AlfalfaGEDB | Msa0782360

M. sativa cultivar zhongmu-4 / Msa0782360

KEGG: K15613
GO: -
PFAM: PF03790.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0782360	XP_003616932.3	98.658	298	0	1	1	294	15	312	0.0	613

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0782360	sp\|P46608\|HSBH1_SOYBN	66.284	261	72	7	45	293	123	379	1.46e-108	322

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0782360	A5Y4H1	98.658	298	0	1	1	294	15	312	0.0	613

TFs/TRs:

Gene ID	Type	Classification
Msa0782360	TF	HB-KNOX

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006980	Msa0782360	0.845286	4.465388e-59	-8.615850e-47
Msa0015710	Msa0782360	0.839554	1.478055e-57	-8.615850e-47
Msa0016120	Msa0782360	0.830017	3.721216e-55	-8.615850e-47
Msa0019600	Msa0782360	0.835929	1.259967e-56	-8.615850e-47
Msa0024550	Msa0782360	0.802574	5.258224e-49	-8.615850e-47
Msa0055450	Msa0782360	0.835651	1.482649e-56	-8.615850e-47
Msa0080990	Msa0782360	0.811648	6.301065e-51	-8.615850e-47
Msa0109880	Msa0782360	0.840143	1.038094e-57	-8.615850e-47
Msa0111750	Msa0782360	0.808260	3.379676e-50	-8.615850e-47
Msa0641250	Msa0782360	0.828751	7.552279e-55	-8.615850e-47
Msa0641360	Msa0782360	0.815318	9.828242e-52	-8.615850e-47
Msa0669840	Msa0782360	0.880715	4.369459e-70	-8.615850e-47
Msa0725860	Msa0782360	0.801873	7.332341e-49	-8.615850e-47
Msa0739580	Msa0782360	0.969140	1.094251e-129	-8.615850e-47
Msa0748000	Msa0782360	0.811367	7.252945e-51	-8.615850e-47
Msa0751890	Msa0782360	0.800343	1.506943e-48	-8.615850e-47
Msa0752840	Msa0782360	0.819549	1.095753e-52	-8.615850e-47
Msa0770290	Msa0782360	0.815827	7.570934e-52	-8.615850e-47
Msa0782230	Msa0782360	0.804944	1.694115e-49	-8.615850e-47
Msa0782360	Msa0819890	0.852838	3.550293e-61	-8.615850e-47
Msa0782360	Msa0828830	0.852207	5.369934e-61	-8.615850e-47
Msa0782360	Msa0831940	0.813665	2.281423e-51	-8.615850e-47
Msa0782360	Msa0849280	0.853467	2.344010e-61	-8.615850e-47
Msa0782360	Msa0851020	0.857827	1.252090e-62	-8.615850e-47
Msa0782360	Msa0860160	0.829162	6.004884e-55	-8.615850e-47
Msa0782360	Msa0860280	0.978657	2.761316e-146	-8.615850e-47
Msa0782360	Msa0867350	0.861408	1.048049e-63	-8.615850e-47
Msa0782360	Msa0898730	0.857545	1.517180e-62	-8.615850e-47
Msa0782360	Msa0911540	0.818004	2.457481e-52	-8.615850e-47
Msa0782360	Msa0929870	0.821264	4.428723e-53	-8.615850e-47
Msa0782360	Msa0941820	0.807262	5.508312e-50	-8.615850e-47
Msa0782360	Msa0944760	0.826916	2.086635e-54	-8.615850e-47
Msa0782360	Msa0944880	0.806255	8.989352e-50	-8.615850e-47
Msa0782360	Msa0961560	0.806013	1.010691e-49	-8.615850e-47
Msa0782360	Msa0964840	0.813293	2.754934e-51	-8.615850e-47
Msa0782360	Msa0967380	0.802445	5.592454e-49	-8.615850e-47
Msa0782360	Msa0999300	0.844243	8.527793e-59	-8.615850e-47
Msa0782360	Msa0999320	0.815670	8.207574e-52	-8.615850e-47
Msa0782360	Msa0999350	0.803796	2.937662e-49	-8.615850e-47
Msa0782360	Msa0999360	0.829858	4.069365e-55	-8.615850e-47
Msa0782360	Msa0999410	0.833292	5.799139e-56	-8.615850e-47
Msa0782360	Msa1001870	0.817001	4.134894e-52	-8.615850e-47
Msa0782360	Msa1001890	0.821050	4.961853e-53	-8.615850e-47
Msa0782360	Msa1010840	0.828483	8.768182e-55	-8.615850e-47
Msa0782360	Msa1037770	0.829251	5.714976e-55	-8.615850e-47
Msa0782360	Msa1037890	0.815552	8.721022e-52	-8.615850e-47
Msa0782360	Msa1037900	0.829364	5.363766e-55	-8.615850e-47
Msa0782360	Msa1037910	0.840080	1.078348e-57	-8.615850e-47
Msa0782360	Msa1047990	0.809095	2.241611e-50	-8.615850e-47
Msa0782360	Msa1052360	0.823129	1.635777e-53	-8.615850e-47
Msa0782360	Msa1081570	0.831910	1.276664e-55	-8.615850e-47
Msa0782360	Msa1084520	0.830669	2.578020e-55	-8.615850e-47
Msa0782360	Msa1092020	0.822358	2.472318e-53	-8.615850e-47
Msa0782360	Msa1096210	0.845416	4.116542e-59	-8.615850e-47
Msa0782360	Msa1127140	0.818026	2.430190e-52	-8.615850e-47
Msa0782360	Msa1129960	0.825523	4.475091e-54	-8.615850e-47
Msa0782360	Msa1129970	0.829695	4.458520e-55	-8.615850e-47
Msa0782360	Msa1130010	0.827002	1.989428e-54	-8.615850e-47
Msa0782360	Msa1135380	0.822280	2.577666e-53	-8.615850e-47
Msa0782360	Msa1140640	0.814567	1.442586e-51	-8.615850e-47
Msa0782360	Msa1145020	0.822684	2.076939e-53	-8.615850e-47
Msa0782360	Msa1166400	0.814883	1.228174e-51	-8.615850e-47
Msa0782360	Msa1171310	0.823892	1.084175e-53	-8.615850e-47
Msa0782360	Msa1176160	0.813396	2.614696e-51	-8.615850e-47
Msa0782360	Msa1179280	0.813726	2.211711e-51	-8.615850e-47
Msa0782360	Msa1200440	0.802598	5.200582e-49	-8.615850e-47
Msa0782360	Msa1201110	0.825407	4.768555e-54	-8.615850e-47
Msa0782360	Msa1201160	0.838891	2.195751e-57	-8.615850e-47
Msa0782360	Msa1228190	0.862513	4.806618e-64	-8.615850e-47
Msa0782360	Msa1233560	0.846115	2.659404e-59	-8.615850e-47
Msa0782360	Msa1271260	0.834971	2.200867e-56	-8.615850e-47
Msa0782360	Msa1275820	0.801273	9.731108e-49	-8.615850e-47
Msa0782360	Msa1277400	0.806057	9.894174e-50	-8.615850e-47
Msa0782360	Msa1294290	0.825512	4.502041e-54	-8.615850e-47
Msa0782360	Msa1305510	0.873049	1.986912e-67	-8.615850e-47
Msa0782360	Msa1307190	0.808136	3.592291e-50	-8.615850e-47
Msa0782360	Msa1313970	0.826923	2.077813e-54	-8.615850e-47
Msa0782360	Msa1316540	0.813677	2.267416e-51	-8.615850e-47
Msa0782360	Msa1356990	0.805929	1.052669e-49	-8.615850e-47
Msa0782360	Msa1374550	0.802868	4.573488e-49	-8.615850e-47
Msa0782360	Msa1378870	0.806826	6.810557e-50	-8.615850e-47
Msa0782360	Msa1379970	0.861902	7.401079e-64	-8.615850e-47
