AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0855370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0855370 MtrunA17_Chr5g0433051 96.680 723 17 1 1 723 1 716 0.0 1436
Msa0855370 MtrunA17_Chr5g0433071 83.494 727 107 5 1 723 1 718 0.0 1204
Msa0855370 MtrunA17_Chr3g0123411 36.569 443 262 9 284 711 710 1148 3.29e-68 243
Msa0855370 MtrunA17_Chr3g0123411 40.984 305 167 5 414 711 195 493 2.06e-53 199
Msa0855370 MtrunA17_Chr1g0156821 35.862 435 265 8 287 710 803 1234 3.94e-68 243
Msa0855370 MtrunA17_Chr1g0156821 46.091 243 130 1 470 711 370 612 5.17e-53 198
Msa0855370 MtrunA17_Chr7g0264631 38.806 402 220 11 319 704 925 1316 5.85e-68 243
Msa0855370 MtrunA17_Chr7g0264631 41.066 319 175 5 398 709 354 666 1.26e-62 228
Msa0855370 MtrunA17_Chr5g0410921 46.296 270 139 4 446 710 963 1231 6.43e-67 240
Msa0855370 MtrunA17_Chr5g0410921 37.275 389 221 8 320 697 206 582 1.85e-58 215
Msa0855370 MtrunA17_Chr4g0061601 30.129 541 351 10 175 706 101 623 7.37e-67 232
Msa0855370 MtrunA17_Chr3g0128381 42.857 308 153 8 420 709 335 637 1.28e-66 232
Msa0855370 MtrunA17_Chr1g0180601 38.060 402 223 11 319 704 899 1290 8.27e-65 234
Msa0855370 MtrunA17_Chr1g0180601 42.006 319 172 5 398 709 327 639 1.33e-63 230
Msa0855370 MtrunA17_Chr6g0451911 31.712 514 309 12 209 698 748 1243 3.79e-64 232
Msa0855370 MtrunA17_Chr6g0451911 47.162 229 119 1 471 697 359 587 1.74e-57 212
Msa0855370 MtrunA17_Chr4g0041871 35.011 457 263 11 277 711 804 1248 1.55e-63 230
Msa0855370 MtrunA17_Chr4g0041871 35.849 371 207 9 363 711 226 587 2.04e-58 215
Msa0855370 MtrunA17_Chr4g0039821 32.882 517 312 13 199 704 776 1268 1.64e-63 230
Msa0855370 MtrunA17_Chr4g0039821 38.043 368 216 6 345 704 247 610 6.09e-55 204
Msa0855370 MtrunA17_Chr4g0069351 32.271 502 325 10 213 704 774 1270 3.98e-63 229
Msa0855370 MtrunA17_Chr4g0069351 37.931 377 204 11 345 704 249 612 1.36e-56 209
Msa0855370 MtrunA17_Chr6g0481921 32.685 514 310 14 212 704 664 1162 1.02e-62 227
Msa0855370 MtrunA17_Chr6g0481921 41.392 273 154 4 447 714 244 515 8.25e-57 210
Msa0855370 MtrunA17_Chr6g0452061 37.073 410 218 13 318 704 374 766 1.67e-62 223
Msa0855370 MtrunA17_Chr6g0452061 48.696 115 58 1 603 716 14 128 1.76e-23 106
Msa0855370 MtrunA17_Chr6g0453051 36.816 402 226 10 327 712 861 1250 3.58e-62 226
Msa0855370 MtrunA17_Chr6g0453051 44.828 261 141 2 447 704 336 596 3.40e-61 223
Msa0855370 MtrunA17_Chr7g0233901 36.744 430 236 13 289 695 806 1222 4.66e-62 226
Msa0855370 MtrunA17_Chr7g0233901 43.580 257 140 3 453 704 335 591 9.16e-58 213
Msa0855370 MtrunA17_Chr4g0069411 45.802 262 138 3 447 704 1023 1284 7.32e-62 225
Msa0855370 MtrunA17_Chr4g0069411 44.867 263 139 4 447 704 369 630 6.94e-56 207
Msa0855370 MtrunA17_Chr6g0452071 35.104 433 243 12 287 696 23 440 8.53e-62 214
Msa0855370 MtrunA17_Chr4g0069361 32.816 515 315 12 199 704 778 1270 1.20e-61 224
Msa0855370 MtrunA17_Chr4g0069361 45.570 237 126 2 471 704 376 612 5.99e-55 204
Msa0855370 MtrunA17_Chr2g0285301 34.308 513 303 15 212 704 758 1256 1.83e-61 224
Msa0855370 MtrunA17_Chr2g0285301 40.074 272 159 3 447 714 337 608 8.68e-55 204
Msa0855370 MtrunA17_Chr6g0452111 31.215 535 318 14 210 715 753 1266 2.47e-61 223
Msa0855370 MtrunA17_Chr6g0452111 45.113 266 142 3 454 716 350 614 8.01e-59 216
Msa0855370 MtrunA17_Chr6g0451881 30.885 531 325 13 209 712 740 1255 5.32e-61 223
Msa0855370 MtrunA17_Chr6g0451881 48.035 229 117 1 471 697 359 587 6.10e-59 216
Msa0855370 MtrunA17_Chr6g0452171 31.895 533 319 14 210 714 755 1271 5.56e-61 223
Msa0855370 MtrunA17_Chr6g0452171 47.162 229 119 1 471 697 359 587 8.48e-59 216
Msa0855370 MtrunA17_Chr8g0366481 44.610 269 145 3 446 711 360 627 1.22e-60 215
Msa0855370 MtrunA17_Chr2g0285311 45.076 264 140 4 446 704 997 1260 4.00e-60 220
Msa0855370 MtrunA17_Chr2g0285311 43.882 237 130 2 471 704 367 603 5.36e-55 204
Msa0855370 MtrunA17_Chr8g0344651 36.236 356 207 5 364 704 481 831 7.77e-60 219
Msa0855370 MtrunA17_Chr8g0344651 34.772 417 255 8 297 704 1069 1477 9.68e-53 198
Msa0855370 MtrunA17_Chr2g0285191 46.212 264 137 4 446 704 1025 1288 1.35e-59 218
Msa0855370 MtrunA17_Chr2g0285191 42.748 262 146 3 447 704 371 632 8.61e-58 213
Msa0855370 MtrunA17_Chr3g0119381 35.484 403 228 10 330 714 255 643 2.53e-59 218
Msa0855370 MtrunA17_Chr3g0119381 46.414 237 124 2 471 704 1055 1291 1.64e-53 200
Msa0855370 MtrunA17_Chr1g0194001 44.488 254 137 3 446 695 119 372 1.06e-58 203
Msa0855370 MtrunA17_Chr6g0452041 30.912 537 314 14 210 712 754 1267 2.89e-58 214
Msa0855370 MtrunA17_Chr6g0452041 46.725 229 120 1 471 697 359 587 5.63e-57 210
Msa0855370 MtrunA17_Chr6g0452141 31.323 514 305 12 210 696 752 1244 3.92e-58 214
Msa0855370 MtrunA17_Chr6g0452141 48.230 226 115 1 471 694 360 585 1.03e-57 213
Msa0855370 MtrunA17_Chr7g0227391 28.743 501 344 7 212 704 165 660 7.58e-57 205
Msa0855370 MtrunA17_Chr1g0193991 42.748 262 146 3 447 704 362 623 2.07e-56 209
Msa0855370 MtrunA17_Chr1g0193991 44.318 264 142 4 446 704 1016 1279 2.04e-55 206
Msa0855370 MtrunA17_Chr6g0486841 31.078 473 310 8 249 711 776 1242 2.38e-56 208
Msa0855370 MtrunA17_Chr6g0486841 40.684 263 151 3 447 704 331 593 4.51e-53 199
Msa0855370 MtrunA17_Chr4g0069401 45.247 263 140 3 446 704 1006 1268 3.16e-56 208
Msa0855370 MtrunA17_Chr4g0069401 43.511 262 144 3 447 704 346 607 9.18e-56 207
Msa0855370 MtrunA17_Chr5g0412741 28.376 585 384 11 141 713 140 701 7.95e-56 203
Msa0855370 MtrunA17_Chr1g0194031 41.603 262 149 3 447 704 357 618 8.33e-56 205
Msa0855370 MtrunA17_Chr3g0138211 31.286 521 325 10 209 704 760 1272 1.55e-55 206
Msa0855370 MtrunA17_Chr3g0138211 41.603 262 149 3 447 704 369 630 3.74e-54 202
Msa0855370 MtrunA17_Chr1g0178481 32.465 499 308 15 213 695 119 604 4.96e-55 199
Msa0855370 MtrunA17_Chr6g0452081 46.411 209 104 2 471 676 25 228 5.64e-54 185
Msa0855370 MtrunA17_Chr6g0474071 41.250 240 137 2 471 706 211 450 2.10e-52 188
Msa0855370 MtrunA17_Chr1g0212701 39.925 268 157 3 439 704 367 632 9.61e-51 192
Msa0855370 MtrunA17_Chr1g0212701 31.954 435 270 12 287 704 956 1381 8.99e-49 186
Msa0855370 MtrunA17_Chr7g0222781 33.666 401 244 10 317 704 998 1389 3.42e-50 190
Msa0855370 MtrunA17_Chr7g0222781 43.220 236 131 2 471 704 404 638 3.86e-48 184
Msa0855370 MtrunA17_Chr2g0295911 34.717 265 170 3 448 710 1235 1498 9.29e-41 161
Msa0855370 MtrunA17_Chr2g0295911 24.330 448 270 16 304 720 468 877 1.31e-20 97.8
Msa0855370 MtrunA17_Chr2g0295921 36.100 241 152 2 471 710 1271 1510 6.66e-40 158
Msa0855370 MtrunA17_Chr2g0295921 29.876 241 146 4 485 720 667 889 1.54e-19 94.4
Msa0855370 MtrunA17_Chr2g0295901 34.717 265 170 3 448 710 1232 1495 7.37e-40 158
Msa0855370 MtrunA17_Chr2g0295901 28.936 235 152 3 485 718 655 875 1.32e-18 91.3
Msa0855370 MtrunA17_Chr8g0363771 33.585 265 173 3 448 710 1232 1495 3.94e-39 156
Msa0855370 MtrunA17_Chr8g0363771 30.172 232 139 4 494 720 659 872 1.30e-19 94.4
Msa0855370 MtrunA17_Chr8g0376961 35.593 236 149 3 471 704 1196 1430 1.26e-38 154
Msa0855370 MtrunA17_Chr8g0376961 30.244 205 127 4 494 696 610 800 3.40e-16 83.2
Msa0855370 MtrunA17_Chr6g0472531 27.725 422 281 7 288 688 976 1394 7.93e-38 152
Msa0855370 MtrunA17_Chr6g0472531 29.183 257 152 7 459 704 554 791 3.84e-20 96.3
Msa0855370 MtrunA17_Chr6g0463131 29.526 359 230 6 351 688 1088 1444 7.96e-38 152
Msa0855370 MtrunA17_Chr6g0463131 28.235 255 153 7 461 704 606 841 4.00e-17 86.3
Msa0855370 MtrunA17_Chr3g0085281 35.169 236 150 3 471 704 1219 1453 1.41e-37 151
Msa0855370 MtrunA17_Chr3g0085281 30.806 211 129 5 493 700 614 810 5.47e-16 82.8
Msa0855370 MtrunA17_Chr8g0359291 28.065 367 237 9 345 688 263 625 4.99e-37 147
Msa0855370 MtrunA17_Chr6g0463181 28.065 367 237 9 345 688 1065 1427 7.33e-37 149
Msa0855370 MtrunA17_Chr6g0463181 23.383 402 274 9 314 704 449 827 2.38e-17 87.0
Msa0855370 MtrunA17_Chr6g0463141 27.397 365 242 6 345 688 1106 1468 1.74e-36 148
Msa0855370 MtrunA17_Chr6g0463141 24.768 323 191 8 426 714 571 875 3.03e-17 86.7
Msa0855370 MtrunA17_Chr6g0463151 29.255 376 229 9 341 688 895 1261 5.72e-36 146
Msa0855370 MtrunA17_Chr6g0463151 24.816 407 264 12 320 711 286 665 1.85e-20 97.1
Msa0855370 MtrunA17_Chr8g0337121 34.874 238 151 3 461 695 1245 1481 6.06e-36 146
Msa0855370 MtrunA17_Chr8g0337121 30.364 247 153 5 476 718 630 861 3.45e-21 99.4
Msa0855370 MtrunA17_Chr8g0337191 34.874 238 151 3 461 695 1225 1461 6.06e-36 146
Msa0855370 MtrunA17_Chr8g0337191 30.738 244 150 5 476 715 610 838 9.37e-22 101
Msa0855370 MtrunA17_Chr7g0262191 38.725 204 116 2 488 687 1300 1498 2.10e-35 144
Msa0855370 MtrunA17_Chr7g0262191 25.221 452 296 10 279 716 448 871 3.35e-23 105
Msa0855370 MtrunA17_Chr6g0471281 27.830 424 278 10 288 688 1026 1444 3.11e-35 144
Msa0855370 MtrunA17_Chr6g0471281 28.571 252 153 6 471 714 619 851 1.40e-18 90.9
Msa0855370 MtrunA17_Chr1g0183191 38.288 222 127 3 471 687 1282 1498 8.47e-35 142
Msa0855370 MtrunA17_Chr1g0183191 22.595 447 314 8 279 716 452 875 3.43e-20 96.3
Msa0855370 MtrunA17_Chr6g0463121 28.689 366 224 9 351 688 1087 1443 1.10e-34 142
Msa0855370 MtrunA17_Chr6g0463121 30.275 218 135 4 489 704 638 840 7.40e-20 95.1
Msa0855370 MtrunA17_Chr1g0195691 35.156 256 159 5 452 704 1253 1504 1.83e-34 141
Msa0855370 MtrunA17_Chr1g0195691 25.000 408 260 12 331 721 509 887 2.27e-20 97.1
Msa0855370 MtrunA17_Chr6g0463391 27.937 383 237 10 351 704 273 645 3.78e-34 139
Msa0855370 MtrunA17_Chr2g0285731 34.138 290 182 4 418 699 1175 1463 8.47e-34 139
Msa0855370 MtrunA17_Chr2g0285731 29.323 266 159 7 465 716 607 857 8.90e-23 104
Msa0855370 MtrunA17_Chr5g0412941 32.203 236 157 3 471 704 83 317 1.63e-33 131
Msa0855370 MtrunA17_Chr3g0080941 34.375 288 180 4 418 697 1173 1459 2.22e-33 138
Msa0855370 MtrunA17_Chr3g0080941 23.791 517 327 18 212 703 372 846 1.02e-20 98.2
Msa0855370 MtrunA17_Chr8g0341751 31.599 269 180 4 438 704 1009 1275 5.63e-33 137
Msa0855370 MtrunA17_Chr8g0341751 27.132 258 170 5 450 704 402 644 1.28e-20 97.4
Msa0855370 MtrunA17_Chr6g0463211 32.389 247 160 6 462 704 1288 1531 8.86e-33 136
Msa0855370 MtrunA17_Chr6g0463211 24.086 465 302 16 277 719 464 899 1.14e-19 94.7
Msa0855370 MtrunA17_Chr8g0353541 33.191 235 155 2 471 704 826 1059 1.02e-32 135
Msa0855370 MtrunA17_Chr8g0353541 28.413 271 177 4 448 716 185 440 4.79e-24 108
Msa0855370 MtrunA17_Chr1g0202221 31.169 231 155 3 471 699 1133 1361 2.15e-32 135
Msa0855370 MtrunA17_Chr1g0202221 25.941 239 157 5 471 704 616 839 4.89e-16 82.8
Msa0855370 MtrunA17_Chr8g0341851 28.996 269 188 3 438 704 1185 1452 2.19e-32 135
Msa0855370 MtrunA17_Chr8g0341851 31.395 258 148 7 469 717 602 839 4.75e-22 102
Msa0855370 MtrunA17_Chr8g0341761 32.766 235 156 2 471 704 1203 1436 2.28e-32 135
Msa0855370 MtrunA17_Chr8g0341761 27.817 284 182 6 441 716 560 828 2.51e-23 106
Msa0855370 MtrunA17_Chr8g0353781 30.916 262 179 2 444 704 1182 1442 2.67e-32 134
Msa0855370 MtrunA17_Chr8g0353781 27.306 271 180 4 448 716 576 831 3.05e-21 99.8
Msa0855370 MtrunA17_Chr5g0412721 33.051 236 155 3 471 704 1244 1478 3.55e-32 134
Msa0855370 MtrunA17_Chr5g0412721 28.383 303 190 8 423 717 569 852 5.39e-19 92.4
Msa0855370 MtrunA17_Chr5g0445741 32.203 236 157 3 471 704 1249 1483 8.92e-32 133
Msa0855370 MtrunA17_Chr5g0445741 30.603 232 142 5 489 717 648 863 1.76e-18 90.9
Msa0855370 MtrunA17_Chr2g0333911 31.325 249 163 4 456 698 752 998 9.98e-32 132
Msa0855370 MtrunA17_Chr2g0333911 26.768 198 129 4 488 683 177 360 4.95e-13 72.8
Msa0855370 MtrunA17_Chr6g0463201 33.478 230 147 5 462 688 1222 1448 1.05e-31 133
Msa0855370 MtrunA17_Chr6g0463201 28.512 242 153 6 467 704 620 845 9.07e-19 91.7
Msa0855370 MtrunA17_Chr3g0128391 41.401 157 90 1 447 601 230 386 3.91e-31 129
Msa0855370 MtrunA17_Chr3g0128391 52.336 107 51 0 603 709 447 553 7.37e-27 115
Msa0855370 MtrunA17_Chr3g0080981 34.100 261 164 3 438 697 1205 1458 4.16e-31 131
Msa0855370 MtrunA17_Chr3g0080981 27.240 279 181 8 448 717 588 853 4.82e-21 99.0
Msa0855370 MtrunA17_Chr3g0101441 32.203 236 157 3 471 704 1060 1294 8.25e-31 130
Msa0855370 MtrunA17_Chr3g0101441 26.490 302 197 7 423 717 382 665 3.58e-20 96.3
Msa0855370 MtrunA17_Chr5g0445671 31.646 237 159 3 471 705 858 1093 1.07e-30 129
Msa0855370 MtrunA17_Chr5g0445671 30.435 230 145 6 489 717 257 472 1.18e-18 91.3
Msa0855370 MtrunA17_Chr8g0341811 31.064 235 160 2 471 704 1030 1263 1.74e-30 129
Msa0855370 MtrunA17_Chr8g0341811 26.502 283 189 5 426 704 390 657 3.31e-22 102
Msa0855370 MtrunA17_Chr3g0101471 31.780 236 158 3 471 704 1058 1292 2.85e-30 128
Msa0855370 MtrunA17_Chr3g0101471 23.057 386 249 9 346 717 312 663 5.09e-19 92.4
Msa0855370 MtrunA17_Chr5g0445701 35.106 188 121 1 488 675 12 198 3.90e-30 119
Msa0855370 MtrunA17_Chr6g0484351 31.716 268 175 4 438 704 383 643 3.93e-30 126
Msa0855370 MtrunA17_Chr8g0341801 31.489 235 159 2 471 704 185 418 1.11e-29 122
Msa0855370 MtrunA17_Chr3g0101481 32.456 228 152 2 471 697 1253 1479 1.25e-29 126
Msa0855370 MtrunA17_Chr3g0101481 31.064 235 141 5 488 718 641 858 1.30e-20 97.8
Msa0855370 MtrunA17_Chr8g0393151 32.963 270 152 8 447 704 1 253 2.63e-29 117
Msa0855370 MtrunA17_Chr3g0101461 31.780 236 158 3 471 704 1060 1294 4.31e-29 124
Msa0855370 MtrunA17_Chr3g0101461 28.139 231 149 4 489 717 450 665 2.51e-18 90.1
Msa0855370 MtrunA17_Chr8g0366471 50.000 104 52 0 594 697 10 113 1.39e-27 108
Msa0855370 MtrunA17_Chr6g0452051 42.963 135 75 1 471 603 280 414 3.85e-25 108
