AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0836200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0836200 MtrunA17_Chr5g0402401 98.006 351 7 0 1 351 1 351 0.0 723
Msa0836200 MtrunA17_Chr5g0422531 58.172 361 136 4 1 351 1 356 1.09e-143 410
Msa0836200 MtrunA17_Chr4g0011731 50.530 283 134 2 73 349 100 382 1.03e-95 290
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0836200 AT4G37040.1 77.778 342 72 2 12 351 11 350 0.0 548
Msa0836200 AT1G13270.1 62.116 293 108 1 62 351 77 369 2.58e-134 387
Msa0836200 AT3G25740.1 53.754 333 144 5 24 349 12 341 3.38e-118 345
Msa0836200 AT2G45240.1 48.561 278 137 2 78 349 106 383 2.04e-89 274
Msa0836200 AT1G13270.2 62.944 197 70 1 62 255 77 273 2.65e-83 254
Msa0836200 AT2G45240.2 46.977 215 109 1 78 287 106 320 5.64e-65 209
Msa0836200 AT3G25740.2 50.575 174 71 3 55 219 42 209 6.66e-44 152

Find 95 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATAAAATAGAAGGTTAT+TGG 0.157642 5_4:+9695068 Msa0836200:three_prime_UTR
TACAGAACCTATGCTGACTA+TGG 0.239457 5_4:+9694548 Msa0836200:intron
TGCTTTATCTAGGCATTCTT+TGG 0.262562 5_4:-9690715 None:intergenic
TTCTGGAAGGCTTGCTGCTC+AGG 0.268389 5_4:+9688386 Msa0836200:CDS
ACAGATGTGCATACACTCTT+TGG 0.287821 5_4:-9689185 None:intergenic
CCATAAAATAGAAGGTTATT+GGG 0.308283 5_4:+9695069 Msa0836200:three_prime_UTR
AGTGATCATGCAGATAAATA+TGG 0.316494 5_4:+9690904 Msa0836200:intron
CCAATCTCTTATTCAATAGA+AGG 0.322925 5_4:+9688193 Msa0836200:CDS
ATTGAATGTATGAGAGCTTC+TGG 0.324353 5_4:+9688369 Msa0836200:CDS
CACCATTATCAATTATCATT+TGG 0.331640 5_4:-9689130 None:intergenic
TTACTGAAGTGCAGAATAAC+TGG 0.332632 5_4:-9690985 None:intergenic
CGACGTGGAGAAACAATTCC+AGG 0.340529 5_4:-9688252 None:intergenic
GGCACATGCTTCTTATAACT+TGG 0.349020 5_4:-9694810 None:intergenic
CAAGAACTTTGATCTGAAAC+TGG 0.356213 5_4:-9694776 None:intergenic
GGAGTGGAATACAAGAAAAT+TGG 0.358013 5_4:+9690756 Msa0836200:CDS
TTTCAGATCAAAGTTCTTGC+TGG 0.375544 5_4:+9694780 Msa0836200:three_prime_UTR
TGGAGGCTTTGTTATGTCCT+TGG 0.383263 5_4:-9688283 None:intergenic
TACCCGTCTCCTCTTGGTTA+TGG 0.385751 5_4:+9689155 Msa0836200:CDS
CACCAAATGATAATTGATAA+TGG 0.386505 5_4:+9689128 Msa0836200:CDS
CCTTCTATTGAATAAGAGAT+TGG 0.388798 5_4:-9688193 None:intergenic
TCAATAGGTAGAGGGAGATT+AGG 0.389670 5_4:+9694936 Msa0836200:three_prime_UTR
ACAACTTACATTTAGATAAA+CGG 0.389802 5_4:-9689359 None:intergenic
CCCCATCAGGTGTTATCAAA+AGG 0.394761 5_4:-9694653 None:intergenic
GGAGGCTTTGTTATGTCCTT+GGG 0.396406 5_4:-9688282 None:intergenic
GTGCAACAGTTTGTTGGCCA+TGG 0.402876 5_4:+9690937 Msa0836200:CDS
ATATCGATATTGCTTTATCT+AGG 0.407550 5_4:-9690725 None:intergenic
CAATTGTCTTTCCACATCAC+TGG 0.411722 5_4:-9694582 None:intergenic
ATACAACACTGTGACTCATT+TGG 0.415013 5_4:-9694831 None:intergenic
ACCTCAAGCGAACGTGAATC+TGG 0.417194 5_4:-9689233 None:intergenic
CATGCAGATAAATATGGATA+TGG 0.420071 5_4:+9690910 Msa0836200:CDS
TTCATTATAGGTTTGTCAAT+AGG 0.420180 5_4:+9694921 Msa0836200:three_prime_UTR
TGCAACAGTTTGTTGGCCAT+GGG 0.424319 5_4:+9690938 Msa0836200:CDS
TATTCTTTCGATCATTAAGA+TGG 0.439056 5_4:+9694967 Msa0836200:three_prime_UTR
ACCTGAAGTACATGATGAAA+AGG 0.457990 5_4:+9688344 Msa0836200:CDS
GAACATCTTACTGAATTGTT+CGG 0.461558 5_4:-9690779 None:intergenic
GTCATAATCTCAGCCCCATC+AGG 0.462099 5_4:-9694666 None:intergenic
CAGTGATGTGGAAAGACAAT+TGG 0.469081 5_4:+9694583 Msa0836200:CDS
