AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0739470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739470 MtrunA17_Chr5g0439271 87.874 602 23 3 158 712 4 602 0.0 1071
Msa0739470 MtrunA17_Chr7g0250371 55.856 777 254 16 13 711 19 784 0.0 786
Msa0739470 MtrunA17_Chr7g0250481 53.895 783 261 14 21 711 23 797 0.0 785
Msa0739470 MtrunA17_Chr7g0250391 55.698 781 261 16 8 711 10 782 0.0 769
Msa0739470 MtrunA17_Chr7g0250411 54.113 778 265 18 13 711 19 783 0.0 746
Msa0739470 MtrunA17_Chr7g0250331 54.430 790 252 18 22 711 25 806 0.0 738
Msa0739470 MtrunA17_Chr3g0120521 48.473 753 307 14 28 711 29 769 0.0 667
Msa0739470 MtrunA17_Chr4g0057531 49.009 757 311 14 23 711 27 776 0.0 659
Msa0739470 MtrunA17_Chr4g0057471 47.368 722 294 16 62 711 1 708 0.0 610
Msa0739470 MtrunA17_Chr4g0076611 46.844 713 285 15 73 711 1 693 0.0 598
Msa0739470 MtrunA17_Chr4g0057481 48.766 689 266 17 95 711 16 689 0.0 577
Msa0739470 MtrunA17_Chr4g0057461 48.768 609 245 13 155 711 35 628 0.0 536
Msa0739470 MtrunA17_Chr4g0057511 48.922 603 246 11 154 711 30 615 2.28e-180 528
Msa0739470 MtrunA17_Chr4g0057491 48.253 601 255 10 154 711 34 621 1.69e-176 518
Msa0739470 MtrunA17_Chr5g0423261 47.920 601 257 10 154 711 34 621 2.83e-174 512
Msa0739470 MtrunA17_Chr4g0037221 39.724 725 337 19 70 711 60 767 1.47e-157 474
Msa0739470 MtrunA17_Chr7g0250461 55.195 462 162 11 13 441 19 468 4.22e-152 451
Msa0739470 MtrunA17_Chr4g0053781 37.516 773 377 23 13 711 14 754 3.20e-151 457
Msa0739470 MtrunA17_Chr5g0401511 38.550 786 380 25 1 710 1 759 4.52e-150 455
Msa0739470 MtrunA17_Chr4g0026641 39.687 766 342 24 28 711 26 753 3.43e-149 452
Msa0739470 MtrunA17_Chr1g0204321 37.532 786 395 21 1 711 12 776 1.74e-147 449
Msa0739470 MtrunA17_Chr4g0020651 38.412 781 377 24 4 709 3 754 3.46e-146 444
Msa0739470 MtrunA17_Chr2g0300751 36.318 793 384 23 10 709 6 770 3.57e-145 442
Msa0739470 MtrunA17_Chr1g0152771 36.236 781 389 22 10 709 8 760 5.08e-142 434
Msa0739470 MtrunA17_Chr8g0351011 37.416 743 367 19 30 711 46 751 7.61e-140 428
Msa0739470 MtrunA17_Chr3g0136151 37.105 760 368 21 28 711 36 761 1.90e-139 427
Msa0739470 MtrunA17_Chr8g0369891 38.208 759 355 25 28 711 33 752 1.90e-139 427
Msa0739470 MtrunA17_Chr5g0407701 38.492 756 360 28 28 711 27 749 1.04e-137 422
Msa0739470 MtrunA17_Chr7g0262161 36.184 760 383 20 29 711 26 760 7.59e-135 416
Msa0739470 MtrunA17_Chr2g0285121 37.387 773 379 23 28 711 26 782 1.65e-133 412
Msa0739470 MtrunA17_Chr5g0447171 44.767 516 186 10 281 711 6 507 2.97e-133 403
Msa0739470 MtrunA17_Chr3g0134621 35.202 767 360 21 21 709 26 733 3.95e-131 405
Msa0739470 MtrunA17_Chr8g0334521 35.611 761 394 25 5 711 15 733 5.64e-131 404
Msa0739470 MtrunA17_Chr2g0285111 36.706 771 387 20 28 711 29 785 1.68e-130 405
Msa0739470 MtrunA17_Chr3g0143251 37.056 788 378 25 8 711 11 764 2.65e-130 404
Msa0739470 MtrunA17_Chr8g0344331 36.602 724 348 21 72 709 74 772 1.78e-129 402
Msa0739470 MtrunA17_Chr7g0246451 35.963 748 370 22 30 711 41 745 2.09e-129 400
Msa0739470 MtrunA17_Chr4g0070391 36.783 715 351 23 73 709 58 749 2.52e-129 401
Msa0739470 MtrunA17_Chr8g0354771 35.480 761 401 20 24 711 20 763 3.57e-128 398
Msa0739470 MtrunA17_Chr8g0377961 37.188 761 369 26 30 711 44 774 1.44e-127 397
Msa0739470 MtrunA17_Chr7g0227991 36.000 775 376 28 8 711 8 733 5.10e-126 392
Msa0739470 MtrunA17_Chr1g0146271 35.195 770 395 27 1 711 8 732 8.42e-126 391
Msa0739470 MtrunA17_Chr8g0344971 36.291 755 389 23 27 711 27 759 1.54e-124 389
Msa0739470 MtrunA17_Chr6g0470851 36.340 776 377 31 3 711 4 729 5.66e-123 384
Msa0739470 MtrunA17_Chr8g0334491 36.364 759 360 28 20 711 25 727 1.58e-121 380
Msa0739470 MtrunA17_Chr7g0246461 35.775 710 335 22 73 711 80 739 3.26e-121 379
Msa0739470 MtrunA17_Chr1g0170081 34.755 774 391 27 1 711 8 730 4.66e-121 379
Msa0739470 MtrunA17_Chr6g0470881 36.093 773 383 29 3 711 4 729 1.56e-120 377
Msa0739470 MtrunA17_Chr1g0146251 35.202 767 387 26 8 711 15 734 2.52e-120 377
Msa0739470 MtrunA17_Chr7g0266051 34.938 727 367 19 55 712 17 706 1.70e-119 374
Msa0739470 MtrunA17_Chr3g0079971 35.425 765 391 29 8 711 9 731 5.20e-117 368
Msa0739470 MtrunA17_Chr4g0057061 35.450 756 375 23 28 711 60 774 2.04e-116 368
Msa0739470 MtrunA17_Chr8g0354741 38.937 583 295 13 165 705 64 627 3.08e-116 363
Msa0739470 MtrunA17_Chr1g0189251 34.221 789 405 24 1 711 1 753 4.21e-113 358
Msa0739470 MtrunA17_Chr8g0345971 36.238 723 335 21 73 711 78 758 2.18e-112 357
Msa0739470 MtrunA17_Chr8g0376841 37.842 584 255 15 27 539 39 585 5.40e-112 350
Msa0739470 MtrunA17_Chr8g0345991 35.021 711 364 21 73 711 69 753 3.54e-110 351
Msa0739470 MtrunA17_Chr6g0480721 35.103 678 320 18 73 712 5 600 1.05e-108 343
Msa0739470 MtrunA17_Chr8g0345981 36.427 722 341 26 73 711 71 757 4.15e-108 345
Msa0739470 MtrunA17_Chr5g0398241 33.632 782 392 20 13 712 18 754 1.58e-105 338
Msa0739470 MtrunA17_Chr1g0189561 33.668 796 401 28 1 711 7 760 1.87e-105 338
Msa0739470 MtrunA17_Chr5g0398401 33.419 778 399 20 13 712 18 754 1.08e-104 336
Msa0739470 MtrunA17_Chr5g0398311 34.800 750 378 19 29 712 43 747 7.21e-104 334
Msa0739470 MtrunA17_Chr7g0276151 35.028 708 362 21 73 711 77 755 1.59e-102 331
Msa0739470 MtrunA17_Chr2g0303881 34.957 698 382 16 73 711 41 725 1.79e-102 330
Msa0739470 MtrunA17_Chr5g0398351 34.536 776 393 21 13 712 769 1505 2.60e-101 340
Msa0739470 MtrunA17_Chr5g0398351 34.383 762 388 20 20 712 16 734 2.90e-99 334
Msa0739470 MtrunA17_Chr5g0398331 34.079 760 391 21 20 712 35 751 2.89e-101 327
Msa0739470 MtrunA17_Chr7g0248871 33.375 803 386 31 8 711 11 763 4.53e-101 327
Msa0739470 MtrunA17_Chr5g0439281 97.368 152 4 0 1 152 1 152 4.21e-99 303
Msa0739470 MtrunA17_Chr8g0345961 33.786 737 371 21 59 711 53 756 2.53e-97 317
Msa0739470 MtrunA17_Chr7g0250441 60.073 273 98 5 449 711 11 282 5.60e-95 296
Msa0739470 MtrunA17_Chr3g0103061 56.818 264 91 5 1 242 1 263 1.68e-90 283
Msa0739470 MtrunA17_Chr7g0261701 51.636 275 116 5 447 711 22 289 2.54e-87 276
Msa0739470 MtrunA17_Chr4g0071871 32.288 765 384 30 55 710 73 812 4.18e-80 272
Msa0739470 MtrunA17_Chr2g0301011 36.381 525 255 14 102 597 4 478 2.09e-79 262
Msa0739470 MtrunA17_Chr7g0248861 32.547 636 309 21 22 572 22 622 3.25e-78 268
Msa0739470 MtrunA17_Chr7g0248861 40.000 240 107 7 136 347 629 859 3.55e-33 137
Msa0739470 MtrunA17_Chr7g0261691 48.432 287 138 5 165 448 52 331 3.48e-78 254
Msa0739470 MtrunA17_Chr3g0143241 37.391 460 228 14 8 433 11 444 4.66e-74 249
Msa0739470 MtrunA17_Chr2g0298601 31.800 739 367 27 53 680 71 783 8.05e-74 255
Msa0739470 MtrunA17_Chr3g0103071 43.750 288 119 4 253 502 1 283 1.21e-67 224
Msa0739470 MtrunA17_Chr4g0075331 29.501 722 381 22 58 673 2 701 3.15e-64 227