Msa0855370 MtrunA17_Chr8g0366451 31.068 309 185 9 306 603 156 447 4.71e-25 108
Msa0855370 MtrunA17_Chr5g0412921 31.034 232 141 5 489 717 628 843 2.98e-19 93.2
Msa0855370 MtrunA17_Chr1g0202431 31.538 260 130 9 488 717 50 291 8.19e-19 90.9
Msa0855370 MtrunA17_Chr5g0408061 32.589 224 119 6 485 690 62 271 1.22e-18 90.5
Msa0855370 MtrunA17_Chr1g0198931 32.618 233 132 10 486 706 105 324 5.86e-18 88.6
Msa0855370 MtrunA17_Chr3g0130211 28.261 230 138 6 469 689 32 243 9.40e-18 84.0
Msa0855370 MtrunA17_Chr8g0341791 29.825 171 116 3 548 716 15 183 1.43e-17 85.1
Msa0855370 MtrunA17_Chr1g0176451 32.870 216 129 9 485 689 20 230 2.10e-17 86.3
Msa0855370 MtrunA17_Chr4g0060421 25.424 295 193 10 426 702 76 361 2.56e-17 85.5
Msa0855370 MtrunA17_Chr4g0060401 25.085 295 194 10 426 702 554 839 4.12e-17 85.9
Msa0855370 MtrunA17_Chr3g0093091 26.512 215 145 6 492 702 641 846 5.50e-17 85.5
Msa0855370 MtrunA17_Chr7g0249091 29.200 250 128 10 473 689 86 319 6.75e-17 82.8
Msa0855370 MtrunA17_Chr2g0285231 50.649 77 38 0 619 695 24 100 7.11e-17 76.6
Msa0855370 MtrunA17_Chr4g0060471 26.601 203 136 6 504 702 1 194 7.47e-17 81.6
Msa0855370 MtrunA17_Chr2g0318061 31.019 216 131 8 485 689 28 236 1.34e-16 82.4
Msa0855370 MtrunA17_Chr8g0359931 31.944 216 129 8 485 689 63 271 1.64e-16 83.6
Msa0855370 MtrunA17_Chr4g0060431 25.822 213 145 6 494 702 623 826 1.97e-16 84.0
Msa0855370 MtrunA17_Chr4g0060501 25.822 213 149 5 494 702 638 845 3.73e-16 82.8
Msa0855370 MtrunA17_Chr6g0463401 22.850 407 282 11 277 675 434 816 3.80e-16 82.8
Msa0855370 MtrunA17_Chr1g0176441 33.023 215 129 10 485 689 168 377 4.19e-16 82.4
Msa0855370 MtrunA17_Chr7g0267971 32.093 215 131 10 485 689 157 366 8.71e-16 81.6
Msa0855370 MtrunA17_Chr5g0411621 27.723 303 172 13 444 715 1 287 1.67e-15 80.5
Msa0855370 MtrunA17_Chr1g0199471 30.466 279 144 13 446 689 462 725 1.75e-15 80.9
Msa0855370 MtrunA17_Chr5g0446901 30.660 212 139 6 486 689 107 318 3.57e-15 79.3
Msa0855370 MtrunA17_Chr3g0102731 29.412 221 124 6 487 689 97 303 4.56e-15 79.0
Msa0855370 MtrunA17_Chr1g0200651 28.972 214 139 7 485 689 87 296 6.08e-15 78.6
Msa0855370 MtrunA17_Chr3g0130331 28.148 270 139 9 452 697 35 273 6.91e-15 78.6
Msa0855370 MtrunA17_Chr4g0065231 27.941 272 157 10 475 721 56 313 8.96e-15 78.2
Msa0855370 MtrunA17_Chr8g0349441 27.189 217 138 4 438 653 12 209 4.77e-14 72.0
Msa0855370 MtrunA17_Chr8g0384391 28.378 222 142 8 486 697 54 268 5.50e-14 75.5
Msa0855370 MtrunA17_Chr8g0393191 26.378 254 161 9 470 700 40 290 5.99e-14 75.9
Msa0855370 MtrunA17_Chr6g0484361 27.801 241 142 7 441 668 567 788 1.46e-13 74.3
Msa0855370 MtrunA17_Chr7g0263351 28.571 259 149 10 445 689 98 334 1.08e-12 71.6
Msa0855370 MtrunA17_Chr4g0039261 29.091 220 135 9 486 692 49 260 2.96e-12 70.1
Msa0855370 MtrunA17_Chr7g0257341 26.271 236 155 8 456 685 543 765 3.94e-12 70.1
Msa0855370 MtrunA17_Chr3g0124171 28.631 241 152 6 434 667 409 636 1.05e-11 68.9
Msa0855370 MtrunA17_Chr4g0039251 28.767 219 131 8 486 689 91 299 2.19e-11 67.4
Msa0855370 MtrunA17_Chr2g0316301 26.957 230 131 7 488 696 73 286 2.70e-11 67.0
Msa0855370 MtrunA17_Chr4g0050221 27.149 221 135 7 486 689 29 240 4.51e-11 66.2
Msa0855370 MtrunA17_Chr6g0477811 28.169 213 140 6 486 689 64 272 6.50e-11 65.9
Msa0855370 MtrunA17_Chr8g0371961 34.940 83 54 0 488 570 18 100 6.58e-11 60.5
Msa0855370 MtrunA17_Chr4g0050291 27.313 227 129 8 486 690 48 260 9.13e-11 65.5
Msa0855370 MtrunA17_Chr4g0050261 26.818 220 139 7 486 690 71 283 9.36e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0855370 AT5G58270.1 79.016 610 124 1 116 721 118 727 0.0 1013
Msa0855370 AT4G28630.1 70.579 639 174 3 78 713 50 677 0.0 925
Msa0855370 AT4G28620.1 71.870 615 166 2 102 713 69 679 0.0 904
Msa0855370 AT1G10680.1 37.750 400 221 8 325 709 835 1221 9.19e-68 243
Msa0855370 AT1G10680.1 35.240 437 249 12 287 704 174 595 2.72e-60 221
Msa0855370 AT1G27940.2 31.414 573 356 13 149 704 472 1024 5.03e-65 234
Msa0855370 AT1G27940.2 43.830 235 131 1 471 704 156 390 2.56e-55 205
Msa0855370 AT2G36910.1 37.313 402 226 11 319 704 868 1259 6.36e-65 234
Msa0855370 AT2G36910.1 41.066 319 175 5 398 709 296 608 1.37e-62 228
Msa0855370 AT1G27940.1 31.414 573 356 13 149 704 686 1238 1.86e-64 233
Msa0855370 AT1G27940.1 43.830 235 131 1 471 704 370 604 4.88e-55 205
Msa0855370 AT4G25960.1 45.896 268 141 3 446 710 1004 1270 5.28e-64 232
Msa0855370 AT4G25960.1 43.130 262 145 3 447 704 374 635 2.55e-57 212
Msa0855370 AT3G28380.1 32.234 546 316 14 186 708 722 1236 4.50e-63 229
Msa0855370 AT3G28380.1 44.074 270 147 3 439 704 324 593 3.41e-62 226
Msa0855370 AT3G28415.1 44.074 270 147 3 439 704 303 572 5.92e-62 226
Msa0855370 AT3G28415.1 36.500 400 212 11 322 698 825 1205 2.80e-60 221
Msa0855370 AT5G46540.1 36.951 387 225 7 330 704 861 1240 6.58e-62 226
Msa0855370 AT5G46540.1 41.221 262 150 3 447 704 330 591 4.11e-55 205
Msa0855370 AT3G28415.2 44.074 270 147 3 439 704 311 580 6.85e-62 225
Msa0855370 AT3G28415.2 36.500 400 212 11 322 698 833 1213 3.35e-60 220
Msa0855370 AT4G18050.1 36.429 420 250 8 298 704 813 1228 9.61e-62 225
Msa0855370 AT4G18050.1 45.570 237 126 2 471 704 353 589 1.45e-56 209
Msa0855370 AT4G18050.2 36.429 420 250 8 298 704 823 1238 9.78e-62 225
Msa0855370 AT4G18050.2 45.570 237 126 2 471 704 363 599 1.51e-56 209
Msa0855370 AT1G28010.1 30.743 579 352 13 149 704 688 1240 1.71e-61 224
Msa0855370 AT1G28010.1 44.000 250 139 1 461 709 361 610 3.15e-56 209
Msa0855370 AT3G28345.1 44.569 267 145 2 459 722 345 611 1.72e-61 224
Msa0855370 AT3G28345.1 32.909 471 278 10 249 698 771 1224 2.55e-58 215
Msa0855370 AT3G28390.1 50.424 236 113 2 471 702 978 1213 2.04e-61 224
Msa0855370 AT3G28390.1 46.988 249 129 2 459 704 333 581 4.90e-61 223
Msa0855370 AT1G02520.1 45.038 262 140 3 447 704 354 615 3.47e-61 223
Msa0855370 AT1G02520.1 45.324 278 138 5 433 704 1000 1269 1.36e-59 219
Msa0855370 AT1G02520.2 45.038 262 140 3 447 704 354 615 3.47e-61 223
Msa0855370 AT1G02520.2 45.324 278 138 5 433 704 1000 1269 1.36e-59 219
Msa0855370 AT1G02520.3 45.038 262 140 3 447 704 354 615 3.47e-61 223
Msa0855370 AT1G02520.3 45.324 278 138 5 433 704 1000 1269 1.36e-59 219
Msa0855370 AT1G10680.2 35.240 437 249 12 287 704 174 595 2.18e-60 221
Msa0855370 AT1G10680.2 38.209 335 180 7 325 645 835 1156 1.34e-53 201
Msa0855370 AT3G28860.1 47.200 250 130 1 457 704 349 598 2.44e-60 221
Msa0855370 AT3G28860.1 46.531 245 128 2 471 712 1008 1252 5.31e-60 220
Msa0855370 AT1G70610.2 28.876 516 341 9 212 712 14 518 2.57e-60 212
Msa0855370 AT1G02530.2 43.893 262 143 3 447 704 341 602 1.13e-59 218
Msa0855370 AT1G70610.1 28.080 552 368 10 176 712 162 699 1.57e-59 214
Msa0855370 AT3G28360.1 44.788 259 140 2 449 704 321 579 3.70e-59 217
Msa0855370 AT3G28360.1 35.980 403 213 11 328 704 835 1218 2.49e-58 215
Msa0855370 AT1G02530.1 43.893 262 143 3 447 704 341 602 3.85e-59 217
Msa0855370 AT1G02530.1 44.245 278 141 5 433 704 995 1264 5.47e-59 217
Msa0855370 AT3G62150.3 43.494 269 148 3 447 711 376 644 7.81e-59 216
Msa0855370 AT3G62150.3 45.136 257 136 4 452 704 1032 1287 2.44e-57 212
Msa0855370 AT3G62150.2 43.494 269 148 3 447 711 376 644 7.81e-59 216
Msa0855370 AT3G62150.2 45.136 257 136 4 452 704 1032 1287 2.44e-57 212
Msa0855370 AT3G62150.1 43.494 269 148 3 447 711 376 644 7.81e-59 216
Msa0855370 AT3G62150.1 45.136 257 136 4 452 704 1032 1287 2.44e-57 212
Msa0855370 AT4G01830.2 43.893 262 143 3 447 704 92 353 1.90e-58 214
Msa0855370 AT4G01830.2 44.737 266 139 5 446 704 723 987 7.02e-58 213
Msa0855370 AT4G01830.1 43.893 262 143 3 447 704 326 587 2.17e-58 215
Msa0855370 AT4G01830.1 44.737 266 139 5 446 704 957 1221 8.46e-58 213
Msa0855370 AT5G39040.1 29.320 515 348 8 212 717 136 643 2.38e-58 209
Msa0855370 AT4G01820.2 44.656 262 141 3 447 704 321 582 3.84e-58 213
Msa0855370 AT4G01820.1 44.656 262 141 3 447 704 321 582 9.02e-58 213
Msa0855370 AT4G01820.1 43.066 274 143 5 436 704 955 1220 5.42e-54 202
Msa0855370 AT2G47000.3 42.748 262 146 3 447 704 357 618 1.39e-57 212
Msa0855370 AT2G47000.7 42.748 262 146 3 447 704 357 618 1.39e-57 212
Msa0855370 AT2G47000.2 42.748 262 146 3 447 704 357 618 2.49e-57 212
Msa0855370 AT2G47000.2 34.969 163 102 3 446 604 1014 1176 8.35e-21 98.6
Msa0855370 AT2G47000.4 42.748 262 146 3 447 704 357 618 2.72e-57 211
Msa0855370 AT2G47000.6 42.748 262 146 3 447 704 357 618 2.75e-57 212
Msa0855370 AT2G47000.6 42.803 264 146 4 446 704 1014 1277 4.99e-56 208
Msa0855370 AT2G47000.5 42.748 262 146 3 447 704 357 618 2.75e-57 212
Msa0855370 AT2G47000.5 42.803 264 146 4 446 704 1014 1277 4.99e-56 208
Msa0855370 AT2G47000.1 42.748 262 146 3 447 704 357 618 2.75e-57 212
Msa0855370 AT2G47000.1 42.803 264 146 4 446 704 1014 1277 4.99e-56 208
Msa0855370 AT4G25450.3 40.698 258 148 3 455 708 284 540 8.42e-54 194
Msa0855370 AT4G25450.1 40.698 258 148 3 455 708 453 709 1.83e-52 194
Msa0855370 AT3G55320.1 33.103 435 265 13 287 704 968 1393 2.98e-50 191
Msa0855370 AT3G55320.1 40.299 268 156 3 439 704 381 646 4.82e-50 190
Msa0855370 AT5G03910.1 32.321 461 276 10 240 687 176 613 2.63e-49 184
Msa0855370 AT2G39480.2 43.220 236 131 2 471 704 230 464 4.48e-49 187
Msa0855370 AT2G39480.2 41.772 237 135 2 471 704 976 1212 9.57e-48 183
Msa0855370 AT2G39480.1 43.220 236 131 2 471 704 410 644 5.03e-49 187
Msa0855370 AT2G39480.1 41.772 237 135 2 471 704 1156 1392 1.17e-47 182
Msa0855370 AT3G60970.1 37.727 220 135 2 469 687 798 1016 5.19e-38 152
Msa0855370 AT3G60970.1 26.225 408 275 8 293 695 39 425 2.92e-25 112
Msa0855370 AT3G60160.1 37.273 220 136 2 469 687 1251 1469 2.41e-37 151
Msa0855370 AT3G60160.1 24.960 625 413 14 99 715 285 861 1.86e-23 107
Msa0855370 AT3G60160.3 37.273 220 136 2 469 687 1215 1433 2.46e-37 151
Msa0855370 AT3G60160.3 24.960 625 413 14 99 715 249 825 2.38e-23 107
Msa0855370 AT1G04120.3 36.404 228 143 2 471 697 1231 1457 1.02e-35 146
Msa0855370 AT1G04120.3 29.021 286 176 6 439 716 553 819 2.56e-23 106
Msa0855370 AT1G04120.1 36.404 228 143 2 471 697 1266 1492 1.18e-35 145
Msa0855370 AT1G04120.1 25.537 419 273 10 311 716 462 854 2.72e-24 109
Msa0855370 AT3G62700.1 34.646 254 163 3 452 704 1277 1528 2.76e-35 144
Msa0855370 AT3G62700.1 23.133 415 272 12 318 716 488 871 3.97e-20 96.7
Msa0855370 AT3G21250.1 32.593 270 178 3 437 704 1168 1435 1.20e-34 142
Msa0855370 AT3G21250.1 27.667 300 187 6 423 718 548 821 7.92e-20 95.5
Msa0855370 AT3G21250.5 32.593 270 178 3 437 704 1174 1441 1.27e-34 142
Msa0855370 AT3G21250.5 27.667 300 187 6 423 718 554 827 7.67e-20 95.5
Msa0855370 AT3G21250.4 32.593 270 178 3 437 704 1185 1452 1.29e-34 142
Msa0855370 AT3G21250.4 28.333 300 196 5 423 718 554 838 1.28e-23 107
Msa0855370 AT3G21250.2 32.593 270 178 3 437 704 1179 1446 1.54e-34 142
Msa0855370 AT3G21250.2 28.333 300 196 5 423 718 548 832 1.40e-23 107
Msa0855370 AT3G21250.6 32.593 270 178 3 437 704 763 1030 1.94e-34 141
Msa0855370 AT3G21250.6 28.333 300 196 5 423 718 132 416 1.26e-23 107
Msa0855370 AT3G21250.3 32.593 270 178 3 437 704 763 1030 1.94e-34 141
Msa0855370 AT3G21250.3 28.333 300 196 5 423 718 132 416 1.26e-23 107
Msa0855370 AT2G34660.1 36.145 249 155 3 453 699 1222 1468 3.53e-34 141
Msa0855370 AT2G34660.1 28.472 288 182 7 423 704 566 835 3.86e-25 112
Msa0855370 AT2G34660.2 36.145 249 155 3 453 699 1222 1468 3.53e-34 141
Msa0855370 AT2G34660.2 28.472 288 182 7 423 704 566 835 3.86e-25 112
Msa0855370 AT2G34660.3 36.145 249 155 3 453 699 935 1181 4.12e-34 140
Msa0855370 AT2G34660.3 28.472 288 182 7 423 704 279 548 3.05e-25 112
Msa0855370 AT1G04120.2 35.897 234 131 4 471 697 1266 1487 6.43e-33 137
Msa0855370 AT1G04120.2 25.537 419 273 10 311 716 462 854 2.88e-24 109
Msa0855370 AT1G30410.5 34.375 288 175 7 418 694 1058 1342 2.28e-32 135
Msa0855370 AT1G30410.5 30.147 272 168 7 423 689 452 706 5.39e-23 105
Msa0855370 AT1G30400.2 37.991 229 140 2 471 698 1235 1462 2.44e-32 135
Msa0855370 AT1G30400.2 26.115 314 197 9 423 720 566 860 4.08e-24 109
Msa0855370 AT1G30400.1 37.991 229 140 2 471 698 1235 1462 2.44e-32 135
Msa0855370 AT1G30400.1 26.115 314 197 9 423 720 566 860 4.08e-24 109
Msa0855370 AT2G47800.1 33.205 259 170 3 448 704 1248 1505 2.74e-32 135
Msa0855370 AT2G47800.1 23.704 405 265 11 328 716 497 873 1.81e-20 97.8
Msa0855370 AT1G30410.2 34.375 288 175 7 418 694 1173 1457 2.90e-32 135
Msa0855370 AT1G30410.2 29.206 315 187 10 423 722 567 860 7.23e-23 105
Msa0855370 AT1G30410.6 34.375 288 175 7 418 694 1173 1457 2.90e-32 135
Msa0855370 AT1G30410.6 29.206 315 187 10 423 722 567 860 7.23e-23 105
Msa0855370 AT1G30410.4 34.375 288 175 7 418 694 1173 1457 2.90e-32 135
Msa0855370 AT1G30410.4 29.206 315 187 10 423 722 567 860 7.23e-23 105
Msa0855370 AT1G30410.1 34.375 288 175 7 418 694 1176 1460 2.98e-32 135
Msa0855370 AT1G30410.1 29.206 315 187 10 423 722 570 863 7.24e-23 105
Msa0855370 AT1G30420.1 36.555 238 146 4 461 694 1221 1457 3.27e-32 135
Msa0855370 AT1G30420.1 31.140 228 141 5 465 689 607 821 5.12e-23 105
Msa0855370 AT3G59140.1 31.050 219 149 2 471 688 1205 1422 2.18e-31 132
Msa0855370 AT3G59140.1 22.500 440 305 10 277 704 407 822 9.74e-20 95.1
Msa0855370 AT3G13080.1 31.707 246 162 4 461 704 1260 1501 3.45e-31 132
Msa0855370 AT3G13080.1 28.070 171 115 4 552 718 708 874 3.37e-13 73.9
Msa0855370 AT3G13090.1 31.707 246 162 4 461 704 1210 1451 5.16e-31 131