TGGACAGTTGTAACAGAAGA+TGG 0.474162 5_4:+9694603 Msa0836200:CDS
CAGTTTGTTGGCCATGGGGT+TGG 0.478716 5_4:+9690943 Msa0836200:CDS
CCTGAAGTACATGATGAAAA+GGG 0.481951 5_4:+9688345 Msa0836200:CDS
CGCAATCCCTGGCGGAACCA+TGG 0.485545 5_4:-9688316 None:intergenic
GCTCAGGTTCTTCAGTATGC+TGG 0.486769 5_4:+9688402 Msa0836200:CDS
GGAATAGTTGAGGAAGTGAT+TGG 0.489316 5_4:-9688031 None:intergenic
CTGTTAAAGTCTTCTTTCAC+CGG 0.490926 5_4:+9687981 Msa0836200:CDS
GGTGCGTACCCGTCTCCTCT+TGG 0.492621 5_4:+9689149 Msa0836200:CDS
TTATGGGTAAAAGATCCAAA+GGG 0.495636 5_4:-9695052 None:intergenic
GTAAAATCCATGGTTCCGCC+AGG 0.509922 5_4:+9688309 Msa0836200:CDS
CCGTCTCCTCTTGGTTATGG+TGG 0.510232 5_4:+9689158 Msa0836200:CDS
TTAAATCAAACCTTCACGAT+TGG 0.513964 5_4:+9691587 Msa0836200:CDS
GGTGTTGTGCAACAGTTTGT+TGG 0.514303 5_4:+9690931 Msa0836200:CDS
CCCATCAGGTGTTATCAAAA+GGG 0.517184 5_4:-9694652 None:intergenic
GCACATGCTTCTTATAACTT+GGG 0.520577 5_4:-9694809 None:intergenic
ATTTCATCAGTCGTTATGCC+TGG 0.524254 5_4:-9689092 None:intergenic
CAACTATTCCGTTACAGACA+AGG 0.529560 5_4:+9688044 Msa0836200:CDS
ATCGATATGTGCACCTGGAG+TGG 0.530627 5_4:+9690740 Msa0836200:CDS
TCAGGTCCACTCGCAATCCC+TGG 0.530751 5_4:-9688327 None:intergenic
AATCGTAAACGCTTGAGACC+TGG 0.531063 5_4:+9688234 Msa0836200:CDS
ATAGGTTTGTCAATAGGTAG+AGG 0.533551 5_4:+9694927 Msa0836200:three_prime_UTR
TTTATGGGTAAAAGATCCAA+AGG 0.533569 5_4:-9695053 None:intergenic
ATAGAAACGCACCTTGACTA+AGG 0.539069 5_4:-9688427 None:intergenic
TAGGTTTGTCAATAGGTAGA+GGG 0.545585 5_4:+9694928 Msa0836200:three_prime_UTR
TATGAATTGTAGGGTTATCA+TGG 0.548429 5_4:+9689776 Msa0836200:intron
AGGTCTCAAGCGTTTACGAT+TGG 0.553505 5_4:-9688232 None:intergenic
GCCTCCATATGTAAAATCCA+TGG 0.558800 5_4:+9688299 Msa0836200:CDS
CCACCATAACCAAGAGGAGA+CGG 0.567121 5_4:-9689158 None:intergenic
ACCAGATTCACGTTCGCTTG+AGG 0.570704 5_4:+9689232 Msa0836200:CDS
GGTTGAAACCTTGTCTGTAA+CGG 0.574103 5_4:-9688052 None:intergenic
CACCATAACCAAGAGGAGAC+GGG 0.579998 5_4:-9689157 None:intergenic
AAGAGAAGAGAACATGGCTA+TGG 0.582836 5_4:+9687938 Msa0836200:exon
TTGCGGGGATGTTGATGATG+AGG 0.585529 5_4:+9689820 Msa0836200:CDS
ACAGAACCTATGCTGACTAT+GGG 0.591367 5_4:+9694549 Msa0836200:intron
AACGTGAATCTGGTATTCCA+TGG 0.591774 5_4:-9689223 None:intergenic
GTTCCGCCAGGGATTGCGAG+TGG 0.597034 5_4:+9688321 Msa0836200:CDS
GTATGCTGGCACCTTAGTCA+AGG 0.603231 5_4:+9688416 Msa0836200:CDS
TGTGTTCAAACTGAGCTGAA+AGG 0.604770 5_4:-9694629 None:intergenic
GTGAATGAATGCATTTGCCA+TGG 0.609251 5_4:+9689206 Msa0836200:CDS
AATGTATGAGAGCTTCTGGA+AGG 0.615258 5_4:+9688373 Msa0836200:CDS
TAAAATCCATGGTTCCGCCA+GGG 0.622525 5_4:+9688310 Msa0836200:CDS
GCAGCGTAAGAATCGATCTC+CGG 0.624358 5_4:-9688000 None:intergenic
GCAATATCGATATGTGCACC+TGG 0.626501 5_4:+9690735 Msa0836200:CDS
ATGCTGCCCATAGTCAGCAT+AGG 0.627596 5_4:-9694555 None:intergenic
TCCACGTCGAAAAGTTCCCA+AGG 0.628745 5_4:+9688266 Msa0836200:CDS
TGTCTGTAACGGAATAGTTG+AGG 0.629364 5_4:-9688041 None:intergenic
CTGAAGTACATGATGAAAAG+GGG 0.629440 5_4:+9688346 Msa0836200:CDS
CAGTGACACGCTGCTGCTCG+CGG 0.632054 5_4:-9687961 None:intergenic
GCAGCATCAATCCAGTGATG+TGG 0.633825 5_4:+9694571 Msa0836200:CDS
ATAAAAGAGATAAGTTACAA+AGG 0.634077 5_4:+9687900 Msa0836200:five_prime_UTR
ATAGTTGAGGAAGTGATTGG+TGG 0.636650 5_4:-9688028 None:intergenic
GCAACAGTTTGTTGGCCATG+GGG 0.649120 5_4:+9690939 Msa0836200:CDS
