAAGAGTGGA+GGG - chr5_2:47122554-47122573 None:intergenic 40.0%
AGAAAAATGGGAAAGAGTGG+AGG - chr5_2:47122555-47122574 None:intergenic 40.0%
TGAAGGATCCTTCAAACAAG+AGG + chr5_2:47122940-47122959 Msa0772770:intron 40.0%
!! TTTGATGTTGACTCCTTCGT+TGG + chr5_2:47122996-47123015 Msa0772770:CDS 40.0%
TGTAACAGTAAAGCCAACGA+AGG - chr5_2:47123012-47123031 None:intergenic 40.0%
GTTGCTTGCACATTGTTATG+CGG + chr5_2:47123071-47123090 Msa0772770:three_prime_UTR 40.0%
ATTGTTATGCGGCTATGCAT+GGG + chr5_2:47123082-47123101 Msa0772770:three_prime_UTR 40.0%
CAAAACTTTCCACTACCAAG+TGG - chr5_2:47123284-47123303 None:intergenic 40.0%
AGTAAGCATCATGACTCAGT+CGG + chr5_2:47123399-47123418 Msa0772770:three_prime_UTR 40.0%
! TTTTCGCCCGTTTCTCGTTA+AGG - chr5_2:47118919-47118938 None:intergenic 45.0%
TCAATCTGTGTCCCTAGTTG+GGG + chr5_2:47118943-47118962 Msa0772770:five_prime_UTR 45.0%
!! TCCGATTCGGATACCATGTT+TGG - chr5_2:47119025-47119044 None:intergenic 45.0%
AATCGGATTCTAACTGACGG+CGG - chr5_2:47119114-47119133 None:intergenic 45.0%
!! GAACCTTCTTGGCTTTGTTC+TGG - chr5_2:47119262-47119281 None:intergenic 45.0%
CTTCTTCATCGGAACCTTCT+TGG - chr5_2:47119273-47119292 None:intergenic 45.0%
!! CGTCTTTTTCACACTACCTC+TGG - chr5_2:47119332-47119351 None:intergenic 45.0%
! TTTTGTGATTGGGGTCCACT+AGG + chr5_2:47119772-47119791 Msa0772770:intron 45.0%
! TTTCAAAAAGGAGGGGGTAC+GGG - chr5_2:47120209-47120228 None:intergenic 45.0%
GTTTCAAAAAGGAGGGGGTA+CGG - chr5_2:47120210-47120229 None:intergenic 45.0%
CTCCACCGATGCAGAAAATT+TGG + chr5_2:47120270-47120289 Msa0772770:intron 45.0%
AATTTGGCGAACCACAGTTG+AGG + chr5_2:47120286-47120305 Msa0772770:intron 45.0%
! TTTTGCTCAAGCCTCAACTG+TGG - chr5_2:47120300-47120319 None:intergenic 45.0%
CCAACGAATTCCTGAAGTTG+CGG - chr5_2:47121034-47121053 None:intergenic 45.0%
CCTATCTCTACAAAAGAGGG+TGG - chr5_2:47121106-47121125 None:intergenic 45.0%
! CCACCCTCTTTTGTAGAGAT+AGG + chr5_2:47121103-47121122 Msa0772770:intron 45.0%
TGGCCATTGGATTCAGATGA+TGG + chr5_2:47121386-47121405 Msa0772770:CDS 45.0%
! AGAAGGAAGCGTAAGGTTGT+AGG - chr5_2:47121418-47121437 None:intergenic 45.0%
AAAATCACATGAGGACCACC+TGG - chr5_2:47121545-47121564 None:intergenic 45.0%
! GGTGGTCCTCATGTGATTTT+AGG + chr5_2:47121545-47121564 Msa0772770:intron 45.0%
! TTTCGTGCAGGCTTTTCCTT+TGG - chr5_2:47121853-47121872 None:intergenic 45.0%
AAAGGAAAAGCCTGCACGAA+AGG + chr5_2:47121852-47121871 Msa0772770:CDS 45.0%
!! TTCTGCTTTTCCTTTCGTGC+AGG - chr5_2:47121865-47121884 None:intergenic 45.0%
! AGAGAGAGACGATGATGGTA+TGG + chr5_2:47121891-47121910 Msa0772770:intron 45.0%
AAACGGCAGAAAGTAGGATC+AGG + chr5_2:47122171-47122190 Msa0772770:CDS 45.0%
TTCTCCAAGGAACTTCGCAA+GGG - chr5_2:47122232-47122251 None:intergenic 45.0%