Msa0855370 AT3G13090.1 29.487 156 106 3 565 718 682 835 1.76e-15 81.6
Msa0855370 AT3G13080.5 33.036 224 145 3 461 683 1260 1479 1.17e-30 130
Msa0855370 AT3G13080.5 28.070 171 115 4 552 718 708 874 3.60e-13 73.9
Msa0855370 AT3G13100.2 31.301 246 163 4 461 704 987 1228 9.01e-30 127
Msa0855370 AT3G13100.2 27.575 301 195 8 423 717 329 612 8.92e-19 92.0
Msa0855370 AT3G13100.1 31.301 246 163 4 461 704 1232 1473 9.74e-30 127
Msa0855370 AT3G13100.1 27.575 301 195 8 423 717 574 857 9.63e-19 92.0
Msa0855370 AT1G67940.1 33.617 235 123 8 487 704 43 261 9.52e-29 116
Msa0855370 AT2G07680.1 30.314 287 190 6 418 697 1108 1391 2.23e-28 122
Msa0855370 AT2G07680.1 31.000 200 122 4 492 689 582 767 2.67e-15 80.9
Msa0855370 AT2G07680.6 30.314 287 190 6 418 697 1031 1314 2.26e-28 122
Msa0855370 AT2G07680.6 31.122 196 119 4 492 685 505 686 2.57e-15 80.9
Msa0855370 AT2G07680.4 30.314 287 190 6 418 697 1105 1388 2.29e-28 122
Msa0855370 AT2G07680.4 31.000 200 122 4 492 689 579 764 2.71e-15 80.9
Msa0855370 AT2G07680.3 30.314 287 190 6 418 697 1130 1413 2.50e-28 122
Msa0855370 AT2G07680.3 31.000 200 122 4 492 689 604 789 2.77e-15 80.9
Msa0855370 AT2G07680.5 30.314 287 190 6 418 697 1114 1397 2.55e-28 122
Msa0855370 AT2G07680.5 31.000 200 122 4 492 689 588 773 2.65e-15 80.9
Msa0855370 AT4G25450.2 37.349 166 99 3 455 616 453 617 1.64e-25 112
Msa0855370 AT3G13080.2 29.675 246 142 5 461 704 1260 1476 1.58e-23 107
Msa0855370 AT3G13080.2 28.070 171 115 4 552 718 708 874 3.24e-13 74.3
Msa0855370 AT3G60160.2 24.960 625 413 14 99 715 285 861 2.68e-23 106
Msa0855370 AT3G60160.2 38.596 114 68 2 469 581 1251 1363 8.72e-17 85.9
Msa0855370 AT1G30420.2 31.140 228 141 5 465 689 607 821 5.53e-23 105
Msa0855370 AT1G30410.3 30.147 272 168 7 423 689 567 821 7.39e-23 105
Msa0855370 AT1G30410.3 32.275 189 115 6 418 596 1173 1358 1.09e-16 85.5
Msa0855370 AT5G39040.2 23.706 367 265 7 212 570 136 495 3.47e-19 92.0
Msa0855370 AT3G47780.1 27.189 217 143 7 491 702 636 842 4.63e-17 86.3
Msa0855370 AT1G31770.1 30.942 223 122 6 485 689 78 286 5.42e-17 85.5
Msa0855370 AT3G25620.2 28.821 229 144 8 486 706 97 314 1.25e-16 84.7
Msa0855370 AT3G47750.1 26.512 215 149 5 491 701 638 847 1.29e-16 84.7
Msa0855370 AT5G19410.2 27.823 248 159 7 488 721 75 316 1.30e-16 84.3
Msa0855370 AT3G25620.1 29.437 231 140 9 486 706 97 314 1.77e-16 83.2
Msa0855370 AT5G19410.1 27.823 248 159 7 488 721 66 307 1.80e-16 84.0
Msa0855370 AT5G52860.1 33.333 213 118 7 488 689 44 243 2.16e-16 83.6
Msa0855370 AT3G47770.2 26.996 263 170 9 453 702 586 839 3.27e-16 83.6
Msa0855370 AT3G47760.3 26.457 223 153 6 485 702 631 847 3.53e-16 83.6
Msa0855370 AT3G47760.1 26.457 223 153 6 485 702 591 807 3.85e-16 83.2
Msa0855370 AT3G47760.2 26.577 222 152 6 485 701 601 816 4.01e-16 83.2
Msa0855370 AT3G47770.1 26.996 263 170 9 453 702 560 813 4.50e-16 83.2
Msa0855370 AT5G61740.2 25.455 275 175 10 441 702 525 782 4.70e-16 83.2
Msa0855370 AT4G25750.1 30.317 221 125 6 488 694 30 235 4.95e-16 82.4
Msa0855370 AT5G61740.1 25.455 275 175 10 441 702 559 816 5.57e-16 82.8
Msa0855370 AT5G61740.3 25.714 280 168 11 441 702 420 677 5.96e-16 82.4
Msa0855370 AT5G06530.2 32.558 215 130 9 485 689 176 385 1.70e-15 81.3
Msa0855370 AT5G06530.1 32.558 215 130 9 485 689 176 385 1.70e-15 81.3
Msa0855370 AT5G06530.3 32.558 215 130 9 485 689 176 385 1.92e-15 80.9
Msa0855370 AT2G07680.2 31.000 200 122 4 492 689 604 789 2.10e-15 81.3
Msa0855370 AT3G47740.1 25.676 222 150 7 486 702 628 839 2.16e-15 80.9
Msa0855370 AT3G47790.1 25.806 217 150 6 491 702 609 819 4.91e-15 79.7
Msa0855370 AT1G65410.1 27.490 251 138 11 473 692 85 322 1.49e-14 76.3
Msa0855370 AT2G13610.1 28.972 214 135 8 486 689 60 266 3.29e-14 76.6
Msa0855370 AT4G27420.1 29.204 226 125 8 485 689 63 274 6.52e-14 75.9
Msa0855370 AT2G37360.1 29.864 221 137 9 481 689 126 340 8.13e-14 75.9
Msa0855370 AT3G13220.1 30.660 212 135 7 486 689 104 311 1.28e-13 75.1
Msa0855370 AT3G13080.3 28.070 171 115 4 552 718 708 874 2.11e-13 74.7
Msa0855370 AT3G13080.4 28.070 171 115 4 552 718 708 874 2.11e-13 74.7
Msa0855370 AT1G53270.1 27.848 237 150 8 467 689 27 256 2.42e-13 73.9
Msa0855370 AT1G71960.1 29.717 212 135 8 485 686 80 287 3.76e-13 73.6
Msa0855370 AT1G71330.1 29.688 128 87 2 592 718 21 146 3.78e-13 71.6
Msa0855370 AT3G53510.1 29.412 221 134 9 483 689 121 333 7.14e-13 72.8
Msa0855370 AT1G51500.1 30.531 226 133 9 479 689 35 251 9.66e-13 72.0
Msa0855370 AT2G37010.2 28.322 286 155 13 439 689 438 708 5.91e-12 70.1
Msa0855370 AT2G37010.1 28.322 286 155 13 439 689 438 708 5.91e-12 70.1
Msa0855370 AT1G17840.1 28.169 213 140 6 486 689 67 275 8.60e-12 68.9
Msa0855370 AT3G55090.1 27.928 222 140 8 481 689 100 314 1.45e-11 68.6
Msa0855370 AT2G39350.1 27.650 217 137 8 486 689 107 316 2.60e-11 67.8
Msa0855370 AT5G06530.4 31.282 195 119 9 505 689 1 190 2.81e-11 67.0
Msa0855370 AT3G55130.1 28.372 215 139 7 486 689 97 307 3.27e-11 67.4
Msa0855370 AT1G53390.1 27.778 216 139 9 486 689 521 731 4.63e-11 67.0
Msa0855370 AT2G41700.2 25.778 225 154 6 467 685 473 690 7.46e-11 66.6
Msa0855370 AT2G41700.1 25.778 225 154 6 467 685 543 760 7.88e-11 66.6

Find 178 sgRNAs with CRISPR-Local

Find 717 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCATGGATTGCTGCTTTC+CGG 0.169477 5_4:+48650959 None:intergenic
TAAATTCATACATAATTTAT+TGG 0.185031 5_4:-48649482 Msa0855370:three_prime_UTR
GGTAACTAATAAGGGATTTA+AGG 0.199103 5_4:+48659805 None:intergenic
AATATGCAGGTGATGGTAAA+TGG 0.199922 5_4:-48655010 Msa0855370:intron
TCATCCAAAGGTAACTAATA+AGG 0.229718 5_4:+48659796 None:intergenic
GAACCAATTACTTACTCTTT+AGG 0.235839 5_4:+48655585 None:intergenic
CAATATTCAGATCATTGTTT+TGG 0.251745 5_4:-48649819 Msa0855370:intron
TAAAATGTACATTCTCAAAT+TGG 0.252189 5_4:+48653078 None:intergenic
GCAAAGCCTCTAAGGTTTAA+TGG 0.262886 5_4:-48653110 Msa0855370:CDS
ACTGTAACGGTAACCGATTC+TGG 0.267499 5_4:+48660058 None:intergenic
TCTTTATGCTCCCACTTTGA+TGG 0.274213 5_4:+48649685 None:intergenic
CTGTCAGTTGCTGCATATAT+TGG 0.275745 5_4:-48656098 Msa0855370:CDS
GGTATACTGGCCTACAAATA+TGG 0.304468 5_4:-48656146 Msa0855370:CDS
ATGGCAGTGTTGATTGGATA+TGG 0.306041 5_4:-48657364 Msa0855370:CDS
GTCATGGATTGCTGCTTTCC+GGG 0.308116 5_4:+48650960 None:intergenic
AAGAAAATGCAAAGCCTCTA+AGG 0.319198 5_4:-48653118 Msa0855370:CDS
GTCATTATCAGCCTTATTCA+TGG 0.325503 5_4:+48655811 None:intergenic
CAAAGCCTCTAAGGTTTAAT+GGG 0.325662 5_4:-48653109 Msa0855370:CDS
TTCAGTGGAGGACTAAATTC+AGG 0.326820 5_4:-48655838 Msa0855370:intron
CACAATGACTGTTGGTGATT+TGG 0.329778 5_4:-48655278 Msa0855370:intron
CATCCAAAGGTAACTAATAA+GGG 0.332237 5_4:+48659797 None:intergenic
AGGAAGATATGCACAGCTTT+GGG 0.333688 5_4:-48649744 Msa0855370:CDS
AATCCCTTATTAGTTACCTT+TGG 0.335581 5_4:-48659800 Msa0855370:CDS
GGATATGGGATTGCACGTTC+TGG 0.341254 5_4:-48657349 Msa0855370:CDS
CTGATAATGACGCTAGTACT+AGG 0.342140 5_4:-48655799 Msa0855370:CDS
ACTGAGGCATACCTCTAATA+TGG 0.351079 5_4:+48656362 None:intergenic
ATGTATCCCTTGAGAGTTTA+CGG 0.355828 5_4:-48651284 Msa0855370:CDS
TAATCTTGAATTTCAGCTTC+GGG 0.356883 5_4:-48659769 Msa0855370:CDS
AGATAGATGATCAAGATATT+CGG 0.357328 5_4:-48651308 Msa0855370:CDS
TATTCAAGCTTGGAGTTGAT+TGG 0.357739 5_4:-48657459 Msa0855370:CDS
ATTCAGGAAAGCCATGAATA+AGG 0.357979 5_4:-48655822 Msa0855370:CDS
AGTATCACATTCTTTATCCT+TGG 0.359413 5_4:-48649540 Msa0855370:three_prime_UTR
TTAACGTTGAATGAAGTTAG+AGG 0.373504 5_4:-48660392 None:intergenic
ACATGGCTTTCATGTCGATT+AGG 0.378610 5_4:+48654921 None:intergenic
ATCCAGATATCTATGGTATC+AGG 0.379838 5_4:-48656167 Msa0855370:intron
CTTGTTATTTAGAAGTGCTT+TGG 0.385533 5_4:+48649349 None:intergenic
GATAGATGATCAAGATATTC+GGG 0.387294 5_4:-48651307 Msa0855370:CDS
GTCCCTTTCTTATTCAAGCT+TGG 0.390085 5_4:-48657469 Msa0855370:CDS
CAGAATACTTACAGTATTGC+AGG 0.395874 5_4:+48650462 None:intergenic
TCTCTTCCACTCTATTTCCT+TGG 0.399272 5_4:-48654971 Msa0855370:CDS
ATCTATGGTATCAGGTATAC+TGG 0.401321 5_4:-48656159 Msa0855370:CDS
ATAATCTTGAATTTCAGCTT+CGG 0.401531 5_4:-48659770 Msa0855370:CDS
CTTCCACTCTATTTCCTTGG+TGG 0.407177 5_4:-48654968 Msa0855370:CDS
ACAGAAAGAAAGATACTAGA+TGG 0.408317 5_4:-48652284 Msa0855370:CDS
CATATCGATCCAGATATCTA+TGG 0.408701 5_4:-48656174 Msa0855370:intron
CAGGAAGATATGCACAGCTT+TGG 0.409037 5_4:-48649745 Msa0855370:CDS
TTGACCTTCGATATCATCTA+AGG 0.409081 5_4:-48656743 Msa0855370:intron
CATAGTACCTACCATATTAG+AGG 0.409705 5_4:-48656373 Msa0855370:intron
GTATCACATTCTTTATCCTT+GGG 0.413468 5_4:-48649539 Msa0855370:three_prime_UTR
CATTTCTTACACTTCCAGAA+TGG 0.414448 5_4:+48651645 None:intergenic
TGATTCACTTATTAATTATG+AGG 0.415165 5_4:-48655771 Msa0855370:intron
GAGAGTTTACGGAAGTCTAT+TGG 0.418543 5_4:-48651273 Msa0855370:CDS
ATTTCTTACACTTCCAGAAT+GGG 0.419330 5_4:+48651646 None:intergenic
TTCCTTGCTCTTCAAGAAAG+AGG 0.421754 5_4:-48649648 Msa0855370:three_prime_UTR
TACGCCGTTCCCACCACTTC+CGG 0.426178 5_4:-48660146 Msa0855370:CDS
AAATGATTGCCGCTGCTTCA+AGG 0.426756 5_4:-48660169 Msa0855370:CDS
ACGATTCCCGCTGCCGGAAG+TGG 0.428023 5_4:+48660133 None:intergenic
ATATTTCATAACATTCACTA+TGG 0.428886 5_4:-48651124 Msa0855370:CDS
GAGCCTGTGAGCAATGAAAA+TGG 0.429900 5_4:+48650188 None:intergenic
GGTAAAAGTGTTGCAATTGT+TGG 0.434197 5_4:-48652239 Msa0855370:CDS
AGTTTGTGTGGTGTTTGAAA+TGG 0.435145 5_4:-48660336 Msa0855370:five_prime_UTR
AATAGAGTGGAAGAGATAGT+TGG 0.442703 5_4:+48654978 None:intergenic
GGACAATTCGTTTAGTTTCA+AGG 0.447929 5_4:-48656992 Msa0855370:CDS
AGTCTTGCTTTGTTGAACTT+TGG 0.448486 5_4:-48655370 Msa0855370:CDS
ACTCCAAGCTTGAATAAGAA+AGG 0.455100 5_4:+48657466 None:intergenic
CACTCAATTCCCACCAGAAT+CGG 0.459031 5_4:-48660071 Msa0855370:CDS
TCTGGAGCTTCTGCTTTCAA+TGG 0.464823 5_4:-48657331 Msa0855370:intron
CAATATATGCAGCAACTGAC+AGG 0.468437 5_4:+48656099 None:intergenic
ATATGCAGGTGATGGTAAAT+GGG 0.470801 5_4:-48655009 Msa0855370:intron
CATAATTTATTGGTGTTCAA+AGG 0.474740 5_4:-48649472 Msa0855370:three_prime_UTR
TTCATAACATTCACTATGGC+CGG 0.475062 5_4:-48651120 Msa0855370:CDS
CCGGCAGCGGGAATCGTGTC+CGG 0.487387 5_4:-48660127 Msa0855370:CDS
TTCCCACCACTTCCGGCAGC+GGG 0.489465 5_4:-48660139 Msa0855370:CDS
ATACATGTGTGTCATGTTGT+GGG 0.493395 5_4:-48660313 Msa0855370:five_prime_UTR
TATCCAATCAACACTGCCAT+GGG 0.493620 5_4:+48657367 None:intergenic
ATTCCCGCTGCCGGAAGTGG+TGG 0.493647 5_4:+48660136 None:intergenic
CAAGATTATCTTTCATCCAA+AGG 0.496040 5_4:+48659784 None:intergenic
TTTATAGAGAAAATTGAACT+TGG 0.498059 5_4:+48659990 None:intergenic
GTTCCCACCACTTCCGGCAG+CGG 0.500303 5_4:-48660140 Msa0855370:CDS
GTAAAAGTGTTGCAATTGTT+GGG 0.502684 5_4:-48652238 Msa0855370:CDS
TGTTCTCATGGGATCATGAA+TGG 0.503318 5_4:-48655301 Msa0855370:CDS
CACAAACTTCTCTCTTTCAA+AGG 0.504449 5_4:+48660351 None:intergenic
CGAACAATTGATCGTGGTAG+CGG 0.506493 5_4:-48656432 Msa0855370:CDS
TACTGCTCTTTCAACAGCAA+TGG 0.507400 5_4:-48655329 Msa0855370:CDS
AGAGATCTTGCAACCAACAC+TGG 0.508318 5_4:+48649571 None:intergenic
TGGCAGTGTTGATTGGATAT+GGG 0.515347 5_4:-48657363 Msa0855370:CDS
TTGGACATGGTTTGAGCTGA+CGG 0.516587 5_4:+48660009 None:intergenic
AAAAGGTGCTCCATATTTGT+AGG 0.520423 5_4:+48656136 None:intergenic
TGCTTCGAATCCTACTATGA+TGG 0.521863 5_4:-48657404 Msa0855370:CDS
TTCCTCTTTCTTGAAGAGCA+AGG 0.523375 5_4:+48649646 None:intergenic
TGAGTGGCCTGTGGTGATGC+AGG 0.525488 5_4:+48660088 None:intergenic
GTTGCAATTGTTGGGACTAG+TGG 0.533303 5_4:-48652230 Msa0855370:CDS
TGATAATGACGCTAGTACTA+GGG 0.535198 5_4:-48655798 Msa0855370:CDS
TGTTTACTTACAGTATCTTG+TGG 0.535732 5_4:+48651243 None:intergenic
ATCTGAATAGCATTCTGAGA+AGG 0.535884 5_4:+48651678 None:intergenic
AGGGAAGTAATCCATGCAAA+AGG 0.535939 5_4:+48656119 None:intergenic
CCGGACACGATTCCCGCTGC+CGG 0.541849 5_4:+48660127 None:intergenic
TGTGGGAGAACGAGGGCTAA+AGG 0.544014 5_4:-48650902 Msa0855370:intron
TCTGAATAGCATTCTGAGAA+GGG 0.544820 5_4:+48651679 None:intergenic
TAGACTTCCGTAAACTCTCA+AGG 0.546719 5_4:+48651277 None:intergenic
TCCACTGTTGTGGGAGAACG+AGG 0.546737 5_4:-48650910 Msa0855370:CDS
GAAGTTGAGTCGTCTTTCCG+TGG 0.546866 5_4:-48649427 Msa0855370:three_prime_UTR
ATTGTTTAGTGATCCAGTGT+TGG 0.546873 5_4:-48649584 Msa0855370:three_prime_UTR
CTCCAAGCTTGAATAAGAAA+GGG 0.548586 5_4:+48657467 None:intergenic
TACAGGTTTATGAAGCCGCC+CGG 0.553200 5_4:-48650978 Msa0855370:intron
CCTCTTCTGTTGCTGAAAGC+CGG 0.558551 5_4:+48651101 None:intergenic
ATGTGTGTCATGTTGTGGGG+TGG 0.559930 5_4:-48660309 Msa0855370:five_prime_UTR
ACAGCTTCCTGCATCACCAC+AGG 0.560241 5_4:-48660095 Msa0855370:CDS
TGTGTGTCATGTTGTGGGGT+GGG 0.560695 5_4:-48660308 Msa0855370:five_prime_UTR
GATACATGTGTGTCATGTTG+TGG 0.562895 5_4:-48660314 Msa0855370:five_prime_UTR
ATATCACTAGTTGTGCCAGC+TGG 0.564123 5_4:-48652260 Msa0855370:CDS
AGCCATGTTTCAGTTACTTG+AGG 0.564217 5_4:-48654906 Msa0855370:intron
GCTGCCGGAAGTGGTGGGAA+CGG 0.565585 5_4:+48660142 None:intergenic
GATTGGTTGAATACTGCCAC+GGG 0.569944 5_4:-48657442 Msa0855370:CDS
AAAATTGATGTGATAACCCA+AGG 0.572133 5_4:+48649523 None:intergenic
AATTCGTTTAGTTTCAAGGA+AGG 0.573258 5_4:-48656988 Msa0855370:intron
GAAGTGCTCTTAGCAAATGC+AGG 0.576844 5_4:-48649764 Msa0855370:CDS
AGGAAGCTGTTAAAAGCGAC+CGG 0.578432 5_4:+48660108 None:intergenic
GAGAAAATTGAACTTGGACA+TGG 0.584945 5_4:+48659996 None:intergenic
ACCATCACTAAATCACCTCC+AGG 0.586523 5_4:-48659855 Msa0855370:CDS
TTCCCGCTGCCGGAAGTGGT+GGG 0.587633 5_4:+48660137 None:intergenic
ATACAAAATCTTGCTGTCCA+CGG 0.587784 5_4:+48649410 None:intergenic