Msa0739470 MtrunA17_Chr3g0105461 44.201 319 148 8 28 346 34 322 2.43e-62 212
Msa0739470 MtrunA17_Chr4g0035881 41.499 347 158 9 201 535 4 317 6.07e-62 210
Msa0739470 MtrunA17_Chr8g0380961 28.719 773 408 28 55 712 102 846 6.39e-61 219
Msa0739470 MtrunA17_Chr8g0346361 40.942 276 142 6 449 711 229 496 1.49e-60 211
Msa0739470 MtrunA17_Chr8g0346361 45.771 201 90 7 165 364 25 207 6.33e-41 156
Msa0739470 MtrunA17_Chr2g0301031 43.651 252 129 5 465 711 3 246 1.47e-56 193
Msa0739470 MtrunA17_Chr3g0105451 39.858 281 139 7 447 711 12 278 2.20e-56 193
Msa0739470 MtrunA17_Chr2g0312861 43.083 253 129 6 465 711 3 246 2.31e-56 194
Msa0739470 MtrunA17_Chr4g0026661 45.276 254 124 7 465 711 14 259 7.66e-56 191
Msa0739470 MtrunA17_Chr4g0026651 37.855 317 127 8 87 346 1 304 1.20e-51 182
Msa0739470 MtrunA17_Chr5g0447151 60.135 148 59 0 5 152 6 153 1.71e-51 176
Msa0739470 MtrunA17_Chr4g0057501 63.710 124 44 1 29 152 6 128 8.92e-49 167
Msa0739470 MtrunA17_Chr3g0097061 36.792 318 161 11 102 401 4 299 2.89e-44 165
Msa0739470 MtrunA17_Chr3g0097061 43.103 116 59 1 494 609 330 438 2.98e-26 112
Msa0739470 MtrunA17_Chr3g0103081 52.448 143 66 2 570 711 1 142 2.36e-43 153
Msa0739470 MtrunA17_Chr2g0301921 39.720 214 114 6 504 711 1 205 1.58e-41 150
Msa0739470 MtrunA17_Chr2g0301911 39.496 238 119 7 165 400 51 265 2.13e-38 147
Msa0739470 MtrunA17_Chr5g0436021 43.503 177 85 3 159 335 27 188 3.07e-38 140
Msa0739470 MtrunA17_Chr2g0312841 44.186 172 80 3 166 337 31 186 1.23e-34 130
Msa0739470 MtrunA17_Chr2g0302951 32.300 387 212 13 52 402 91 463 4.00e-34 139
Msa0739470 MtrunA17_Chr2g0302951 32.168 286 162 10 451 712 562 839 4.75e-25 111
Msa0739470 MtrunA17_Chr4g0057521 54.545 99 44 1 67 165 13 110 5.93e-30 115
Msa0739470 MtrunA17_Chr3g0142981 43.312 157 59 1 190 346 48 174 4.08e-29 115
Msa0739470 MtrunA17_Chr4g0071191 32.178 202 117 4 451 640 57 250 3.25e-25 105
Msa0739470 MtrunA17_Chr5g0418921 48.000 125 56 2 448 563 10 134 1.28e-24 101
Msa0739470 MtrunA17_Chr7g0261681 52.128 94 43 1 73 164 1 94 5.66e-23 94.4
Msa0739470 MtrunA17_Chr3g0143231 53.333 90 34 2 453 535 1 89 7.56e-22 90.5
Msa0739470 MtrunA17_Chr3g0142971 50.000 86 35 2 453 531 1 85 1.33e-18 81.3
Msa0739470 MtrunA17_Chr5g0436031 33.333 165 101 5 554 712 20 181 3.38e-17 81.3
Msa0739470 MtrunA17_Chr8g0354731 41.667 108 56 2 23 130 47 147 4.98e-17 79.3
Msa0739470 MtrunA17_Chr5g0398341 50.000 84 42 0 504 587 1 84 1.29e-16 75.9
Msa0739470 MtrunA17_Chr8g0376851 32.099 162 102 5 557 711 11 171 2.01e-16 77.8
Msa0739470 MtrunA17_Chr2g0301021 36.184 152 72 5 259 401 189 324 2.63e-16 81.6
Msa0739470 MtrunA17_Chr3g0142961 36.364 132 75 4 545 667 4 135 3.47e-16 75.9
Msa0739470 MtrunA17_Chr2g0312831 35.156 128 70 4 3 124 4 124 2.32e-15 73.6
Msa0739470 MtrunA17_Chr8g0346351 35.246 122 72 2 5 126 12 126 2.53e-15 74.3
Msa0739470 MtrunA17_Chr4g0035871 47.297 74 39 0 54 127 17 90 4.21e-15 73.2
Msa0739470 MtrunA17_Chr5g0434941 50.000 74 36 1 258 330 1 74 2.25e-13 65.9
Msa0739470 MtrunA17_Chr3g0143221 30.636 173 100 5 545 711 4 162 2.64e-13 68.6
Msa0739470 MtrunA17_Chr2g0301901 35.772 123 71 3 5 126 11 126 5.02e-13 67.0
Msa0739470 MtrunA17_Chr3g0077671 43.529 85 46 2 482 564 224 308 5.44e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739470 AT2G04160.1 48.930 748 309 11 29 711 31 770 0.0 684
Msa0739470 AT5G59810.1 48.800 750 309 13 25 711 37 774 0.0 662
Msa0739470 AT5G67360.1 38.144 776 381 21 9 711 5 754 4.41e-155 468
Msa0739470 AT2G05920.1 38.663 763 363 23 18 709 19 747 2.69e-151 458
Msa0739470 AT4G34980.1 36.111 792 382 24 5 711 6 758 1.29e-142 436
Msa0739470 AT5G45650.2 37.150 786 372 22 27 711 24 788 3.87e-140 430
Msa0739470 AT5G45650.1 37.150 786 372 22 27 711 24 788 3.87e-140 430
Msa0739470 AT5G51750.1 36.962 790 395 23 4 711 6 774 5.31e-138 424
Msa0739470 AT3G14240.1 36.078 765 385 22 29 711 27 769 1.70e-135 418
Msa0739470 AT1G20160.1 37.161 775 383 23 13 711 15 761 2.23e-135 417
Msa0739470 AT5G59100.1 37.353 763 353 27 21 711 28 737 1.70e-134 414
Msa0739470 AT1G20160.2 38.678 711 348 20 73 711 28 722 2.07e-134 414
Msa0739470 AT3G14067.1 35.063 790 395 27 8 711 10 767 3.30e-133 412
Msa0739470 AT1G20150.1 37.403 770 362 24 30 711 33 770 4.24e-133 412
Msa0739470 AT1G01900.1 38.235 714 345 18 73 711 79 771 6.28e-132 408
Msa0739470 AT5G59120.1 36.280 758 351 22 27 711 29 727 1.32e-129 401
Msa0739470 AT5G59090.1 36.905 756 355 25 24 711 27 728 1.71e-128 398
Msa0739470 AT5G03620.1 36.101 795 376 26 7 712 8 759 3.62e-128 398
Msa0739470 AT4G00230.1 37.185 753 355 23 30 711 38 743 5.50e-128 397
Msa0739470 AT5G59130.2 36.605 754 384 23 2 711 12 715 1.13e-127 396
Msa0739470 AT5G59130.4 36.257 764 383 24 2 711 12 725 1.56e-127 396
Msa0739470 AT5G59090.3 36.905 756 353 26 24 711 27 726 2.37e-127 395
Msa0739470 AT5G59190.1 37.901 686 324 22 55 680 15 658 3.21e-127 394
Msa0739470 AT5G58830.1 36.608 743 379 23 8 711 16 705 4.15e-127 394
Msa0739470 AT5G59090.2 36.556 755 354 24 24 711 27 723 5.40e-127 394
Msa0739470 AT5G59130.1 36.257 764 379 25 2 711 12 721 1.05e-125 391
Msa0739470 AT4G10550.1 35.242 786 404 24 3 711 9 766 7.21e-125 390
Msa0739470 AT5G59130.3 37.074 704 347 20 66 711 21 686 9.47e-125 387
Msa0739470 AT3G46840.1 36.458 768 392 27 1 711 6 734 1.00e-124 389
Msa0739470 AT4G10550.3 35.622 772 392 24 17 711 39 782 1.06e-124 390
Msa0739470 AT1G04110.1 34.177 790 412 21 7 711 4 770 1.87e-124 389
Msa0739470 AT3G46850.1 37.047 745 374 27 24 711 28 734 1.09e-123 386
Msa0739470 AT4G26330.2 37.057 734 352 21 65 712 13 722 2.63e-123 385
Msa0739470 AT1G32940.1 35.521 777 366 25 28 711 28 762 1.13e-121 382
Msa0739470 AT5G58840.1 35.178 759 384 21 2 711 7 706 1.42e-121 380
Msa0739470 AT4G10520.1 35.595 781 388 22 6 711 4 744 1.59e-121 381
Msa0739470 AT4G26330.1 36.364 748 352 21 65 712 13 736 4.21e-121 379
Msa0739470 AT1G32950.1 35.677 768 382 25 25 711 25 761 1.14e-118 374
Msa0739470 AT5G58820.1 36.510 745 342 23 27 711 27 700 7.29e-118 370
Msa0739470 AT1G32960.1 34.817 764 389 27 28 711 31 765 9.85e-118 372
Msa0739470 AT5G45640.1 35.929 732 350 19 81 711 38 751 3.10e-117 369
Msa0739470 AT4G10510.3 34.452 775 397 21 17 711 22 765 2.54e-116 368
Msa0739470 AT4G10550.4 35.157 731 376 22 58 711 1 710 7.79e-116 365
Msa0739470 AT4G10550.2 35.157 731 376 22 58 711 1 710 7.79e-116 365
Msa0739470 AT1G32940.4 35.341 747 354 24 58 711 1 711 5.38e-115 363
Msa0739470 AT1G32940.2 35.341 747 354 24 58 711 1 711 5.38e-115 363
Msa0739470 AT4G10510.1 34.514 762 388 21 30 711 23 753 6.50e-115 363
Msa0739470 AT4G10540.1 34.323 775 400 23 17 711 18 763 8.51e-115 363