Msa0782360	Msa1394890	0.858411	8.394989e-63	-8.615850e-47
Msa0782360	Msa1406780	0.934956	1.804662e-96	-8.615850e-47
Msa0782360	Msa1421550	0.854975	8.600231e-62	-8.615850e-47
Msa0782360	Msa1423460	0.820874	5.445893e-53	-8.615850e-47
Msa0782360	Msa1431850	0.930430	1.656694e-93	-8.615850e-47
Msa0782360	Msa1449940	0.821124	4.770346e-53	-8.615850e-47
Msa0782360	Msa1455320	0.813195	2.894689e-51	-8.615850e-47
Msa0782360	Msa1459530	0.842873	1.982115e-58	-8.615850e-47
Msa0782360	Msa1461060	0.861961	7.098068e-64	-8.615850e-47
Msa0782360	Msa1462530	0.810177	1.312159e-50	-8.615850e-47
Msa0124130	Msa0782360	0.872004	4.436408e-67	-8.615850e-47
Msa0141120	Msa0782360	0.830105	3.541318e-55	-8.615850e-47
Msa0149140	Msa0782360	0.867020	1.861781e-65	-8.615850e-47
Msa0152500	Msa0782360	0.822789	1.962771e-53	-8.615850e-47
Msa0156250	Msa0782360	0.856334	3.450474e-62	-8.615850e-47
Msa0185490	Msa0782360	0.818216	2.200456e-52	-8.615850e-47
Msa0197100	Msa0782360	0.885779	6.058657e-72	-8.615850e-47
Msa0212080	Msa0782360	0.811919	5.503150e-51	-8.615850e-47
Msa0212150	Msa0782360	0.900534	6.652195e-78	-8.615850e-47
Msa0215640	Msa0782360	0.815403	9.413229e-52	-8.615850e-47
Msa0221290	Msa0782360	0.840392	8.939355e-58	-8.615850e-47
Msa0375680	Msa0782360	0.841334	5.062171e-58	-8.615850e-47
Msa0375700	Msa0782360	0.804508	2.088728e-49	-8.615850e-47
Msa0375890	Msa0782360	0.806447	8.189870e-50	-8.615850e-47
Msa0384910	Msa0782360	0.831635	1.492392e-55	-8.615850e-47
Msa0385390	Msa0782360	0.821720	3.475591e-53	-8.615850e-47
Msa0392420	Msa0782360	0.833708	4.566928e-56	-8.615850e-47
Msa0392460	Msa0782360	0.830527	2.793038e-55	-8.615850e-47
Msa0392490	Msa0782360	0.810355	1.201134e-50	-8.615850e-47
Msa0406000	Msa0782360	0.901012	4.119410e-78	-8.615850e-47
Msa0415320	Msa0782360	0.827558	1.464331e-54	-8.615850e-47
Msa0424330	Msa0782360	0.852539	4.321544e-61	-8.615850e-47
Msa0424340	Msa0782360	0.850019	2.225951e-60	-8.615850e-47
Msa0424350	Msa0782360	0.854538	1.151778e-61	-8.615850e-47
Msa0451400	Msa0782360	0.919743	3.072995e-87	-8.615850e-47
Msa0471240	Msa0782360	0.822002	2.990068e-53	-8.615850e-47
Msa0479540	Msa0782360	0.805537	1.272570e-49	-8.615850e-47
Msa0239030	Msa0782360	0.897874	9.207898e-77	-8.615850e-47
Msa0252630	Msa0782360	0.819057	1.418343e-52	-8.615850e-47
Msa0252770	Msa0782360	0.897012	2.123179e-76	-8.615850e-47
Msa0276740	Msa0782360	0.880000	7.865845e-70	-8.615850e-47
Msa0289920	Msa0782360	0.895695	7.504967e-76	-8.615850e-47
Msa0301580	Msa0782360	0.812516	4.077271e-51	-8.615850e-47
Msa0306120	Msa0782360	0.951573	1.535176e-109	-8.615850e-47
Msa0316680	Msa0782360	0.879936	8.294558e-70	-8.615850e-47
Msa0322840	Msa0782360	0.834000	3.858772e-56	-8.615850e-47
Msa0329620	Msa0782360	0.891780	2.906605e-74	-8.615850e-47
Msa0333450	Msa0782360	0.810876	9.267497e-51	-8.615850e-47
Msa0333700	Msa0782360	0.811054	8.479856e-51	-8.615850e-47
Msa0338970	Msa0782360	0.810081	1.375944e-50	-8.615850e-47
Msa0343660	Msa0782360	0.844526	7.161134e-59	-8.615850e-47
Msa0344570	Msa0782360	0.803588	3.244896e-49	-8.615850e-47
Msa0359250	Msa0782360	0.891512	3.711166e-74	-8.615850e-47
Msa0487570	Msa0782360	0.832013	1.204421e-55	-8.615850e-47
Msa0487630	Msa0782360	0.819806	9.569841e-53	-8.615850e-47
Msa0492190	Msa0782360	0.882252	1.217875e-70	-8.615850e-47
Msa0515950	Msa0782360	0.853574	2.184193e-61	-8.615850e-47
Msa0534930	Msa0782360	0.836962	6.880712e-57	-8.615850e-47
Msa0535040	Msa0782360	0.833613	4.822645e-56	-8.615850e-47
Msa0537920	Msa0782360	0.821454	4.004139e-53	-8.615850e-47
Msa0538220	Msa0782360	0.804917	1.715682e-49	-8.615850e-47
Msa0591790	Msa0782360	0.864043	1.615135e-64	-8.615850e-47
Msa0594090	Msa0782360	0.872307	3.516001e-67	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0782360	MtrunA17_Chr5g0439391	98.658	298	0	1	1	294	1	298	0.0	613
Msa0782360	MtrunA17_Chr2g0289201	64.683	252	78	3	47	288	118	368	3.01e-105	311
Msa0782360	MtrunA17_Chr1g0151961	54.733	243	100	2	40	272	113	355	5.10e-76	236
Msa0782360	MtrunA17_Chr5g0413201	52.016	248	100	5	38	271	64	306	9.21e-76	234
Msa0782360	MtrunA17_Chr1g0192791	47.451	255	105	5	41	274	14	260	1.97e-69	216
Msa0782360	MtrunA17_Chr3g0137241	32.669	251	129	8	47	259	107	355	1.53e-34	128
Msa0782360	MtrunA17_Chr2g0305101	32.114	246	127	5	50	259	98	339	2.54e-34	128
Msa0782360	MtrunA17_Chr1g0149651	32.245	245	132	5	49	259	176	420	1.68e-33	127
Msa0782360	MtrunA17_Chr5g0398181	32.411	253	135	6	43	259	24	276	1.03e-32	122
Msa0782360	MtrunA17_Chr4g0065241	30.189	265	139	7	38	259	54	315	2.12e-31	119
Msa0782360	MtrunA17_Chr8g0373801	39.394	99	53	4	172	265	546	642	1.94e-12	67.8
Msa0782360	MtrunA17_Chr5g0403251	39.362	94	51	3	172	261	494	585	3.79e-12	66.6
Msa0782360	MtrunA17_Chr3g0141941	35.135	111	60	3	157	261	302	406	3.55e-11	63.5
Msa0782360	MtrunA17_Chr8g0387321	37.634	93	56	1	171	261	338	430	6.46e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0782360	AT1G62360.1	65.234	256	75	4	46	288	121	375	7.72e-104	308
Msa0782360	AT4G08150.1	56.962	237	89	3	49	272	137	373	3.77e-75	235
Msa0782360	AT1G23380.1	49.200	250	112	5	36	274	75	320	1.20e-72	226
Msa0782360	AT1G70510.1	48.594	249	111	4	38	274	61	304	4.14e-71	222
Msa0782360	AT1G23380.2	48.810	252	112	6	36	274	75	322	1.06e-70	222
Msa0782360	AT1G70510.2	47.826	253	111	5	38	274	61	308	7.54e-69	216
Msa0782360	AT1G62990.1	30.400	250	141	4	43	259	26	275	7.96e-35	127