ATCGGTTACCGTTACAGTCA+CGG 0.590525 5_4:-48660053 Msa0855370:CDS
TGATTGGTTGAATACTGCCA+CGG 0.594998 5_4:-48657443 Msa0855370:CDS
AGACTTCCGTAAACTCTCAA+GGG 0.595043 5_4:+48651278 None:intergenic
ATATCCAATCAACACTGCCA+TGG 0.596395 5_4:+48657366 None:intergenic
TTTCTTACACTTCCAGAATG+GGG 0.596447 5_4:+48651647 None:intergenic
TTCTGTTACCGTGACTGTAA+CGG 0.597242 5_4:+48660045 None:intergenic
AGTCTAGCACTCAATATACA+AGG 0.598470 5_4:+48649318 None:intergenic
TCAGCAATTTGACCACCACC+TGG 0.600283 5_4:+48659837 None:intergenic
ACTAAATCACCTCCAGGTGG+TGG 0.601225 5_4:-48659849 Msa0855370:CDS
GGAAGATATGCACAGCTTTG+GGG 0.602281 5_4:-48649743 Msa0855370:CDS
CTAGTATCTTTCTTTCTGTG+AGG 0.603754 5_4:+48652288 None:intergenic
GAAAACTCGTGATAGTGTCA+TGG 0.607580 5_4:+48650944 None:intergenic
AGAAAGAGATGCTTTATCTG+AGG 0.613343 5_4:+48660210 None:intergenic
GCAAAATAAGCAGTATACAC+TGG 0.616802 5_4:+48649293 None:intergenic
ATTGTTGGGACTAGTGGAAG+TGG 0.622893 5_4:-48652224 Msa0855370:intron
AGGCATACCTCTAATATGGT+AGG 0.623046 5_4:+48656366 None:intergenic
ATGAATGGCACAATGACTGT+TGG 0.624773 5_4:-48655286 Msa0855370:CDS
AATGGAAAGATGGTTGAGCA+TGG 0.626094 5_4:-48649794 Msa0855370:CDS
CCCTCGTTCTCCCACAACAG+TGG 0.627489 5_4:+48650909 None:intergenic
TTAGATGATATCGAAGGTCA+AGG 0.630784 5_4:+48656745 None:intergenic
ATTGATACAGCCATCAAAGT+GGG 0.631411 5_4:-48649695 Msa0855370:CDS
CCGGCTTTCAGCAACAGAAG+AGG 0.632017 5_4:-48651101 Msa0855370:CDS
ACCTGGAGGTGATTTAGTGA+TGG 0.632148 5_4:+48659854 None:intergenic
AACACTGGATCACTAAACAA+TGG 0.633161 5_4:+48649586 None:intergenic
AACGGCGTACCTTGAAGCAG+CGG 0.638230 5_4:+48660160 None:intergenic
AAGAGCAGTACTAAATATAG+CGG 0.639907 5_4:+48655342 None:intergenic
CGATTCTGGTGGGAATTGAG+TGG 0.641250 5_4:+48660072 None:intergenic
AGCCTCTAAGGTTTAATGGG+GGG 0.642193 5_4:-48653106 Msa0855370:CDS
TAACGGTAACCGATTCTGGT+GGG 0.645271 5_4:+48660062 None:intergenic
CTCATCACACTGCATTGCAG+TGG 0.646215 5_4:+48650164 None:intergenic
AACTGATTGTGGCAGAACTG+CGG 0.647147 5_4:-48657043 Msa0855370:intron
ACACCACCAAGGAAATAGAG+TGG 0.647574 5_4:+48654965 None:intergenic
AATATATGCAGCAACTGACA+GGG 0.647725 5_4:+48656100 None:intergenic
TACCTCAAGTAACTGAAACA+TGG 0.647937 5_4:+48654904 None:intergenic
TCCAATCAACACTGCCATGG+GGG 0.650176 5_4:+48657369 None:intergenic
GGTGGGAATTGAGTGGCCTG+TGG 0.652594 5_4:+48660079 None:intergenic
AAAGCCTCTAAGGTTTAATG+GGG 0.652819 5_4:-48653108 Msa0855370:CDS
GTAACGGTAACCGATTCTGG+TGG 0.654765 5_4:+48660061 None:intergenic
AAGCCTCTAAGGTTTAATGG+GGG 0.660671 5_4:-48653107 Msa0855370:CDS
GCTTTCAGCAACAGAAGAGG+AGG 0.661756 5_4:-48651098 Msa0855370:intron
TACATGTGTGTCATGTTGTG+GGG 0.663264 5_4:-48660312 Msa0855370:five_prime_UTR
TTTGCTAAGAGCACTTCATG+TGG 0.665476 5_4:+48649770 None:intergenic
ATTAGAATCACTTCTTTACG+AGG 0.665784 5_4:+48649211 None:intergenic
CACTGCAATGCAGTGTGATG+AGG 0.671303 5_4:-48650163 Msa0855370:intron
TTGAAAGAGAGAAGTTTGTG+TGG 0.671320 5_4:-48660348 Msa0855370:five_prime_UTR
ATCCAATCAACACTGCCATG+GGG 0.677898 5_4:+48657368 None:intergenic
CATACCTTAGATGATATCGA+AGG 0.682222 5_4:+48656739 None:intergenic
CCACTGTTGTGGGAGAACGA+GGG 0.687524 5_4:-48650909 Msa0855370:CDS
TTAAGTCGAACAATTGATCG+TGG 0.689325 5_4:-48656438 Msa0855370:CDS
AATTGATACAGCCATCAAAG+TGG 0.690779 5_4:-48649696 Msa0855370:CDS
TACTATGTTGAACAACGTAG+AGG 0.691074 5_4:+48656389 None:intergenic
ATGGATTGCTGCTTTCCGGG+CGG 0.692123 5_4:+48650963 None:intergenic
AACAACACTAGCATTGCCCG+TGG 0.713368 5_4:+48657426 None:intergenic
GCAATTTGACCACCACCTGG+AGG 0.730091 5_4:+48659840 None:intergenic
ATCACTAAATCACCTCCAGG+TGG 0.737032 5_4:-48659852 Msa0855370:CDS
TTGCACGATAAACACCACCA+AGG 0.767423 5_4:+48654954 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATATTGTTAGTATAA+AGG + chr5_4:48650188-48650207 None:intergenic 10.0%
!! ATTAGAAAATATTATATACT+CGG + chr5_4:48656199-48656218 None:intergenic 10.0%
!!! TTTAATTTTAAGATTGTTAT+GGG - chr5_4:48656590-48656609 Msa0855370:intron 10.0%
!! AAATTCTAATGAAAAATAAA+GGG + chr5_4:48657496-48657515 None:intergenic 10.0%
!! AAAATTCTAATGAAAAATAA+AGG + chr5_4:48657497-48657516 None:intergenic 10.0%
!! TAAATTCATACATAATTTAT+TGG - chr5_4:48660033-48660052 Msa0855370:CDS 10.0%
!!! TTTTTATTTATATTTGAGAC+CGG + chr5_4:48649937-48649956 None:intergenic 15.0%
!!! TATTTTATTTTAGGAGATTA+TGG - chr5_4:48650096-48650115 Msa0855370:intron 15.0%
!! TAATTATATATGTAACAAAC+TGG - chr5_4:48651498-48651517 Msa0855370:intron 15.0%
!!! ATTTTCTATTTTTCCTTTTT+TGG - chr5_4:48651579-48651598 Msa0855370:intron 15.0%
!!! TTTTCTATTTTTCCTTTTTT+GGG - chr5_4:48651580-48651599 Msa0855370:intron 15.0%
!!! TTTAGAGTAAATATACAATT+TGG + chr5_4:48651744-48651763 None:intergenic 15.0%
!! AATGGTATTTATAAATGAAA+TGG - chr5_4:48652202-48652221 Msa0855370:intron 15.0%
!! ACAAAATACTGAAAAAAAAA+AGG - chr5_4:48652909-48652928 Msa0855370:intron 15.0%
!! ACAAATACATTAAATCAAAA+AGG + chr5_4:48654404-48654423 None:intergenic 15.0%
!!! TAACTTTTTAAAGTTTAATG+TGG + chr5_4:48654641-48654660 None:intergenic 15.0%
!!! GAATTTTGAAATAATTAGTT+TGG - chr5_4:48654824-48654843 Msa0855370:intron 15.0%
!! TTTCATATCATTTCAAAATT+TGG - chr5_4:48655484-48655503 Msa0855370:intron 15.0%
!! ATTGAATTATTTAACTGAAT+TGG - chr5_4:48655851-48655870 Msa0855370:intron 15.0%
!! ATATATTGAACATATAAACT+TGG + chr5_4:48655888-48655907 None:intergenic 15.0%
!! TGTTCAATATATTAATTAGT+TGG - chr5_4:48655896-48655915 Msa0855370:intron 15.0%
!!! GTTTAATTTTAAGATTGTTA+TGG - chr5_4:48656589-48656608 Msa0855370:intron 15.0%
!! GTTAATTCTTATTGAAATTA+TGG + chr5_4:48656807-48656826 None:intergenic 15.0%
!! AGTACATAAATATAAATACA+AGG + chr5_4:48656894-48656913 None:intergenic 15.0%
!! ACAGTTATATTTGTATTATA+AGG + chr5_4:48657040-48657059 None:intergenic 15.0%
!!! TTTTCATTAGAATTTTTTTG+AGG - chr5_4:48657501-48657520 Msa0855370:intron 15.0%
!!! ATTAATTATTTTATGCTTAC+AGG - chr5_4:48658520-48658539 Msa0855370:intron 15.0%
!! TTATTTACAGTATTACATTA+GGG + chr5_4:48658926-48658945 None:intergenic 15.0%
!! TTTATTTACAGTATTACATT+AGG + chr5_4:48658927-48658946 None:intergenic 15.0%
!!! CAAAAGATTTTTTTTTTGTT+TGG - chr5_4:48659673-48659692 Msa0855370:intron 15.0%
!! TTTATAGAGAAAATTGAACT+TGG + chr5_4:48649528-48649547 None:intergenic 20.0%
!!! TCTTTACTTATATTTGAGAT+CGG - chr5_4:48650021-48650040 Msa0855370:intron 20.0%
!! AAAGTAGTTAATATCCAATT+TGG - chr5_4:48650127-48650146 Msa0855370:intron 20.0%
!! AGTTACAAAAAAACATTGTA+TGG - chr5_4:48650474-48650493 Msa0855370:CDS 20.0%
!!! AACAAGGTTATTCAAAATTT+TGG - chr5_4:48650534-48650553 Msa0855370:intron 20.0%
!! ATTTGAATATCCAACAATAT+TGG + chr5_4:48651113-48651132 None:intergenic 20.0%
!!! TCAAGTTATTGTATTTTGAT+TGG - chr5_4:48651172-48651191 Msa0855370:intron 20.0%
!! ATTCTCTCTTGTATATAAAT+TGG - chr5_4:48651605-48651624 Msa0855370:intron 20.0%
!!! CTGATATGTAAAAGTATTTT+CGG - chr5_4:48652577-48652596 Msa0855370:intron 20.0%
!!! TTTTATTATATGAACAGTTC+TGG - chr5_4:48652638-48652657 Msa0855370:intron 20.0%
!! ATTCTGTGATTATGAAAAAT+AGG + chr5_4:48652675-48652694 None:intergenic 20.0%
!! TGATTCACTTATTAATTATG+AGG - chr5_4:48653744-48653763 Msa0855370:intron 20.0%
!! GCATAAATCAATTAAAGTAT+TGG + chr5_4:48653791-48653810 None:intergenic 20.0%
!!! TTCTTTTATTGTATTACAGA+CGG - chr5_4:48653858-48653877 Msa0855370:intron 20.0%
!!! TAGCAACTTTTAAAAAATCT+TGG - chr5_4:48653978-48653997 Msa0855370:intron 20.0%
!!! AGATTTCTTAAGCTTTATTT+AGG + chr5_4:48654058-48654077 None:intergenic 20.0%
!!! AAATAATTAGTTTGGATTAG+AGG - chr5_4:48654832-48654851 Msa0855370:intron 20.0%
!!! AATAATTAGTTTGGATTAGA+GGG - chr5_4:48654833-48654852 Msa0855370:intron 20.0%
!! AGGTTGTAATATATATTCAT+AGG - chr5_4:48654858-48654877 Msa0855370:intron 20.0%
!! TTGTAATATATATTCATAGG+AGG - chr5_4:48654861-48654880 Msa0855370:intron 20.0%
!!! TAATAGATTTGTTTGATCTA+TGG - chr5_4:48655456-48655475 Msa0855370:intron 20.0%
!! TATCATTTCAAAATTTGGAA+TGG - chr5_4:48655489-48655508 Msa0855370:intron 20.0%
!!! ATCATTTCAAAATTTGGAAT+GGG - chr5_4:48655490-48655509 Msa0855370:intron 20.0%
!!! CTCATTTTTTAGATTGAATT+TGG + chr5_4:48655759-48655778 None:intergenic 20.0%
!! TCTAAAAAATGAGTGTATTA+AGG - chr5_4:48655766-48655785 Msa0855370:intron 20.0%
!!! ATATTATTCACTGTTATTTC+TGG - chr5_4:48656036-48656055 Msa0855370:intron 20.0%
!! TCTTTGTATAATTCTAACAT+AGG + chr5_4:48656068-48656087 None:intergenic 20.0%
!!! TTACAATTTTCCTCAAATTT+TGG - chr5_4:48656246-48656265 Msa0855370:intron 20.0%
!! TAAAATGTACATTCTCAAAT+TGG + chr5_4:48656440-48656459 None:intergenic 20.0%
!!! AATTTGAGAATGTACATTTT+AGG - chr5_4:48656439-48656458 Msa0855370:CDS 20.0%
!!! GTTTGATTTGCTTAAAAATT+TGG - chr5_4:48656535-48656554 Msa0855370:intron 20.0%
!! AAAAATTTGGTACTTGAAAA+AGG - chr5_4:48656548-48656567 Msa0855370:intron 20.0%
!!! TTTTAAGTAGTGTTTACATT+GGG + chr5_4:48656687-48656706 None:intergenic 20.0%
!!! ATTTTAAGTAGTGTTTACAT+TGG + chr5_4:48656688-48656707 None:intergenic 20.0%
!! GAATTGAGTTTATGTAATTA+CGG - chr5_4:48656844-48656863 Msa0855370:intron 20.0%
!!! TTCTAAAACATGAAATGTAT+CGG - chr5_4:48657699-48657718 Msa0855370:intron 20.0%
!!! TTTTATACATCTGTACTATA+TGG - chr5_4:48657979-48657998 Msa0855370:intron 20.0%
!! ATATTTCATAACATTCACTA+TGG - chr5_4:48658391-48658410 Msa0855370:intron 20.0%
!!! TACCATATATGCAATTTTAT+TGG - chr5_4:48658668-48658687 Msa0855370:intron 20.0%
!!! CATTGATAGCTAAATTTTAA+GGG + chr5_4:48658764-48658783 None:intergenic 20.0%
!! CTTAAAATTTAGCTATCAAT+GGG - chr5_4:48658763-48658782 Msa0855370:intron 20.0%
!! TATTCTGATCATATATATTC+TGG - chr5_4:48659069-48659088 Msa0855370:intron 20.0%
!! ATTCTGATCATATATATTCT+GGG - chr5_4:48659070-48659089 Msa0855370:intron 20.0%
!!! ATCACATCAATTTTCTATAA+AGG - chr5_4:48660001-48660020 Msa0855370:CDS 20.0%
!! TGAATAATGTAAAAAATCAG+CGG + chr5_4:48660247-48660266 None:intergenic 20.0%
! ATAATCTTGAATTTCAGCTT+CGG - chr5_4:48649745-48649764 Msa0855370:CDS 25.0%
!! TTTCATTCTAAAAGCTAACT+CGG + chr5_4:48649888-48649907 None:intergenic 25.0%
!!! TCAAACAAAGTTGATGTATT+TGG + chr5_4:48649990-48650009 None:intergenic 25.0%
! AATAATTTCAGAGACCAAAT+TGG + chr5_4:48650144-48650163 None:intergenic 25.0%
!!! TTGGTCTCTGAAATTATTAT+AGG - chr5_4:48650146-48650165 Msa0855370:intron 25.0%
! TCCTTATAAATACCAATAGA+CGG + chr5_4:48650249-48650268 None:intergenic 25.0%
! GGATTATAATGACATTATGT+TGG - chr5_4:48650266-48650285 Msa0855370:CDS 25.0%
!!! GTCTGTTTTGTTATTTTCTT+GGG - chr5_4:48650730-48650749 Msa0855370:intron 25.0%
! CTAACAGAATACGAAATATA+TGG + chr5_4:48650971-48650990 None:intergenic 25.0%
! GGATCTTTACGTATATTAAA+AGG - chr5_4:48651047-48651066 Msa0855370:intron 25.0%
!!! AGTTATTGTATTTTGATTGG+AGG - chr5_4:48651175-48651194 Msa0855370:intron 25.0%
! TATCAAACATAAGTTCCATA+GGG + chr5_4:48651302-48651321 None:intergenic 25.0%
! TTATCAAACATAAGTTCCAT+AGG + chr5_4:48651303-48651322 None:intergenic 25.0%
! GTTACATATATAATTACCTG+AGG + chr5_4:48651494-48651513 None:intergenic 25.0%
!!! ATTTTGGAAAATTGATAACG+TGG - chr5_4:48651681-48651700 Msa0855370:CDS 25.0%
! TGTTCAAAAGAGCTTATAAA+AGG + chr5_4:48651828-48651847 None:intergenic 25.0%
! AATATGTGCTTATCTTATCA+TGG + chr5_4:48651869-48651888 None:intergenic 25.0%
! AACTATTTAACATTCTGTTG+TGG - chr5_4:48651928-48651947 Msa0855370:intron 25.0%
!!! AAAAGCATCTACATCAATAT+TGG + chr5_4:48652387-48652406 None:intergenic 25.0%
! TTAAATGATTCAACTGATTG+TGG - chr5_4:48652461-48652480 Msa0855370:intron 25.0%
! TTTCATAATCACAGAATAGT+TGG - chr5_4:48652678-48652697 Msa0855370:intron 25.0%
! CAAGAAAACTAAGAAAAGAA+AGG - chr5_4:48652866-48652885 Msa0855370:intron 25.0%
! TCTAAACATGAAAATGTGTT+TGG - chr5_4:48653481-48653500 Msa0855370:intron 25.0%
! AAAAGTCAAATGAAGTACAA+AGG + chr5_4:48653561-48653580 None:intergenic 25.0%
!!! TGCTGTTTTTATCTTCAATT+TGG - chr5_4:48653808-48653827 Msa0855370:intron 25.0%
!!! TCATCCTTTTTTTTTTTGCA+GGG - chr5_4:48654092-48654111 Msa0855370:intron 25.0%
! TCAAATTAAATTCTATGTCG+AGG - chr5_4:48654270-48654289 Msa0855370:intron 25.0%
! CAAATTAAATTCTATGTCGA+GGG - chr5_4:48654271-48654290 Msa0855370:intron 25.0%
!!! TGTGTTTTGCTATTATATTG+AGG - chr5_4:48654335-48654354 Msa0855370:intron 25.0%
! ACAAAATTGACAAAAATCAC+CGG + chr5_4:48654373-48654392 None:intergenic 25.0%
! CAGGTCATGATTATTAAATA+TGG + chr5_4:48654469-48654488 None:intergenic 25.0%
! CATATTTAATAATCATGACC+TGG - chr5_4:48654467-48654486 Msa0855370:intron 25.0%
! ATTGAGTTAGATTATAATCC+AGG + chr5_4:48654488-48654507 None:intergenic 25.0%
! TATAATCTAACTCAATATGC+AGG - chr5_4:48654492-48654511 Msa0855370:intron 25.0%
!!! CTTTTTAAAGTTTAATGTGG+AGG + chr5_4:48654638-48654657 None:intergenic 25.0%
! ATTCTAAATGTGTATGCTTA+TGG - chr5_4:48654672-48654691 Msa0855370:intron 25.0%
! AAATCGAGTAGCAAATAATT+GGG + chr5_4:48654791-48654810 None:intergenic 25.0%
! AAAATCGAGTAGCAAATAAT+TGG + chr5_4:48654792-48654811 None:intergenic 25.0%
!!! ACTCGATTTTTTTCGTTAAT+CGG - chr5_4:48654802-48654821 Msa0855370:intron 25.0%
! AATATATATTCATAGGAGGA+AGG - chr5_4:48654865-48654884 Msa0855370:intron 25.0%
! ATATATATTCATAGGAGGAA+GGG - chr5_4:48654866-48654885 Msa0855370:intron 25.0%
!!! TTTGTTTTTGTGGTTGAATT+AGG + chr5_4:48655229-48655248 None:intergenic 25.0%
! GATCAAACAAATCTATTAGT+GGG + chr5_4:48655454-48655473 None:intergenic 25.0%
! AGATCAAACAAATCTATTAG+TGG + chr5_4:48655455-48655474 None:intergenic 25.0%
!!! ACATATTTTAGGATGCTTTT+GGG + chr5_4:48655524-48655543 None:intergenic 25.0%