Msa0739470 AT4G21630.1 35.484 775 403 25 6 711 7 753 1.87e-114 362
Msa0739470 AT1G66210.1 34.921 756 394 24 19 711 30 750 2.43e-114 362
Msa0739470 AT4G21640.1 35.780 763 376 27 8 711 20 727 1.32e-113 359
Msa0739470 AT1G32970.1 34.605 760 387 26 15 711 10 722 5.90e-113 358
Msa0739470 AT4G21650.1 35.310 759 386 28 24 711 36 760 9.87e-113 358
Msa0739470 AT1G32950.2 35.510 735 368 24 58 711 1 710 7.65e-112 354
Msa0739470 AT5G11940.1 34.186 743 404 25 28 711 36 752 1.24e-111 355
Msa0739470 AT4G10530.1 33.761 779 404 22 1 711 1 735 5.14e-110 350
Msa0739470 AT4G10510.4 34.196 734 378 20 58 711 1 709 1.28e-108 346
Msa0739470 AT1G66220.1 34.076 763 376 23 25 711 33 744 5.55e-108 345
Msa0739470 AT4G10510.2 33.936 719 370 20 73 711 1 694 6.33e-104 333
Msa0739470 AT4G15040.2 34.631 719 359 23 55 711 16 685 2.44e-103 331
Msa0739470 AT4G15040.1 34.631 719 359 23 55 711 16 685 2.44e-103 331
Msa0739470 AT5G03620.2 37.025 605 270 18 7 536 8 576 1.03e-101 323
Msa0739470 AT4G00230.2 38.112 572 253 16 30 538 38 571 9.41e-97 311
Msa0739470 AT4G21323.1 33.773 758 377 24 30 709 81 791 6.49e-96 315
Msa0739470 AT1G32940.3 35.784 612 271 19 28 553 28 603 8.18e-93 301
Msa0739470 AT5G58840.3 35.714 588 280 17 2 546 7 539 7.30e-88 286
Msa0739470 AT4G21326.1 31.513 714 402 22 58 711 1 687 7.88e-88 290
Msa0739470 AT5G67090.1 32.908 705 353 25 70 700 57 715 3.01e-87 290
Msa0739470 AT4G30020.3 30.362 774 391 28 56 712 70 812 2.34e-75 259
Msa0739470 AT4G30020.1 30.362 774 391 28 56 712 70 812 2.34e-75 259
Msa0739470 AT4G30020.4 30.362 774 391 28 56 712 70 812 2.34e-75 259
Msa0739470 AT4G30020.2 30.362 774 391 28 56 712 70 812 2.34e-75 259
Msa0739470 AT2G39850.1 29.834 781 410 36 27 711 27 765 5.36e-74 255
Msa0739470 AT2G19170.1 30.167 779 385 31 56 712 70 811 4.39e-73 253
Msa0739470 AT2G19170.2 30.167 779 385 31 56 712 70 811 4.39e-73 253
Msa0739470 AT1G30600.1 30.260 770 401 27 55 712 82 827 1.94e-72 252
Msa0739470 AT1G20160.3 35.742 512 244 16 13 464 15 501 1.33e-69 238
Msa0739470 AT4G20430.3 28.898 744 391 24 53 682 101 820 1.61e-67 238
Msa0739470 AT4G20430.1 28.898 744 391 24 53 682 101 820 1.61e-67 238
Msa0739470 AT4G20430.2 29.306 720 395 23 53 682 101 796 6.57e-66 233
Msa0739470 AT5G44530.1 28.165 774 415 25 53 712 88 834 4.95e-65 231
Msa0739470 AT1G62340.1 29.298 727 377 26 55 666 82 786 3.39e-61 220
Msa0739470 AT5G44530.2 27.284 799 415 26 53 712 88 859 4.82e-60 218
Msa0739470 AT5G58840.2 32.685 514 255 18 2 480 7 464 9.26e-57 201
Msa0739470 AT5G44530.3 29.596 446 242 16 52 453 87 504 2.54e-37 148
Msa0739470 AT1G32980.1 41.579 190 106 4 498 683 1 189 1.06e-35 134
Msa0739470 AT5G59110.1 37.267 161 92 6 559 711 7 166 5.89e-24 99.8

Find 154 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAGTTCATTGACATTTA+AGG 0.106897 5_1:-57780149 Msa0739470:CDS
TCAACAACTTGAAGAATTTA+AGG 0.116991 5_1:-57780182 Msa0739470:CDS
GGCTTTGAAGCTGCTCTTGC+AGG 0.182619 5_1:-57781866 Msa0739470:CDS
TCATTGACATTTAAGGAAAT+TGG 0.202709 5_1:-57780142 Msa0739470:CDS
CTCACAGCACGTGACTTTAT+TGG 0.216825 5_1:-57782746 Msa0739470:CDS
AGCACATGCTTACCTTTCTA+AGG 0.225071 5_1:+57784787 None:intergenic
GATTTACTTGCTTCAATCTT+AGG 0.232077 5_1:-57784573 Msa0739470:CDS
CCTCATGTTGCTGGCATTGC+TGG 0.232103 5_1:-57780801 Msa0739470:CDS
TGATGTGATTTCAACTTCTT+TGG 0.256845 5_1:-57782519 Msa0739470:CDS
GATGAAAACCCAGCCATAAT+TGG 0.268338 5_1:+57781481 None:intergenic
GTGAACAAAGCTTCAATATA+TGG 0.271746 5_1:+57782485 None:intergenic
CTTTGACCAACATACTTTGT+AGG 0.283223 5_1:+57782610 None:intergenic
CATATTGTGATTCGTAGTTT+TGG 0.287628 5_1:+57782789 None:intergenic
TCACCTGATGTAACAATATT+CGG 0.298451 5_1:-57782683 Msa0739470:CDS
ATCATGGCTAATTTAGATTC+TGG 0.299227 5_1:-57784136 Msa0739470:intron
ACAAGGTCGTGGGACTTTCT+TGG 0.300733 5_1:-57784226 Msa0739470:CDS
TCTTACAATAAGCATATAAA+TGG 0.304355 5_1:-57784439 Msa0739470:CDS
TTCACTGATGGAATTTCAAT+TGG 0.310273 5_1:-57782467 Msa0739470:CDS
GTTGTCGTTGTTTGTTCTGC+TGG 0.313843 5_1:-57782419 Msa0739470:CDS
TTGGTAGGATCAAGTGTTCT+AGG 0.318013 5_1:+57781947 None:intergenic
ATTAAAGCCATCTCCAATTA+TGG 0.319155 5_1:-57781494 Msa0739470:CDS
ACAAACTATAGAAAACTAAT+TGG 0.321436 5_1:-57782827 Msa0739470:CDS
ATGTCTTGTCCTCATGTTGC+TGG 0.337178 5_1:-57780810 Msa0739470:CDS
AGATCATCAAGGGAGGGATT+TGG 0.343007 5_1:+57784621 None:intergenic
TTTGTTAGCCATATTTCTAT+TGG 0.347963 5_1:-57782314 Msa0739470:CDS
ATAGCGACTCCATTTGAATA+TGG 0.349781 5_1:-57780475 Msa0739470:CDS
CAAGTCAATTTCCCAAATAC+TGG 0.351450 5_1:+57780061 None:intergenic
CGGATAATTCTAGAGGCAAT+AGG 0.358331 5_1:-57780103 Msa0739470:CDS
TTGCAGCTAGTACAATTGAT+AGG 0.366041 5_1:-57782340 Msa0739470:CDS
CGGTACGAGTAACGTTTATA+AGG 0.370101 5_1:+57780245 None:intergenic
ACTCCATTTGAATATGGTTC+TGG 0.377150 5_1:-57780469 Msa0739470:CDS
GTTCCTTGTTGCAGATTGTA+AGG 0.394947 5_1:+57780837 None:intergenic
GGGAAATTGACTTGGACAAA+TGG 0.397704 5_1:-57780052 Msa0739470:CDS
GAATTTCTCTTGATTCTGCT+TGG 0.409462 5_1:-57784186 Msa0739470:CDS
GCTTGGTGGAAGGCAAGATT+TGG 0.411231 5_1:-57784169 Msa0739470:CDS
GATGTGATTTCAACTTCTTT+GGG 0.412723 5_1:-57782518 Msa0739470:CDS
AATGGTTATCCTAAAATGTA+TGG 0.412985 5_1:-57779816 None:intergenic
CTGTTTCCTTTGCCTTCTCA+TGG 0.416029 5_1:+57784470 None:intergenic
TCCTTAAATGTCAATGAACT+TGG 0.416086 5_1:+57780148 None:intergenic
TAAGCTCATGAATCTCTCTA+AGG 0.416487 5_1:-57779995 Msa0739470:three_prime_UTR
CAAAACTACGAATCACAATA+TGG 0.420918 5_1:-57782788 Msa0739470:CDS
TTATCGAACGCGTCTCTGAT+TGG 0.421421 5_1:+57780499 None:intergenic
GTTTGTTCTGCTGGGAATGA+TGG 0.421493 5_1:-57782410 Msa0739470:CDS
TCAAGACACTTCATCCTAGT+TGG 0.433278 5_1:-57780773 Msa0739470:CDS
CTTGATCCTACCAAAGTAAA+GGG 0.434353 5_1:-57781938 Msa0739470:CDS
TATGTGTGTAATTGTGCTTA+TGG 0.441101 5_1:-57779943 Msa0739470:three_prime_UTR
CCTAACCTTGCAATGGATCC+AGG 0.444320 5_1:-57780436 Msa0739470:CDS
TCACGTGCTGTGAGGTTTGA+GGG 0.445205 5_1:+57782755 None:intergenic
TGAGCTTACAAGACTACTAT+AGG 0.446634 5_1:+57780010 None:intergenic
CAGTATTTGGGAAATTGACT+TGG 0.447547 5_1:-57780060 Msa0739470:CDS
ATGGCAGATTTGATAGCAGC+TGG 0.451272 5_1:+57780747 None:intergenic
TAATATCTTTCCCTTTACTT+TGG 0.455724 5_1:+57781928 None:intergenic
TAAATCATAATGTGAATTTG+TGG 0.457110 5_1:+57784590 None:intergenic
ATTGAAGCTTTGTTCACTGA+TGG 0.459805 5_1:-57782479 Msa0739470:CDS
AAGCCATCTCCAATTATGGC+TGG 0.460623 5_1:-57781490 Msa0739470:CDS
GTCGTGGGACTTTCTTGGAC+TGG 0.470096 5_1:-57784221 Msa0739470:CDS
TTGCCGAATATTGTTACATC+AGG 0.471070 5_1:+57782680 None:intergenic
TTGGAGAAAAGAAAACCTTT+CGG 0.472321 5_1:-57780123 Msa0739470:CDS
TTTCTCTTGATTCTGCTTGG+TGG 0.474583 5_1:-57784183 Msa0739470:CDS
GTAGACATATATTGTATACT+TGG 0.475700 5_1:-57784661 Msa0739470:intron