TATGGGTAAAAGATCCAAAG+GGG 0.673996 5_4:-9695051 None:intergenic
GTTAAGCTAGAAAGTGATCG+AGG 0.686049 5_4:-9688171 None:intergenic
GTAGGAAGAAAGGAAACACA+TGG 0.695496 5_4:+9687876 Msa0836200:five_prime_UTR
GGTCCACTCGCAATCCCTGG+CGG 0.706269 5_4:-9688324 None:intergenic
ATGGGTAAAAGATCCAAAGG+GGG 0.707935 5_4:-9695050 None:intergenic
GGAAAACCACCATAACCAAG+AGG 0.708028 5_4:-9689164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTATATTATTAATAA+AGG + chr5_4:9691749-9691768 Msa0836200:intron 0.0%
!! AATTGTAAAATTATATATCT+TGG + chr5_4:9689274-9689293 Msa0836200:intron 10.0%
!! ATTGTAAAATTATATATCTT+GGG + chr5_4:9689275-9689294 Msa0836200:intron 10.0%
!!! ATTGGTAAAAATATTAATTT+TGG + chr5_4:9690020-9690039 Msa0836200:intron 10.0%
!! CAAATAAAATTCATTATATT+TGG - chr5_4:9690510-9690529 None:intergenic 10.0%
!! ATTATGGAAAAAATTATATT+TGG + chr5_4:9691780-9691799 Msa0836200:intron 10.0%
!!! CATTTTAGAAAAAAATTTGT+AGG + chr5_4:9687858-9687877 Msa0836200:five_prime_UTR 15.0%
!!! TATTTTAATTATGATTGTAG+CGG + chr5_4:9688656-9688675 Msa0836200:intron 15.0%
!! AATTAAATTGTTGAAATGAT+TGG + chr5_4:9689009-9689028 Msa0836200:intron 15.0%
!!! GTAAGTTGTATAATTTTTTT+TGG + chr5_4:9689373-9689392 Msa0836200:intron 15.0%
!!! TATTTTGTTCTTTTAAAACA+TGG + chr5_4:9689593-9689612 Msa0836200:intron 15.0%
!! ATTCCAAAACATATAAAAAT+GGG - chr5_4:9689700-9689719 None:intergenic 15.0%
!! AATTCCAAAACATATAAAAA+TGG - chr5_4:9689701-9689720 None:intergenic 15.0%
!!! ATTTATGGTTTTATATTTTC+TGG + chr5_4:9690416-9690435 Msa0836200:intron 15.0%
!!! ATAAATATAGATTTTCAACA+CGG - chr5_4:9691085-9691104 None:intergenic 15.0%
!!! TTCTTGTTATTTTTATTTTC+AGG + chr5_4:9691539-9691558 Msa0836200:intron 15.0%
!!! TAATTTTTTCCATAATTTCT+TGG - chr5_4:9691776-9691795 None:intergenic 15.0%
!!! TAGTATTTTTTTTAGCATTA+TGG - chr5_4:9691957-9691976 None:intergenic 15.0%
!! TTTCTTAAATACATTGTTTA+AGG - chr5_4:9691985-9692004 None:intergenic 15.0%
!!! AGTAATAATACATGTTTTAA+AGG - chr5_4:9692072-9692091 None:intergenic 15.0%
!! ATGTAAATTATTGAATGAAA+AGG + chr5_4:9692196-9692215 Msa0836200:intron 15.0%
!! ATAACAAAATCTATAAATCT+TGG - chr5_4:9694486-9694505 None:intergenic 15.0%
!!! ATTTAATTTTTTTCTTTACC+TGG + chr5_4:9694518-9694537 Msa0836200:intron 15.0%
!! AAAAAAATTTGTAGGAAGAA+AGG + chr5_4:9687866-9687885 Msa0836200:five_prime_UTR 20.0%
!! ATAAAAGAGATAAGTTACAA+AGG + chr5_4:9687900-9687919 Msa0836200:five_prime_UTR 20.0%
!! TAATTGAAAAGAAGAGAAAA+TGG - chr5_4:9688096-9688115 None:intergenic 20.0%
!!! TTATTTTTACTAGCTTATAG+TGG - chr5_4:9688738-9688757 None:intergenic 20.0%
!!! TTTACAATTTAAGAGTTTTC+TGG - chr5_4:9689263-9689282 None:intergenic 20.0%
!! ACAACTTACATTTAGATAAA+CGG - chr5_4:9689362-9689381 None:intergenic 20.0%
!!! TTGTATAATTTTTTTTGGCA+TGG + chr5_4:9689378-9689397 Msa0836200:intron 20.0%
!!! TTAATTCATCTAGCTTATTT+TGG + chr5_4:9689641-9689660 Msa0836200:intron 20.0%
!! AAATGCAGAATTAAATAACA+GGG - chr5_4:9689930-9689949 None:intergenic 20.0%
!! AAAATGCAGAATTAAATAAC+AGG - chr5_4:9689931-9689950 None:intergenic 20.0%
!!! TTTACCAATATTTTGAAAAC+TGG - chr5_4:9690009-9690028 None:intergenic 20.0%
!!! ATTTTGGATTTTAGATTACT+TGG + chr5_4:9690036-9690055 Msa0836200:intron 20.0%
!!! ATATCTGAAATTCAAAAACT+AGG - chr5_4:9690159-9690178 None:intergenic 20.0%
!! TAGATATTTATTATCTTAGC+AGG + chr5_4:9690266-9690285 Msa0836200:intron 20.0%