Msa0782360	AT5G11060.1	34.800	250	128	9	43	259	120	367	1.90e-34	129
Msa0782360	AT5G25220.2	30.242	248	142	6	43	259	156	403	4.74e-34	128
Msa0782360	AT5G25220.1	30.242	248	142	6	43	259	156	403	6.92e-34	128
Msa0782360	AT4G32040.2	28.216	241	142	4	50	259	122	362	5.31e-30	117
Msa0782360	AT4G32040.1	28.216	241	142	4	50	259	122	362	5.41e-30	117
Msa0782360	AT1G14760.2	34.579	107	61	3	47	148	34	136	9.70e-12	62.0
Msa0782360	AT4G36870.2	33.607	122	72	5	145	261	442	559	1.35e-11	65.5
Msa0782360	AT4G36870.1	33.607	122	72	5	145	261	442	559	1.35e-11	65.5
Msa0782360	AT2G23760.2	37.234	94	53	3	172	261	394	485	2.43e-11	64.7
Msa0782360	AT2G23760.1	37.234	94	53	3	172	261	394	485	2.43e-11	64.7
Msa0782360	AT2G23760.3	37.234	94	53	3	172	261	394	485	2.43e-11	64.7
Msa0782360	AT5G41410.1	40.698	86	43	2	207	286	398	481	8.47e-11	62.8

Find 87 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTCTGCAAGTGCTTGCTTT+TGG	0.251155	5_2:+65331759	None:intergenic
TTGCAGTGAGATTTCTTCTA+TGG	0.262136	5_2:-65335679	Msa0782360:exon
ATGAATCTCACTGCCCTTCT+TGG	0.277420	5_2:+65336296	None:intergenic
TGTTGATCTGCTTCAAATCT+AGG	0.290613	5_2:+65331729	None:intergenic
CGATATATAAACGGTGAAAA+TGG	0.297852	5_2:+65331366	None:intergenic
TGTTGTTGTTGGTGTTGTTC+TGG	0.309721	5_2:+65335550	None:intergenic
GTGTGGGGACTAAGCAAAAT+AGG	0.311837	5_2:-65335845	Msa0782360:intron
GAAATATTGAATGGCTCTTC+AGG	0.317305	5_2:-65335097	Msa0782360:CDS
CCTCTGAGTAACAATTCTTC+TGG	0.333607	5_2:-65335603	Msa0782360:CDS
CTGATAAATATGTAGAGTTC+AGG	0.337698	5_2:+65331426	None:intergenic
CTCTTACCTCAATTGCTTGA+AGG	0.355056	5_2:-65335478	Msa0782360:intron
TGATGAACATGGAAACTAAT+AGG	0.357473	5_2:-65335641	Msa0782360:CDS
TCTAAGCTAGCCACCACTTC+AGG	0.359706	5_2:+65335139	None:intergenic
AAAGTATAATAATCTGTAAA+AGG	0.363764	5_2:+65336012	None:intergenic
TGGGAAAGAGTCAGAAGAAT+AGG	0.366718	5_2:+65335971	None:intergenic
TGTTGTGTTGTGTTAATTGC+AGG	0.368555	5_2:+65336184	None:intergenic
CTTCACCTTGAGTAGTATCT+AGG	0.374756	5_2:+65332776	None:intergenic
TCCAGGTTTGGATCAGTTCA+TGG	0.403203	5_2:-65335038	Msa0782360:intron
TGAAGTGGTGGCTAGCTTAG+AGG	0.404107	5_2:-65335137	Msa0782360:CDS
GAAAAGCATGGCTTCTTTGA+AGG	0.406625	5_2:+65334967	None:intergenic
ATCCCTACAAGTGTTGTTGT+TGG	0.410423	5_2:+65335539	None:intergenic
ACACCAACAACAACACTTGT+AGG	0.415678	5_2:-65335542	Msa0782360:CDS
CGCAAGTATAGTGGATATCT+AGG	0.434219	5_2:-65332727	Msa0782360:CDS
TACTACTCAAGGTGAAGATC+AGG	0.439850	5_2:-65332770	Msa0782360:CDS
AGTTGCTGTCGAGCTTCCTT+TGG	0.440818	5_2:+65332658	None:intergenic
GGCATAGCATCCATAGGAAA+TGG	0.441925	5_2:+65331602	None:intergenic
CTCGACAGCAACTACTTGAT+TGG	0.448986	5_2:-65332648	Msa0782360:CDS
GAAACTATGTTAGGGTTTGG+AGG	0.466056	5_2:-65335708	Msa0782360:intron
GGGAAAGAGTCAGAAGAATA+GGG	0.468134	5_2:+65335972	None:intergenic
CTTCAATTCCGGGAGTACTC+TGG	0.471621	5_2:-65335905	Msa0782360:five_prime_UTR
GGAAGTAGTAGTTCTTGTAT+AGG	0.474614	5_2:-65335067	Msa0782360:intron
AACTACTTGATTGGTGGAGC+AGG	0.476464	5_2:-65332639	Msa0782360:CDS
ATTTGAAGCAGATCAACAAT+TGG	0.483386	5_2:-65331724	Msa0782360:CDS
TCAGGACCTTCAAGCAATTG+AGG	0.486076	5_2:+65335472	None:intergenic
GTAATCTTTAATCTGTAGAA+AGG	0.488229	5_2:-65331473	Msa0782360:three_prime_UTR
GTTGCTGTTTCAACTGACTT+TGG	0.488737	5_2:-65334914	Msa0782360:intron
CAGCTTCTACGCAAGTATAG+TGG	0.489736	5_2:-65332736	Msa0782360:CDS
AAAAGCATGGCTTCTTTGAA+GGG	0.505700	5_2:+65334968	None:intergenic
TTTCATAAACAGTAAAGTGT+GGG	0.507878	5_2:-65335861	Msa0782360:five_prime_UTR
TGATAAATATGTAGAGTTCA+GGG	0.516722	5_2:+65331427	None:intergenic
TAAAATTACCTAGGTTGTGA+AGG	0.521849	5_2:-65331526	Msa0782360:three_prime_UTR
GGATATGCAATTTGCTGTGA+TGG	0.523714	5_2:-65331663	Msa0782360:CDS
GCTGAGACTCAATTCTTGAA+AGG	0.524479	5_2:+65334945	None:intergenic
GGTGGAGCAGGCATTACAAA+TGG	0.526535	5_2:-65332627	Msa0782360:CDS
CACTTGTAGGGATAAAATCA+TGG	0.535342	5_2:-65335529	Msa0782360:CDS
GACAGCAACTACTTGATTGG+TGG	0.536393	5_2:-65332645	Msa0782360:CDS
AGAATAGTTACCGATGGGTA+AGG	0.537725	5_2:+65332604	None:intergenic
CTTCAAGCAATTGAGGTAAG+AGG	0.538407	5_2:+65335479	None:intergenic
AATGGCTCTTCAGGAAGGAC+AGG	0.539828	5_2:-65335088	Msa0782360:CDS
GACAAGAGACGAGGAAAGAG+AGG	0.541929	5_2:+65335501	None:intergenic
ATAATTGTCCAGAGTACTCC+CGG	0.545971	5_2:+65335897	None:intergenic
TGTGTTGTGTTAATTGCAGG+TGG	0.551211	5_2:+65336187	None:intergenic
AAGAATTGAGTCTCAGCTCA+AGG	0.557965	5_2:-65334939	Msa0782360:CDS
GTATAATAATCTGTAAAAGG+TGG	0.560540	5_2:+65336015	None:intergenic
TGTAGAGTTCAGGGATAGTG+TGG	0.560936	5_2:+65331436	None:intergenic
TGTTTGATGTACACAACAGA+AGG	0.567042	5_2:-65336089	Msa0782360:five_prime_UTR
CACCAACAACAACACTTGTA+GGG	0.569598	5_2:-65335541	Msa0782360:CDS
AGTAATTGCGTAGACCAAGA+AGG	0.570221	5_2:-65336310	Msa0782360:five_prime_UTR
GTAATTGCGTAGACCAAGAA+GGG	0.575239	5_2:-65336309	Msa0782360:five_prime_UTR
AATTCTTGAAAGGAAAAGCA+TGG	0.577216	5_2:+65334955	None:intergenic
TTAATGTGCTAAAGAAGCAT+AGG	0.578609	5_2:+65331581	None:intergenic
TTAATCAGAGAAAACGCCAC+TGG	0.580206	5_2:-65331697	Msa0782360:CDS
GGATGCCACAAATTACTACA+TGG	0.582043	5_2:-65331642	Msa0782360:CDS
GATGTGCAAGCCATTTCCTA+TGG	0.586987	5_2:-65331612	Msa0782360:CDS
TTGCAGGTGGAGACAGAGAG+AGG	0.587313	5_2:+65336200	None:intergenic
GGTTGGAGCACCTCCTGAAG+TGG	0.595718	5_2:-65335152	Msa0782360:CDS
TGCAGGTGGAGACAGAGAGA+GGG	0.597322	5_2:+65336201	None:intergenic
CAAGCACTTGCAGAATCCAC+AGG	0.600586	5_2:-65331752	Msa0782360:CDS