TCTTGATTCTGCTTGGTGGA+AGG 0.479653 5_1:-57784179 Msa0739470:CDS
ACTCGTACCGTCACAAATGT+TGG 0.481576 5_1:-57780232 Msa0739470:CDS
CTTAGATCATAAACAAGTCC+TGG 0.482949 5_1:+57780418 None:intergenic
CGAGTAACGTTTATAAGGTT+CGG 0.483106 5_1:+57780250 None:intergenic
ACATAACATAGGAATGTGTT+AGG 0.483110 5_1:+57782851 None:intergenic
CAGCCTGACATAACTGCTCC+TGG 0.483975 5_1:-57780930 Msa0739470:CDS
ACAATATTCGGCAACGGTAA+CGG 0.486416 5_1:-57782671 Msa0739470:CDS
TCCATACTCGCACCAGGTAA+AGG 0.493363 5_1:+57781779 None:intergenic
CGATTATACACAGTAATTGA+AGG 0.493869 5_1:+57780277 None:intergenic
TATAGTTTGTCACATAACAT+AGG 0.494734 5_1:+57782840 None:intergenic
TCACTGATGGAATTTCAATT+GGG 0.496395 5_1:-57782466 Msa0739470:CDS
TGCTCCTGGAGTGAACATAT+TGG 0.499041 5_1:-57780916 Msa0739470:CDS
GGAATGATGGACCTGCTCAT+AGG 0.501150 5_1:-57782397 Msa0739470:CDS
GCTGCTCTTGCAGGAGCAGT+AGG 0.501362 5_1:-57781857 Msa0739470:CDS
ACTTGATCCTACCAAAGTAA+AGG 0.503049 5_1:-57781939 Msa0739470:CDS
GTGATCAATGATGAGAAAAG+TGG 0.505278 5_1:-57781827 Msa0739470:CDS
TGTCCAGAACCATATTCAAA+TGG 0.505775 5_1:+57780466 None:intergenic
CTTAGTAAAGGCTTACCATC+AGG 0.508204 5_1:-57782168 Msa0739470:CDS
TGTATTGAAGAATGTTCTGC+TGG 0.508953 5_1:-57779870 Msa0739470:three_prime_UTR
TTGTCGTTGTTTGTTCTGCT+GGG 0.509421 5_1:-57782418 Msa0739470:CDS
ATCTTTCCCTTTACTTTGGT+AGG 0.511771 5_1:+57781932 None:intergenic
GTCACGTGCTGTGAGGTTTG+AGG 0.515710 5_1:+57782754 None:intergenic
TGGTAAGCCTTTACTAAGAC+TGG 0.517145 5_1:+57782173 None:intergenic
CAGGGTGCCAGTCTTAGTAA+AGG 0.519655 5_1:-57782180 Msa0739470:CDS
CTCGTACCGTCACAAATGTT+GGG 0.521038 5_1:-57780231 Msa0739470:CDS
TAGACATATATTGTATACTT+GGG 0.521854 5_1:-57784660 Msa0739470:CDS
AACGGTAACGGCACAGCGAA+AGG 0.522680 5_1:-57782659 Msa0739470:CDS
TTTGATCAAGCTATATATGA+TGG 0.524554 5_1:-57782545 Msa0739470:CDS
TGTTGGTCAAAGACAGATGC+AGG 0.529348 5_1:-57782599 Msa0739470:CDS
ATAGCAGCTGGGCTCCAACT+AGG 0.530211 5_1:+57780759 None:intergenic
ACTCCAGGAGCAGTTATGTC+AGG 0.531162 5_1:+57780927 None:intergenic
CAGTAATTGAAGGATAATTG+AGG 0.532746 5_1:+57780287 None:intergenic
GCTGAGCCTCATCCTTTACC+TGG 0.535200 5_1:-57781791 Msa0739470:CDS
TAGGATGCTACACGTGCTCT+AGG 0.537953 5_1:+57782629 None:intergenic
GTGATTTCAACTTCTTTGGG+TGG 0.540742 5_1:-57782515 Msa0739470:CDS
GTATCTGATGGTAGATTCGA+TGG 0.541870 5_1:+57780870 None:intergenic
CCTGGATCCATTGCAAGGTT+AGG 0.548244 5_1:+57780436 None:intergenic
GCACGTGACTTTATTGGCCA+TGG 0.550564 5_1:-57782740 Msa0739470:CDS
TTTGTAACACTCCTATGAGC+AGG 0.552065 5_1:+57782386 None:intergenic
ACACACTGATGCCCTTAGAA+AGG 0.552985 5_1:-57784799 Msa0739470:intron
TACTTGCTTCAATCTTAGGA+AGG 0.554717 5_1:-57784569 Msa0739470:intron
AATATAAATTGCACACTACA+AGG 0.554754 5_1:-57784243 Msa0739470:CDS
TGCAGCTAGTACAATTGATA+GGG 0.556954 5_1:-57782339 Msa0739470:CDS
TTGATAATGTGTGTGTGCCA+TGG 0.557883 5_1:+57782723 None:intergenic
ATTAATGGTTGCACTGCACT+AGG 0.559723 5_1:+57781451 None:intergenic
TAAGATACCGGTAGTCATGA+TGG 0.560336 5_1:+57780728 None:intergenic
GCAGCCAATATGTTCACTCC+AGG 0.562565 5_1:+57780912 None:intergenic
AACCTTTCGGATAATTCTAG+AGG 0.563782 5_1:-57780110 Msa0739470:CDS
TGCACTGCTTGAAGATGAAG+AGG 0.564011 5_1:-57784410 Msa0739470:CDS
GTCTCCTAGCACATATGTTG+TGG 0.564438 5_1:-57780209 Msa0739470:CDS
ATTTGGTGAAGATACAATCA+TGG 0.565020 5_1:-57784152 Msa0739470:CDS
AGCCATCTCCAATTATGGCT+GGG 0.565576 5_1:-57781489 Msa0739470:CDS
CTCGCACCAGGTAAAGGATG+AGG 0.568220 5_1:+57781785 None:intergenic
GCACATGCTTACCTTTCTAA+GGG 0.568241 5_1:+57784788 None:intergenic
ATTTCCACAACATATGTGCT+AGG 0.568399 5_1:+57780205 None:intergenic
CACACATTATCAACAGCAGC+AGG 0.573163 5_1:-57782713 Msa0739470:CDS
AATTGCACACTACAAGGTCG+TGG 0.575474 5_1:-57784237 Msa0739470:CDS
AAATCTGCCATCATGACTAC+CGG 0.576826 5_1:-57780735 Msa0739470:intron
AGAACTTTAATAAATTGTGA+CGG 0.588207 5_1:+57780356 None:intergenic
AACCCAGCCATAATTGGAGA+TGG 0.588591 5_1:+57781487 None:intergenic
TGGCTAACTCAAGATCATCA+AGG 0.591215 5_1:+57784610 None:intergenic
TGCCTCTAGAATTATCCGAA+AGG 0.595454 5_1:+57780108 None:intergenic
TGATGGTAGATTCGATGGAC+TGG 0.597441 5_1:+57780875 None:intergenic
TATTCAGCCTAACCTTGCAA+TGG 0.600414 5_1:-57780443 Msa0739470:CDS
TTGGCATCCATACTCGCACC+AGG 0.604844 5_1:+57781773 None:intergenic
GGAATGCGGCGTGTATCTGA+TGG 0.608485 5_1:+57780858 None:intergenic
TAGCATCCTACAAAGTATGT+TGG 0.610569 5_1:-57782616 Msa0739470:CDS
TGGTAGATTCGATGGACTGG+TGG 0.611336 5_1:+57780878 None:intergenic
GAAACTACATCTATTGCTCA+AGG 0.612659 5_1:-57781887 Msa0739470:CDS
CAAGTCCTGGATCCATTGCA+AGG 0.614140 5_1:+57780431 None:intergenic
GGCTAACTCAAGATCATCAA+GGG 0.615881 5_1:+57784611 None:intergenic
TACTTGGGAGGACATTCTCA+TGG 0.617129 5_1:-57784645 Msa0739470:CDS
GCAATAGGTATGCCTCCTCA+TGG 0.618674 5_1:-57780088 Msa0739470:CDS
TAATAGCCATGAGAAGGCAA+AGG 0.623516 5_1:-57784476 Msa0739470:intron
TCAATTACTGTGTATAATCG+AGG 0.623863 5_1:-57780274 Msa0739470:CDS
AACTCAAGATCATCAAGGGA+GGG 0.624343 5_1:+57784615 None:intergenic
ACATATATTGTATACTTGGG+AGG 0.638598 5_1:-57784657 Msa0739470:CDS
ATTGCACACTACAAGGTCGT+GGG 0.639982 5_1:-57784236 Msa0739470:CDS
ATTCCTTACAATCTGCAACA+AGG 0.647427 5_1:-57780840 Msa0739470:CDS
GTGTTACAAATATTGCACCT+TGG 0.655575 5_1:-57782373 Msa0739470:CDS
AATGTACTACTATTGAACAA+TGG 0.655908 5_1:-57779834 Msa0739470:three_prime_UTR
GTTGCAGATTGTAAGGAATG+CGG 0.656336 5_1:+57780844 None:intergenic
TGGCAGATTTGATAGCAGCT+GGG 0.656811 5_1:+57780748 None:intergenic
GATGTAACAATATTCGGCAA+CGG 0.657589 5_1:-57782677 Msa0739470:CDS
TAACTCAAGATCATCAAGGG+AGG 0.663086 5_1:+57784614 None:intergenic
AGGAGACCCAACATTTGTGA+CGG 0.664789 5_1:+57780225 None:intergenic
CAATAAAGTCACGTGCTGTG+AGG 0.667759 5_1:+57782747 None:intergenic
GGTAACGGCACAGCGAAAGG+TGG 0.679426 5_1:-57782656 Msa0739470:CDS
AATACTGGAAAACCATGAGG+AGG 0.686042 5_1:+57780076 None:intergenic
CCAGCAATGCCAGCAACATG+AGG 0.694690 5_1:+57780801 None:intergenic
CTATAGGACTAGTTACTCTG+TGG 0.701819 5_1:+57780026 None:intergenic
CCAAATACTGGAAAACCATG+AGG 0.707398 5_1:+57780073 None:intergenic
GCTGCAACAGTGAAAGACCA+AGG 0.714415 5_1:+57782356 None:intergenic
TGGTCAAAGACAGATGCAGG+TGG 0.723373 5_1:-57782596 Msa0739470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATTTAAAAGCAAAATT+TGG + chr5_1:57779968-57779987 None:intergenic 10.0%
!!! TATACGTTTATAATTAATTT+TGG + chr5_1:57780743-57780762 None:intergenic 10.0%
!!! TTTACATAAACTTATTTTAT+TGG - chr5_1:57782468-57782487 Msa0739470:CDS 10.0%
!!! AAAAAAATAGTATTTGTTAT+TGG - chr5_1:57782641-57782660 Msa0739470:CDS 10.0%
!! ATTTATTTATATTATAATGC+AGG - chr5_1:57783122-57783141 Msa0739470:intron 10.0%
!!! AAACATGTTTTAATTAGAAA+AGG + chr5_1:57781012-57781031 None:intergenic 15.0%