! TGGTCATATATACTTTAATG+TGG - chr5_4:48655575-48655594 Msa0855370:intron 25.0%
! GGTCATATATACTTTAATGT+GGG - chr5_4:48655576-48655595 Msa0855370:intron 25.0%
!! GAAAATCCCTTTTTATCAAT+AGG - chr5_4:48655815-48655834 Msa0855370:CDS 25.0%
! ATTCTGCCTATTGATAAAAA+GGG + chr5_4:48655824-48655843 None:intergenic 25.0%
! TATTCTGCCTATTGATAAAA+AGG + chr5_4:48655825-48655844 None:intergenic 25.0%
! CATATAAACTTGGAAGAAAA+AGG + chr5_4:48655878-48655897 None:intergenic 25.0%
! GCATTTATTCGAATAAATGA+AGG + chr5_4:48656272-48656291 None:intergenic 25.0%
! AAGATTGCGAATTAAGAATT+TGG + chr5_4:48656752-48656771 None:intergenic 25.0%
! TACTCTATATAATATTCGCT+AGG - chr5_4:48656910-48656929 Msa0855370:intron 25.0%
! AATTCATTTCCTAATAGACA+TGG - chr5_4:48657090-48657109 Msa0855370:intron 25.0%
! TACAAATTTCCATGTCTATT+AGG + chr5_4:48657102-48657121 None:intergenic 25.0%
! GCAAGTAAGAAATTTCATAA+TGG + chr5_4:48657326-48657345 None:intergenic 25.0%
! TTAGTGATATAGTGCTAAAA+GGG + chr5_4:48657420-48657439 None:intergenic 25.0%
! ATTAGTGATATAGTGCTAAA+AGG + chr5_4:48657421-48657440 None:intergenic 25.0%
!! ATTATTGTTTCACCTTTTCT+TGG - chr5_4:48657529-48657548 Msa0855370:intron 25.0%
!! AATGTATCGGTATTCAAATT+TGG - chr5_4:48657712-48657731 Msa0855370:intron 25.0%
! ATCAAATGTCATATATAGCA+TGG + chr5_4:48657925-48657944 None:intergenic 25.0%
!! TAGAGTGTCTTAAATCATTA+TGG - chr5_4:48658039-48658058 Msa0855370:intron 25.0%
!!! TGAATGACTAGTTTAAAGAT+TGG - chr5_4:48658111-48658130 Msa0855370:intron 25.0%
!! GTAGTTGCCTTTTATATTAA+AGG - chr5_4:48658133-48658152 Msa0855370:intron 25.0%
!!! AAGAGCACCTTTAATATAAA+AGG + chr5_4:48658143-48658162 None:intergenic 25.0%
! AGATAGATGATCAAGATATT+CGG - chr5_4:48658207-48658226 Msa0855370:intron 25.0%
! CTTTACAAATTTCCTTTGTT+AGG - chr5_4:48658477-48658496 Msa0855370:intron 25.0%
! TTAATAAGCTAAGAACATGT+TGG + chr5_4:48658505-48658524 None:intergenic 25.0%
! TGCCAATAAAATTGCATATA+TGG + chr5_4:48658673-48658692 None:intergenic 25.0%
!!! CCATTGATAGCTAAATTTTA+AGG + chr5_4:48658765-48658784 None:intergenic 25.0%
! CCTTAAAATTTAGCTATCAA+TGG - chr5_4:48658762-48658781 Msa0855370:intron 25.0%
! TTCTGATCATATATATTCTG+GGG - chr5_4:48659071-48659090 Msa0855370:intron 25.0%
! ACAAAATTGAGAACTGTTAA+AGG + chr5_4:48659404-48659423 None:intergenic 25.0%
! TCGATTAGTAATCTATATGT+TGG - chr5_4:48659534-48659553 Msa0855370:intron 25.0%
!! CAATATTCAGATCATTGTTT+TGG - chr5_4:48659696-48659715 Msa0855370:intron 25.0%
!! CATAATTTATTGGTGTTCAA+AGG - chr5_4:48660043-48660062 Msa0855370:CDS 25.0%
! CATTTTTCTTCAGGGAATAT+TGG + chr5_4:48649331-48649350 None:intergenic 30.0%
! TGATGATGATGATGATGAAT+TGG + chr5_4:48649562-48649581 None:intergenic 30.0%
GGTAACTAATAAGGGATTTA+AGG + chr5_4:48649713-48649732 None:intergenic 30.0%
AATCCCTTATTAGTTACCTT+TGG - chr5_4:48649715-48649734 Msa0855370:CDS 30.0%
CATCCAAAGGTAACTAATAA+GGG + chr5_4:48649721-48649740 None:intergenic 30.0%
TCATCCAAAGGTAACTAATA+AGG + chr5_4:48649722-48649741 None:intergenic 30.0%
CAAGATTATCTTTCATCCAA+AGG + chr5_4:48649734-48649753 None:intergenic 30.0%
TAATCTTGAATTTCAGCTTC+GGG - chr5_4:48649746-48649765 Msa0855370:CDS 30.0%
!!! TTTTTTACTTGTTGGAGCTA+AGG - chr5_4:48649782-48649801 Msa0855370:CDS 30.0%
TGTTGTTGAATGTATACATG+TGG - chr5_4:48649855-48649874 Msa0855370:intron 30.0%
! TAGTAACTTTTAAATGGGCA+TGG + chr5_4:48649912-48649931 None:intergenic 30.0%
! CGGAGTAGTAACTTTTAAAT+GGG + chr5_4:48649917-48649936 None:intergenic 30.0%
CCATTTAAAAGTTACTACTC+CGG - chr5_4:48649915-48649934 Msa0855370:intron 30.0%
GTTAGTATAAAGGACTAGAT+CGG + chr5_4:48650178-48650197 None:intergenic 30.0%
TATAAATACCAATAGACGGA+TGG + chr5_4:48650245-48650264 None:intergenic 30.0%
TCCGTCTATTGGTATTTATA+AGG - chr5_4:48650245-48650264 Msa0855370:CDS 30.0%
!! ATTATGTTGGTATTGACTTC+TGG - chr5_4:48650279-48650298 Msa0855370:CDS 30.0%
TGAACAAAGTCGTTATATTG+TGG - chr5_4:48650607-48650626 Msa0855370:intron 30.0%
CACTTTCTTACCAAAGATTT+CGG - chr5_4:48650708-48650727 Msa0855370:intron 30.0%
!!! GGTCTGTTTTGTTATTTTCT+TGG - chr5_4:48650729-48650748 Msa0855370:intron 30.0%
!! ATGAAGACATTGCTATTTCT+CGG - chr5_4:48650772-48650791 Msa0855370:intron 30.0%
TCTTGATATCTTGAAAGAGA+AGG - chr5_4:48650806-48650825 Msa0855370:intron 30.0%
ATTCTTGATTGTAAACCAGT+TGG - chr5_4:48650829-48650848 Msa0855370:intron 30.0%
TTATGTAGAAGCTTCACATT+AGG + chr5_4:48650872-48650891 None:intergenic 30.0%
ACGTATATTAAAAGGTCACT+TGG - chr5_4:48651055-48651074 Msa0855370:intron 30.0%
CGTATATTAAAAGGTCACTT+GGG - chr5_4:48651056-48651075 Msa0855370:intron 30.0%
TTGGATATTCAAATGCAGAT+TGG - chr5_4:48651119-48651138 Msa0855370:CDS 30.0%
TGGATATTCAAATGCAGATT+GGG - chr5_4:48651120-48651139 Msa0855370:CDS 30.0%
ATTCAACCATAAAAGTTCAC+AGG + chr5_4:48651244-48651263 None:intergenic 30.0%
! GAGTTGAAATTTTATGAGCT+AGG - chr5_4:48651276-48651295 Msa0855370:CDS 30.0%
TAAATCCTCTCTTGAAAAAC+AGG + chr5_4:48651354-48651373 None:intergenic 30.0%
!! AGGTTTTAATGATGTCAGAA+AGG + chr5_4:48651415-48651434 None:intergenic 30.0%
ATTATTTGAGCTCATTGAAG+AGG + chr5_4:48651435-48651454 None:intergenic 30.0%
! ATTATTCACCTCGATCATTT+TGG - chr5_4:48651665-48651684 Msa0855370:CDS 30.0%
! TCAATTTTCCAAAATGATCG+AGG + chr5_4:48651676-48651695 None:intergenic 30.0%
CGTGGAAAACTAAATTGATA+CGG - chr5_4:48651699-48651718 Msa0855370:intron 30.0%
ATACGGTCCTATATAATTTC+AGG - chr5_4:48651716-48651735 Msa0855370:intron 30.0%
TACGGTCCTATATAATTTCA+GGG - chr5_4:48651717-48651736 Msa0855370:intron 30.0%
TTTGGTCCCTGAAATTATAT+AGG + chr5_4:48651726-48651745 None:intergenic 30.0%
CCACAACACAATAAATAAGA+GGG + chr5_4:48651906-48651925 None:intergenic 30.0%
ACCACAACACAATAAATAAG+AGG + chr5_4:48651907-48651926 None:intergenic 30.0%
! GGATTATTGACTATTGTTGT+TGG - chr5_4:48651949-48651968 Msa0855370:intron 30.0%
! TTGACTATTGTTGTTGGTAA+TGG - chr5_4:48651955-48651974 Msa0855370:intron 30.0%
ATTGGAATGCCAATATCTAA+TGG + chr5_4:48652369-48652388 None:intergenic 30.0%
GAATGAATCTTGAAAAACCA+AGG + chr5_4:48652428-48652447 None:intergenic 30.0%
! AATTCGTTTAGTTTCAAGGA+AGG - chr5_4:48652527-48652546 Msa0855370:intron 30.0%
CTGTGATTATGAAAAATAGG+TGG + chr5_4:48652672-48652691 None:intergenic 30.0%
! ATGCAGAAAAGAAGCATAAA+TGG + chr5_4:48652986-48653005 None:intergenic 30.0%
CGACTAAAAAGAAAAAAGCT+AGG + chr5_4:48653044-48653063 None:intergenic 30.0%
!! TTTCTTTTTAGTCGAGAAAC+TGG - chr5_4:48653050-48653069 Msa0855370:intron 30.0%
TCAACTAGTGTAGATCATTT+AGG - chr5_4:48653209-48653228 Msa0855370:intron 30.0%
!!! GTATCTTAATTTTGACTTCC+TGG - chr5_4:48653258-48653277 Msa0855370:intron 30.0%
TTAATGAAAACATAGACACC+AGG + chr5_4:48653279-48653298 None:intergenic 30.0%
! TTTTACACTTTCTATCACAC+AGG - chr5_4:48653440-48653459 Msa0855370:intron 30.0%
TTCATGTTTAGATCAGTTCA+AGG + chr5_4:48653473-48653492 None:intergenic 30.0%
!!! TGCTCTTTTGTTTTCGTTTT+TGG - chr5_4:48653504-48653523 Msa0855370:intron 30.0%
TTCAATTTGGTTATCGCTAT+GGG - chr5_4:48653821-48653840 Msa0855370:intron 30.0%
GTACCTAAAGAGTAAGTAAT+TGG - chr5_4:48653927-48653946 Msa0855370:intron 30.0%
GAACCAATTACTTACTCTTT+AGG + chr5_4:48653933-48653952 None:intergenic 30.0%
! AGAGTAAGTAATTGGTTCTT+TGG - chr5_4:48653935-48653954 Msa0855370:intron 30.0%
!!! CTCATCCTTTTTTTTTTTGC+AGG - chr5_4:48654091-48654110 Msa0855370:intron 30.0%
CATACCCTGCAAAAAAAAAA+AGG + chr5_4:48654099-48654118 None:intergenic 30.0%
!!! TTTTTTTTTTGCAGGGTATG+AGG - chr5_4:48654099-48654118 Msa0855370:intron 30.0%
AAGAGCAGTACTAAATATAG+CGG + chr5_4:48654176-48654195 None:intergenic 30.0%
!! CGTCATTTTGGAGATAATTA+TGG - chr5_4:48654906-48654925 Msa0855370:intron 30.0%
TACACACATAAAGTCAAGAA+TGG - chr5_4:48655041-48655060 Msa0855370:intron 30.0%
! TTCTCCAACTACATAGTTTT+CGG + chr5_4:48655085-48655104 None:intergenic 30.0%
TATGTAGTTGGAGAAAATCA+AGG - chr5_4:48655090-48655109 Msa0855370:intron 30.0%
!!! ACTACATGAGTTTGTTTTTG+TGG + chr5_4:48655239-48655258 None:intergenic 30.0%
! AGATTTGTTTGATCTATGGT+AGG - chr5_4:48655460-48655479 Msa0855370:intron 30.0%
!!! CATATTTTAGGATGCTTTTG+GGG + chr5_4:48655523-48655542 None:intergenic 30.0%
!!! CACATATTTTAGGATGCTTT+TGG + chr5_4:48655525-48655544 None:intergenic 30.0%
! AAAGCATCCTAAAATATGTG+AGG - chr5_4:48655525-48655544 Msa0855370:intron 30.0%
AGAGTAACACTTTATGAAGA+TGG - chr5_4:48655714-48655733 Msa0855370:intron 30.0%
!!! AAAAGGAAACATGCTGATTT+TGG - chr5_4:48656100-48656119 Msa0855370:CDS 30.0%
!!! CAAAGGTGTCAATTTTATGA+CGG - chr5_4:48656164-48656183 Msa0855370:CDS 30.0%
!!! AAAGGTGTCAATTTTATGAC+GGG - chr5_4:48656165-48656184 Msa0855370:intron 30.0%
TAAATGAAGGCCAAAATTTG+AGG + chr5_4:48656259-48656278 None:intergenic 30.0%
GTGTATGTGATCATATTTAC+TGG - chr5_4:48656293-48656312 Msa0855370:intron 30.0%
! CTTTTTCCTGTCACAATATT+AGG + chr5_4:48656362-48656381 None:intergenic 30.0%
TGGCATTATTATGGAGTAAA+GGG + chr5_4:48656476-48656495 None:intergenic 30.0%
AAAGTAAACTAAAGGAATGG+TGG + chr5_4:48656496-48656515 None:intergenic 30.0%
CCAAAAGTAAACTAAAGGAA+TGG + chr5_4:48656499-48656518 None:intergenic 30.0%
!! CCATTCCTTTAGTTTACTTT+TGG - chr5_4:48656496-48656515 Msa0855370:intron 30.0%
!! TTTACTTTTGGCCATCAAAT+AGG - chr5_4:48656508-48656527 Msa0855370:intron 30.0%
ATCAAACAGATCCTATTTGA+TGG + chr5_4:48656522-48656541 None:intergenic 30.0%
TTATGTAATTACGGCACTTA+AGG - chr5_4:48656853-48656872 Msa0855370:intron 30.0%
ACAGAAAGAAAGATACTAGA+TGG - chr5_4:48657231-48657250 Msa0855370:intron 30.0%
!! GTAAAAGTGTTGCAATTGTT+GGG - chr5_4:48657277-48657296 Msa0855370:intron 30.0%
ACAAAAAAAATTCCGACCAT+AGG + chr5_4:48657379-48657398 None:intergenic 30.0%
AAAGGGTAAAAATATAGCCA+CGG + chr5_4:48657403-48657422 None:intergenic 30.0%
TGAAAAATAAAGGGAAACAG+TGG + chr5_4:48657487-48657506 None:intergenic 30.0%
! TTGGTAACTTCGTTGAATAA+TGG - chr5_4:48657548-48657567 Msa0855370:intron 30.0%
TCGGTATTCAAATTTGGATA+TGG - chr5_4:48657718-48657737 Msa0855370:intron 30.0%
!!! TGGTGTTCTGTTTTATTTTC+TGG - chr5_4:48657738-48657757 Msa0855370:intron 30.0%
CATATTCATACATGATTGAC+AGG - chr5_4:48657805-48657824 Msa0855370:intron 30.0%
ATTTCTTACACTTCCAGAAT+GGG + chr5_4:48657872-48657891 None:intergenic 30.0%
TTGATGTTTACTGTCCTATT+TGG - chr5_4:48657940-48657959 Msa0855370:intron 30.0%
CAATTACATGTATCAAACCA+CGG + chr5_4:48658084-48658103 None:intergenic 30.0%
GATAGATGATCAAGATATTC+GGG - chr5_4:48658208-48658227 Msa0855370:intron 30.0%
TGTTTACTTACAGTATCTTG+TGG + chr5_4:48658275-48658294 None:intergenic 30.0%
CAAATGTATAGCAGTACAAA+AGG + chr5_4:48658445-48658464 None:intergenic 30.0%
TGAACAGTTGTAACTTGATA+TGG - chr5_4:48658718-48658737 Msa0855370:intron 30.0%
!! TGATAGCTAAATTTTAAGGG+AGG + chr5_4:48658761-48658780 None:intergenic 30.0%
AATTTAGCTATCAATGGGTA+AGG - chr5_4:48658768-48658787 Msa0855370:intron 30.0%
TTTACAGTATTACATTAGGG+AGG + chr5_4:48658923-48658942 None:intergenic 30.0%
! GACAATCTCTCAAATTTTCA+CGG - chr5_4:48658957-48658976 Msa0855370:intron 30.0%
!!! TGCTTTTTTTCACAGTTAAG+TGG - chr5_4:48658984-48659003 Msa0855370:intron 30.0%
!!! TTTTTTTCACAGTTAAGTGG+TGG - chr5_4:48658987-48659006 Msa0855370:intron 30.0%
AAATGACTCCTCTATCAAAA+TGG + chr5_4:48659145-48659164 None:intergenic 30.0%
GTAAATAAACAGCTAAACAC+TGG + chr5_4:48659437-48659456 None:intergenic 30.0%
TATTCCAGAACACATATAAC+TGG - chr5_4:48659504-48659523 Msa0855370:intron 30.0%
AAAACCAGTTATATGTGTTC+TGG + chr5_4:48659511-48659530 None:intergenic 30.0%
! TTTTGATGTAAGTCATGCAA+TGG + chr5_4:48659658-48659677 None:intergenic 30.0%
!!! CAGATCATTGTTTTGGAAAA+TGG - chr5_4:48659703-48659722 Msa0855370:intron 30.0%
!!! TGTTTTGGAAAATGGAAAGA+TGG - chr5_4:48659711-48659730 Msa0855370:intron 30.0%
AGTATCACATTCTTTATCCT+TGG - chr5_4:48659975-48659994 Msa0855370:CDS 30.0%
GTATCACATTCTTTATCCTT+GGG - chr5_4:48659976-48659995 Msa0855370:CDS 30.0%
AAAATTGATGTGATAACCCA+AGG + chr5_4:48659995-48660014 None:intergenic 30.0%
!! CTTGTTATTTAGAAGTGCTT+TGG + chr5_4:48660169-48660188 None:intergenic 30.0%
ATTAGAATCACTTCTTTACG+AGG + chr5_4:48660307-48660326 None:intergenic 30.0%
CACAAACTTCTCTCTTTCAA+AGG + chr5_4:48649167-48649186 None:intergenic 35.0%
TTGAAAGAGAGAAGTTTGTG+TGG - chr5_4:48649167-48649186 Msa0855370:three_prime_UTR 35.0%
AGTTTGTGTGGTGTTTGAAA+TGG - chr5_4:48649179-48649198 Msa0855370:three_prime_UTR 35.0%
ATACATGTGTGTCATGTTGT+GGG - chr5_4:48649202-48649221 Msa0855370:three_prime_UTR 35.0%
AGAAAGAGATGCTTTATCTG+AGG + chr5_4:48649308-48649327 None:intergenic 35.0%
GAGAAAATTGAACTTGGACA+TGG + chr5_4:48649522-48649541 None:intergenic 35.0%
!!! GCTGCAACTTTTTTACTTGT+TGG - chr5_4:48649774-48649793 Msa0855370:CDS 35.0%
AAGTTGTATTCAAGTCCCTA+AGG - chr5_4:48649830-48649849 Msa0855370:intron 35.0%
ACATTCAACAACACACCTTA+GGG + chr5_4:48649848-48649867 None:intergenic 35.0%
TACATTCAACAACACACCTT+AGG + chr5_4:48649849-48649868 None:intergenic 35.0%
! CCGGAGTAGTAACTTTTAAA+TGG + chr5_4:48649918-48649937 None:intergenic 35.0%
AGTAAAATCCATCCGTCTAT+TGG - chr5_4:48650234-48650253 Msa0855370:CDS 35.0%
ATGTAGATGATATTGTCCGT+AGG + chr5_4:48650418-48650437 None:intergenic 35.0%
!! TTGGTTCGGAAAATTCAACA+AGG - chr5_4:48650518-48650537 Msa0855370:CDS 35.0%
!! GGTTGAATAAGTGTTGCTTT+AGG + chr5_4:48650689-48650708 None:intergenic 35.0%
CGAAATCTTTGGTAAGAAAG+TGG + chr5_4:48650710-48650729 None:intergenic 35.0%
ACAAAACAGACCGAAATCTT+TGG + chr5_4:48650721-48650740 None:intergenic 35.0%
!! CTATAGAAGTATCAACCAAC+TGG + chr5_4:48650847-48650866 None:intergenic 35.0%