GCAAAATGTGAAATATTGAA+TGG	0.601951	5_2:-65335106	Msa0782360:CDS
TCAAAATCAAATGATGAACA+TGG	0.604915	5_2:-65335652	Msa0782360:CDS
TTACAAATGGCCTTACCCAT+CGG	0.606989	5_2:-65332614	Msa0782360:intron
TGGAGCACCTCCTGAAGTGG+TGG	0.608141	5_2:-65335149	Msa0782360:CDS
CTGCTTCAAATCTAGGCCTG+TGG	0.610652	5_2:+65331736	None:intergenic
TATTGAATGGCTCTTCAGGA+AGG	0.613053	5_2:-65335093	Msa0782360:CDS
GCAAATTGCATATCCTCAGA+AGG	0.614720	5_2:+65331671	None:intergenic
TTCATAAACAGTAAAGTGTG+GGG	0.617163	5_2:-65335860	Msa0782360:five_prime_UTR
ACGCCACTGGAAGCCTTCTG+AGG	0.619253	5_2:-65331684	Msa0782360:CDS
ATATTGTACCTTCACAACCT+AGG	0.627623	5_2:+65331518	None:intergenic
AGCATAGGCATAGCATCCAT+AGG	0.634428	5_2:+65331596	None:intergenic
CTTTAATCTGTAGAAAGGTG+AGG	0.636593	5_2:-65331468	Msa0782360:three_prime_UTR
AAAGAATGGAAAGTTACCAA+AGG	0.641055	5_2:-65332674	Msa0782360:CDS
AAGCTAGCCACCACTTCAGG+AGG	0.647427	5_2:+65335142	None:intergenic
AACAACCTAGATACTACTCA+AGG	0.648557	5_2:-65332781	Msa0782360:CDS
CCAGAAGAATTGTTACTCAG+AGG	0.660627	5_2:+65335603	None:intergenic
TATCCTCAGAAGGCTTCCAG+TGG	0.672824	5_2:+65331681	None:intergenic
AGGTAAGAGGACAAGAGACG+AGG	0.679022	5_2:+65335492	None:intergenic
AGGTTTGGATCAGTTCATGG+AGG	0.735955	5_2:-65335035	Msa0782360:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTTTTTTTTTTTTTA+AGG	+	chr5_2:65333950-65333969	None:intergenic	0.0%
!!!	AAATTAATAAATATTTTTTA+AGG	+	chr5_2:65334783-65334802	None:intergenic	0.0%
!!!	TTTTTTTTTTTTTTTTTTTA+AGG	+	chr5_2:65333950-65333969	None:intergenic	0.0%
!!!	GATTTTTTTTTTAAACTTTA+TGG	-	chr5_2:65332459-65332478	Msa0782360:intron	10.0%
!!	ATGAAGATAATATAATTTAA+GGG	+	chr5_2:65332805-65332824	None:intergenic	10.0%
!!	TTCTTTAATTAAATTAAACT+TGG	-	chr5_2:65333678-65333697	Msa0782360:intron	10.0%
!!	ATTATATTGAAATTAACAAA+TGG	+	chr5_2:65334102-65334121	None:intergenic	10.0%
!!!	ATTTTCATTTTCATTTTCAT+TGG	-	chr5_2:65331412-65331431	Msa0782360:three_prime_UTR	15.0%
!!!	TTTTCATTTTCATTTTCATT+GGG	-	chr5_2:65331413-65331432	Msa0782360:three_prime_UTR	15.0%
!!	AAAGTATAATAATCTGTAAA+AGG	+	chr5_2:65331678-65331697	None:intergenic	15.0%
!!	TAGAAAAAACTAAAAAACTT+GGG	+	chr5_2:65331738-65331757	None:intergenic	15.0%
!!	CATGAAGATAATATAATTTA+AGG	+	chr5_2:65332806-65332825	None:intergenic	15.0%
!!!	AAGTAAATATTCATTTTAAC+TGG	-	chr5_2:65332859-65332878	Msa0782360:intron	15.0%
!!	TATTTACTTACGATAAAAAA+GGG	+	chr5_2:65333085-65333104	None:intergenic	15.0%
!!!	AATTAAGTAAAATAAGGTTT+TGG	-	chr5_2:65333223-65333242	Msa0782360:intron	15.0%
!!!	TATAATTTTTTTGCACAAAT+GGG	-	chr5_2:65333425-65333444	Msa0782360:intron	15.0%
!!	TTGTGAAATATTTATGTATT+TGG	+	chr5_2:65334200-65334219	None:intergenic	15.0%
!!!	ATTATTCTTTTATCAAATGT+AGG	-	chr5_2:65334327-65334346	Msa0782360:intron	15.0%
!!!	TTATTCTTTTATCAAATGTA+GGG	-	chr5_2:65334328-65334347	Msa0782360:intron	15.0%
!!!	TTTAGAGTTTTTCATATAAT+AGG	-	chr5_2:65335252-65335271	Msa0782360:intron	15.0%
!!	TTTGTGAATTATTTGTAATT+AGG	-	chr5_2:65335397-65335416	Msa0782360:intron	15.0%
!!	AAACTTTAAATATTGTCATT+AGG	+	chr5_2:65335438-65335457	None:intergenic	15.0%
!!!	ATTTTAGAATTTAAAAGATC+AGG	-	chr5_2:65335705-65335724	Msa0782360:intron	15.0%
!!!	AGGTAATTTTAAAATAGATA+GGG	+	chr5_2:65336152-65336171	None:intergenic	15.0%
!!!	TAGGTAATTTTAAAATAGAT+AGG	+	chr5_2:65336153-65336172	None:intergenic	15.0%
!!!	TATCTATTTTAAAATTACCT+AGG	-	chr5_2:65336152-65336171	Msa0782360:five_prime_UTR	15.0%
!!	GTAGAAAAAACTAAAAAACT+TGG	+	chr5_2:65331739-65331758	None:intergenic	20.0%
!!	ATGCATATGCATTATTATAT+AGG	-	chr5_2:65331903-65331922	Msa0782360:intron	20.0%
!!!	TTTGTTTTGAAACTATGTTA+GGG	-	chr5_2:65331971-65331990	Msa0782360:intron	20.0%
!!!	AATGTTAATAAACTTTTCCA+AGG	+	chr5_2:65332837-65332856	None:intergenic	20.0%
!!!	ATTCTTTTTTTCTCTTTTCT+AGG	+	chr5_2:65332936-65332955	None:intergenic	20.0%
!!	TAGAAAAGAGAAAAAAAGAA+TGG	-	chr5_2:65332935-65332954	Msa0782360:intron	20.0%
!!	CTATTTACTTACGATAAAAA+AGG	+	chr5_2:65333086-65333105	None:intergenic	20.0%
!!!	TTGAAATTGTGTTTTTAACA+TGG	-	chr5_2:65333140-65333159	Msa0782360:intron	20.0%
!!!	TATGTCTAAAGTAATTTACA+TGG	-	chr5_2:65333380-65333399	Msa0782360:intron	20.0%
!!!	GTATAATTTTTTTGCACAAA+TGG	-	chr5_2:65333424-65333443	Msa0782360:intron	20.0%
!!!	TAAATTAAACTTGGTGAAAA+AGG	-	chr5_2:65333687-65333706	Msa0782360:intron	20.0%
!!	AAGTTTAATTCTCAAAACTA+AGG	-	chr5_2:65333763-65333782	Msa0782360:intron	20.0%
!!	ACATAAATATTTCACAACTT+AGG	-	chr5_2:65334203-65334222	Msa0782360:intron	20.0%
!!	CATAAATATTTCACAACTTA+GGG	-	chr5_2:65334204-65334223	Msa0782360:intron	20.0%
!!	ATAAATATTTCACAACTTAG+GGG	-	chr5_2:65334205-65334224	Msa0782360:intron	20.0%
!!	TAAGTGCAATTAGTAATATT+TGG	-	chr5_2:65334496-65334515	Msa0782360:intron	20.0%
!!	AACAATTGCCTATAAAAAAA+GGG	+	chr5_2:65334558-65334577	None:intergenic	20.0%
!!	TAACAATTGCCTATAAAAAA+AGG	+	chr5_2:65334559-65334578	None:intergenic	20.0%
!!	TTAGTTTAGTAAATTGTTAG+AGG	-	chr5_2:65334576-65334595	Msa0782360:intron	20.0%
!!	TAGTTTAGTAAATTGTTAGA+GGG	-	chr5_2:65334577-65334596	Msa0782360:intron	20.0%
!!!	TTTTTGAAGAAGAAAAAGAA+TGG	-	chr5_2:65334999-65335018	Msa0782360:CDS	20.0%
!!!	ATCTTGATTTATAGCATTTT+AGG	-	chr5_2:65335201-65335220	Msa0782360:intron	20.0%
!!!	TTTAGGTTTGATTATTTTGA+AGG	-	chr5_2:65335218-65335237	Msa0782360:intron	20.0%
!!	ATAAATCATTGACATATTCA+AGG	+	chr5_2:65335307-65335326	None:intergenic	20.0%
!!!	GTTTCTGATGTTTTAAATAA+GGG	+	chr5_2:65335601-65335620	None:intergenic	20.0%