TTTCTCCAAGGAACTTCGCA+AGG - chr5_2:47122233-47122252 None:intergenic 45.0%
AGCTGCAGTGCAATTGGTAA+GGG + chr5_2:47122451-47122470 Msa0772770:intron 45.0%
!! GCACACGTTGGTTTCATGTT+AGG + chr5_2:47122590-47122609 Msa0772770:intron 45.0%
CATTGTTATGCGGCTATGCA+TGG + chr5_2:47123081-47123100 Msa0772770:three_prime_UTR 45.0%
TTTCAGCATGGTCTGCAAAC+TGG + chr5_2:47123166-47123185 Msa0772770:three_prime_UTR 45.0%
!! CATGTTTTGCCACTTGGTAG+TGG + chr5_2:47123272-47123291 Msa0772770:three_prime_UTR 45.0%
!! AAAATCAAAAAATTAAAATT+AGG - chr5_2:47119653-47119672 None:intergenic 5.0%
! TGGTGTTGAGGTCGGAGTTA+CGG - chr5_2:47119075-47119094 None:intergenic 50.0%
!! TCTTCTACGGCGTCGTTTTG+TGG - chr5_2:47119220-47119239 None:intergenic 50.0%
! ATTGACGATATCCGGCTCGA+GGG + chr5_2:47119520-47119539 Msa0772770:intron 50.0%
CAAAGACTAAACCCTCGAGC+CGG - chr5_2:47119534-47119553 None:intergenic 50.0%
GATGTGGTTACTTGCCTTGC+AGG + chr5_2:47119856-47119875 Msa0772770:intron 50.0%
! TTCAAAAAGGAGGGGGTACG+GGG - chr5_2:47120208-47120227 None:intergenic 50.0%
! CGCCAAATTTTCTGCATCGG+TGG - chr5_2:47120275-47120294 None:intergenic 50.0%
GCACTTGCATGATTGCTTGC+AGG + chr5_2:47120477-47120496 Msa0772770:intron 50.0%
GTAAAGAAAAAAGGCGGCGG+CGG + chr5_2:47120983-47121002 Msa0772770:CDS 50.0%
ATTCCTGAAGTTGCGGAGAC+AGG - chr5_2:47121027-47121046 None:intergenic 50.0%
CCGCAACTTCAGGAATTCGT+TGG + chr5_2:47121031-47121050 Msa0772770:CDS 50.0%
! ATTCGTTGGAGCACCAGAGA+TGG + chr5_2:47121045-47121064 Msa0772770:CDS 50.0%
GGCAAAGCATATCTGGCCAT+TGG + chr5_2:47121373-47121392 Msa0772770:CDS 50.0%
!!! TTTGGTGCCGGCTTTTCCTT+TGG - chr5_2:47121835-47121854 None:intergenic 50.0%
AAAGGAAAAGCCGGCACCAA+AGG + chr5_2:47121834-47121853 Msa0772770:CDS 50.0%
ACAGATTCGGATGAGCCGAA+AGG + chr5_2:47122141-47122160 Msa0772770:intron 50.0%
TTCGGATGAGCCGAAAGGAA+AGG + chr5_2:47122146-47122165 Msa0772770:CDS 50.0%
AGGGCTTCAGATAGCTGAAG+TGG - chr5_2:47122213-47122232 None:intergenic 50.0%
GTACTCAGCTGCAGTGCAAT+TGG + chr5_2:47122445-47122464 Msa0772770:intron 50.0%
CAGCTGCAGTGCAATTGGTA+AGG + chr5_2:47122450-47122469 Msa0772770:intron 50.0%
TGCAGTGCAATTGGTAAGGG+TGG + chr5_2:47122454-47122473 Msa0772770:intron 50.0%
AGTGCAATTGGTAAGGGTGG+AGG + chr5_2:47122457-47122476 Msa0772770:intron 50.0%
GTGCAATTGGTAAGGGTGGA+GGG + chr5_2:47122458-47122477 Msa0772770:intron 50.0%
TGCAATTGGTAAGGGTGGAG+GGG + chr5_2:47122459-47122478 Msa0772770:intron 50.0%
CCATGCTAATCAGGGGAAGT+TGG - chr5_2:47122830-47122849 None:intergenic 50.0%
CCAACTTCCCCTGATTAGCA+TGG + chr5_2:47122827-47122846 Msa0772770:intron 50.0%
GGTCTGCAAACTGGAGGAAT+AGG + chr5_2:47123175-47123194 Msa0772770:three_prime_UTR 50.0%
! AGGACATTAGGGGCACGTGT+GGG + chr5_2:47118866-47118885 Msa0772770:five_prime_UTR 55.0%
GCGGTCGATGAGTTCCGATT+CGG - chr5_2:47119038-47119057 None:intergenic 55.0%