!! AGATATTTATTATCTTAGCA+GGG + chr5_4:9690267-9690286 Msa0836200:intron 20.0%
!!! TTTTATATTTTCTGGTCAAT+AGG + chr5_4:9690424-9690443 Msa0836200:intron 20.0%
!! AACAATTAGAATAAGTTGTA+AGG - chr5_4:9690540-9690559 None:intergenic 20.0%
!!! CAACTTATTCTAATTGTTTT+TGG + chr5_4:9690542-9690561 Msa0836200:intron 20.0%
!! TCATATAAACACAAAACAAA+TGG - chr5_4:9690659-9690678 None:intergenic 20.0%
!! AACTATGATCTATATTGTAT+TGG - chr5_4:9691627-9691646 None:intergenic 20.0%
!! AAATTGATAAGTGATAAGAA+AGG + chr5_4:9692238-9692257 Msa0836200:intron 20.0%
!!! AACAGGTTTTTTTTGAATAA+AGG - chr5_4:9692340-9692359 None:intergenic 20.0%
!! AAATATTGAATTGTGACATT+AGG - chr5_4:9693054-9693073 None:intergenic 20.0%
!!! ACACTAAAACTTGTTAAAAA+GGG - chr5_4:9693466-9693485 None:intergenic 20.0%
!!! TCAAAATTTGTAAAGTACTT+TGG + chr5_4:9693918-9693937 Msa0836200:intron 20.0%
!!! GTTTTTCATATATAGAGTTA+AGG + chr5_4:9694361-9694380 Msa0836200:intron 20.0%
!! CTTAAGTCTATATATAATCA+TGG + chr5_4:9694397-9694416 Msa0836200:intron 20.0%
!!! CTACACTTATTTTTCATTAT+AGG + chr5_4:9694909-9694928 Msa0836200:three_prime_UTR 20.0%
! AAAGAAGAGAAAATGGAATT+AGG - chr5_4:9688089-9688108 None:intergenic 25.0%
! ATATTTATAAGCTAGTTGAG+CGG - chr5_4:9688596-9688615 None:intergenic 25.0%
! TATTAACTAACAAACATACG+AGG + chr5_4:9688903-9688922 Msa0836200:intron 25.0%
! CACCAAATGATAATTGATAA+TGG + chr5_4:9689128-9689147 Msa0836200:CDS 25.0%
! CACCATTATCAATTATCATT+TGG - chr5_4:9689133-9689152 None:intergenic 25.0%
!!! TGACATTTTCTTTTATTTGC+AGG + chr5_4:9689309-9689328 Msa0836200:intron 25.0%
!!! ATTTTCTTTTATTTGCAGGA+TGG + chr5_4:9689313-9689332 Msa0836200:intron 25.0%
!!! GCTTATTTTTGCTTTTTGTT+CGG + chr5_4:9689407-9689426 Msa0836200:intron 25.0%
!!! CTTATTTTTGCTTTTTGTTC+GGG + chr5_4:9689408-9689427 Msa0836200:intron 25.0%
!!! TTGCCCATTTTTATATGTTT+TGG + chr5_4:9689694-9689713 Msa0836200:intron 25.0%
! ATAAAACTTGTGCTTTGATT+TGG + chr5_4:9689737-9689756 Msa0836200:intron 25.0%
! AACATATGGATATGAATTGT+AGG + chr5_4:9689766-9689785 Msa0836200:intron 25.0%
! ACATATGGATATGAATTGTA+GGG + chr5_4:9689767-9689786 Msa0836200:intron 25.0%
!!! GTTTAATGCACTTTTTGTAA+TGG + chr5_4:9690070-9690089 Msa0836200:intron 25.0%
! CATTCAAAACTTAATACCAT+AGG - chr5_4:9690357-9690376 None:intergenic 25.0%
!!! ATTAAGTTTTGAATGAGACA+CGG + chr5_4:9690362-9690381 Msa0836200:intron 25.0%
! AAACCATAAATGAATACCAA+GGG - chr5_4:9690407-9690426 None:intergenic 25.0%
! AAAACCATAAATGAATACCA+AGG - chr5_4:9690408-9690427 None:intergenic 25.0%
!!! TTGTTTTGTGTTTATATGAG+TGG + chr5_4:9690660-9690679 Msa0836200:intron 25.0%
!! TGTTTTGTGTTTATATGAGT+GGG + chr5_4:9690661-9690680 Msa0836200:intron 25.0%
! ATATCGATATTGCTTTATCT+AGG - chr5_4:9690728-9690747 None:intergenic 25.0%
! TTCTGAATTTATGTGGAATA+AGG - chr5_4:9690834-9690853 None:intergenic 25.0%
!!! TATTTATTTTACTGCTTACG+AGG + chr5_4:9691098-9691117 Msa0836200:intron 25.0%
! TTCTTTCACTACATAAAAGT+TGG + chr5_4:9691282-9691301 Msa0836200:intron 25.0%
! CTTGTGGAATGTAAAATATA+GGG - chr5_4:9691336-9691355 None:intergenic 25.0%
!! CTATATTTTACATTCCACAA+GGG + chr5_4:9691335-9691354 Msa0836200:intron 25.0%
! TATAACAGTATAAGCTAACA+GGG - chr5_4:9691374-9691393 None:intergenic 25.0%
! AAATGAATATTTCCAGAAAG+AGG - chr5_4:9691415-9691434 None:intergenic 25.0%
!! CGAATTTAAAACTGTTTGTT+TGG + chr5_4:9691441-9691460 Msa0836200:intron 25.0%