!!!	AGTTTCTGATGTTTTAAATA+AGG	+	chr5_2:65335602-65335621	None:intergenic	20.0%
!!!	TACTGATTATTTTAACGTTA+GGG	-	chr5_2:65335626-65335645	Msa0782360:CDS	20.0%
!!	AAATAAATTATCGCAATCAT+AGG	+	chr5_2:65335752-65335771	None:intergenic	20.0%
!!	AATGAAACCTTAATATCAAA+TGG	-	chr5_2:65335852-65335871	Msa0782360:five_prime_UTR	20.0%
!	GTATAATAATCTGTAAAAGG+TGG	+	chr5_2:65331675-65331694	None:intergenic	25.0%
!!!	AGATTTTTTAGCTTCAATTC+CGG	-	chr5_2:65331771-65331790	Msa0782360:intron	25.0%
!!	TTTTCATAAACAGTAAAGTG+TGG	-	chr5_2:65331825-65331844	Msa0782360:intron	25.0%
!	TTTCATAAACAGTAAAGTGT+GGG	-	chr5_2:65331826-65331845	Msa0782360:intron	25.0%
!!!	CTTTGTTTTGAAACTATGTT+AGG	-	chr5_2:65331970-65331989	Msa0782360:intron	25.0%
!	TCAAAATCAAATGATGAACA+TGG	-	chr5_2:65332035-65332054	Msa0782360:intron	25.0%
!!	TCTCAAAAACAAACATTTTG+TGG	+	chr5_2:65332441-65332460	None:intergenic	25.0%
!!!	TTTAAGTGTGATTTTTTTGC+AGG	-	chr5_2:65332514-65332533	Msa0782360:intron	25.0%
!	GCAAAATGTGAAATATTGAA+TGG	-	chr5_2:65332581-65332600	Msa0782360:intron	25.0%
!!	ATAAACTTTTCCAAGGATAA+TGG	+	chr5_2:65332830-65332849	None:intergenic	25.0%
!!	TTCTCTTTTCTAGGTTTTTA+GGG	+	chr5_2:65332927-65332946	None:intergenic	25.0%
!!	TTTCTCTTTTCTAGGTTTTT+AGG	+	chr5_2:65332928-65332947	None:intergenic	25.0%
!!!	TAGTGTGATTAGAGTTTTAA+AGG	-	chr5_2:65333103-65333122	Msa0782360:intron	25.0%
!	AAATGATAGATTACTTCCTA+TGG	-	chr5_2:65333197-65333216	Msa0782360:intron	25.0%
!	AATGATAGATTACTTCCTAT+GGG	-	chr5_2:65333198-65333217	Msa0782360:intron	25.0%
!!	ATTTTACTTAATTTCCCCAT+AGG	+	chr5_2:65333216-65333235	None:intergenic	25.0%
!	TGGGGAAATTAAGTAAAATA+AGG	-	chr5_2:65333217-65333236	Msa0782360:intron	25.0%
!	GGGAATTTGAATAAAAATTG+AGG	+	chr5_2:65333459-65333478	None:intergenic	25.0%
!	AACAAAATTGAACATAACCA+AGG	+	chr5_2:65333545-65333564	None:intergenic	25.0%
!	ATTCCTTAACTTCATTTACA+TGG	-	chr5_2:65333628-65333647	Msa0782360:intron	25.0%
!	ACTTTATAGAGAACGAATTA+AGG	+	chr5_2:65333747-65333766	None:intergenic	25.0%
!!	AGGTAAATTTTTCATTTGCA+TGG	-	chr5_2:65333783-65333802	Msa0782360:intron	25.0%
!	AACTAAACTACTACAAAAGA+GGG	+	chr5_2:65333822-65333841	None:intergenic	25.0%
!	AAACTAAACTACTACAAAAG+AGG	+	chr5_2:65333823-65333842	None:intergenic	25.0%
!	GTTCTTTCCTATCATTAAAT+GGG	+	chr5_2:65334024-65334043	None:intergenic	25.0%
!	AGTTCTTTCCTATCATTAAA+TGG	+	chr5_2:65334025-65334044	None:intergenic	25.0%
!!!	AAATGCTTCATTTTTACACA+TGG	-	chr5_2:65334128-65334147	Msa0782360:intron	25.0%
!!!	AATGCTTCATTTTTACACAT+GGG	-	chr5_2:65334129-65334148	Msa0782360:intron	25.0%
!	TTAAAAGTAAGCTCAAATGA+TGG	-	chr5_2:65334166-65334185	Msa0782360:intron	25.0%
!	TAAGATTCTTAATGAAGAAG+TGG	+	chr5_2:65334266-65334285	None:intergenic	25.0%
!	CTTCTTCATTAAGAATCTTA+TGG	-	chr5_2:65334266-65334285	Msa0782360:intron	25.0%
!	TTTAGTACATTAGTTGTTGT+TGG	-	chr5_2:65334423-65334442	Msa0782360:intron	25.0%
!	ACAATTGCCTATAAAAAAAG+GGG	+	chr5_2:65334557-65334576	None:intergenic	25.0%
!	AGTTTAGTAAATTGTTAGAG+GGG	-	chr5_2:65334578-65334597	Msa0782360:intron	25.0%
!	AAACTAATAAATGTCTAGTC+AGG	+	chr5_2:65334726-65334745	None:intergenic	25.0%
!	TCTTCAAAAACTCTTTCTTA+AGG	+	chr5_2:65334989-65335008	None:intergenic	25.0%
!	TCAATGTTCATAATCATATC+TGG	-	chr5_2:65335174-65335193	Msa0782360:intron	25.0%
!	GAAAAACTCTAAATTGTTCA+GGG	+	chr5_2:65335245-65335264	None:intergenic	25.0%
!	TGAAAAACTCTAAATTGTTC+AGG	+	chr5_2:65335246-65335265	None:intergenic	25.0%
!	TGTAATTAGGTACGAAATTT+AGG	-	chr5_2:65335410-65335429	Msa0782360:intron	25.0%
!!	AAATGTAGTAAGTATTGCAT+TGG	+	chr5_2:65335539-65335558	None:intergenic	25.0%
!!!	CTACTGATTATTTTAACGTT+AGG	-	chr5_2:65335625-65335644	Msa0782360:CDS	25.0%
!	GTATTAGCCATTTGATATTA+AGG	+	chr5_2:65335862-65335881	None:intergenic	25.0%
!!	ATTTTCCATGTAGTAATTTG+TGG	+	chr5_2:65336053-65336072	None:intergenic	25.0%
!	GTAATCTTTAATCTGTAGAA+AGG	-	chr5_2:65336214-65336233	Msa0782360:five_prime_UTR	25.0%
!	TGATAAATATGTAGAGTTCA+GGG	+	chr5_2:65336263-65336282	None:intergenic	25.0%
!	CATTTTCATTTTCATTGGGA+AGG	-	chr5_2:65331417-65331436	Msa0782360:three_prime_UTR	30.0%
!	ACATACTACTCATTTTGCAT+TGG	-	chr5_2:65331637-65331656	Msa0782360:CDS	30.0%
!	TCAGAAGAATAGGGATTTTT+GGG	+	chr5_2:65331709-65331728	None:intergenic	30.0%
!!!	GATTTTTTAGCTTCAATTCC+GGG	-	chr5_2:65331772-65331791	Msa0782360:intron	30.0%
	TTCATAAACAGTAAAGTGTG+GGG	-	chr5_2:65331827-65331846	Msa0782360:intron	30.0%
!	TTTGAAACTATGTTAGGGTT+TGG	-	chr5_2:65331976-65331995	Msa0782360:intron	30.0%
	TGATGAACATGGAAACTAAT+AGG	-	chr5_2:65332046-65332065	Msa0782360:intron	30.0%
	AATTCTTGAAAGGAAAAGCA+TGG	+	chr5_2:65332735-65332754	None:intergenic	30.0%
!!	TCTCTTTTCTAGGTTTTTAG+GGG	+	chr5_2:65332926-65332945	None:intergenic	30.0%
!!!	GAATGGTCTATGTGTTTTTT+TGG	-	chr5_2:65332952-65332971	Msa0782360:intron	30.0%
	TTGAACTAGGTTAAAAGGTT+TGG	-	chr5_2:65333174-65333193	Msa0782360:intron	30.0%
	ATGATAGATTACTTCCTATG+GGG	-	chr5_2:65333199-65333218	Msa0782360:intron	30.0%
	AAATCCATCAAGATTGCATT+GGG	+	chr5_2:65333479-65333498	None:intergenic	30.0%
	AAAAATGCCTTCAAAACATC+CGG	+	chr5_2:65333502-65333521	None:intergenic	30.0%
	ATGATATTCACACAAACACT+AGG	+	chr5_2:65333575-65333594	None:intergenic	30.0%
	GAACCATGTAAATGAAGTTA+AGG	+	chr5_2:65333634-65333653	None:intergenic	30.0%
	TTAAGGAAAACATACGACAA+AGG	+	chr5_2:65333730-65333749	None:intergenic	30.0%
!	TGTAGTAGTTTAGTTTCTAG+TGG	-	chr5_2:65333827-65333846	Msa0782360:intron	30.0%
!!	TGCCTTAGTTGATTTTCATA+TGG	-	chr5_2:65333877-65333896	Msa0782360:intron	30.0%