!! TTTCATTAAATAATGAGAAA+GGG + chr5_1:57781054-57781073 None:intergenic 15.0%
!!! TTTTCATTAAATAATGAGAA+AGG + chr5_1:57781055-57781074 None:intergenic 15.0%
!!! ATTTGATATATTTTCTTTGA+TGG + chr5_1:57782539-57782558 None:intergenic 15.0%
!!! TTTTTTTTTAAGCAAGTTTA+GGG + chr5_1:57782627-57782646 None:intergenic 15.0%
!!! TTTTTTTTTTAAGCAAGTTT+AGG + chr5_1:57782628-57782647 None:intergenic 15.0%
!!! CTAAATTTTGTTTTTGATTT+AGG + chr5_1:57784039-57784058 None:intergenic 15.0%
!! TAGACATATATTGTATACTT+GGG - chr5_1:57780020-57780039 Msa0739470:CDS 20.0%
!! TAAATCATAATGTGAATTTG+TGG + chr5_1:57780093-57780112 None:intergenic 20.0%
!! TCTTACAATAAGCATATAAA+TGG - chr5_1:57780241-57780260 Msa0739470:CDS 20.0%
!! ACATTATTTATCATACTCTA+TGG - chr5_1:57780708-57780727 Msa0739470:intron 20.0%
!! ATTTATGAAGATAAGAAGTT+GGG + chr5_1:57780978-57780997 None:intergenic 20.0%
!! TATTTATGAAGATAAGAAGT+TGG + chr5_1:57780979-57780998 None:intergenic 20.0%
!!! TGAAATAAAGTACTGATATT+TGG + chr5_1:57781087-57781106 None:intergenic 20.0%
!!! ATATCTTTTTTAAGTGTGTT+TGG - chr5_1:57781342-57781361 Msa0739470:intron 20.0%
!! AAGTTATTGATAAACATCTA+CGG - chr5_1:57781716-57781735 Msa0739470:intron 20.0%
!! TAAACAAAGACAATGAATAT+AGG - chr5_1:57781769-57781788 Msa0739470:intron 20.0%
!! ACAAACTATAGAAAACTAAT+TGG - chr5_1:57781853-57781872 Msa0739470:CDS 20.0%
!!! TTTTGTTACCAATAGAAATA+TGG + chr5_1:57782377-57782396 None:intergenic 20.0%
!! TGGTAACAAAAATTACATAA+AGG - chr5_1:57782386-57782405 Msa0739470:CDS 20.0%
!!! TAAAGGTATGAATAGTAATA+AGG - chr5_1:57782403-57782422 Msa0739470:CDS 20.0%
!! TATATTATAATGCAGGAAAA+TGG - chr5_1:57783129-57783148 Msa0739470:intron 20.0%
!! ATACTATATTACTACTTATG+TGG + chr5_1:57783377-57783396 None:intergenic 20.0%
!!! ATTAATCATCTTTGGTATTT+TGG - chr5_1:57783585-57783604 Msa0739470:intron 20.0%
!!! TTGTTTTTGATTTAGGTAAA+AGG + chr5_1:57784032-57784051 None:intergenic 20.0%
!! AGAACTTTAATAAATTGTGA+CGG + chr5_1:57784327-57784346 None:intergenic 20.0%
!!! AGTTTGTGTTTTTTTACTAA+TGG - chr5_1:57784778-57784797 Msa0739470:intron 20.0%
!! GATAGAAAAAGTTTGGTAAT+AGG + chr5_1:57779831-57779850 None:intergenic 25.0%
! GAATGATGATAGAAAAAGTT+TGG + chr5_1:57779838-57779857 None:intergenic 25.0%
! TGTATGAATGAGTATAAGAA+GGG + chr5_1:57779923-57779942 None:intergenic 25.0%
! TTTGGATATTAAGACTATAG+AGG + chr5_1:57779950-57779969 None:intergenic 25.0%
! GTAGACATATATTGTATACT+TGG - chr5_1:57780019-57780038 Msa0739470:CDS 25.0%
! AATATAAATTGCACACTACA+AGG - chr5_1:57780437-57780456 Msa0739470:CDS 25.0%
! AGATGTAAAATAGAAGAACT+TGG - chr5_1:57780621-57780640 Msa0739470:intron 25.0%
! TTGCAAAATGTTGTATTTGA+AGG + chr5_1:57780900-57780919 None:intergenic 25.0%
! TTAGAGTAAGAAATAAATGC+TGG + chr5_1:57780950-57780969 None:intergenic 25.0%
! TTTATGAAGATAAGAAGTTG+GGG + chr5_1:57780977-57780996 None:intergenic 25.0%
! AATTTATTCCATGACTAAGA+AGG + chr5_1:57781117-57781136 None:intergenic 25.0%
!!! AGCATTGATATTGTATAGTT+GGG + chr5_1:57781233-57781252 None:intergenic 25.0%
!! TTTTCAGCTTAAACACAAAT+TGG + chr5_1:57781509-57781528 None:intergenic 25.0%
! AATTTGTGTTTAAGCTGAAA+AGG - chr5_1:57781508-57781527 Msa0739470:intron 25.0%
!! TATAGTTTGTCACATAACAT+AGG + chr5_1:57781843-57781862 None:intergenic 25.0%
! TTTGATCAAGCTATATATGA+TGG - chr5_1:57782135-57782154 Msa0739470:CDS 25.0%
!! TTTGTTAGCCATATTTCTAT+TGG - chr5_1:57782366-57782385 Msa0739470:CDS 25.0%
!! ATTTTATTGGATCGTATTTC+AGG - chr5_1:57782481-57782500 Msa0739470:CDS 25.0%
!! TTTTATTGGATCGTATTTCA+GGG - chr5_1:57782482-57782501 Msa0739470:CDS 25.0%
! TAATATCTTTCCCTTTACTT+TGG + chr5_1:57782755-57782774 None:intergenic 25.0%
! TTGTATACCTTGAGTATTAA+TGG + chr5_1:57783247-57783266 None:intergenic 25.0%
! ATCAGTTCGATAAAAAAACA+AGG - chr5_1:57783434-57783453 Msa0739470:intron 25.0%
!!! GAAATATAAGTTGAGTTTTG+AGG + chr5_1:57783476-57783495 None:intergenic 25.0%
! TGAATGTAGGATTGAAAAAT+AGG + chr5_1:57783677-57783696 None:intergenic 25.0%
!!! ATATTGATTTGCTAAGATAC+CGG + chr5_1:57783967-57783986 None:intergenic 25.0%
!! TTTTCAATGTTGTAAAACTC+AGG + chr5_1:57784373-57784392 None:intergenic 25.0%
! TCAACAACTTGAAGAATTTA+AGG - chr5_1:57784498-57784517 Msa0739470:intron 25.0%
! TCATTGACATTTAAGGAAAT+TGG - chr5_1:57784538-57784557 Msa0739470:intron 25.0%
! AATGTACTACTATTGAACAA+TGG - chr5_1:57784846-57784865 Msa0739470:CDS 25.0%
CTGTATGAATGAGTATAAGA+AGG + chr5_1:57779924-57779943 None:intergenic 30.0%
ACATATATTGTATACTTGGG+AGG - chr5_1:57780023-57780042 Msa0739470:CDS 30.0%
GATTTACTTGCTTCAATCTT+AGG - chr5_1:57780107-57780126 Msa0739470:CDS 30.0%
! TTTTTGTAATAGCCATGAGA+AGG - chr5_1:57780198-57780217 Msa0739470:CDS 30.0%
CAACAATTACTTCTTTACCA+TGG - chr5_1:57780313-57780332 Msa0739470:CDS 30.0%
AAAATGACTCAACAAATCCA+TGG + chr5_1:57780333-57780352 None:intergenic 30.0%
! ATTTGGTGAAGATACAATCA+TGG - chr5_1:57780528-57780547 Msa0739470:CDS 30.0%
ATCATGGCTAATTTAGATTC+TGG - chr5_1:57780544-57780563 Msa0739470:intron 30.0%
TGTGCAACATATCATTGAAT+TGG + chr5_1:57780673-57780692 None:intergenic 30.0%
! CAAATACAACATTTTGCAAC+AGG - chr5_1:57780901-57780920 Msa0739470:CDS 30.0%
ACTATATTCCTTCTTAGTCA+TGG - chr5_1:57781106-57781125 Msa0739470:intron 30.0%
TTGATTCTCATACTTCAACT+TGG - chr5_1:57781198-57781217 Msa0739470:intron 30.0%
TGATTCTCATACTTCAACTT+GGG - chr5_1:57781199-57781218 Msa0739470:intron 30.0%
!! GAGCATTGATATTGTATAGT+TGG + chr5_1:57781234-57781253 None:intergenic 30.0%
!! AGACTCATCTCTTGTTATTT+CGG + chr5_1:57781285-57781304 None:intergenic 30.0%
ATTAACACTAAGTGCATGTT+TGG + chr5_1:57781463-57781482 None:intergenic 30.0%
GTGTTAATTAAGACTCACAT+TGG - chr5_1:57781475-57781494 Msa0739470:CDS 30.0%
AAGCTGAAAAGGTTTAACAA+CGG - chr5_1:57781519-57781538 Msa0739470:intron 30.0%
ACATAACATAGGAATGTGTT+AGG + chr5_1:57781832-57781851 None:intergenic 30.0%
! CATATTGTGATTCGTAGTTT+TGG + chr5_1:57781894-57781913 None:intergenic 30.0%
CAAAACTACGAATCACAATA+TGG - chr5_1:57781892-57781911 Msa0739470:CDS 30.0%
TCACCTGATGTAACAATATT+CGG - chr5_1:57781997-57782016 Msa0739470:intron 30.0%
TGATGTGATTTCAACTTCTT+TGG - chr5_1:57782161-57782180 Msa0739470:CDS 30.0%
GATGTGATTTCAACTTCTTT+GGG - chr5_1:57782162-57782181 Msa0739470:CDS 30.0%
GTGAACAAAGCTTCAATATA+TGG + chr5_1:57782198-57782217 None:intergenic 30.0%
TTCACTGATGGAATTTCAAT+TGG - chr5_1:57782213-57782232 Msa0739470:intron 30.0%
TCACTGATGGAATTTCAATT+GGG - chr5_1:57782214-57782233 Msa0739470:intron 30.0%
GTTTAAAGACTATGCACTAA+CGG - chr5_1:57783010-57783029 Msa0739470:intron 30.0%
! TCTGAAGCAAAAACATATAC+AGG - chr5_1:57783163-57783182 Msa0739470:intron 30.0%
ATTAAAGCCATCTCCAATTA+TGG - chr5_1:57783186-57783205 Msa0739470:intron 30.0%