! AAAAAAATTACCAATCGTGA+AGG - chr5_4:9691600-9691619 None:intergenic 25.0%
! AATAAAGGACCAAGAAATTA+TGG + chr5_4:9691764-9691783 Msa0836200:intron 25.0%
! ATAAAGGTTGTACAAATAAC+AGG - chr5_4:9692324-9692343 None:intergenic 25.0%
! TATTTGTACAACCTGTTATT+TGG + chr5_4:9692359-9692378 Msa0836200:intron 25.0%
!!! GACACTAAAACTTGTTAAAA+AGG - chr5_4:9693467-9693486 None:intergenic 25.0%
!! GGAAATAATGATTTTACTCT+TGG + chr5_4:9693607-9693626 Msa0836200:intron 25.0%
! AAAGAGCTCAATTTCAATTT+GGG - chr5_4:9693747-9693766 None:intergenic 25.0%
! TAAAGAGCTCAATTTCAATT+TGG - chr5_4:9693748-9693767 None:intergenic 25.0%
! AATAAGAAAGTAGAGATTGA+GGG - chr5_4:9693852-9693871 None:intergenic 25.0%
! AAATAAGAAAGTAGAGATTG+AGG - chr5_4:9693853-9693872 None:intergenic 25.0%
!! TTGTAAAGTACTTTGGTATT+TGG + chr5_4:9693925-9693944 Msa0836200:intron 25.0%
!! TGTAAAGTACTTTGGTATTT+GGG + chr5_4:9693926-9693945 Msa0836200:intron 25.0%
!!! TAAACTTTTTGAAAACCCAT+CGG + chr5_4:9693973-9693992 Msa0836200:intron 25.0%
!!! TTTTCTTTCCCTTATTTGTT+AGG + chr5_4:9694037-9694056 Msa0836200:intron 25.0%
! AACATACACCTAACAAATAA+GGG - chr5_4:9694048-9694067 None:intergenic 25.0%
! AAACATACACCTAACAAATA+AGG - chr5_4:9694049-9694068 None:intergenic 25.0%
! ATTAAGAGTTATTGCATTAG+AGG + chr5_4:9694133-9694152 Msa0836200:intron 25.0%
! AGAAGAAGACAAAAAACTAT+AGG + chr5_4:9694157-9694176 Msa0836200:intron 25.0%
! TATAGACTTAAGAGTCTATT+AGG - chr5_4:9694389-9694408 None:intergenic 25.0%
! ACAAAATCTATAAATCTTGG+AGG - chr5_4:9694483-9694502 None:intergenic 25.0%
! TTCATTATAGGTTTGTCAAT+AGG + chr5_4:9694921-9694940 Msa0836200:three_prime_UTR 25.0%
! TATTCTTTCGATCATTAAGA+TGG + chr5_4:9694967-9694986 Msa0836200:three_prime_UTR 25.0%
!! TCTTTTACCCATAAAATAGA+AGG + chr5_4:9695061-9695080 Msa0836200:three_prime_UTR 25.0%
!! CCAATAACCTTCTATTTTAT+GGG - chr5_4:9695071-9695090 None:intergenic 25.0%
! CCATAAAATAGAAGGTTATT+GGG + chr5_4:9695069-9695088 Msa0836200:three_prime_UTR 25.0%
AAAAAGAAGAGAAGAGAACA+TGG + chr5_4:9687932-9687951 Msa0836200:exon 30.0%
AGAAAATGGAATTAGGAAGA+AGG - chr5_4:9688082-9688101 None:intergenic 30.0%
CTTCATTCATTCTTTGTAAC+AGG + chr5_4:9688123-9688142 Msa0836200:intron 30.0%
CCTTCTATTGAATAAGAGAT+TGG - chr5_4:9688196-9688215 None:intergenic 30.0%
CCAATCTCTTATTCAATAGA+AGG + chr5_4:9688193-9688212 Msa0836200:CDS 30.0%
! TAAACTAGCTTATCTGCTAT+CGG - chr5_4:9688519-9688538 None:intergenic 30.0%
GTGATTGAATTTGTAGTGTT+TGG + chr5_4:9688561-9688580 Msa0836200:intron 30.0%
ATGACTAAAAAAGACCCATT+TGG - chr5_4:9688790-9688809 None:intergenic 30.0%
! ACATACGAGGTTGTTATTAT+TGG + chr5_4:9688916-9688935 Msa0836200:intron 30.0%
! GTTGTTATTATTGGTTAGTG+CGG + chr5_4:9688925-9688944 Msa0836200:intron 30.0%
! TTGTTATTATTGGTTAGTGC+GGG + chr5_4:9688926-9688945 Msa0836200:intron 30.0%
! CAATTTAAGAGTTTTCTGGA+AGG - chr5_4:9689259-9689278 None:intergenic 30.0%
!!! ATAATTTTTTTTGGCATGGC+AGG + chr5_4:9689382-9689401 Msa0836200:intron 30.0%
!!! TAATTTTTTTTGGCATGGCA+GGG + chr5_4:9689383-9689402 Msa0836200:intron 30.0%
!! TGATTTGGTGATTGAACATA+TGG + chr5_4:9689752-9689771 Msa0836200:intron 30.0%
TATGAATTGTAGGGTTATCA+TGG + chr5_4:9689776-9689795 Msa0836200:intron 30.0%
! CAGTCCAGTTTTCAAAATAT+TGG + chr5_4:9690002-9690021 Msa0836200:intron 30.0%
GAATTCATTATGAAAACCTG+AGG + chr5_4:9690092-9690111 Msa0836200:intron 30.0%