! GCATATAGATGAGGTTAGTT+GGG - chr5_4:48650918-48650937 Msa0855370:CDS 35.0%
TTTCTAAACTCACCTTGTGA+TGG - chr5_4:48651004-48651023 Msa0855370:intron 35.0%
TCATTCCAATTACCATCACA+AGG + chr5_4:48651019-48651038 None:intergenic 35.0%
!! TGACTTGTTTATTACGACAG+AGG - chr5_4:48651082-48651101 Msa0855370:intron 35.0%
AGAGGCTATACCAATATTGT+TGG - chr5_4:48651100-48651119 Msa0855370:CDS 35.0%
TTGGAGGAAACTTAATCTCA+TGG - chr5_4:48651191-48651210 Msa0855370:intron 35.0%
TAAAAGTTCACAGGTAGTGT+AGG + chr5_4:48651235-48651254 None:intergenic 35.0%
! ACACTACCTGTGAACTTTTA+TGG - chr5_4:48651235-48651254 Msa0855370:intron 35.0%
!!! CAAATCCTGTTTTTCAAGAG+AGG - chr5_4:48651346-48651365 Msa0855370:intron 35.0%
!! TAGAGGTTTGGTGAAGATAT+CGG + chr5_4:48651465-48651484 None:intergenic 35.0%
AAGAGAGAATCTCCCAAAAA+AGG + chr5_4:48651595-48651614 None:intergenic 35.0%
AAAGAGCTTAGAAAAGTAGC+TGG + chr5_4:48651796-48651815 None:intergenic 35.0%
! CCCTCTTATTTATTGTGTTG+TGG - chr5_4:48651903-48651922 Msa0855370:intron 35.0%
!!! GTGCTCTATTTTTGTCTTTC+AGG - chr5_4:48652009-48652028 Msa0855370:intron 35.0%
!!! CTTTCAGGTTTTGAATGTTC+AGG - chr5_4:48652024-48652043 Msa0855370:intron 35.0%
CTCCAAGCTTGAATAAGAAA+GGG + chr5_4:48652051-48652070 None:intergenic 35.0%
ACTCCAAGCTTGAATAAGAA+AGG + chr5_4:48652052-48652071 None:intergenic 35.0%
! TATTCAAGCTTGGAGTTGAT+TGG - chr5_4:48652056-48652075 Msa0855370:intron 35.0%
GACACATTAACTCATGAGTT+GGG + chr5_4:48652265-48652284 None:intergenic 35.0%
AGACACATTAACTCATGAGT+TGG + chr5_4:48652266-48652285 None:intergenic 35.0%
GAGTTAATGTGTCTAACTTG+AGG - chr5_4:48652272-48652291 Msa0855370:CDS 35.0%
GATTCTCCTCCATTAGATAT+TGG - chr5_4:48652357-48652376 Msa0855370:intron 35.0%
!!! TGTTTTCTAAGGTAGCACTA+CGG - chr5_4:48652502-48652521 Msa0855370:intron 35.0%
! GGACAATTCGTTTAGTTTCA+AGG - chr5_4:48652523-48652542 Msa0855370:intron 35.0%
TAGTTGGTTGTATGATGTCA+CGG - chr5_4:48652694-48652713 Msa0855370:intron 35.0%
TGTTAGTATTTGACTGTTGC+AGG - chr5_4:48652728-48652747 Msa0855370:intron 35.0%
TTAGATGATATCGAAGGTCA+AGG + chr5_4:48652773-48652792 None:intergenic 35.0%
TTGACCTTCGATATCATCTA+AGG - chr5_4:48652772-48652791 Msa0855370:intron 35.0%
CATACCTTAGATGATATCGA+AGG + chr5_4:48652779-48652798 None:intergenic 35.0%
! CTTCGATATCATCTAAGGTA+TGG - chr5_4:48652777-48652796 Msa0855370:intron 35.0%
! ACAGATTAGCCATTTCTTCA+TGG + chr5_4:48652809-48652828 None:intergenic 35.0%
GGAGGAGAATATTATCTACT+GGG + chr5_4:48652965-48652984 None:intergenic 35.0%
TGGAGGAGAATATTATCTAC+TGG + chr5_4:48652966-48652985 None:intergenic 35.0%
! CAGAAAAGAAGCATAAATGG+AGG + chr5_4:48652983-48653002 None:intergenic 35.0%
AAAGAAAAAAGCTAGGTGAG+AGG + chr5_4:48653037-48653056 None:intergenic 35.0%
TTAAGTCGAACAATTGATCG+TGG - chr5_4:48653077-48653096 Msa0855370:CDS 35.0%
TACTATGTTGAACAACGTAG+AGG + chr5_4:48653129-48653148 None:intergenic 35.0%
CATAGTACCTACCATATTAG+AGG - chr5_4:48653142-48653161 Msa0855370:CDS 35.0%
GCAACAAGAAAAGAAAACTG+AGG + chr5_4:48653172-48653191 None:intergenic 35.0%
! GTGTAGATCATTTAGGATCA+CGG - chr5_4:48653216-48653235 Msa0855370:intron 35.0%
CATATCGATCCAGATATCTA+TGG - chr5_4:48653341-48653360 Msa0855370:intron 35.0%
ATCCAGATATCTATGGTATC+AGG - chr5_4:48653348-48653367 Msa0855370:intron 35.0%
TACCTGATACCATAGATATC+TGG + chr5_4:48653353-48653372 None:intergenic 35.0%
ATCTATGGTATCAGGTATAC+TGG - chr5_4:48653356-48653375 Msa0855370:intron 35.0%
!! AAAAGGTGCTCCATATTTGT+AGG + chr5_4:48653382-48653401 None:intergenic 35.0%
AATATATGCAGCAACTGACA+GGG + chr5_4:48653418-48653437 None:intergenic 35.0%
! TTGTTATTAGCCAACTGCAT+TGG - chr5_4:48653604-48653623 Msa0855370:intron 35.0%
AATTTAGTCCTCCACTGAAA+AGG + chr5_4:48653676-48653695 None:intergenic 35.0%
ATTCAGGAAAGCCATGAATA+AGG - chr5_4:48653693-48653712 Msa0855370:intron 35.0%
!! GTCATTATCAGCCTTATTCA+TGG + chr5_4:48653707-48653726 None:intergenic 35.0%
! TGATAATGACGCTAGTACTA+GGG - chr5_4:48653717-48653736 Msa0855370:intron 35.0%
CTTCAATTTGGTTATCGCTA+TGG - chr5_4:48653820-48653839 Msa0855370:intron 35.0%
! AGTCTTGCTTTGTTGAACTT+TGG - chr5_4:48654145-48654164 Msa0855370:intron 35.0%
!!! CAATGGTTTTGTGTTCTCAT+GGG - chr5_4:48654203-48654222 Msa0855370:intron 35.0%
AAATTGACAAAAATCACCGG+AGG + chr5_4:48654370-48654389 None:intergenic 35.0%
! AATATGCAGGTGATGGTAAA+TGG - chr5_4:48654505-48654524 Msa0855370:intron 35.0%
! ATATGCAGGTGATGGTAAAT+GGG - chr5_4:48654506-48654525 Msa0855370:intron 35.0%
AATAGAGTGGAAGAGATAGT+TGG + chr5_4:48654540-48654559 None:intergenic 35.0%
TACCTCAAGTAACTGAAACA+TGG + chr5_4:48654614-48654633 None:intergenic 35.0%
AAATGTAAGTGTTAGCCGTT+AGG - chr5_4:48654757-48654776 Msa0855370:intron 35.0%
TTTGGAGATAATTATGGCTG+TGG - chr5_4:48654912-48654931 Msa0855370:CDS 35.0%
ATAATTATGGCTGTGGAGAT+AGG - chr5_4:48654919-48654938 Msa0855370:CDS 35.0%
TAATTATGGCTGTGGAGATA+GGG - chr5_4:48654920-48654939 Msa0855370:CDS 35.0%
! TCGAAGTTCTTCAAGTTTGT+CGG - chr5_4:48654955-48654974 Msa0855370:CDS 35.0%
TACTAGCATTGTGAGAAATC+TGG + chr5_4:48654990-48655009 None:intergenic 35.0%
CCATGAAGAATTCCTATGAT+GGG + chr5_4:48655021-48655040 None:intergenic 35.0%
ACCATGAAGAATTCCTATGA+TGG + chr5_4:48655022-48655041 None:intergenic 35.0%
TAGTCAATCACAGCCAAAAA+TGG + chr5_4:48655122-48655141 None:intergenic 35.0%
AACTCTACTCCTCATTTGTA+GGG - chr5_4:48655320-48655339 Msa0855370:CDS 35.0%
! TGGCAATCCTCACATATTTT+AGG + chr5_4:48655535-48655554 None:intergenic 35.0%
AAGTAGTCCTTATAAGGCTT+TGG + chr5_4:48655555-48655574 None:intergenic 35.0%
! AAGCCTTATAAGGACTACTT+TGG - chr5_4:48655555-48655574 Msa0855370:intron 35.0%
TGACCAAAGTAGTCCTTATA+AGG + chr5_4:48655561-48655580 None:intergenic 35.0%
GAGGCTAATGTGAAATAATG+AGG - chr5_4:48655661-48655680 Msa0855370:intron 35.0%
! AACCAATTTCCTAGGTTTTG+CGG + chr5_4:48655689-48655708 None:intergenic 35.0%
AAGATGGAGTGTACTATACA+AGG - chr5_4:48655730-48655749 Msa0855370:intron 35.0%
AGATGGAGTGTACTATACAA+GGG - chr5_4:48655731-48655750 Msa0855370:intron 35.0%
TCTACTTTCTAATGAGCTTC+CGG - chr5_4:48655947-48655966 Msa0855370:intron 35.0%
GAATTATACAAAGACAGCCT+AGG - chr5_4:48656074-48656093 Msa0855370:intron 35.0%
! ATTTTGGATCCCATGACATT+TGG - chr5_4:48656116-48656135 Msa0855370:CDS 35.0%
! TTTTGGATCCCATGACATTT+GGG - chr5_4:48656117-48656136 Msa0855370:CDS 35.0%
! ACACCTTTGATAACTGATTC+CGG + chr5_4:48656153-48656172 None:intergenic 35.0%
GGAAAATTGTAATCTGACAC+AGG + chr5_4:48656238-48656257 None:intergenic 35.0%
TCCTGTCACAATATTAGGAA+TGG + chr5_4:48656357-48656376 None:intergenic 35.0%
ACAGGAAAAAGCAGACATTA+AGG - chr5_4:48656371-48656390 Msa0855370:intron 35.0%
AAGAAAATGCAAAGCCTCTA+AGG - chr5_4:48656397-48656416 Msa0855370:CDS 35.0%
!! CAAAGCCTCTAAGGTTTAAT+GGG - chr5_4:48656406-48656425 Msa0855370:CDS 35.0%
!! AAAGCCTCTAAGGTTTAATG+GGG - chr5_4:48656407-48656426 Msa0855370:CDS 35.0%
GTGGCATTATTATGGAGTAA+AGG + chr5_4:48656477-48656496 None:intergenic 35.0%
AAGGAATGGTGGCATTATTA+TGG + chr5_4:48656485-48656504 None:intergenic 35.0%
GATGGCCAAAAGTAAACTAA+AGG + chr5_4:48656504-48656523 None:intergenic 35.0%
TAATTACGGCACTTAAGGTA+AGG - chr5_4:48656858-48656877 Msa0855370:intron 35.0%
CTAGTATCTTTCTTTCTGTG+AGG + chr5_4:48657230-48657249 None:intergenic 35.0%
!! GGTAAAAGTGTTGCAATTGT+TGG - chr5_4:48657276-48657295 Msa0855370:intron 35.0%
!!! TCGGAATTTTTTTTGTTCCG+TGG - chr5_4:48657383-48657402 Msa0855370:CDS 35.0%
TCAACGAAGTTACCAAGAAA+AGG + chr5_4:48657544-48657563 None:intergenic 35.0%
AGATATCTGATGGAAGATCA+TGG - chr5_4:48657603-48657622 Msa0855370:intron 35.0%
! CAATGCAAAAGCATGATACA+TGG + chr5_4:48657641-48657660 None:intergenic 35.0%
! TCTGAATAGCATTCTGAGAA+GGG + chr5_4:48657839-48657858 None:intergenic 35.0%
! ATCTGAATAGCATTCTGAGA+AGG + chr5_4:48657840-48657859 None:intergenic 35.0%
!!! AGATTTTTTGATCCCCATTC+TGG - chr5_4:48657856-48657875 Msa0855370:intron 35.0%
TTTCTTACACTTCCAGAATG+GGG + chr5_4:48657871-48657890 None:intergenic 35.0%
CATTTCTTACACTTCCAGAA+TGG + chr5_4:48657873-48657892 None:intergenic 35.0%
TAATGACCATCGATCCAAAT+AGG + chr5_4:48657957-48657976 None:intergenic 35.0%
ATGTATCCCTTGAGAGTTTA+CGG - chr5_4:48658231-48658250 Msa0855370:intron 35.0%
AAACCTGAGTGATTATGTGT+AGG - chr5_4:48658351-48658370 Msa0855370:intron 35.0%
TTCATAACATTCACTATGGC+CGG - chr5_4:48658395-48658414 Msa0855370:intron 35.0%
AACATGTTGGAACCTAACAA+AGG + chr5_4:48658492-48658511 None:intergenic 35.0%
!! ACAACAGTGGAGTATTTTTC+AGG + chr5_4:48658596-48658615 None:intergenic 35.0%
TGAAAAATACTCCACTGTTG+TGG - chr5_4:48658595-48658614 Msa0855370:intron 35.0%
GAAAAATACTCCACTGTTGT+GGG - chr5_4:48658596-48658615 Msa0855370:intron 35.0%
CATCAAAGCACGATAAATAG+TGG + chr5_4:48658647-48658666 None:intergenic 35.0%
! CAATTTTATTGGCATGCCAT+TGG - chr5_4:48658679-48658698 Msa0855370:intron 35.0%
AACTACAATCATCACACCAA+TGG + chr5_4:48658698-48658717 None:intergenic 35.0%
ACTTGATATGGACAAACACT+TGG - chr5_4:48658730-48658749 Msa0855370:intron 35.0%
ATCGGATAGTATGGAATACT+CGG + chr5_4:48658816-48658835 None:intergenic 35.0%
TATTCCATACTATCCGATGT+GGG - chr5_4:48658818-48658837 Msa0855370:intron 35.0%
! AAGCATGTTGATAAGGACTT+GGG + chr5_4:48658863-48658882 None:intergenic 35.0%
!! TTTTAAGAATGCTCGAGCAA+GGG + chr5_4:48659030-48659049 None:intergenic 35.0%
!! ATTTTAAGAATGCTCGAGCA+AGG + chr5_4:48659031-48659050 None:intergenic 35.0%
CAGAATACTTACAGTATTGC+AGG + chr5_4:48659056-48659075 None:intergenic 35.0%
!! GTGTGTTACCATTTTGATAG+AGG - chr5_4:48659134-48659153 Msa0855370:intron 35.0%
TAATGAAACAAGCGTGTGTA+TGG + chr5_4:48659182-48659201 None:intergenic 35.0%
ACACGGCAGTTAAAAGAAAA+TGG + chr5_4:48659207-48659226 None:intergenic 35.0%
! TGCGTGACGAATTTTTATGA+TGG + chr5_4:48659586-48659605 None:intergenic 35.0%
TAAGTCATGCAATGGCATAA+GGG + chr5_4:48659650-48659669 None:intergenic 35.0%
AATTGATACAGCCATCAAAG+TGG - chr5_4:48659819-48659838 Msa0855370:CDS 35.0%
ATTGATACAGCCATCAAAGT+GGG - chr5_4:48659820-48659839 Msa0855370:CDS 35.0%
AACACTGGATCACTAAACAA+TGG + chr5_4:48659932-48659951 None:intergenic 35.0%
ATTGTTTAGTGATCCAGTGT+TGG - chr5_4:48659931-48659950 Msa0855370:CDS 35.0%
! ATACAAAATCTTGCTGTCCA+CGG + chr5_4:48660108-48660127 None:intergenic 35.0%
AGTCTAGCACTCAATATACA+AGG + chr5_4:48660200-48660219 None:intergenic 35.0%
GCAAAATAAGCAGTATACAC+TGG + chr5_4:48660225-48660244 None:intergenic 35.0%
! GAGAACAATGCATCTTTTTC+TGG + chr5_4:48660281-48660300 None:intergenic 35.0%
GATACATGTGTGTCATGTTG+TGG - chr5_4:48649201-48649220 Msa0855370:three_prime_UTR 40.0%
TACATGTGTGTCATGTTGTG+GGG - chr5_4:48649203-48649222 Msa0855370:three_prime_UTR 40.0%
! CATTCATTTTGCTGCTACAG+CGG + chr5_4:48649279-48649298 None:intergenic 40.0%
!! GCGGCAATCATTTTTCTTCA+GGG + chr5_4:48649339-48649358 None:intergenic 40.0%
!! AGCGGCAATCATTTTTCTTC+AGG + chr5_4:48649340-48649359 None:intergenic 40.0%
TTCTGTTACCGTGACTGTAA+CGG + chr5_4:48649473-48649492 None:intergenic 40.0%
! GCTTCGTTTTCAACTGATGA+TGG - chr5_4:48649609-48649628 Msa0855370:three_prime_UTR 40.0%
ATCGGATGAGTACTTGCTTA+GGG - chr5_4:48650039-48650058 Msa0855370:intron 40.0%
TACATAACCTTCTGCTTCAG+AGG - chr5_4:48650433-48650452 Msa0855370:intron 40.0%
! GAAGAGCTATTTCCTAACCT+AGG - chr5_4:48650896-48650915 Msa0855370:intron 40.0%
CTCATCTATATGCCTAGGTT+AGG + chr5_4:48650911-48650930 None:intergenic 40.0%
CTAACCTAGGCATATAGATG+AGG - chr5_4:48650909-48650928 Msa0855370:CDS 40.0%
CTAACCTCATCTATATGCCT+AGG + chr5_4:48650916-48650935 None:intergenic 40.0%
GGCATATAGATGAGGTTAGT+TGG - chr5_4:48650917-48650936 Msa0855370:CDS 40.0%
ACTCACCTTGTGATGGTAAT+TGG - chr5_4:48651011-48651030 Msa0855370:intron 40.0%
TGATGGTAATTGGAATGACG+TGG - chr5_4:48651021-48651040 Msa0855370:intron 40.0%
GTAATTGGAATGACGTGGTT+CGG - chr5_4:48651026-48651045 Msa0855370:intron 40.0%
! ATTTTATGAGCTAGGCCCTA+TGG - chr5_4:48651284-48651303 Msa0855370:CDS 40.0%
!! ACAATAAATAAGAGGGCGTC+TGG + chr5_4:48651899-48651918 None:intergenic 40.0%
GTCCCTTTCTTATTCAAGCT+TGG - chr5_4:48652046-48652065 Msa0855370:intron 40.0%
! TGATTGGTTGAATACTGCCA+CGG - chr5_4:48652072-48652091 Msa0855370:intron 40.0%
TGCTTCGAATCCTACTATGA+TGG - chr5_4:48652111-48652130 Msa0855370:intron 40.0%
!! GCAAAAAGTGCCATCATAGT+AGG + chr5_4:48652124-48652143 None:intergenic 40.0%
TATCCAATCAACACTGCCAT+GGG + chr5_4:48652151-48652170 None:intergenic 40.0%
ATATCCAATCAACACTGCCA+TGG + chr5_4:48652152-48652171 None:intergenic 40.0%
!! ATGGCAGTGTTGATTGGATA+TGG - chr5_4:48652151-48652170 Msa0855370:intron 40.0%
!! TGGCAGTGTTGATTGGATAT+GGG - chr5_4:48652152-48652171 Msa0855370:intron 40.0%
! TCATGAGTTGGGTTTCAGAT+AGG + chr5_4:48652254-48652273 None:intergenic 40.0%
ATGGAGGAGAATCACAACTA+GGG + chr5_4:48652350-48652369 None:intergenic 40.0%
AATGGAGGAGAATCACAACT+AGG + chr5_4:48652351-48652370 None:intergenic 40.0%
GGAATGCCAATATCTAATGG+AGG + chr5_4:48652366-48652385 None:intergenic 40.0%
! TGTTTCTTTGAGAAGAGCCT+TGG - chr5_4:48652408-48652427 Msa0855370:intron 40.0%
!!! GCGGAATGCTTTGTTTTCTA+AGG - chr5_4:48652491-48652510 Msa0855370:intron 40.0%
TGGCTTATGCCATGAAGAAA+TGG - chr5_4:48652797-48652816 Msa0855370:intron 40.0%
GCAAAGAAATCTCTCTTCTC+TGG + chr5_4:48652943-48652962 None:intergenic 40.0%
AGGCATACCTCTAATATGGT+AGG + chr5_4:48653152-48653171 None:intergenic 40.0%
ACTGAGGCATACCTCTAATA+TGG + chr5_4:48653156-48653175 None:intergenic 40.0%
GGATCACGGAGAATATTTAG+CGG - chr5_4:48653230-48653249 Msa0855370:intron 40.0%
GATCACGGAGAATATTTAGC+GGG - chr5_4:48653231-48653250 Msa0855370:intron 40.0%