!! AAAATTTCTAGTTGCGTCTA+CGG - chr5_1:57783292-57783311 Msa0739470:intron 30.0%
ATATTACTACTTATGTGGAG+CGG + chr5_1:57783372-57783391 None:intergenic 30.0%
!!! TTTTTTCAAATCAACACCGA+CGG - chr5_1:57783508-57783527 Msa0739470:intron 30.0%
! AGGAACCTAAACTTTTATTG+CGG - chr5_1:57783558-57783577 Msa0739470:intron 30.0%
ATGTAGGATTGAAAAATAGG+TGG + chr5_1:57783674-57783693 None:intergenic 30.0%
ACAAAATAAGTGAAGAAGAG+TGG + chr5_1:57783704-57783723 None:intergenic 30.0%
!! TCAAAGATCACTCACTTTTA+AGG - chr5_1:57784111-57784130 Msa0739470:intron 30.0%
!! CAAAGATCACTCACTTTTAA+GGG - chr5_1:57784112-57784131 Msa0739470:intron 30.0%
CAGTAATTGAAGGATAATTG+AGG + chr5_1:57784396-57784415 None:intergenic 30.0%
CGATTATACACAGTAATTGA+AGG + chr5_1:57784406-57784425 None:intergenic 30.0%
TCAATTACTGTGTATAATCG+AGG - chr5_1:57784406-57784425 Msa0739470:CDS 30.0%
ACCAAGTTCATTGACATTTA+AGG - chr5_1:57784531-57784550 Msa0739470:intron 30.0%
TCCTTAAATGTCAATGAACT+TGG + chr5_1:57784535-57784554 None:intergenic 30.0%
TTGGAGAAAAGAAAACCTTT+CGG - chr5_1:57784557-57784576 Msa0739470:intron 30.0%
TATGTGTGTAATTGTGCTTA+TGG - chr5_1:57784737-57784756 Msa0739470:intron 30.0%
TACTTGCTTCAATCTTAGGA+AGG - chr5_1:57780111-57780130 Msa0739470:CDS 35.0%
! TTTCTTGGACTGGAAAAAGA+TGG - chr5_1:57780469-57780488 Msa0739470:CDS 35.0%
GAATTTCTCTTGATTCTGCT+TGG - chr5_1:57780494-57780513 Msa0739470:CDS 35.0%
!! GACATGTTTGTTGTTGAAAC+AGG - chr5_1:57780774-57780793 Msa0739470:CDS 35.0%
GATTCTCATACTTCAACTTG+GGG - chr5_1:57781200-57781219 Msa0739470:intron 35.0%
AATGCTCTACCAAATACACA+AGG - chr5_1:57781247-57781266 Msa0739470:intron 35.0%
AACTAAGGTCCTTGTGTATT+TGG + chr5_1:57781259-57781278 None:intergenic 35.0%
!! TTGTTATTTCGGGACAACTA+AGG + chr5_1:57781274-57781293 None:intergenic 35.0%
!! GACTCATCTCTTGTTATTTC+GGG + chr5_1:57781284-57781303 None:intergenic 35.0%
ACGGAGAGACATAAAATGTA+AGG - chr5_1:57781538-57781557 Msa0739470:intron 35.0%
TTGCCGAATATTGTTACATC+AGG + chr5_1:57782003-57782022 None:intergenic 35.0%
GATGTAACAATATTCGGCAA+CGG - chr5_1:57782003-57782022 Msa0739470:intron 35.0%
TAGCATCCTACAAAGTATGT+TGG - chr5_1:57782064-57782083 Msa0739470:intron 35.0%
CTTTGACCAACATACTTTGT+AGG + chr5_1:57782073-57782092 None:intergenic 35.0%
!! ATTGAAGCTTTGTTCACTGA+TGG - chr5_1:57782201-57782220 Msa0739470:intron 35.0%
GTGTTACAAATATTGCACCT+TGG - chr5_1:57782307-57782326 Msa0739470:CDS 35.0%
TTGCAGCTAGTACAATTGAT+AGG - chr5_1:57782340-57782359 Msa0739470:CDS 35.0%
TGCAGCTAGTACAATTGATA+GGG - chr5_1:57782341-57782360 Msa0739470:CDS 35.0%
!! ATTTTCTTTGATGGACCTGA+TGG + chr5_1:57782530-57782549 None:intergenic 35.0%
ACTTGATCCTACCAAAGTAA+AGG - chr5_1:57782741-57782760 Msa0739470:CDS 35.0%
CTTGATCCTACCAAAGTAAA+GGG - chr5_1:57782742-57782761 Msa0739470:CDS 35.0%
ATCTTTCCCTTTACTTTGGT+AGG + chr5_1:57782751-57782770 None:intergenic 35.0%
GAAACTACATCTATTGCTCA+AGG - chr5_1:57782793-57782812 Msa0739470:CDS 35.0%
GTGATCAATGATGAGAAAAG+TGG - chr5_1:57782853-57782872 Msa0739470:CDS 35.0%
ATCAATATCCTCATCCTCAT+TGG + chr5_1:57782929-57782948 None:intergenic 35.0%
! GTACTGATGAAAACATTACC+AGG - chr5_1:57782974-57782993 Msa0739470:intron 35.0%
TAAACTCGTATGAGTTTACC+TGG + chr5_1:57782995-57783014 None:intergenic 35.0%
TAGCGAAATCTGATTGAAGA+CGG + chr5_1:57783053-57783072 None:intergenic 35.0%
AGTGCAACCATTAATACTCA+AGG - chr5_1:57783237-57783256 Msa0739470:intron 35.0%
TGTTGCCGCAATAAAAGTTT+AGG + chr5_1:57783566-57783585 None:intergenic 35.0%
ATTCCTTACAATCTGCAACA+AGG - chr5_1:57783840-57783859 Msa0739470:intron 35.0%
! GACTTTTCTACATATACTGC+AGG + chr5_1:57784093-57784112 None:intergenic 35.0%
ATAGCGACTCCATTTGAATA+TGG - chr5_1:57784205-57784224 Msa0739470:CDS 35.0%
ACTCCATTTGAATATGGTTC+TGG - chr5_1:57784211-57784230 Msa0739470:CDS 35.0%
TGTCCAGAACCATATTCAAA+TGG + chr5_1:57784217-57784236 None:intergenic 35.0%
CTTAGATCATAAACAAGTCC+TGG + chr5_1:57784265-57784284 None:intergenic 35.0%
CGAGTAACGTTTATAAGGTT+CGG + chr5_1:57784433-57784452 None:intergenic 35.0%
ATTTCCACAACATATGTGCT+AGG + chr5_1:57784478-57784497 None:intergenic 35.0%
AACCTTTCGGATAATTCTAG+AGG - chr5_1:57784570-57784589 Msa0739470:CDS 35.0%
! CTCATGGTTTTCCAGTATTT+GGG - chr5_1:57784608-57784627 Msa0739470:CDS 35.0%
CAAGTCAATTTCCCAAATAC+TGG + chr5_1:57784622-57784641 None:intergenic 35.0%
CAGTATTTGGGAAATTGACT+TGG - chr5_1:57784620-57784639 Msa0739470:CDS 35.0%
TGAGCTTACAAGACTACTAT+AGG + chr5_1:57784673-57784692 None:intergenic 35.0%
TAAGCTCATGAATCTCTCTA+AGG - chr5_1:57784685-57784704 Msa0739470:intron 35.0%
TGTATTGAAGAATGTTCTGC+TGG - chr5_1:57784810-57784829 Msa0739470:CDS 35.0%
GCACATGCTTACCTTTCTAA+GGG + chr5_1:57779895-57779914 None:intergenic 40.0%
AGCACATGCTTACCTTTCTA+AGG + chr5_1:57779896-57779915 None:intergenic 40.0%
AACTCAAGATCATCAAGGGA+GGG + chr5_1:57780068-57780087 None:intergenic 40.0%
TAACTCAAGATCATCAAGGG+AGG + chr5_1:57780069-57780088 None:intergenic 40.0%
GGCTAACTCAAGATCATCAA+GGG + chr5_1:57780072-57780091 None:intergenic 40.0%
TGGCTAACTCAAGATCATCA+AGG + chr5_1:57780073-57780092 None:intergenic 40.0%
TAATAGCCATGAGAAGGCAA+AGG - chr5_1:57780204-57780223 Msa0739470:CDS 40.0%
TTTCTCTTGATTCTGCTTGG+TGG - chr5_1:57780497-57780516 Msa0739470:CDS 40.0%
! TTGTTGTTGAAACAGGCGTT+TGG - chr5_1:57780781-57780800 Msa0739470:CDS 40.0%
CCACTGAAACTTTCATGTTC+CGG + chr5_1:57780807-57780826 None:intergenic 40.0%
CATGAAAGTTTCAGTGGCAT+TGG - chr5_1:57780810-57780829 Msa0739470:CDS 40.0%
! AGTTTCAGTGGCATTGGATA+TGG - chr5_1:57780816-57780835 Msa0739470:CDS 40.0%
ATGGTCAAGTGCCATCAAAA+TGG - chr5_1:57780835-57780854 Msa0739470:CDS 40.0%
!! AACATCTACGGTGTTGTGTA+TGG - chr5_1:57781728-57781747 Msa0739470:intron 40.0%
!! TTGATAATGTGTGTGTGCCA+TGG + chr5_1:57781960-57781979 None:intergenic 40.0%
ACAATATTCGGCAACGGTAA+CGG - chr5_1:57782009-57782028 Msa0739470:intron 40.0%
GTGATTTCAACTTCTTTGGG+TGG - chr5_1:57782165-57782184 Msa0739470:CDS 40.0%
TTGTCGTTGTTTGTTCTGCT+GGG - chr5_1:57782262-57782281 Msa0739470:intron 40.0%
TTTGTAACACTCCTATGAGC+AGG + chr5_1:57782297-57782316 None:intergenic 40.0%
TGGTAAGCCTTTACTAAGAC+TGG + chr5_1:57782510-57782529 None:intergenic 40.0%
CTTAGTAAAGGCTTACCATC+AGG - chr5_1:57782512-57782531 Msa0739470:CDS 40.0%
TTGGTAGGATCAAGTGTTCT+AGG + chr5_1:57782736-57782755 None:intergenic 40.0%
GATGAAAACCCAGCCATAAT+TGG + chr5_1:57783202-57783221 None:intergenic 40.0%
! TTATGGCTGGGTTTTCATCT+AGG - chr5_1:57783203-57783222 Msa0739470:intron 40.0%
! TATGGCTGGGTTTTCATCTA+GGG - chr5_1:57783204-57783223 Msa0739470:intron 40.0%
ATTAATGGTTGCACTGCACT+AGG + chr5_1:57783232-57783251 None:intergenic 40.0%
AACTGAGATGATGTCCCAAT+CGG - chr5_1:57783410-57783429 Msa0739470:intron 40.0%