!!	GCCTTAGTTGATTTTCATAT+GGG	-	chr5_2:65333878-65333897	Msa0782360:intron	30.0%
	ACCCATATGAAAATCAACTA+AGG	+	chr5_2:65333882-65333901	None:intergenic	30.0%
	TGAAAGTCCCATTTAATGAT+AGG	-	chr5_2:65334014-65334033	Msa0782360:intron	30.0%
!	CATCAATTGACAAAGTCTTT+TGG	-	chr5_2:65334045-65334064	Msa0782360:intron	30.0%
!!!	TACATGACCCCTTTTTTTAT+AGG	-	chr5_2:65334547-65334566	Msa0782360:intron	30.0%
!!!	TGGTGTTGTGTTATTTTGAA+AGG	-	chr5_2:65334837-65334856	Msa0782360:intron	30.0%
	AAAGAATGGAAAGTTACCAA+AGG	-	chr5_2:65335013-65335032	Msa0782360:CDS	30.0%
!	GTCAATGATTTATGCTTTTG+AGG	-	chr5_2:65335496-65335515	Msa0782360:CDS	30.0%
!!	AATGATTTATGCTTTTGAGG+AGG	-	chr5_2:65335499-65335518	Msa0782360:CDS	30.0%
	TGATTTCTTAATCAATGCAC+AGG	-	chr5_2:65335558-65335577	Msa0782360:CDS	30.0%
	GATTTCTTAATCAATGCACA+GGG	-	chr5_2:65335559-65335578	Msa0782360:CDS	30.0%
	ATTTCTTAATCAATGCACAG+GGG	-	chr5_2:65335560-65335579	Msa0782360:CDS	30.0%
	TTCGAGATCAAAAACATTAG+AGG	-	chr5_2:65335651-65335670	Msa0782360:CDS	30.0%
	TAAATTATCGCAATCATAGG+AGG	+	chr5_2:65335749-65335768	None:intergenic	30.0%
	TTGTGATTTGATGAACATGT+AGG	-	chr5_2:65335901-65335920	Msa0782360:five_prime_UTR	30.0%
!	ATTTGAAGCAGATCAACAAT+TGG	-	chr5_2:65335963-65335982	Msa0782360:five_prime_UTR	30.0%
!	TTAATGTGCTAAAGAAGCAT+AGG	+	chr5_2:65336109-65336128	None:intergenic	30.0%
	TAAAATTACCTAGGTTGTGA+AGG	-	chr5_2:65336161-65336180	Msa0782360:five_prime_UTR	30.0%
	CTGATAAATATGTAGAGTTC+AGG	+	chr5_2:65336264-65336283	None:intergenic	30.0%
	TGTTGTGTTGTGTTAATTGC+AGG	+	chr5_2:65331506-65331525	None:intergenic	35.0%
	TGTTTGATGTACACAACAGA+AGG	-	chr5_2:65331598-65331617	Msa0782360:CDS	35.0%
!	CAGAAGAATAGGGATTTTTG+GGG	+	chr5_2:65331708-65331727	None:intergenic	35.0%
!	GTCAGAAGAATAGGGATTTT+TGG	+	chr5_2:65331710-65331729	None:intergenic	35.0%
	TTGCAGTGAGATTTCTTCTA+TGG	-	chr5_2:65332008-65332027	Msa0782360:intron	35.0%
	CACTTGTAGGGATAAAATCA+TGG	-	chr5_2:65332158-65332177	Msa0782360:intron	35.0%
!!!	CAAGTTTTCGCTTGTTTTGA+TGG	-	chr5_2:65332491-65332510	Msa0782360:intron	35.0%
!!!	AGTGTGATTTTTTTGCAGGT+TGG	-	chr5_2:65332518-65332537	Msa0782360:intron	35.0%
	GAAATATTGAATGGCTCTTC+AGG	-	chr5_2:65332590-65332609	Msa0782360:intron	35.0%
	GGAAGTAGTAGTTCTTGTAT+AGG	-	chr5_2:65332620-65332639	Msa0782360:CDS	35.0%
!	AAAAGCATGGCTTCTTTGAA+GGG	+	chr5_2:65332722-65332741	None:intergenic	35.0%
	ATCTTCATGACCATTATCCT+TGG	-	chr5_2:65332817-65332836	Msa0782360:CDS	35.0%
	TAATTGAACTACTAGAGGTG+TGG	+	chr5_2:65332898-65332917	None:intergenic	35.0%
	GGTGATAATTGAACTACTAG+AGG	+	chr5_2:65332903-65332922	None:intergenic	35.0%
!!	TCTTTTCTAGGTTTTTAGGG+GGG	+	chr5_2:65332924-65332943	None:intergenic	35.0%
!!	CTCTTTTCTAGGTTTTTAGG+GGG	+	chr5_2:65332925-65332944	None:intergenic	35.0%
	TGTTAACCCTCTAGTTACTA+GGG	-	chr5_2:65332992-65333011	Msa0782360:intron	35.0%
	GTCATATTATACTTACCTCG+CGG	+	chr5_2:65333044-65333063	None:intergenic	35.0%
	ATGACCAAGAATTAGTGAGA+TGG	-	chr5_2:65333059-65333078	Msa0782360:intron	35.0%
!!	GTGTTTTTAACATGGATCCA+AGG	-	chr5_2:65333148-65333167	Msa0782360:intron	35.0%
	TTAACCTAGTTCAAACACCT+TGG	+	chr5_2:65333168-65333187	None:intergenic	35.0%
	GGTGTTTGAACTAGGTTAAA+AGG	-	chr5_2:65333169-65333188	Msa0782360:intron	35.0%
	TGACAACTACGATTGATTGT+TGG	+	chr5_2:65333326-65333345	None:intergenic	35.0%
	AATTCCCAATGCAATCTTGA+TGG	-	chr5_2:65333472-65333491	Msa0782360:intron	35.0%
	GAAATCCATCAAGATTGCAT+TGG	+	chr5_2:65333480-65333499	None:intergenic	35.0%
!!	ATGCAATCTTGATGGATTTC+CGG	-	chr5_2:65333480-65333499	Msa0782360:intron	35.0%
	GAAAGAAGAACTAACACACA+AGG	+	chr5_2:65333599-65333618	None:intergenic	35.0%
!!	AGTAGTTTAGTTTCTAGTGG+TGG	-	chr5_2:65333830-65333849	Msa0782360:intron	35.0%
!	AATTGACAAAGTCTTTTGGC+AGG	-	chr5_2:65334049-65334068	Msa0782360:intron	35.0%
	ACATTGAAGGAGATTTAAGG+AGG	+	chr5_2:65334641-65334660	None:intergenic	35.0%
	CAGTTCATGTAATCATTGTC+CGG	+	chr5_2:65334693-65334712	None:intergenic	35.0%
!!	TAGTTCTTCCGTTTGATTTG+TGG	-	chr5_2:65334817-65334836	Msa0782360:intron	35.0%
	ACACAACACCACAAATCAAA+CGG	+	chr5_2:65334828-65334847	None:intergenic	35.0%
	AACAACCTAGATACTACTCA+AGG	-	chr5_2:65334906-65334925	Msa0782360:intron	35.0%
	GATGTAGAATAGTTACCGAT+GGG	+	chr5_2:65335091-65335110	None:intergenic	35.0%
	AGATGTAGAATAGTTACCGA+TGG	+	chr5_2:65335092-65335111	None:intergenic	35.0%
	TCATATATCAATCATGCCGT+TGG	-	chr5_2:65335121-65335140	Msa0782360:CDS	35.0%
	TGTGCTATGAAACATTCCAA+CGG	+	chr5_2:65335140-65335159	None:intergenic	35.0%
	TGTTGATCTGCTTCAAATCT+AGG	+	chr5_2:65335961-65335980	None:intergenic	35.0%
	ATATTGTACCTTCACAACCT+AGG	+	chr5_2:65336172-65336191	None:intergenic	35.0%
	CTTTAATCTGTAGAAAGGTG+AGG	-	chr5_2:65336219-65336238	Msa0782360:five_prime_UTR	35.0%
	TGTGTTGTGTTAATTGCAGG+TGG	+	chr5_2:65331503-65331522	None:intergenic	40.0%
!!!	ATAGGGATTTTTGGGGTTCT+TGG	+	chr5_2:65331701-65331720	None:intergenic	40.0%
	GGGAAAGAGTCAGAAGAATA+GGG	+	chr5_2:65331718-65331737	None:intergenic	40.0%
	TGGGAAAGAGTCAGAAGAAT+AGG	+	chr5_2:65331719-65331738	None:intergenic	40.0%
!	ATAATTGTCCAGAGTACTCC+CGG	+	chr5_2:65331793-65331812	None:intergenic	40.0%
	GAAACTATGTTAGGGTTTGG+AGG	-	chr5_2:65331979-65331998	Msa0782360:intron	40.0%
	CCAGAAGAATTGTTACTCAG+AGG	+	chr5_2:65332087-65332106	None:intergenic	40.0%
	CCTCTGAGTAACAATTCTTC+TGG	-	chr5_2:65332084-65332103	Msa0782360:intron	40.0%
!!	TGTTGTTGTTGGTGTTGTTC+TGG	+	chr5_2:65332140-65332159	None:intergenic	40.0%