! GGTATACTGGCCTACAAATA+TGG - chr5_4:48653369-48653388 Msa0855370:intron 40.0%
!! AATATGGAGCACCTTTTGCA+TGG - chr5_4:48653385-48653404 Msa0855370:intron 40.0%
AGGGAAGTAATCCATGCAAA+AGG + chr5_4:48653399-48653418 None:intergenic 40.0%
CAATATATGCAGCAACTGAC+AGG + chr5_4:48653419-48653438 None:intergenic 40.0%
CTGTCAGTTGCTGCATATAT+TGG - chr5_4:48653417-48653436 Msa0855370:intron 40.0%
! GGTCTTGTCAGATACATTAC+TGG - chr5_4:48653525-48653544 Msa0855370:intron 40.0%
! TATGTTCTCTGCCTTTTCAG+TGG - chr5_4:48653662-48653681 Msa0855370:intron 40.0%
TTCAGTGGAGGACTAAATTC+AGG - chr5_4:48653677-48653696 Msa0855370:intron 40.0%
! CTGATAATGACGCTAGTACT+AGG - chr5_4:48653716-48653735 Msa0855370:intron 40.0%
! AATCTTGGCAGTGTCGTTAT+TGG - chr5_4:48653993-48654012 Msa0855370:intron 40.0%
TCATACATCAACTCAGTGTG+GGG + chr5_4:48654035-48654054 None:intergenic 40.0%
GTCATACATCAACTCAGTGT+GGG + chr5_4:48654036-48654055 None:intergenic 40.0%
TACTGCTCTTTCAACAGCAA+TGG - chr5_4:48654186-48654205 Msa0855370:intron 40.0%
!!! GCAATGGTTTTGTGTTCTCA+TGG - chr5_4:48654202-48654221 Msa0855370:intron 40.0%
TGTTCTCATGGGATCATGAA+TGG - chr5_4:48654214-48654233 Msa0855370:intron 40.0%
ATGAATGGCACAATGACTGT+TGG - chr5_4:48654229-48654248 Msa0855370:intron 40.0%
!! CACAATGACTGTTGGTGATT+TGG - chr5_4:48654237-48654256 Msa0855370:intron 40.0%
ATTGAGGATCACTTATCCTC+CGG - chr5_4:48654351-48654370 Msa0855370:intron 40.0%
CTAACTCAATATGCAGGTGA+TGG - chr5_4:48654498-48654517 Msa0855370:intron 40.0%
TCTCTTCCACTCTATTTCCT+TGG - chr5_4:48654544-48654563 Msa0855370:intron 40.0%
! ACATGGCTTTCATGTCGATT+AGG + chr5_4:48654597-48654616 None:intergenic 40.0%
AGCCATGTTTCAGTTACTTG+AGG - chr5_4:48654609-48654628 Msa0855370:intron 40.0%
AATTGGGTGGAACTACCTAA+CGG + chr5_4:48654775-48654794 None:intergenic 40.0%
TCGAGTAGCAAATAATTGGG+TGG + chr5_4:48654788-48654807 None:intergenic 40.0%
! TTAGTTTGGATTAGAGGGCT+AGG - chr5_4:48654838-48654857 Msa0855370:intron 40.0%
CCCATCATAGGAATTCTTCA+TGG - chr5_4:48655018-48655037 Msa0855370:intron 40.0%
AAGTCAAGAATGGAGTTGAC+TGG - chr5_4:48655051-48655070 Msa0855370:intron 40.0%
AATGGAGTTGACTGGATAGT+TGG - chr5_4:48655059-48655078 Msa0855370:intron 40.0%
TTGGCCGAAAACTATGTAGT+TGG - chr5_4:48655078-48655097 Msa0855370:intron 40.0%
!! ATCAAGGATCGAGCCATTTT+TGG - chr5_4:48655106-48655125 Msa0855370:intron 40.0%
! CTCTTTTGAATCTTCAGCCA+AGG + chr5_4:48655145-48655164 None:intergenic 40.0%
TGGCAAAAGCAGTTCTTACA+AGG + chr5_4:48655276-48655295 None:intergenic 40.0%
CAACTCTACTCCTCATTTGT+AGG - chr5_4:48655319-48655338 Msa0855370:CDS 40.0%
! AGGATTGCCAAAGCCTTATA+AGG - chr5_4:48655545-48655564 Msa0855370:intron 40.0%
! CATGCTTTAGATGTCATCCT+AGG + chr5_4:48655626-48655645 None:intergenic 40.0%
! CTAGGATGACATCTAAAGCA+TGG - chr5_4:48655624-48655643 Msa0855370:CDS 40.0%
TCTCACTCAACCAATTTCCT+AGG + chr5_4:48655697-48655716 None:intergenic 40.0%
CTACTTTCTAATGAGCTTCC+GGG - chr5_4:48655948-48655967 Msa0855370:intron 40.0%
!! TATCTCCATGAAAGTACTCC+CGG + chr5_4:48655969-48655988 None:intergenic 40.0%
AAAGACAGCCTAGGTAGAAA+AGG - chr5_4:48656083-48656102 Msa0855370:CDS 40.0%
! GCATGTTTCCTTTTCTACCT+AGG + chr5_4:48656094-48656113 None:intergenic 40.0%
TTTGGATCCCATGACATTTG+GGG - chr5_4:48656118-48656137 Msa0855370:CDS 40.0%
TAGGAAACCCCAAATGTCAT+GGG + chr5_4:48656128-48656147 None:intergenic 40.0%
GCAATATCTCAAAGTGATGC+AGG + chr5_4:48656331-48656350 None:intergenic 40.0%
GCCATTCCTAATATTGTGAC+AGG - chr5_4:48656353-48656372 Msa0855370:intron 40.0%
!! GCAAAGCCTCTAAGGTTTAA+TGG - chr5_4:48656405-48656424 Msa0855370:CDS 40.0%
!! AAGCCTCTAAGGTTTAATGG+GGG - chr5_4:48656408-48656427 Msa0855370:CDS 40.0%
GAAGTTGTCTCATAGTTCGT+TGG + chr5_4:48656660-48656679 None:intergenic 40.0%
AGTTGCGAAGTAAGAAAACG+AGG + chr5_4:48656974-48656993 None:intergenic 40.0%
! TCGTTTTCTTACTTCGCAAC+TGG - chr5_4:48656973-48656992 Msa0855370:intron 40.0%
! ATTGCAACACTTTTACCAGC+TGG + chr5_4:48657273-48657292 None:intergenic 40.0%
!!! AAACTTTTTTCCGCTGCCTA+TGG - chr5_4:48657360-48657379 Msa0855370:CDS 40.0%
! AACTTTGTTTGTGATTGGGG+TGG + chr5_4:48657461-48657480 None:intergenic 40.0%
! CGCAACTTTGTTTGTGATTG+GGG + chr5_4:48657464-48657483 None:intergenic 40.0%
! GCGCAACTTTGTTTGTGATT+GGG + chr5_4:48657465-48657484 None:intergenic 40.0%
! GCAAAAGCATGATACATGGA+TGG + chr5_4:48657637-48657656 None:intergenic 40.0%
TACTGTCCTATTTGGATCGA+TGG - chr5_4:48657948-48657967 Msa0855370:intron 40.0%
AGACTTCCGTAAACTCTCAA+GGG + chr5_4:48658240-48658259 None:intergenic 40.0%
TAGACTTCCGTAAACTCTCA+AGG + chr5_4:48658241-48658260 None:intergenic 40.0%
GAGAGTTTACGGAAGTCTAT+TGG - chr5_4:48658242-48658261 Msa0855370:intron 40.0%
! AACATATTTCTGCCCTTGCT+AGG - chr5_4:48658314-48658333 Msa0855370:intron 40.0%
CAATTTGCAAGACCTAGCAA+GGG + chr5_4:48658329-48658348 None:intergenic 40.0%
ACAATTTGCAAGACCTAGCA+AGG + chr5_4:48658330-48658349 None:intergenic 40.0%
GTACCTACACATAATCACTC+AGG + chr5_4:48658357-48658376 None:intergenic 40.0%
! GAAAACTCGTGATAGTGTCA+TGG + chr5_4:48658574-48658593 None:intergenic 40.0%
GGTGGAGAATTTATGTGGTT+TGG + chr5_4:48658795-48658814 None:intergenic 40.0%
! TACTCGGTGGAGAATTTATG+TGG + chr5_4:48658800-48658819 None:intergenic 40.0%
GTATTCCATACTATCCGATG+TGG - chr5_4:48658817-48658836 Msa0855370:intron 40.0%
! CAAGCATGTTGATAAGGACT+TGG + chr5_4:48658864-48658883 None:intergenic 40.0%
AGTCCTTATCAACATGCTTG+TGG - chr5_4:48658864-48658883 Msa0855370:intron 40.0%
GTCCTTATCAACATGCTTGT+GGG - chr5_4:48658865-48658884 Msa0855370:intron 40.0%
TCCTTATCAACATGCTTGTG+GGG - chr5_4:48658866-48658885 Msa0855370:intron 40.0%
AAGAAAGGAACACAAACCTC+TGG - chr5_4:48658890-48658909 Msa0855370:intron 40.0%
AGAAAGGAACACAAACCTCT+GGG - chr5_4:48658891-48658910 Msa0855370:intron 40.0%
AGTATTACATTAGGGAGGAG+GGG + chr5_4:48658918-48658937 None:intergenic 40.0%
CAGTATTACATTAGGGAGGA+GGG + chr5_4:48658919-48658938 None:intergenic 40.0%
ACAGTATTACATTAGGGAGG+AGG + chr5_4:48658920-48658939 None:intergenic 40.0%
! CTTCCATTTTCATTGCTCAC+AGG - chr5_4:48659324-48659343 Msa0855370:intron 40.0%
TTGGACTCATCTTCACTGTA+AGG - chr5_4:48659553-48659572 Msa0855370:intron 40.0%
GTAAGTCATGCAATGGCATA+AGG + chr5_4:48659651-48659670 None:intergenic 40.0%
AATGGAAAGATGGTTGAGCA+TGG - chr5_4:48659721-48659740 Msa0855370:intron 40.0%
!! TTTGCTAAGAGCACTTCATG+TGG + chr5_4:48659748-48659767 None:intergenic 40.0%
AGGAAGATATGCACAGCTTT+GGG - chr5_4:48659771-48659790 Msa0855370:CDS 40.0%
TCTTTATGCTCCCACTTTGA+TGG + chr5_4:48659833-48659852 None:intergenic 40.0%
TTCCTTGCTCTTCAAGAAAG+AGG - chr5_4:48659867-48659886 Msa0855370:CDS 40.0%
TTCCTCTTTCTTGAAGAGCA+AGG + chr5_4:48659872-48659891 None:intergenic 40.0%
AAATGATTGCCGCTGCTTCA+AGG - chr5_4:48649346-48649365 Msa0855370:three_prime_UTR 45.0%
AGGAAGCTGTTAAAAGCGAC+CGG + chr5_4:48649410-48649429 None:intergenic 45.0%
CACTCAATTCCCACCAGAAT+CGG - chr5_4:48649444-48649463 Msa0855370:three_prime_UTR 45.0%
! TAACGGTAACCGATTCTGGT+GGG + chr5_4:48649456-48649475 None:intergenic 45.0%
! ACTGTAACGGTAACCGATTC+TGG + chr5_4:48649460-48649479 None:intergenic 45.0%
ATCGGTTACCGTTACAGTCA+CGG - chr5_4:48649462-48649481 Msa0855370:three_prime_UTR 45.0%
TTGGACATGGTTTGAGCTGA+CGG + chr5_4:48649509-48649528 None:intergenic 45.0%
ACCATCACTAAATCACCTCC+AGG - chr5_4:48649660-48649679 Msa0855370:three_prime_UTR 45.0%
ACCTGGAGGTGATTTAGTGA+TGG + chr5_4:48649664-48649683 None:intergenic 45.0%
ATCACTAAATCACCTCCAGG+TGG - chr5_4:48649663-48649682 Msa0855370:three_prime_UTR 45.0%
GATCGGATGAGTACTTGCTT+AGG - chr5_4:48650038-48650057 Msa0855370:intron 45.0%
AATCATACGGAACAAGCGGT+GGG + chr5_4:48650354-48650373 None:intergenic 45.0%
GGTGAATCATACGGAACAAG+CGG + chr5_4:48650358-48650377 None:intergenic 45.0%
AACAGGGGAGGTGAATCATA+CGG + chr5_4:48650367-48650386 None:intergenic 45.0%
TGAGACCACTCAAAGCATGT+GGG - chr5_4:48650391-48650410 Msa0855370:intron 45.0%
!! CTATACTCCTCTGAAGCAGA+AGG + chr5_4:48650443-48650462 None:intergenic 45.0%
GAAAGCAATCACATCGAGCT+TGG - chr5_4:48650499-48650518 Msa0855370:CDS 45.0%
CAATCACATCGAGCTTGGTT+CGG - chr5_4:48650504-48650523 Msa0855370:CDS 45.0%
ATCTTCACCAAACCTCTACG+TGG - chr5_4:48651467-48651486 Msa0855370:intron 45.0%
TGCTGCAAAGTCACTTGTGA+TGG - chr5_4:48651983-48652002 Msa0855370:intron 45.0%
! GATTGGTTGAATACTGCCAC+GGG - chr5_4:48652073-48652092 Msa0855370:intron 45.0%
ATCCAATCAACACTGCCATG+GGG + chr5_4:48652150-48652169 None:intergenic 45.0%
! TCTGGAGCTTCTGCTTTCAA+TGG - chr5_4:48652184-48652203 Msa0855370:intron 45.0%
AACTGATTGTGGCAGAACTG+CGG - chr5_4:48652472-48652491 Msa0855370:intron 45.0%
CGAACAATTGATCGTGGTAG+CGG - chr5_4:48653083-48653102 Msa0855370:CDS 45.0%
! TATTAGCCAACTGCATTGGC+AGG - chr5_4:48653608-48653627 Msa0855370:intron 45.0%
! ATTAGCCAACTGCATTGGCA+GGG - chr5_4:48653609-48653628 Msa0855370:intron 45.0%
! ATTTTCCCTGCCAATGCAGT+TGG + chr5_4:48653617-48653636 None:intergenic 45.0%
! AACTGCATTGGCAGGGAAAA+TGG - chr5_4:48653616-48653635 Msa0855370:intron 45.0%
ATCAACTCAGTGTGGGGATT+TGG + chr5_4:48654029-48654048 None:intergenic 45.0%
GGTCATACATCAACTCAGTG+TGG + chr5_4:48654037-48654056 None:intergenic 45.0%
CTTCCACTCTATTTCCTTGG+TGG - chr5_4:48654547-48654566 Msa0855370:intron 45.0%
ACACCACCAAGGAAATAGAG+TGG + chr5_4:48654553-48654572 None:intergenic 45.0%
TTGCACGATAAACACCACCA+AGG + chr5_4:48654564-48654583 None:intergenic 45.0%
ACACACACAAGTGCATACTC+AGG + chr5_4:48654714-48654733 None:intergenic 45.0%
TGCACTTGTGTGTGTGAACA+TGG - chr5_4:48654719-48654738 Msa0855370:intron 45.0%
TCATAGGAGGAAGGGATTAG+AGG - chr5_4:48654874-48654893 Msa0855370:intron 45.0%
CATAGGAGGAAGGGATTAGA+GGG - chr5_4:48654875-48654894 Msa0855370:intron 45.0%
AGTATCTGAGCTCCCATCAT+AGG - chr5_4:48655006-48655025 Msa0855370:intron 45.0%
TTGGCTGTGATTGACTACCT+TGG - chr5_4:48655125-48655144 Msa0855370:intron 45.0%
TGCCATGTCTCTAGTCAATG+TGG - chr5_4:48655291-48655310 Msa0855370:CDS 45.0%
GCCATGTCTCTAGTCAATGT+GGG - chr5_4:48655292-48655311 Msa0855370:CDS 45.0%
! TCCCACATTGACTAGAGACA+TGG + chr5_4:48655296-48655315 None:intergenic 45.0%
CAAATGTGGCCCTACAAATG+AGG + chr5_4:48655332-48655351 None:intergenic 45.0%
CTCATTTGTAGGGCCACATT+TGG - chr5_4:48655330-48655349 Msa0855370:CDS 45.0%
ATTTGTCCCTGCTCCAAATG+TGG + chr5_4:48655346-48655365 None:intergenic 45.0%
! TTTGGAGCAGGGACAAATGT+CGG - chr5_4:48655348-48655367 Msa0855370:CDS 45.0%
CAACACATTGTCTCTCACCT+AGG - chr5_4:48655394-48655413 Msa0855370:CDS 45.0%
CATTGTCTCTCACCTAGGAT+TGG - chr5_4:48655399-48655418 Msa0855370:CDS 45.0%
CACTCTAAACGTCCAATCCT+AGG + chr5_4:48655414-48655433 None:intergenic 45.0%
! AAGCATGGACAGAAGCATGA+TGG - chr5_4:48655639-48655658 Msa0855370:CDS 45.0%
TGCCGCAAAACCTAGGAAAT+TGG - chr5_4:48655684-48655703 Msa0855370:intron 45.0%
CTAGGAAACCCCAAATGTCA+TGG + chr5_4:48656129-48656148 None:intergenic 45.0%
! CATGACATTTGGGGTTTCCT+AGG - chr5_4:48656127-48656146 Msa0855370:CDS 45.0%
! TTGATAACTGATTCCGGCCT+AGG + chr5_4:48656147-48656166 None:intergenic 45.0%
AGGCCGGAATCAGTTATCAA+AGG - chr5_4:48656147-48656166 Msa0855370:CDS 45.0%
!! AGCCTCTAAGGTTTAATGGG+GGG - chr5_4:48656409-48656428 Msa0855370:CDS 45.0%
TTCCCCCCATTAAACCTTAG+AGG + chr5_4:48656414-48656433 None:intergenic 45.0%
ATATCACTAGTTGTGCCAGC+TGG - chr5_4:48657255-48657274 Msa0855370:intron 45.0%
GTTGCAATTGTTGGGACTAG+TGG - chr5_4:48657285-48657304 Msa0855370:intron 45.0%
! ATTGTTGGGACTAGTGGAAG+TGG - chr5_4:48657291-48657310 Msa0855370:intron 45.0%
!!! TTTTTTCCGCTGCCTATGGT+CGG - chr5_4:48657364-48657383 Msa0855370:CDS 45.0%
AAAATTCCGACCATAGGCAG+CGG + chr5_4:48657373-48657392 None:intergenic 45.0%
TGTGATTGGGGTGGCTAAAA+GGG + chr5_4:48657452-48657471 None:intergenic 45.0%
TTGTGATTGGGGTGGCTAAA+AGG + chr5_4:48657453-48657472 None:intergenic 45.0%
! GGCGCAACTTTGTTTGTGAT+TGG + chr5_4:48657466-48657485 None:intergenic 45.0%
CCATTGTGACTGCTAAGACA+CGG - chr5_4:48657577-48657596 Msa0855370:intron 45.0%
!! GACACGGACTAGATATCTGA+TGG - chr5_4:48657593-48657612 Msa0855370:intron 45.0%
!! TGTCATGGATTGCTGCTTTC+CGG + chr5_4:48658559-48658578 None:intergenic 45.0%
GGATAGTATGGAATACTCGG+TGG + chr5_4:48658813-48658832 None:intergenic 45.0%
TGATAAGGACTTGGGTGTCA+AGG + chr5_4:48658855-48658874 None:intergenic 45.0%
TCCCCACAAGCATGTTGATA+AGG + chr5_4:48658870-48658889 None:intergenic 45.0%
ACATGCTTGTGGGGAAAGAA+AGG - chr5_4:48658875-48658894 Msa0855370:intron 45.0%
GAGCCTGTGAGCAATGAAAA+TGG + chr5_4:48659330-48659349 None:intergenic 45.0%
! GAAGTGCTCTTAGCAAATGC+AGG - chr5_4:48659751-48659770 Msa0855370:CDS 45.0%
CAGGAAGATATGCACAGCTT+TGG - chr5_4:48659770-48659789 Msa0855370:CDS 45.0%
GGAAGATATGCACAGCTTTG+GGG - chr5_4:48659772-48659791 Msa0855370:CDS 45.0%
AGAGATCTTGCAACCAACAC+TGG + chr5_4:48659947-48659966 None:intergenic 45.0%
!!! ACATTATAATATTTTATTTT+AGG - chr5_4:48650087-48650106 Msa0855370:intron 5.0%
ATGTGTGTCATGTTGTGGGG+TGG - chr5_4:48649206-48649225 Msa0855370:three_prime_UTR 50.0%
TGTGTGTCATGTTGTGGGGT+GGG - chr5_4:48649207-48649226 Msa0855370:three_prime_UTR 50.0%
CGATTCTGGTGGGAATTGAG+TGG + chr5_4:48649446-48649465 None:intergenic 50.0%
! GTAACGGTAACCGATTCTGG+TGG + chr5_4:48649457-48649476 None:intergenic 50.0%
ACTAAATCACCTCCAGGTGG+TGG - chr5_4:48649666-48649685 Msa0855370:three_prime_UTR 50.0%
TCAGCAATTTGACCACCACC+TGG + chr5_4:48649681-48649700 None:intergenic 50.0%