AGTTACGGAGGAACTCACGG+AGG - chr5_2:47119060-47119079 None:intergenic 55.0%
CGGAGTTACGGAGGAACTCA+CGG - chr5_2:47119063-47119082 None:intergenic 55.0%
TGTTGAGGTCGGAGTTACGG+AGG - chr5_2:47119072-47119091 None:intergenic 55.0%
! GGTAGTGGTGGTGTTGAGGT+CGG - chr5_2:47119083-47119102 None:intergenic 55.0%
! TGGAGGTAGTGGTGGTGTTG+AGG - chr5_2:47119087-47119106 None:intergenic 55.0%
GGATTCTAACTGACGGCGGA+CGG - chr5_2:47119110-47119129 None:intergenic 55.0%
GAAAAACCGAAGCGTGCCAG+AGG + chr5_2:47119313-47119332 Msa0772770:CDS 55.0%
ACACTACCTCTGGCACGCTT+CGG - chr5_2:47119322-47119341 None:intergenic 55.0%
! GATTGACGATATCCGGCTCG+AGG + chr5_2:47119519-47119538 Msa0772770:intron 55.0%
TAGCCTGTCTCCGCAACTTC+AGG + chr5_2:47121021-47121040 Msa0772770:CDS 55.0%
! ACACCAAAAAGGGCACGCAG+CGG - chr5_2:47121317-47121336 None:intergenic 55.0%
ATCACATGAGGACCACCTGG+AGG - chr5_2:47121542-47121561 None:intergenic 55.0%
GTCGGCACCAAAGGAAAAGC+CGG + chr5_2:47121825-47121844 Msa0772770:CDS 55.0%
!! GCAGGCTTTTCCTTTGGTGC+CGG - chr5_2:47121847-47121866 None:intergenic 55.0%
TGCAGGAAGAGGCTGTGATC+AGG - chr5_2:47121949-47121968 None:intergenic 55.0%
GAAGCCCTTGCGAAGTTCCT+TGG + chr5_2:47122225-47122244 Msa0772770:CDS 55.0%
CAGCATGGTCTGCAAACTGG+AGG + chr5_2:47123169-47123188 Msa0772770:three_prime_UTR 55.0%
! GAGGACATTAGGGGCACGTG+TGG + chr5_2:47118865-47118884 Msa0772770:five_prime_UTR 60.0%
! GGACATTAGGGGCACGTGTG+GGG + chr5_2:47118867-47118886 Msa0772770:five_prime_UTR 60.0%
! GACATTAGGGGCACGTGTGG+GGG + chr5_2:47118868-47118887 Msa0772770:five_prime_UTR 60.0%
TACGGAGGAACTCACGGAGG+CGG - chr5_2:47119057-47119076 None:intergenic 60.0%
TTCTAACTGACGGCGGACGG+TGG - chr5_2:47119107-47119126 None:intergenic 60.0%
! TTGGAGCACCAGAGATGGCC+AGG + chr5_2:47121050-47121069 Msa0772770:CDS 60.0%
ACCAGAGATGGCCAGGACTG+AGG + chr5_2:47121057-47121076 Msa0772770:CDS 60.0%
ACCTCAGTCCTGGCCATCTC+TGG - chr5_2:47121061-47121080 None:intergenic 60.0%
! GAACCGCTGCGTGCCCTTTT+TGG + chr5_2:47121311-47121330 Msa0772770:CDS 60.0%
!! CCTTTGGTGCCGACTTCACC+TGG - chr5_2:47121819-47121838 None:intergenic 60.0%
CCAGGTGAAGTCGGCACCAA+AGG + chr5_2:47121816-47121835 Msa0772770:CDS 60.0%
TAACTGACGGCGGACGGTGG+AGG - chr5_2:47119104-47119123 None:intergenic 65.0%
! GCGGACGGTGGAGGTAGTGG+TGG - chr5_2:47119095-47119114 None:intergenic 70.0%
ACGGCGGACGGTGGAGGTAG+TGG - chr5_2:47119098-47119117 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 47118861 47123422 47118861 ID=Msa0772770;Name=Msa0772770
chr5_2 mRNA 47118861 47123422 47118861 ID=Msa0772770-mRNA-1;Parent=Msa0772770;Name=Msa0772770-mRNA-1;_AED=0.17;_eAED=0.17;_QI=167|1|1|1|1|1|6|352|344
chr5_2 exon 47118861 47119371 47118861 ID=Msa0772770-mRNA-1:exon:14130;Parent=Msa0772770-mRNA-1