	ACACCAACAACAACACTTGT+AGG	-	chr5_2:65332145-65332164	Msa0782360:intron	40.0%
	CACCAACAACAACACTTGTA+GGG	-	chr5_2:65332146-65332165	Msa0782360:intron	40.0%
!	ATCCCTACAAGTGTTGTTGT+TGG	+	chr5_2:65332151-65332170	None:intergenic	40.0%
	CTTCAAGCAATTGAGGTAAG+AGG	+	chr5_2:65332211-65332230	None:intergenic	40.0%
	CTCTTACCTCAATTGCTTGA+AGG	-	chr5_2:65332209-65332228	Msa0782360:intron	40.0%
!	TGTGTGAGAGTTTGAAGTTC+AGG	+	chr5_2:65332236-65332255	None:intergenic	40.0%
	TATTGAATGGCTCTTCAGGA+AGG	-	chr5_2:65332594-65332613	Msa0782360:intron	40.0%
	TCTTGTATAGGTGAAGATCC+AGG	-	chr5_2:65332632-65332651	Msa0782360:CDS	40.0%
	TATAGGTGAAGATCCAGGTT+TGG	-	chr5_2:65332637-65332656	Msa0782360:CDS	40.0%
!	GAAAAGCATGGCTTCTTTGA+AGG	+	chr5_2:65332723-65332742	None:intergenic	40.0%
	GCTGAGACTCAATTCTTGAA+AGG	+	chr5_2:65332745-65332764	None:intergenic	40.0%
	AAGAATTGAGTCTCAGCTCA+AGG	-	chr5_2:65332748-65332767	Msa0782360:CDS	40.0%
!!	GTTGCTGTTTCAACTGACTT+TGG	-	chr5_2:65332773-65332792	Msa0782360:CDS	40.0%
	GTGTTAACCCTCTAGTTACT+AGG	-	chr5_2:65332991-65333010	Msa0782360:intron	40.0%
!!	TGGATTTCCGGATGTTTTGA+AGG	-	chr5_2:65333492-65333511	Msa0782360:intron	40.0%
	TTTCCTTTCATGTGTGACCT+TGG	-	chr5_2:65333525-65333544	Msa0782360:intron	40.0%
	TAACCAAGGTCACACATGAA+AGG	+	chr5_2:65333531-65333550	None:intergenic	40.0%
!!	AGTTTAGTTTCTAGTGGTGG+AGG	-	chr5_2:65333833-65333852	Msa0782360:intron	40.0%
	GGGACTTTCAACTTCTTTAG+TGG	+	chr5_2:65334004-65334023	None:intergenic	40.0%
	TTCACAACTTAGGGGATGAT+TGG	-	chr5_2:65334213-65334232	Msa0782360:intron	40.0%
	AAGCATTCCTCACACTAATG+TGG	-	chr5_2:65334386-65334405	Msa0782360:intron	40.0%
	AGCATTCCTCACACTAATGT+GGG	-	chr5_2:65334387-65334406	Msa0782360:intron	40.0%
	AGTAAATTGTTAGAGGGGAG+AGG	-	chr5_2:65334583-65334602	Msa0782360:intron	40.0%
	GTAAATTGTTAGAGGGGAGA+GGG	-	chr5_2:65334584-65334603	Msa0782360:intron	40.0%
	TAGTTTCCGAGGATCAAACT+CGG	-	chr5_2:65334613-65334632	Msa0782360:intron	40.0%
	GGGACATTGAAGGAGATTTA+AGG	+	chr5_2:65334644-65334663	None:intergenic	40.0%
	CTTCACCTTGAGTAGTATCT+AGG	+	chr5_2:65334914-65334933	None:intergenic	40.0%
	TACTACTCAAGGTGAAGATC+AGG	-	chr5_2:65334917-65334936	Msa0782360:CDS	40.0%
!!	CGCAAGTATAGTGGATATCT+AGG	-	chr5_2:65334960-65334979	Msa0782360:CDS	40.0%
!	TTACAAATGGCCTTACCCAT+CGG	-	chr5_2:65335073-65335092	Msa0782360:CDS	40.0%
	AGAATAGTTACCGATGGGTA+AGG	+	chr5_2:65335086-65335105	None:intergenic	40.0%
!!	TTCTGCAAGTGCTTGCTTTT+GGG	+	chr5_2:65335930-65335949	None:intergenic	40.0%
!	ATTCTGCAAGTGCTTGCTTT+TGG	+	chr5_2:65335931-65335950	None:intergenic	40.0%
	TTAATCAGAGAAAACGCCAC+TGG	-	chr5_2:65335990-65336009	Msa0782360:five_prime_UTR	40.0%
	GCAAATTGCATATCCTCAGA+AGG	+	chr5_2:65336019-65336038	None:intergenic	40.0%
!!	GGATATGCAATTTGCTGTGA+TGG	-	chr5_2:65336024-65336043	Msa0782360:five_prime_UTR	40.0%
	GGATGCCACAAATTACTACA+TGG	-	chr5_2:65336045-65336064	Msa0782360:five_prime_UTR	40.0%
	ATGAATCTCACTGCCCTTCT+TGG	+	chr5_2:65331394-65331413	None:intergenic	45.0%
	GTGTGGGGACTAAGCAAAAT+AGG	-	chr5_2:65331842-65331861	Msa0782360:intron	45.0%
	TCAGGACCTTCAAGCAATTG+AGG	+	chr5_2:65332218-65332237	None:intergenic	45.0%
	TCCAGGTTTGGATCAGTTCA+TGG	-	chr5_2:65332649-65332668	Msa0782360:CDS	45.0%
	TCCATGAACTGATCCAAACC+TGG	+	chr5_2:65332653-65332672	None:intergenic	45.0%
	AGGTTTGGATCAGTTCATGG+AGG	-	chr5_2:65332652-65332671	Msa0782360:CDS	45.0%
	AGGGCCATCTCACTAATTCT+TGG	+	chr5_2:65333066-65333085	None:intergenic	45.0%
!	GGATCCAAGGTGTTTGAACT+AGG	-	chr5_2:65333161-65333180	Msa0782360:intron	45.0%
	CGACAAAGGATGACAAGACA+TGG	+	chr5_2:65333716-65333735	None:intergenic	45.0%
	TTAGGGGATGATTGGCAATG+TGG	-	chr5_2:65334221-65334240	Msa0782360:intron	45.0%
	TAGGGGATGATTGGCAATGT+GGG	-	chr5_2:65334222-65334241	Msa0782360:intron	45.0%
	TTGTGTCCCACATTAGTGTG+AGG	+	chr5_2:65334396-65334415	None:intergenic	45.0%
!	GAGGGAAATGTTAGTTTCCG+AGG	-	chr5_2:65334602-65334621	Msa0782360:intron	45.0%
	ATGTAATCATTGTCCGGCGT+AGG	+	chr5_2:65334687-65334706	None:intergenic	45.0%
	CAGCTTCTACGCAAGTATAG+TGG	-	chr5_2:65334951-65334970	Msa0782360:CDS	45.0%
	CTCGACAGCAACTACTTGAT+TGG	-	chr5_2:65335039-65335058	Msa0782360:intron	45.0%
	GACAGCAACTACTTGATTGG+TGG	-	chr5_2:65335042-65335061	Msa0782360:intron	45.0%
	AACTACTTGATTGGTGGAGC+AGG	-	chr5_2:65335048-65335067	Msa0782360:intron	45.0%
!	TAATCAATGCACAGGGGCAT+CGG	-	chr5_2:65335566-65335585	Msa0782360:CDS	45.0%
	GATGTGCAAGCCATTTCCTA+TGG	-	chr5_2:65336075-65336094	Msa0782360:five_prime_UTR	45.0%
	GGCATAGCATCCATAGGAAA+TGG	+	chr5_2:65336088-65336107	None:intergenic	45.0%
	AGCATAGGCATAGCATCCAT+AGG	+	chr5_2:65336094-65336113	None:intergenic	45.0%
!!	AGGGTTTTGCATGAGTTGAG+AGG	+	chr5_2:65336133-65336152	None:intergenic	45.0%
	TGTAGAGTTCAGGGATAGTG+TGG	+	chr5_2:65336254-65336273	None:intergenic	45.0%
!!	CTTCAATTCCGGGAGTACTC+TGG	-	chr5_2:65331782-65331801	Msa0782360:intron	50.0%
	GACAAGAGACGAGGAAAGAG+AGG	+	chr5_2:65332189-65332208	None:intergenic	50.0%
	AGGTAAGAGGACAAGAGACG+AGG	+	chr5_2:65332198-65332217	None:intergenic	50.0%
	TCTAAGCTAGCCACCACTTC+AGG	+	chr5_2:65332551-65332570	None:intergenic	50.0%
!!	TGAAGTGGTGGCTAGCTTAG+AGG	-	chr5_2:65332550-65332569	Msa0782360:intron	50.0%
	AATGGCTCTTCAGGAAGGAC+AGG	-	chr5_2:65332599-65332618	Msa0782360:intron	50.0%
	AACCCTCTAGTTACTAGGGC+AGG	-	chr5_2:65332996-65333015	Msa0782360:intron	50.0%
	ACCCTCTAGTTACTAGGGCA+GGG	-	chr5_2:65332997-65333016	Msa0782360:intron	50.0%