GAATCATACGGAACAAGCGG+TGG + chr5_4:48650355-48650374 None:intergenic 50.0%
TGAGTGGTCTCAGCAGAACA+GGG + chr5_4:48650383-48650402 None:intergenic 50.0%
TTGAGTGGTCTCAGCAGAAC+AGG + chr5_4:48650384-48650403 None:intergenic 50.0%
CTGAGACCACTCAAAGCATG+TGG - chr5_4:48650390-48650409 Msa0855370:intron 50.0%
! TAGGACCCACATGCTTTGAG+TGG + chr5_4:48650399-48650418 None:intergenic 50.0%
CTCAAAGCATGTGGGTCCTA+CGG - chr5_4:48650399-48650418 Msa0855370:intron 50.0%
ATTACCTGAGGTCCACGTAG+AGG + chr5_4:48651482-48651501 None:intergenic 50.0%
AACAACACTAGCATTGCCCG+TGG + chr5_4:48652092-48652111 None:intergenic 50.0%
TCCAATCAACACTGCCATGG+GGG + chr5_4:48652149-48652168 None:intergenic 50.0%
GGATATGGGATTGCACGTTC+TGG - chr5_4:48652166-48652185 Msa0855370:intron 50.0%
ACGAGCTCATGAGCTATCTG+AGG + chr5_4:48652315-48652334 None:intergenic 50.0%
TCAGATAGCTCATGAGCTCG+TGG - chr5_4:48652314-48652333 Msa0855370:intron 50.0%
GAGGAGAATCACAACTAGGG+TGG + chr5_4:48652347-48652366 None:intergenic 50.0%
! GTTCTCTGCCTTTTCAGTGG+AGG - chr5_4:48653665-48653684 Msa0855370:intron 50.0%
! AGGGAGTGGTCTCGTCATTT+TGG - chr5_4:48654894-48654913 Msa0855370:intron 50.0%
GGGACAAATGTCGGTGGAAA+TGG - chr5_4:48655357-48655376 Msa0855370:CDS 50.0%
GATGTCATCCTAGGCGTGAA+GGG + chr5_4:48655617-48655636 None:intergenic 50.0%
AGATGTCATCCTAGGCGTGA+AGG + chr5_4:48655618-48655637 None:intergenic 50.0%
! CATGGACAGAAGCATGATGG+AGG - chr5_4:48655642-48655661 Msa0855370:intron 50.0%
!! AATGAGGTGCCGCAAAACCT+AGG - chr5_4:48655677-48655696 Msa0855370:intron 50.0%
!! AGCTTCCGGGAGTACTTTCA+TGG - chr5_4:48655961-48655980 Msa0855370:intron 50.0%
! ACATTTGGGGTTTCCTAGGC+CGG - chr5_4:48656131-48656150 Msa0855370:CDS 50.0%
CCGTGTCTTAGCAGTCACAA+TGG + chr5_4:48657580-48657599 None:intergenic 50.0%
AATACTAGAGTCCAACGCCG+TGG - chr5_4:48658064-48658083 Msa0855370:intron 50.0%
CATGTATCAAACCACGGCGT+TGG + chr5_4:48658078-48658097 None:intergenic 50.0%
CCTCTTCTGTTGCTGAAAGC+CGG + chr5_4:48658417-48658436 None:intergenic 50.0%
GCTTTCAGCAACAGAAGAGG+AGG - chr5_4:48658417-48658436 Msa0855370:intron 50.0%
TACAGGTTTATGAAGCCGCC+CGG - chr5_4:48658537-48658556 Msa0855370:intron 50.0%
!! GTCATGGATTGCTGCTTTCC+GGG + chr5_4:48658558-48658577 None:intergenic 50.0%
ACGTCCCACATCGGATAGTA+TGG + chr5_4:48658825-48658844 None:intergenic 50.0%
TACTATCCGATGTGGGACGT+TGG - chr5_4:48658825-48658844 Msa0855370:intron 50.0%
CACAACCTACGAGCAAGACA+CGG + chr5_4:48659224-48659243 None:intergenic 50.0%
CTCATCACACTGCATTGCAG+TGG + chr5_4:48659354-48659373 None:intergenic 50.0%
CACTGCAATGCAGTGTGATG+AGG - chr5_4:48659352-48659371 Msa0855370:intron 50.0%
GAAGTTGAGTCGTCTTTCCG+TGG - chr5_4:48660088-48660107 Msa0855370:CDS 50.0%
AACGGCGTACCTTGAAGCAG+CGG + chr5_4:48649358-48649377 None:intergenic 55.0%
ACAGCTTCCTGCATCACCAC+AGG - chr5_4:48649420-48649439 Msa0855370:three_prime_UTR 55.0%
GCAATTTGACCACCACCTGG+AGG + chr5_4:48649678-48649697 None:intergenic 55.0%
GAAAACGGGTGGCTAGAGTC+TGG + chr5_4:48650324-48650343 None:intergenic 55.0%
GAGTGGTCTCAGCAGAACAG+GGG + chr5_4:48650382-48650401 None:intergenic 55.0%
CTGAGGTCCACGTAGAGGTT+TGG + chr5_4:48651477-48651496 None:intergenic 55.0%
CAAACCTCTACGTGGACCTC+AGG - chr5_4:48651475-48651494 Msa0855370:intron 55.0%
TGGATGCATGCTCCAGCTTG+CGG - chr5_4:48651518-48651537 Msa0855370:intron 55.0%
!! GGCACTTTTTGCTACCCCCA+TGG - chr5_4:48652132-48652151 Msa0855370:intron 55.0%
!! ACCCCCATGGCAGTGTTGAT+TGG - chr5_4:48652145-48652164 Msa0855370:intron 55.0%
GAGGAAGGGATTAGAGGGAG+TGG - chr5_4:48654880-48654899 Msa0855370:intron 55.0%
! TGTAGGGCCACATTTGGAGC+AGG - chr5_4:48655336-48655355 Msa0855370:CDS 55.0%
! GTAGGGCCACATTTGGAGCA+GGG - chr5_4:48655337-48655356 Msa0855370:CDS 55.0%
CCGGCTTTCAGCAACAGAAG+AGG - chr5_4:48658414-48658433 Msa0855370:intron 55.0%
!! ATGGATTGCTGCTTTCCGGG+CGG + chr5_4:48658555-48658574 None:intergenic 55.0%
TCCACTGTTGTGGGAGAACG+AGG - chr5_4:48658605-48658624 Msa0855370:intron 55.0%
CCACTGTTGTGGGAGAACGA+GGG - chr5_4:48658606-48658625 Msa0855370:intron 55.0%
TGTGGGAGAACGAGGGCTAA+AGG - chr5_4:48658613-48658632 Msa0855370:intron 55.0%
AACTGCCGTGTCTTGCTCGT+AGG - chr5_4:48659216-48659235 Msa0855370:intron 55.0%
TACGCCGTTCCCACCACTTC+CGG - chr5_4:48649369-48649388 Msa0855370:three_prime_UTR 60.0%
! TGAGTGGCCTGTGGTGATGC+AGG + chr5_4:48649430-48649449 None:intergenic 60.0%
GGTGGGAATTGAGTGGCCTG+TGG + chr5_4:48649439-48649458 None:intergenic 60.0%
CATACGGAACAAGCGGTGGG+TGG + chr5_4:48650351-48650370 None:intergenic 60.0%
TGGTCTCAGCAGAACAGGGG+AGG + chr5_4:48650379-48650398 None:intergenic 60.0%
GGATGCATGCTCCAGCTTGC+GGG - chr5_4:48651519-48651538 Msa0855370:intron 60.0%
GATGCATGCTCCAGCTTGCG+GGG - chr5_4:48651520-48651539 Msa0855370:intron 60.0%
ATGCATGCTCCAGCTTGCGG+GGG - chr5_4:48651521-48651540 Msa0855370:intron 60.0%
ATCAACACTCCCCCGCAAGC+TGG + chr5_4:48651533-48651552 None:intergenic 60.0%
GGAGCAGGGACAAATGTCGG+TGG - chr5_4:48655351-48655370 Msa0855370:CDS 60.0%
GTCATCCTAGGCGTGAAGGG+CGG + chr5_4:48655614-48655633 None:intergenic 60.0%
CCCTCGTTCTCCCACAACAG+TGG + chr5_4:48658609-48658628 None:intergenic 60.0%
! GGAGTGCCAACGTCCCACAT+CGG + chr5_4:48658834-48658853 None:intergenic 60.0%
! GCTGCCGGAAGTGGTGGGAA+CGG + chr5_4:48649376-48649395 None:intergenic 65.0%
GTTCCCACCACTTCCGGCAG+CGG - chr5_4:48649375-48649394 Msa0855370:three_prime_UTR 65.0%
TTCCCACCACTTCCGGCAGC+GGG - chr5_4:48649376-48649395 Msa0855370:three_prime_UTR 65.0%
TTCCCGCTGCCGGAAGTGGT+GGG + chr5_4:48649381-48649400 None:intergenic 65.0%
ATTCCCGCTGCCGGAAGTGG+TGG + chr5_4:48649382-48649401 None:intergenic 65.0%
ACGATTCCCGCTGCCGGAAG+TGG + chr5_4:48649385-48649404 None:intergenic 65.0%
GGTGGCTAGAGTCTGGCGTG+TGG + chr5_4:48650317-48650336 None:intergenic 65.0%
! TGGGTGGTGGCGAAAACGGG+TGG + chr5_4:48650335-48650354 None:intergenic 65.0%
! CGGTGGGTGGTGGCGAAAAC+GGG + chr5_4:48650338-48650357 None:intergenic 65.0%
! GCGGTGGGTGGTGGCGAAAA+CGG + chr5_4:48650339-48650358 None:intergenic 65.0%
ACGGAACAAGCGGTGGGTGG+TGG + chr5_4:48650348-48650367 None:intergenic 65.0%
CATAGCCGCCCTTCACGCCT+AGG - chr5_4:48655606-48655625 Msa0855370:CDS 65.0%
TTAGGGAGGAGGGGACCCAG+AGG + chr5_4:48658909-48658928 None:intergenic 65.0%
CCGGACACGATTCCCGCTGC+CGG + chr5_4:48649391-48649410 None:intergenic 70.0%
CCGGCAGCGGGAATCGTGTC+CGG - chr5_4:48649388-48649407 Msa0855370:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 48649134 48660403 48649134 ID=Msa0855370;Name=Msa0855370
chr5_4 mRNA 48649134 48660403 48649134 ID=Msa0855370-mRNA-1;Parent=Msa0855370;Name=Msa0855370-mRNA-1;_AED=0.30;_eAED=0.30;_QI=214|1|1|1|1|1|19|554|723
chr5_4 exon 48649134 48649831 48649134 ID=Msa0855370-mRNA-1:exon:15345;Parent=Msa0855370-mRNA-1
chr5_4 exon 48650164 48650299 48650164 ID=Msa0855370-mRNA-1:exon:15344;Parent=Msa0855370-mRNA-1
chr5_4 exon 48650474 48650538 48650474 ID=Msa0855370-mRNA-1:exon:15343;Parent=Msa0855370-mRNA-1
chr5_4 exon 48650903 48650995 48650903 ID=Msa0855370-mRNA-1:exon:15342;Parent=Msa0855370-mRNA-1
chr5_4 exon 48651099 48651164 48651099 ID=Msa0855370-mRNA-1:exon:15341;Parent=Msa0855370-mRNA-1
chr5_4 exon 48651254 48651334 48651254 ID=Msa0855370-mRNA-1:exon:15340;Parent=Msa0855370-mRNA-1
chr5_4 exon 48651655 48651710 48651655 ID=Msa0855370-mRNA-1:exon:15339;Parent=Msa0855370-mRNA-1
chr5_4 exon 48652225 48652313 48652225 ID=Msa0855370-mRNA-1:exon:15338;Parent=Msa0855370-mRNA-1
chr5_4 exon 48653077 48653162 48653077 ID=Msa0855370-mRNA-1:exon:15337;Parent=Msa0855370-mRNA-1
chr5_4 exon 48654907 48655023 48654907 ID=Msa0855370-mRNA-1:exon:15336;Parent=Msa0855370-mRNA-1
chr5_4 exon 48655279 48655424 48655279 ID=Msa0855370-mRNA-1:exon:15335;Parent=Msa0855370-mRNA-1
chr5_4 exon 48655600 48655660 48655600 ID=Msa0855370-mRNA-1:exon:15334;Parent=Msa0855370-mRNA-1
chr5_4 exon 48655772 48655855 48655772 ID=Msa0855370-mRNA-1:exon:15333;Parent=Msa0855370-mRNA-1
chr5_4 exon 48656076 48656183 48656076 ID=Msa0855370-mRNA-1:exon:15332;Parent=Msa0855370-mRNA-1
chr5_4 exon 48656374 48656476 48656374 ID=Msa0855370-mRNA-1:exon:15331;Parent=Msa0855370-mRNA-1
chr5_4 exon 48656744 48656787 48656744 ID=Msa0855370-mRNA-1:exon:15330;Parent=Msa0855370-mRNA-1
chr5_4 exon 48656989 48657050 48656989 ID=Msa0855370-mRNA-1:exon:15329;Parent=Msa0855370-mRNA-1
chr5_4 exon 48657332 48657506 48657332 ID=Msa0855370-mRNA-1:exon:15328;Parent=Msa0855370-mRNA-1
chr5_4 exon 48659734 48660403 48659734 ID=Msa0855370-mRNA-1:exon:15327;Parent=Msa0855370-mRNA-1
chr5_4 five_prime_UTR 48660190 48660403 48660190 ID=Msa0855370-mRNA-1:five_prime_utr;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48659734 48660189 48659734 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48657332 48657506 48657332 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48656989 48657050 48656989 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48656744 48656787 48656744 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48656374 48656476 48656374 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48656076 48656183 48656076 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48655772 48655855 48655772 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48655600 48655660 48655600 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48655279 48655424 48655279 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48654907 48655023 48654907 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48653077 48653162 48653077 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48652225 48652313 48652225 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48651655 48651710 48651655 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48651254 48651334 48651254 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48651099 48651164 48651099 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48650903 48650995 48650903 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48650474 48650538 48650474 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48650164 48650299 48650164 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 CDS 48649688 48649831 48649688 ID=Msa0855370-mRNA-1:cds;Parent=Msa0855370-mRNA-1
chr5_4 three_prime_UTR 48649134 48649687 48649134 ID=Msa0855370-mRNA-1:three_prime_utr;Parent=Msa0855370-mRNA-1
Gene Sequence

>Msa0855370

ATGATTGCCGCTGCTTCAAGGTACGCCGTTCCCACCACTTCCGGCAGCGGGAATCGTGTCCGGTCGCTTTTAACAGCTTCCTGCATCACCACAGGCCACTCAATTCCCACCAGAATCGGTTACCGTTACAGTCACGGTAACAGAATCAGTTTCAATAACCGTCAGCTCAAACCATGTCCAAGTTCAATTTTCTCTATAAAATGCTTTCTCTCCAATTCATCATCATCATCATCATCATCATCATCATCATCAAATAGTAGAGCTTCGTTTTCAACTGATGATGGAAGTCTCAAGAATCAAAAAACTGCATCTACCATCACTAAATCACCTCCAGGTGGTGGTCAAATTGCTGATATCAAGATCCTTAAATCCCTTATTAGTTACCTTTGGATGAAAGATAATCTTGAATTTCAGCTTCGGGTTGTTGCTGCAACTTTTTTACTTGTTGGAGCTAAGGTTTTGAATGTTCAGGTCCCTTTCTTATTCAAGCTTGGAGTTGATTGGTTGAATACTGCCACGGGCAATGCTAGTGTTGTTGCTTCGAATCCTACTATGATGGCACTTTTTGCTACCCCCATGGCAGTGTTGATTGGATATGGGATTGCACGTTCTGGAGCTTCTGCTTTCAATGAACTGCGGAATGCTTTGTTTTCTAAGGTAGCACTACGGACAATTCGTTTAGTTTCAAGGAAGGTCTTTTCACATTTGCATGACCTTGACCTTCGATATCATCTAAGTCGAGAAACTGGTGCATTAAGTCGAACAATTGATCGTGGTAGCGGAGCAATAAATTTTATTCTCTCCTCTACGTTGTTCAACATAGTACCTACCATATTAGAGATATCTATGGTATCAGGTATACTGGCCTACAAATATGGAGCACCTTTTGCATGGATTACTTCCCTGTCAGTTGCTGCATATATTGGTTTTACACTTTCTATCACACAGTGGAGGACTAAATTCAGGAAAGCCATGAATAAGGCTGATAATGACGCTAGTACTAGGGCTATTGATTCACTTATTAATTATGAGACGGTCAAATATTTCAATAATGAAGTTCACGAAACTGATCATTATGACATGTACCTAAAGAGGTATGAGGATGCTGCCCAGAAAAGCGAACAGAGTCTTGCTTTGTTGAACTTTGGTCAAACCGCTATATTTAGTACTGCTCTTTCAACAGCAATGGTTTTGTGTTCTCATGGGATCATGAATGGCACAATGACTGTTGGTGATTTGGTGATGGTAAATGGGCTTCTCTTCCAACTATCTCTTCCACTCTATTTCCTTGGTGGTGTTTATCGTGCAACTATACAAAGCCTAATCGACATGAAAGCCATGTTTCAGTTACTTGAGGAAAAAGCAGACATTAAGGATAAAGAAAATGCAAAGCCTCTAAGGTTTAATGGGGGGAAAATCCAATTTGAGAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGAATATCACTAGTTGTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCCTTCTCAGAATGCTATTCAGATTTTTTGATCCCCATTCTGGAAGTATAAAGATAGATGATCAAGATATTCGGGATGTATCCCTTGAGAGTTTACGGAAGTCTATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACGATATTTCATAACATTCACTATGGCCGGCTTTCAGCAACAGAAGAGGAGGTTTATGAAGCCGCCCGGAAAGCAGCAATCCATGACACTATCACGAGTTTTCCTGAAAAATACTCCACTGTTGTGGGAGAACGAGGGCTAAAGTTAAGTGGTGGTGAGAAACAACGTGTTTCCCTTGCTCGAGCATTCTTAAAATCACCTGCAATACTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAGTCAGTATCAATGAATCGAACTTCCATTTTCATTGCTCACAGGCTCACCACTGCAATGCAGTGTGATGAGATCATTGTTTTGGAAAATGGAAAGATGGTTGAGCATGGACCACATGAAGTGCTCTTAGCAAATGCAGGAAGATATGCACAGCTTTGGGGACAGCAAAATAACACTATTGATGCAATTGATACAGCCATCAAAGTGGGAGCATAA
Protein sequence

>Msa0855370

MIAAASRYAVPTTSGSGNRVRSLLTASCITTGHSIPTRIGYRYSHGNRISFNNRQLKPCPSSIFSIKCFLSNSSSSSSSSSSSSNSRASFSTDDGSLKNQKTASTITKSPPGGGQIADIKILKSLISYLWMKDNLEFQLRVVAATFLLVGAKVLNVQVPFLFKLGVDWLNTATGNASVVASNPTMMALFATPMAVLIGYGIARSGASAFNELRNALFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRTIDRGSGAINFILSSTLFNIVPTILEISMVSGILAYKYGAPFAWITSLSVAAYIGFTLSITQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNEVHETDHYDMYLKRYEDAAQKSEQSLALLNFGQTAIFSTALSTAMVLCSHGIMNGTMTVGDLVMVNGLLFQLSLPLYFLGGVYRATIQSLIDMKAMFQLLEEKADIKDKENAKPLRFNGGKIQFENVHFSYLTERKILDGISLVVPAGKSVAIVGTSGSGKSTLLRMLFRFFDPHSGSIKIDDQDIRDVSLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEAARKAAIHDTITSFPEKYSTVVGERGLKLSGGEKQRVSLARAFLKSPAILLCDEATSALDSTTEAEILSALKSVSMNRTSIFIAHRLTTAMQCDEIIVLENGKMVEHGPHEVLLANAGRYAQLWGQQNNTIDAIDTAIKVGA*