! TTATCGAACTGATGCCGATT+GGG + chr5_1:57783427-57783446 None:intergenic 40.0%
TTTATCGAACTGATGCCGAT+TGG + chr5_1:57783428-57783447 None:intergenic 40.0%
GCGGCAACATTAATCATCTT+TGG - chr5_1:57783577-57783596 Msa0739470:intron 40.0%
ACTTCAATTCTCTACCCTAG+TGG - chr5_1:57783648-57783667 Msa0739470:intron 40.0%
TGAAAAATAGGTGGCCACTA+GGG + chr5_1:57783665-57783684 None:intergenic 40.0%
TTGAAAAATAGGTGGCCACT+AGG + chr5_1:57783666-57783685 None:intergenic 40.0%
GAAGAGTGGACATTGAATGT+AGG + chr5_1:57783690-57783709 None:intergenic 40.0%
GTATCTGATGGTAGATTCGA+TGG + chr5_1:57783813-57783832 None:intergenic 40.0%
GTTGCAGATTGTAAGGAATG+CGG + chr5_1:57783839-57783858 None:intergenic 40.0%
GTTCCTTGTTGCAGATTGTA+AGG + chr5_1:57783846-57783865 None:intergenic 40.0%
TCAAGACACTTCATCCTAGT+TGG - chr5_1:57783907-57783926 Msa0739470:intron 40.0%
AAATCTGCCATCATGACTAC+CGG - chr5_1:57783945-57783964 Msa0739470:intron 40.0%
TAAGATACCGGTAGTCATGA+TGG + chr5_1:57783955-57783974 None:intergenic 40.0%
TATTCAGCCTAACCTTGCAA+TGG - chr5_1:57784237-57784256 Msa0739470:CDS 40.0%
CGGTACGAGTAACGTTTATA+AGG + chr5_1:57784438-57784457 None:intergenic 40.0%
!! TGCCTCTAGAATTATCCGAA+AGG + chr5_1:57784575-57784594 None:intergenic 40.0%
! CGGATAATTCTAGAGGCAAT+AGG - chr5_1:57784577-57784596 Msa0739470:CDS 40.0%
AATACTGGAAAACCATGAGG+AGG + chr5_1:57784607-57784626 None:intergenic 40.0%
CCAAATACTGGAAAACCATG+AGG + chr5_1:57784610-57784629 None:intergenic 40.0%
! CCTCATGGTTTTCCAGTATT+TGG - chr5_1:57784607-57784626 Msa0739470:CDS 40.0%
!! GGGAAATTGACTTGGACAAA+TGG - chr5_1:57784628-57784647 Msa0739470:CDS 40.0%
!! CTATAGGACTAGTTACTCTG+TGG + chr5_1:57784657-57784676 None:intergenic 40.0%
ACACACTGATGCCCTTAGAA+AGG - chr5_1:57779881-57779900 Msa0739470:three_prime_UTR 45.0%
TACTTGGGAGGACATTCTCA+TGG - chr5_1:57780035-57780054 Msa0739470:CDS 45.0%
AGATCATCAAGGGAGGGATT+TGG + chr5_1:57780062-57780081 None:intergenic 45.0%
CTGTTTCCTTTGCCTTCTCA+TGG + chr5_1:57780213-57780232 None:intergenic 45.0%
TGCACTGCTTGAAGATGAAG+AGG - chr5_1:57780270-57780289 Msa0739470:CDS 45.0%
AATTGCACACTACAAGGTCG+TGG - chr5_1:57780443-57780462 Msa0739470:CDS 45.0%
ATTGCACACTACAAGGTCGT+GGG - chr5_1:57780444-57780463 Msa0739470:CDS 45.0%
! CTTGGACTGGAAAAAGATGG+AGG - chr5_1:57780472-57780491 Msa0739470:CDS 45.0%
! TCTTGATTCTGCTTGGTGGA+AGG - chr5_1:57780501-57780520 Msa0739470:CDS 45.0%
CCGGAACATGAAAGTTTCAG+TGG - chr5_1:57780804-57780823 Msa0739470:CDS 45.0%
AAGTGCCATCAAAATGGCGT+GGG - chr5_1:57780841-57780860 Msa0739470:CDS 45.0%
CATCAAAATGGCGTGGGAAT+GGG - chr5_1:57780847-57780866 Msa0739470:CDS 45.0%
ATCAAAATGGCGTGGGAATG+GGG - chr5_1:57780848-57780867 Msa0739470:CDS 45.0%
CAATAAAGTCACGTGCTGTG+AGG + chr5_1:57781936-57781955 None:intergenic 45.0%
CTCACAGCACGTGACTTTAT+TGG - chr5_1:57781934-57781953 Msa0739470:CDS 45.0%
CACACATTATCAACAGCAGC+AGG - chr5_1:57781967-57781986 Msa0739470:intron 45.0%
TGTTGGTCAAAGACAGATGC+AGG - chr5_1:57782081-57782100 Msa0739470:intron 45.0%
GTTGTCGTTGTTTGTTCTGC+TGG - chr5_1:57782261-57782280 Msa0739470:intron 45.0%
GTTTGTTCTGCTGGGAATGA+TGG - chr5_1:57782270-57782289 Msa0739470:intron 45.0%
TCTAGGCTTGCAAAAACGAC+TGG + chr5_1:57782719-57782738 None:intergenic 45.0%
TATGGATGCCAATGAGGATG+AGG - chr5_1:57782918-57782937 Msa0739470:intron 45.0%
AGGATATTGATGAGCGTGAG+TGG - chr5_1:57782938-57782957 Msa0739470:intron 45.0%
ATTGATGAGCGTGAGTGGTT+TGG - chr5_1:57782943-57782962 Msa0739470:intron 45.0%
AAGCCATCTCCAATTATGGC+TGG - chr5_1:57783190-57783209 Msa0739470:intron 45.0%
AGCCATCTCCAATTATGGCT+GGG - chr5_1:57783191-57783210 Msa0739470:intron 45.0%
AACCCAGCCATAATTGGAGA+TGG + chr5_1:57783196-57783215 None:intergenic 45.0%
! ATGGCTGGGTTTTCATCTAG+GGG - chr5_1:57783205-57783224 Msa0739470:intron 45.0%
TAGGTTCCTCCACATCCTTA+GGG + chr5_1:57783547-57783566 None:intergenic 45.0%
TTAGGTTCCTCCACATCCTT+AGG + chr5_1:57783548-57783567 None:intergenic 45.0%
TGCTCCTGGAGTGAACATAT+TGG - chr5_1:57783764-57783783 Msa0739470:intron 45.0%
TGATGGTAGATTCGATGGAC+TGG + chr5_1:57783808-57783827 None:intergenic 45.0%
ATGTCTTGTCCTCATGTTGC+TGG - chr5_1:57783870-57783889 Msa0739470:intron 45.0%
! TGGCAGATTTGATAGCAGCT+GGG + chr5_1:57783935-57783954 None:intergenic 45.0%
! ATGGCAGATTTGATAGCAGC+TGG + chr5_1:57783936-57783955 None:intergenic 45.0%
TTATCGAACGCGTCTCTGAT+TGG + chr5_1:57784184-57784203 None:intergenic 45.0%
ACTCGTACCGTCACAAATGT+TGG - chr5_1:57784448-57784467 Msa0739470:CDS 45.0%
CTCGTACCGTCACAAATGTT+GGG - chr5_1:57784449-57784468 Msa0739470:CDS 45.0%
AGGAGACCCAACATTTGTGA+CGG + chr5_1:57784458-57784477 None:intergenic 45.0%
GTCTCCTAGCACATATGTTG+TGG - chr5_1:57784471-57784490 Msa0739470:CDS 45.0%
ACAAGGTCGTGGGACTTTCT+TGG - chr5_1:57780454-57780473 Msa0739470:CDS 50.0%
! GCTTGGTGGAAGGCAAGATT+TGG - chr5_1:57780511-57780530 Msa0739470:CDS 50.0%
TGTTGAAACAGGCGTTTGGC+CGG - chr5_1:57780785-57780804 Msa0739470:CDS 50.0%
CAAGTGCCATCAAAATGGCG+TGG - chr5_1:57780840-57780859 Msa0739470:CDS 50.0%
!! CCATTCCCACGCCATTTTGA+TGG + chr5_1:57780849-57780868 None:intergenic 50.0%
CCATCAAAATGGCGTGGGAA+TGG - chr5_1:57780846-57780865 Msa0739470:CDS 50.0%
TCACGTGCTGTGAGGTTTGA+GGG + chr5_1:57781928-57781947 None:intergenic 50.0%
GCACGTGACTTTATTGGCCA+TGG - chr5_1:57781940-57781959 Msa0739470:CDS 50.0%
TAGGATGCTACACGTGCTCT+AGG + chr5_1:57782054-57782073 None:intergenic 50.0%
TGGTCAAAGACAGATGCAGG+TGG - chr5_1:57782084-57782103 Msa0739470:intron 50.0%
!! GGAATGATGGACCTGCTCAT+AGG - chr5_1:57782283-57782302 Msa0739470:intron 50.0%
GCTGCAACAGTGAAAGACCA+AGG + chr5_1:57782327-57782346 None:intergenic 50.0%
! CAGGGTGCCAGTCTTAGTAA+AGG - chr5_1:57782500-57782519 Msa0739470:CDS 50.0%
TCCTTTACCTGGTGCGAGTA+TGG - chr5_1:57782900-57782919 Msa0739470:intron 50.0%
TCCATACTCGCACCAGGTAA+AGG + chr5_1:57782904-57782923 None:intergenic 50.0%
TGCGAGTATGGATGCCAATG+AGG - chr5_1:57782912-57782931 Msa0739470:intron 50.0%
! GAGCGTGAGTGGTTTGGAAA+AGG - chr5_1:57782949-57782968 Msa0739470:intron 50.0%
! CGTGAGTGGTTTGGAAAAGG+AGG - chr5_1:57782952-57782971 Msa0739470:intron 50.0%
! TTCTAGTTGCGTCTACGGTG+AGG - chr5_1:57783297-57783316 Msa0739470:intron 50.0%
ACTCCAGGAGCAGTTATGTC+AGG + chr5_1:57783756-57783775 None:intergenic 50.0%
GCAGCCAATATGTTCACTCC+AGG + chr5_1:57783771-57783790 None:intergenic 50.0%
!! TGGTAGATTCGATGGACTGG+TGG + chr5_1:57783805-57783824 None:intergenic 50.0%
CCTGGATCCATTGCAAGGTT+AGG + chr5_1:57784247-57784266 None:intergenic 50.0%
CCTAACCTTGCAATGGATCC+AGG - chr5_1:57784244-57784263 Msa0739470:CDS 50.0%
CAAGTCCTGGATCCATTGCA+AGG + chr5_1:57784252-57784271 None:intergenic 50.0%
GCAATAGGTATGCCTCCTCA+TGG - chr5_1:57784592-57784611 Msa0739470:CDS 50.0%