!!	TAGTTTCTAGTGGTGGAGGC+AGG	-	chr5_2:65333837-65333856	Msa0782360:intron	50.0%
!!	AGTTTCTAGTGGTGGAGGCA+GGG	-	chr5_2:65333838-65333857	Msa0782360:intron	50.0%
	AATGTGGGACACGAGTGGAT+TGG	-	chr5_2:65334237-65334256	Msa0782360:intron	50.0%
	GAGGTTCCGAGTTTGATCCT+CGG	+	chr5_2:65334622-65334641	None:intergenic	50.0%
	GGTGAGCTAAGGGACATTGA+AGG	+	chr5_2:65334654-65334673	None:intergenic	50.0%
!!	TAGCTCGGTTGGTGAGCTAA+GGG	+	chr5_2:65334664-65334683	None:intergenic	50.0%
	AGTTGCTGTCGAGCTTCCTT+TGG	+	chr5_2:65335032-65335051	None:intergenic	50.0%
	GGTGGAGCAGGCATTACAAA+TGG	-	chr5_2:65335060-65335079	Msa0782360:intron	50.0%
	CAAGCACTTGCAGAATCCAC+AGG	-	chr5_2:65335935-65335954	Msa0782360:five_prime_UTR	50.0%
	CTGCTTCAAATCTAGGCCTG+TGG	+	chr5_2:65335954-65335973	None:intergenic	50.0%
	TATCCTCAGAAGGCTTCCAG+TGG	+	chr5_2:65336009-65336028	None:intergenic	50.0%
	TGCAGGTGGAGACAGAGAGA+GGG	+	chr5_2:65331489-65331508	None:intergenic	55.0%
	TTGCAGGTGGAGACAGAGAG+AGG	+	chr5_2:65331490-65331509	None:intergenic	55.0%
	AAGCTAGCCACCACTTCAGG+AGG	+	chr5_2:65332548-65332567	None:intergenic	55.0%
	CCCCTGCCCTAGTAACTAGA+GGG	+	chr5_2:65333001-65333020	None:intergenic	55.0%
	CCCTCTAGTTACTAGGGCAG+GGG	-	chr5_2:65332998-65333017	Msa0782360:intron	55.0%
	CGGCCAACTCTGGATTACCA+GGG	+	chr5_2:65333024-65333043	None:intergenic	55.0%
!!	GTTTCTAGTGGTGGAGGCAG+GGG	-	chr5_2:65333839-65333858	Msa0782360:intron	55.0%
	TTGGCAATGTGGGACACGAG+TGG	-	chr5_2:65334232-65334251	Msa0782360:intron	55.0%
!!	GTAGCTCGGTTGGTGAGCTA+AGG	+	chr5_2:65334665-65334684	None:intergenic	55.0%
	ATTGTCCGGCGTAGGTAGCT+CGG	+	chr5_2:65334679-65334698	None:intergenic	55.0%
!	GGTTGGAGCACCTCCTGAAG+TGG	-	chr5_2:65332535-65332554	Msa0782360:intron	60.0%
!	TGGAGCACCTCCTGAAGTGG+TGG	-	chr5_2:65332538-65332557	Msa0782360:intron	60.0%
	GCCCCTGCCCTAGTAACTAG+AGG	+	chr5_2:65333002-65333021	None:intergenic	60.0%
	GGGCCCTGGTAATCCAGAGT+TGG	-	chr5_2:65333018-65333037	Msa0782360:intron	60.0%
	GCGGCCAACTCTGGATTACC+AGG	+	chr5_2:65333025-65333044	None:intergenic	60.0%
	GTAATCCAGAGTTGGCCGCG+AGG	-	chr5_2:65333026-65333045	Msa0782360:intron	60.0%
	ACTTACCTCGCGGCCAACTC+TGG	+	chr5_2:65333034-65333053	None:intergenic	60.0%
	ACCAACCGAGCTACCTACGC+CGG	-	chr5_2:65334671-65334690	Msa0782360:intron	60.0%
	ACGCCACTGGAAGCCTTCTG+AGG	-	chr5_2:65336003-65336022	Msa0782360:five_prime_UTR	60.0%
	AGTTACTAGGGCAGGGGCCC+TGG	-	chr5_2:65333004-65333023	Msa0782360:intron	65.0%
	TCCGGCGTAGGTAGCTCGGT+TGG	+	chr5_2:65334675-65334694	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_2	gene	65331379	65336330	65331379	ID=Msa0782360;Name=Msa0782360
chr5_2	mRNA	65331379	65336330	65331379	ID=Msa0782360-mRNA-1;Parent=Msa0782360;Name=Msa0782360-mRNA-1;_AED=0.02;_eAED=0.02;_QI=520\|0.8\|0.66\|1\|0.6\|0.5\|6\|210\|294
chr5_2	exon	65331379	65331786	65331379	ID=Msa0782360-mRNA-1:exon:19594;Parent=Msa0782360-mRNA-1
chr5_2	exon	65332615	65332850	65332615	ID=Msa0782360-mRNA-1:exon:19593;Parent=Msa0782360-mRNA-1
chr5_2	exon	65334915	65335055	65334915	ID=Msa0782360-mRNA-1:exon:19592;Parent=Msa0782360-mRNA-1
chr5_2	exon	65335068	65335173	65335068	ID=Msa0782360-mRNA-1:exon:19591;Parent=Msa0782360-mRNA-1
chr5_2	exon	65335479	65335717	65335479	ID=Msa0782360-mRNA-1:exon:19590;Parent=Msa0782360-mRNA-1
chr5_2	exon	65335846	65336330	65335846	ID=Msa0782360-mRNA-1:exon:19589;Parent=Msa0782360-mRNA-1
chr5_2	five_prime_UTR	65335846	65336330	65335846	ID=Msa0782360-mRNA-1:five_prime_utr;Parent=Msa0782360-mRNA-1
chr5_2	five_prime_UTR	65335683	65335717	65335683	ID=Msa0782360-mRNA-1:five_prime_utr;Parent=Msa0782360-mRNA-1
chr5_2	CDS	65335479	65335682	65335479	ID=Msa0782360-mRNA-1:cds;Parent=Msa0782360-mRNA-1
chr5_2	CDS	65335068	65335173	65335068	ID=Msa0782360-mRNA-1:cds;Parent=Msa0782360-mRNA-1
chr5_2	CDS	65334915	65335055	65334915	ID=Msa0782360-mRNA-1:cds;Parent=Msa0782360-mRNA-1
chr5_2	CDS	65332615	65332850	65332615	ID=Msa0782360-mRNA-1:cds;Parent=Msa0782360-mRNA-1
chr5_2	CDS	65331589	65331786	65331589	ID=Msa0782360-mRNA-1:cds;Parent=Msa0782360-mRNA-1
chr5_2	three_prime_UTR	65331379	65331588	65331379	ID=Msa0782360-mRNA-1:three_prime_utr;Parent=Msa0782360-mRNA-1

Gene Sequence

>Msa0782360

ATGGATCATCAAAATCAAATGATGAACATGGAAACTAATAGGAAGTTTTTTTCATTTCCTCTGAGTAACAATTCTTCTGGTGTTCAAAATCATCATAACTACACTCAACACCAGAACAACACCAACAACAACACTTGTAGGGATAAAATCATGGCTCATCCTCTCTTTCCTCGTCTCTTGTCCTCTTACCTCAATTGCTTGAAGGTTGGAGCACCTCCTGAAGTGGTGGCTAGCTTAGAGGAGTCATGTGCAAAATGTGAAATATTGAATGGCTCTTCAGGAAGGACAGGAAGTAGTAGTTCTTGTATAGGTTTGGATCAGTTCATGGAGGCATATTGTGAGATGCTTATCAAGTATGAGCAAGAACTCACTAAACCCTTCAAAGAAGCCATGCTTTTCCTTTCAAGAATTGAGTCTCAGCTCAAGGCTGTTGCTGTTTCAACTGACTTTGGTCAAAGTGAATTTGCAGCTTCACAGAATGAGATTGATGTGCATGAAAACAACCTAGATACTACTCAAGGTGAAGATCAGGAATTAAAAGTGCAGCTTCTACGCAAGTATAGTGGATATCTAGGAAGCCTTAAGAAAGAGTTTTTGAAGAAGAAAAAGAATGGAAAGTTACCAAAGGAAGCTCGACAGCAACTACTTGATTGGTGGAGCAGGCATTACAAATGGCCTTACCCATCGGAATCCCAAAAGCAAGCACTTGCAGAATCCACAGGCCTAGATTTGAAGCAGATCAACAATTGGTTCATTAATCAGAGAAAACGCCACTGGAAGCCTTCTGAGGATATGCAATTTGCTGTGATGGATGCCACAAATTACTACATGGAAAATGTGATGTGCAAGCCATTTCCTATGGATGCTATGCCTATGCTTCTTTAG

Protein sequence

>Msa0782360

MDHQNQMMNMETNRKFFSFPLSNNSSGVQNHHNYTQHQNNTNNNTCRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCEILNGSSGRTGSSSSCIGLDQFMEAYCEMLIKYEQELTKPFKEAMLFLSRIESQLKAVAVSTDFGQSEFAASQNEIDVHENNLDTTQGEDQELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKQALAESTGLDLKQINNWFINQRKRHWKPSEDMQFAVMDATNYYMENVMCKPFPMDAMPMLL*