TTCAGATATTGTGCTAACAA+AGG + chr5_4:9690170-9690189 Msa0836200:intron 30.0%
! GAATGCTTTTATATTCCCTT+TGG + chr5_4:9690192-9690211 Msa0836200:intron 30.0%
TTTCATATACTCGTTCCAAA+GGG - chr5_4:9690210-9690229 None:intergenic 30.0%
! TTTTCATATACTCGTTCCAA+AGG - chr5_4:9690211-9690230 None:intergenic 30.0%
AGCTACTCTACTGTATTATA+TGG + chr5_4:9690238-9690257 Msa0836200:intron 30.0%
AATACCATAGGATATTCTAC+TGG - chr5_4:9690345-9690364 None:intergenic 30.0%
TATCCCTTGGTATTCATTTA+TGG + chr5_4:9690401-9690420 Msa0836200:intron 30.0%
ATACAATTTCCAGGAATAAG+TGG - chr5_4:9690457-9690476 None:intergenic 30.0%
TTATGGGATATACAATTTCC+AGG - chr5_4:9690466-9690485 None:intergenic 30.0%
TTTGGTAAAACGTTAGTCAA+CGG - chr5_4:9690492-9690511 None:intergenic 30.0%
! GTTTTGTGTTTATATGAGTG+GGG + chr5_4:9690662-9690681 Msa0836200:intron 30.0%
GACCTGTATCAATCAAATAA+GGG - chr5_4:9690694-9690713 None:intergenic 30.0%
TGACCTGTATCAATCAAATA+AGG - chr5_4:9690695-9690714 None:intergenic 30.0%
GAACATCTTACTGAATTGTT+CGG - chr5_4:9690782-9690801 None:intergenic 30.0%
! AGAGGTTTTCTGAATTTATG+TGG - chr5_4:9690841-9690860 None:intergenic 30.0%
ACATAAATTCAGAAAACCTC+TGG + chr5_4:9690840-9690859 Msa0836200:intron 30.0%
AGTGATCATGCAGATAAATA+TGG + chr5_4:9690904-9690923 Msa0836200:intron 30.0%
CATGCAGATAAATATGGATA+TGG + chr5_4:9690910-9690929 Msa0836200:CDS 30.0%
ATGATATTGTGCATAGACTA+AGG + chr5_4:9691224-9691243 Msa0836200:intron 30.0%
TGATATTGTGCATAGACTAA+GGG + chr5_4:9691225-9691244 Msa0836200:intron 30.0%
CCTTGTGGAATGTAAAATAT+AGG - chr5_4:9691337-9691356 None:intergenic 30.0%
! CCTATATTTTACATTCCACA+AGG + chr5_4:9691334-9691353 Msa0836200:intron 30.0%
GTATAACAGTATAAGCTAAC+AGG - chr5_4:9691375-9691394 None:intergenic 30.0%
AGAAAAGCAATCACATCTAA+GGG - chr5_4:9691481-9691500 None:intergenic 30.0%
ACAAACATAACTCTGAATAG+AGG - chr5_4:9691511-9691530 None:intergenic 30.0%
TTAAATCAAACCTTCACGAT+TGG + chr5_4:9691587-9691606 Msa0836200:CDS 30.0%
ATAGATCATAGTTGTCAAAG+CGG + chr5_4:9691634-9691653 Msa0836200:intron 30.0%
TAACAGGTTGTACAAATAAC+AGG - chr5_4:9692357-9692376 None:intergenic 30.0%
AATTTACGTGACCAAATAAC+AGG - chr5_4:9692373-9692392 None:intergenic 30.0%
!! TTGTTTTATTGGTCACGTTT+TGG - chr5_4:9692450-9692469 None:intergenic 30.0%
AAGATGAAAGAGAAAGAGAA+TGG - chr5_4:9692476-9692495 None:intergenic 30.0%
!!! GAGTTTTTTATGGTTGTTTC+CGG - chr5_4:9692591-9692610 None:intergenic 30.0%
ATGATTATTGTTTGCAAAGC+TGG + chr5_4:9692875-9692894 Msa0836200:intron 30.0%
!! TTGTTTTCTGTTGCATTGAT+TGG + chr5_4:9692919-9692938 Msa0836200:intron 30.0%
!!! TGTTTTCTGTTGCATTGATT+GGG + chr5_4:9692920-9692939 Msa0836200:intron 30.0%
AAAGGAAAGAGAATTTCTCA+AGG - chr5_4:9693119-9693138 None:intergenic 30.0%
CAAATTTAAATTTGGCAGTG+TGG - chr5_4:9693238-9693257 None:intergenic 30.0%
CACACTGCCAAATTTAAATT+TGG + chr5_4:9693236-9693255 Msa0836200:intron 30.0%
GCAGCTTCCAAATTTAAATT+TGG - chr5_4:9693246-9693265 None:intergenic 30.0%
AAATAAGTGGCTTACATACA+TGG - chr5_4:9693313-9693332 None:intergenic 30.0%
! TGTATGTAAGCCACTTATTT+TGG + chr5_4:9693313-9693332 Msa0836200:intron 30.0%
CACAATTACTCCAAAATAAG+TGG - chr5_4:9693326-9693345 None:intergenic 30.0%
AACTGCCTTTGAATTTACAT+AGG + chr5_4:9693349-9693368 Msa0836200:intron 30.0%
CTTAGCCTATGTAAATTCAA+AGG - chr5_4:9693357-9693376 None:intergenic 30.0%