GTCGTGGGACTTTCTTGGAC+TGG - chr5_1:57780459-57780478 Msa0739470:CDS 55.0%
GTCACGTGCTGTGAGGTTTG+AGG + chr5_1:57781929-57781948 None:intergenic 55.0%
! AACGGTAACGGCACAGCGAA+AGG - chr5_1:57782021-57782040 Msa0739470:intron 55.0%
!! GGCTTTGAAGCTGCTCTTGC+AGG - chr5_1:57782814-57782833 Msa0739470:CDS 55.0%
GCTGAGCCTCATCCTTTACC+TGG - chr5_1:57782889-57782908 Msa0739470:intron 55.0%
CTCGCACCAGGTAAAGGATG+AGG + chr5_1:57782898-57782917 None:intergenic 55.0%
TTGGCATCCATACTCGCACC+AGG + chr5_1:57782910-57782929 None:intergenic 55.0%
GGATCACTGTCTCAGCCCTA+AGG - chr5_1:57783529-57783548 Msa0739470:intron 55.0%
CTGTCTCAGCCCTAAGGATG+TGG - chr5_1:57783535-57783554 Msa0739470:intron 55.0%
TCTCAGCCCTAAGGATGTGG+AGG - chr5_1:57783538-57783557 Msa0739470:intron 55.0%
CAGCCTGACATAACTGCTCC+TGG - chr5_1:57783750-57783769 Msa0739470:intron 55.0%
GGAATGCGGCGTGTATCTGA+TGG + chr5_1:57783825-57783844 None:intergenic 55.0%
CCAGCAATGCCAGCAACATG+AGG + chr5_1:57783882-57783901 None:intergenic 55.0%
CCTCATGTTGCTGGCATTGC+TGG - chr5_1:57783879-57783898 Msa0739470:intron 55.0%
ATAGCAGCTGGGCTCCAACT+AGG + chr5_1:57783924-57783943 None:intergenic 55.0%
! GGTAACGGCACAGCGAAAGG+TGG - chr5_1:57782024-57782043 Msa0739470:intron 60.0%
GCTGCTCTTGCAGGAGCAGT+AGG - chr5_1:57782823-57782842 Msa0739470:CDS 60.0%
GGGCTGAGACAGTGATCCGT+CGG + chr5_1:57783527-57783546 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 57779819 57784883 57779819 ID=Msa0739470;Name=Msa0739470
chr5_1 mRNA 57779819 57784883 57779819 ID=Msa0739470-mRNA-1;Parent=Msa0739470;Name=Msa0739470-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.44|0.4|1|1|1|10|196|712
chr5_1 exon 57779819 57780547 57779819 ID=Msa0739470-mRNA-1:exon:16422;Parent=Msa0739470-mRNA-1
chr5_1 exon 57780736 57780949 57780736 ID=Msa0739470-mRNA-1:exon:16421;Parent=Msa0739470-mRNA-1
chr5_1 exon 57781465 57781517 57781465 ID=Msa0739470-mRNA-1:exon:16420;Parent=Msa0739470-mRNA-1
chr5_1 exon 57781786 57781982 57781786 ID=Msa0739470-mRNA-1:exon:16419;Parent=Msa0739470-mRNA-1
chr5_1 exon 57782096 57782199 57782096 ID=Msa0739470-mRNA-1:exon:16418;Parent=Msa0739470-mRNA-1
chr5_1 exon 57782295 57782875 57782295 ID=Msa0739470-mRNA-1:exon:16417;Parent=Msa0739470-mRNA-1
chr5_1 exon 57784137 57784301 57784137 ID=Msa0739470-mRNA-1:exon:16416;Parent=Msa0739470-mRNA-1
chr5_1 exon 57784395 57784492 57784395 ID=Msa0739470-mRNA-1:exon:16415;Parent=Msa0739470-mRNA-1
chr5_1 exon 57784570 57784679 57784570 ID=Msa0739470-mRNA-1:exon:16414;Parent=Msa0739470-mRNA-1
chr5_1 exon 57784800 57784883 57784800 ID=Msa0739470-mRNA-1:exon:16413;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57784800 57784883 57784800 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57784570 57784679 57784570 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57784395 57784492 57784395 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57784137 57784301 57784137 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57782295 57782875 57782295 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57782096 57782199 57782096 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57781786 57781982 57781786 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57781465 57781517 57781465 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57780736 57780949 57780736 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 CDS 57780015 57780547 57780015 ID=Msa0739470-mRNA-1:cds;Parent=Msa0739470-mRNA-1
chr5_1 three_prime_UTR 57779819 57780014 57779819 ID=Msa0739470-mRNA-1:three_prime_utr;Parent=Msa0739470-mRNA-1
Gene Sequence

>Msa0739470

ATGTCATATCCTATTACCAAACTTTTTCTATCATCATTCATTCTTTGCAGTTTCTTGCTAGAACACACTGATGCCCTTAGAAAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCCTCCCTTGATGATCTTGAGTTAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGCCATGAGAAGGCAAAGGAAACAGTGATGTACTCTTACAATAAGCATATAAATGGATTTGCTGCACTGCTTGAAGATGAAGAGGCATCAAAGATTGCAAATAACTCAAATGTAGTTTCTGTTTTCTTGAGCAAAGAATATAAATTGCACACTACAAGGTCGTGGGACTTTCTTGGACTGGAAAAAGATGGAGGAATTTCTCTTGATTCTGCTTGGTGGAAGGCAAGATTTGGTGAAGATACAATCATGGCTAATTTAGATTCTGTACCTAACACATTCCTATGTTATGTGACAAACTATAGAAAACTAATTGGAGCAAGAATATTCAGCCAAAACTACGAATCACAATATGGAAAACTCAATCCCTCAAACCTCACAGCACGTGACTTTATTGGCCATGGCACACACACATTATCAACAGCAGCAGGTAACTTTTCACCTGATGTAACAATATTCGGCAACGGTAACGGCACAGCGAAAGGTGGTTCTCCTAGAGCACGTGTAGCATCCTACAAAGTATGTTGGTCAAAGACAGATGCAGGTGGATGTCATGAAGCTGATATTCTAGCAGCATTTGATCAAGCTATATATGATGGTGTTGATGTGATTTCAACTTCTTTGGGTGGCTCTAGTCCATATATTGAAGCTTTGTTCACTGATGGAATTTCAATTGGGTCATTTCATGCTTTTGCTAAGAATGTTGTCGTTGTTTGTTCTGCTGGGAATGATGGACCTGCTCATAGGAGTGTTACAAATATTGCACCTTGGTCTTTCACTGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGCCATATTTCTATTGGTAACAAAAATTACATAAAGGGTGCCAGTCTTAGTAAAGGCTTACCATCAGGTCCATCAAAGAAAATATATCAAATGATTCATTCTATCGATGCTAGACTTCTTAATGCTTCAATTCAAGATGCTCGTTTTTGCAAGCCTAGAACACTTGATCCTACCAAAGTAAAGGGAAAGATATTAGTTTGTACTCGACTTGACGAAACTACATCTATTGCTCAAGGCTTTGAAGCTGCTCTTGCAGGAGCAGTAGGAGTTTTCGTGATCAATGATGAGAAAAGTGGAAGTTTACTTCTAGCTGAGCCTCATCCTTTACCTGGTGCGAGATTAAAGCCATCTCCAATTATGGCTGGGTTTTCATCTAGGGGTCCTAGTGCACCTGACATAACTGCTCCTGGAGTGAACATATTGGCTGCTTATTCACTAGCCACCAGTCCATCGAATCTACCATCAGATACACGCCGCATTCCTTACAATCTGCAACAAGGAACTTCAATGTCTTGTCCTCATGTTGCTGGCATTGCTGGTCTTCTCAAGACACTTCATCCTAGTTGGAGCCCAGCTGCTATCAAATCTGCCATCATGACTACCGCTACAACACTAGATAACAACAATCAACCAATCAGAGACGCGTTCGATAAGATAGCGACTCCATTTGAATATGGTTCTGGACATATTCAGCCTAACCTTGCAATGGATCCAGGACTTGTTTATGATCTAAGCACAAATGATTACTTGAACTTCATTTGTGTTTTTGGTCACCGTCACAATTTATTAAAGTTCTTTAATTACAACTCTTACATTTGTCCTGAGTTTTACAACATTGAAAACCTCAATTATCCTTCAATTACTGTGTATAATCGAGGACCGAACCTTATAAACGTTACTCGTACCGTCACAAATGTTGGGTCTCCTAGCACATATGTTGTGGAAATTCAACAACTTGAAGAATTTAAGGTTCATGTTCAACCAAGTTCATTGACATTTAAGGAAATTGGAGAAAAGAAAACCTTTCGGATAATTCTAGAGGCAATAGGTATGCCTCCTCATGGTTTTCCAGTATTTGGGAAATTGACTTGGACAAATGGCAACCACAGAGTAACTAGTCCTATAGTAGTCTTGTAA
Protein sequence

>Msa0739470

MSYPITKLFLSSFILCSFLLEHTDALRKTYIVYLGGHSHGPNPSLDDLELATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEASKIANNSNVVSVFLSKEYKLHTTRSWDFLGLEKDGGISLDSAWWKARFGEDTIMANLDSVPNTFLCYVTNYRKLIGARIFSQNYESQYGKLNPSNLTARDFIGHGTHTLSTAAGNFSPDVTIFGNGNGTAKGGSPRARVASYKVCWSKTDAGGCHEADILAAFDQAIYDGVDVISTSLGGSSPYIEALFTDGISIGSFHAFAKNVVVVCSAGNDGPAHRSVTNIAPWSFTVAASTIDREFVSHISIGNKNYIKGASLSKGLPSGPSKKIYQMIHSIDARLLNASIQDARFCKPRTLDPTKVKGKILVCTRLDETTSIAQGFEAALAGAVGVFVINDEKSGSLLLAEPHPLPGARLKPSPIMAGFSSRGPSAPDITAPGVNILAAYSLATSPSNLPSDTRRIPYNLQQGTSMSCPHVAGIAGLLKTLHPSWSPAAIKSAIMTTATTLDNNNQPIRDAFDKIATPFEYGSGHIQPNLAMDPGLVYDLSTNDYLNFICVFGHRHNLLKFFNYNSYICPEFYNIENLNYPSITVYNRGPNLINVTRTVTNVGSPSTYVVEIQQLEEFKVHVQPSSLTFKEIGEKKTFRIILEAIGMPPHGFPVFGKLTWTNGNHRVTSPIVVL*