chr5_2 exon 47120958 47121078 47120958 ID=Msa0772770-mRNA-1:exon:14131;Parent=Msa0772770-mRNA-1
chr5_2 exon 47121233 47121407 47121233 ID=Msa0772770-mRNA-1:exon:14132;Parent=Msa0772770-mRNA-1
chr5_2 exon 47121812 47121907 47121812 ID=Msa0772770-mRNA-1:exon:14133;Parent=Msa0772770-mRNA-1
chr5_2 exon 47122145 47122317 47122145 ID=Msa0772770-mRNA-1:exon:14134;Parent=Msa0772770-mRNA-1
chr5_2 exon 47122945 47123422 47122945 ID=Msa0772770-mRNA-1:exon:14135;Parent=Msa0772770-mRNA-1
chr5_2 five_prime_UTR 47118861 47119027 47118861 ID=Msa0772770-mRNA-1:five_prime_utr;Parent=Msa0772770-mRNA-1
chr5_2 CDS 47119028 47119371 47119028 ID=Msa0772770-mRNA-1:cds;Parent=Msa0772770-mRNA-1
chr5_2 CDS 47120958 47121078 47120958 ID=Msa0772770-mRNA-1:cds;Parent=Msa0772770-mRNA-1
chr5_2 CDS 47121233 47121407 47121233 ID=Msa0772770-mRNA-1:cds;Parent=Msa0772770-mRNA-1
chr5_2 CDS 47121812 47121907 47121812 ID=Msa0772770-mRNA-1:cds;Parent=Msa0772770-mRNA-1
chr5_2 CDS 47122145 47122317 47122145 ID=Msa0772770-mRNA-1:cds;Parent=Msa0772770-mRNA-1
chr5_2 CDS 47122945 47123070 47122945 ID=Msa0772770-mRNA-1:cds;Parent=Msa0772770-mRNA-1
chr5_2 three_prime_UTR 47123071 47123422 47123071 ID=Msa0772770-mRNA-1:three_prime_utr;Parent=Msa0772770-mRNA-1
Gene Sequence

>Msa0772770

ATGGTATCCGAATCGGAACTCATCGACCGCCTCCGTGAGTTCCTCCGTAACTCCGACCTCAACACCACCACTACCTCCACCGTCCGCCGTCAGTTAGAATCCGATTTCGGTATCGATTTATCCGATAGGAAGTCTTTCATTCGAGAACAGGTCGACTTGTTCCTTCAAACCATTCAACAAGACGATGAACCACAAAACGACGCCGTAGAAGAAGAAGATGCTGATGATAAACCAGAACAAAGCCAAGAAGGTTCCGATGAAGAAGATGATGATAATGAGGAAGAAGAAAAACCGAAGCGTGCCAGAGGTAGTGTGAAAAAGACGAAGAACAAGAAGAAAGAACGATCTAACAAGTCAGGTGATGAGGTAGTAAAGAAAAAAGGCGGCGGCGGTTTTTGCAAAATATGTAGCCTGTCTCCGCAACTTCAGGAATTCGTTGGAGCACCAGAGATGGCCAGGACTGAGGTTGTTAAGCAATTGTGGGCCTATATTAGGGAGAAAAATTTGCAAGACCCAAACAATAGGAGAAATATCATTTGCGATGAACCGCTGCGTGCCCTTTTTGGTGTTGACACCATCAATATGTTCCAAATGAATAAAGTATTGGCAAAGCATATCTGGCCATTGGATTCAGATGATGTTATCCAGGTGAAGTCGGCACCAAAGGAAAAGCCGGCACCAAAGGAAAAGCCTGCACGAAAGGAAAAGCAGAAGAAACAAGAGAGAGACGATGATGATTCGGATGAGCCGAAAGGAAAGGAAAAACGGCAGAAAGTAGGATCAGGAAAAGGTTTTCTTGCTCCACTTCAGCTATCTGAAGCCCTTGCGAAGTTCCTTGGAGAAAGTGAATTATCAAGATCTGATGTCATTAAAAGAATGTGGGATTATATAAAAGGAAACAACCTTCAGGATCCTTCAAACAAGAGGCAAATATTATGTGATGAAAAGTTGAAAGAACTCTTTGATGTTGACTCCTTCGTTGGCTTTACTGTTACAAAACTGCTGGCACCTCATTTCATAAAGACAGAGCAGTGA
Protein sequence

>Msa0772770

MVSESELIDRLREFLRNSDLNTTTTSTVRRQLESDFGIDLSDRKSFIREQVDLFLQTIQQDDEPQNDAVEEEDADDKPEQSQEGSDEEDDDNEEEEKPKRARGSVKKTKNKKKERSNKSGDEVVKKKGGGGFCKICSLSPQLQEFVGAPEMARTEVVKQLWAYIREKNLQDPNNRRNIICDEPLRALFGVDTINMFQMNKVLAKHIWPLDSDDVIQVKSAPKEKPAPKEKPARKEKQKKQERDDDDSDEPKGKEKRQKVGSGKGFLAPLQLSEALAKFLGESELSRSDVIKRMWDYIKGNNLQDPSNKRQILCDEKLKELFDVDSFVGFTVTKLLAPHFIKTEQ*