! GTAAAAATAATGGAAGTGAG+TGG + chr5_4:9693586-9693605 Msa0836200:intron 30.0%
TGAAAATGATCTGACAATGA+AGG - chr5_4:9693694-9693713 None:intergenic 30.0%
! TCAGATCATTTTCACCTTAA+AGG + chr5_4:9693700-9693719 Msa0836200:intron 30.0%
!! TTTTGAAAACATGACACCAA+GGG - chr5_4:9693904-9693923 None:intergenic 30.0%
!! ATTTTGAAAACATGACACCA+AGG - chr5_4:9693905-9693924 None:intergenic 30.0%
! GTAAAGTACTTTGGTATTTG+GGG + chr5_4:9693927-9693946 Msa0836200:intron 30.0%
TAGTTCATGATGTCTATATG+AGG + chr5_4:9693996-9694015 Msa0836200:intron 30.0%
AGTTCATGATGTCTATATGA+GGG + chr5_4:9693997-9694016 Msa0836200:intron 30.0%
! ACAATGTTGCATTTTATGAG+CGG + chr5_4:9694091-9694110 Msa0836200:intron 30.0%
ACTATAGGCTAAAGATTTAG+AGG + chr5_4:9694172-9694191 Msa0836200:intron 30.0%
CGATCATAAATCATGTCTAT+AGG - chr5_4:9694209-9694228 None:intergenic 30.0%
ACAACAACAAAACCTTATTC+CGG - chr5_4:9694275-9694294 None:intergenic 30.0%
!! ATCACATTTTGAAGAAACTG+TGG + chr5_4:9694330-9694349 Msa0836200:intron 30.0%
CTCACTAAAGCAAGTTTAAA+GGG - chr5_4:9694452-9694471 None:intergenic 30.0%
TCTCACTAAAGCAAGTTTAA+AGG - chr5_4:9694453-9694472 None:intergenic 30.0%
TAGGTTCTGTAAAATTTACC+AGG - chr5_4:9694539-9694558 None:intergenic 30.0%
TTATGGGTAAAAGATCCAAA+GGG - chr5_4:9695055-9695074 None:intergenic 30.0%
TTTATGGGTAAAAGATCCAA+AGG - chr5_4:9695056-9695075 None:intergenic 30.0%
CCCATAAAATAGAAGGTTAT+TGG + chr5_4:9695068-9695087 Msa0836200:three_prime_UTR 30.0%
! CCCAATAACCTTCTATTTTA+TGG - chr5_4:9695072-9695091 None:intergenic 30.0%
CTGTTAAAGTCTTCTTTCAC+CGG + chr5_4:9687981-9688000 Msa0836200:CDS 35.0%
! ACCATGGATTTTACATATGG+AGG - chr5_4:9688303-9688322 None:intergenic 35.0%
! GGAACCATGGATTTTACATA+TGG - chr5_4:9688306-9688325 None:intergenic 35.0%
ACCTGAAGTACATGATGAAA+AGG + chr5_4:9688344-9688363 Msa0836200:CDS 35.0%
CCTGAAGTACATGATGAAAA+GGG + chr5_4:9688345-9688364 Msa0836200:CDS 35.0%
CTGAAGTACATGATGAAAAG+GGG + chr5_4:9688346-9688365 Msa0836200:CDS 35.0%
ATTGAATGTATGAGAGCTTC+TGG + chr5_4:9688369-9688388 Msa0836200:CDS 35.0%
ATTCAATCACCTAGCTTATC+TGG - chr5_4:9688551-9688570 None:intergenic 35.0%
AAATAACCTATAAGCTCGCA+AGG + chr5_4:9688752-9688771 Msa0836200:intron 35.0%
TTACAATCCTAAGACACGTA+GGG - chr5_4:9688873-9688892 None:intergenic 35.0%
ATTACAATCCTAAGACACGT+AGG - chr5_4:9688874-9688893 None:intergenic 35.0%
!!! ATTTTTGCTTTTTGTTCGGG+TGG + chr5_4:9689411-9689430 Msa0836200:intron 35.0%
!!! TTTTTGCTTTTTGTTCGGGT+GGG + chr5_4:9689412-9689431 Msa0836200:intron 35.0%
CAACAATATAGCACAAGAAG+AGG - chr5_4:9689528-9689547 None:intergenic 35.0%
CTCTTCTTGTGCTATATTGT+TGG + chr5_4:9689526-9689545 Msa0836200:intron 35.0%
TTCTTGTGCTATATTGTTGG+AGG + chr5_4:9689529-9689548 Msa0836200:intron 35.0%
TCTTGTGCTATATTGTTGGA+GGG + chr5_4:9689530-9689549 Msa0836200:intron 35.0%
! ACATCGACAACTTTCTTTTG+CGG + chr5_4:9689803-9689822 Msa0836200:CDS 35.0%
TGAGGCTAAAAAACTAGTTC+AGG + chr5_4:9689838-9689857 Msa0836200:CDS 35.0%
! GGATTTTAGATTACTTGGTC+TGG + chr5_4:9690041-9690060 Msa0836200:intron 35.0%
! GATAGCTTTACAGTTTACGT+TGG - chr5_4:9690323-9690342 None:intergenic 35.0%
CTATCCAGTAGAATATCCTA+TGG + chr5_4:9690338-9690357 Msa0836200:intron 35.0%
GTATAAGGAAGAATATCCCT+TGG + chr5_4:9690388-9690407 Msa0836200:intron 35.0%
!! CGTTAGTCAACGGATTTTAT+GGG - chr5_4:9690482-9690501 None:intergenic 35.0%
!! ACGTTAGTCAACGGATTTTA+TGG - chr5_4:9690483-9690502 None:intergenic 35.0%
TGGATGTTGAGATACTATTC+TGG + chr5_4:9690562-9690581 Msa0836200:intron 35.0%
TAAACACAAAACAAATGGCG+AGG - chr5_4:9690654-9690673 None:intergenic 35.0%
CTGTATCAATCAAATAAGGG+AGG - chr5_4:9690691-9690710 None:intergenic 35.0%
! CTCCCTTATTTGATTGATAC+AGG + chr5_4:9690689-9690708 Msa0836200:intron 35.0%
TGCTTTATCTAGGCATTCTT+TGG - chr5_4:9690718-9690737 None:intergenic 35.0%
! ATTTTCTTGTATTCCACTCC+AGG - chr5_4:9690756-9690775 None:intergenic 35.0%
GGAGTGGAATACAAGAAAAT+TGG + chr5_4:9690756-9690775 Msa0836200:CDS 35.0%
GAATAAGGAAATGCAGGAAT+GGG - chr5_4:9690819-9690838 None:intergenic 35.0%
TATGTGGAATAAGGAAATGC+AGG - chr5_4:9690825-9690844 None:intergenic 35.0%
TGATGAATCATATAGTCCAG+AGG - chr5_4:9690859-9690878 None:intergenic 35.0%
TTACTGAAGTGCAGAATAAC+TGG - chr5_4:9690988-9691007 None:intergenic 35.0%
GATATTGTGCATAGACTAAG+GGG + chr5_4:9691226-9691245 Msa0836200:intron 35.0%
GGCTTCTTTGTCAAGTTTAA+TGG - chr5_4:9691315-9691334 None:intergenic 35.0%
TGATATATTCCACCTCTTTC+TGG + chr5_4:9691400-9691419 Msa0836200:intron 35.0%
TGAATATTTCCAGAAAGAGG+TGG - chr5_4:9691412-9691431 None:intergenic 35.0%
CAGAAAAGCAATCACATCTA+AGG - chr5_4:9691482-9691501 None:intergenic 35.0%
!! TTTTCAGGAAACAACGAAGA+TGG + chr5_4:9691554-9691573 Msa0836200:intron 35.0%
!! GAGAATGGTGGTTGTTTTAT+TGG - chr5_4:9692461-9692480 None:intergenic 35.0%
ATGAAAGAGAAAGAGAATGG+TGG - chr5_4:9692473-9692492 None:intergenic 35.0%
!!! GACTGGATCTGAGTTTTTTA+TGG - chr5_4:9692601-9692620 None:intergenic 35.0%
TATATCTCTGTTGTCAAACG+CGG - chr5_4:9692834-9692853 None:intergenic 35.0%
AAGGAAAGCGAAATGATGAA+AGG - chr5_4:9693100-9693119 None:intergenic 35.0%
AATTCTCTTTCCTTTCCACT+TGG + chr5_4:9693124-9693143 Msa0836200:intron 35.0%
GTTGAAATTTCCAAGTGGAA+AGG - chr5_4:9693137-9693156 None:intergenic 35.0%
! TTGGACGTGTGAACTTTTAT+TGG - chr5_4:9693207-9693226 None:intergenic 35.0%
AGTTCACACGTCCAAAAATA+TGG + chr5_4:9693212-9693231 Msa0836200:intron 35.0%
!!! GTCGCTAACTGTTTTAATTG+TGG + chr5_4:9693484-9693503 Msa0836200:intron 35.0%
!!! GCTAACTGTTTTAATTGTGG+AGG + chr5_4:9693487-9693506 Msa0836200:intron 35.0%
!!! ACTGTTTTAATTGTGGAGGA+TGG + chr5_4:9693491-9693510 Msa0836200:intron 35.0%
TATATAGAGGGTAGTGAAAG+TGG + chr5_4:9693517-9693536 Msa0836200:intron 35.0%
CTAGCGCTTGGTAAAAATAA+TGG + chr5_4:9693576-9693595 Msa0836200:intron 35.0%
TCTTGGTATGATTGAACAGT+AGG + chr5_4:9693624-9693643 Msa0836200:intron 35.0%
CTTGGTATGATTGAACAGTA+GGG + chr5_4:9693625-9693644 Msa0836200:intron 35.0%
AATGATCTGACAATGAAGGA+TGG - chr5_4:9693690-9693709 None:intergenic 35.0%
! TATCTGCTACTTCTCCTTTA+AGG - chr5_4:9693717-9693736 None:intergenic 35.0%
GATTGAGGGAATGGAAAATT+TGG - chr5_4:9693838-9693857 None:intergenic 35.0%
TATAAGCTAAAGCAAGTTCC+AGG + chr5_4:9693872-9693891 Msa0836200:intron 35.0%
GCGGAAATATTAGATGAGAT+AGG + chr5_4:9694110-9694129 Msa0836200:intron 35.0%
CATGTCTATAGGCAAACTAT+TGG - chr5_4:9694198-9694217 None:intergenic 35.0%
! CAAGAACTTTGATCTGAAAC+TGG - chr5_4:9694779-9694798 None:intergenic 35.0%
TTTCAGATCAAAGTTCTTGC+TGG + chr5_4:9694780-9694799 Msa0836200:three_prime_UTR 35.0%
GCACATGCTTCTTATAACTT+GGG - chr5_4:9694812-9694831 None:intergenic 35.0%
ATACAACACTGTGACTCATT+TGG - chr5_4:9694834-9694853 None:intergenic 35.0%
ATAGGTTTGTCAATAGGTAG+AGG + chr5_4:9694927-9694946 Msa0836200:three_prime_UTR 35.0%
TAGGTTTGTCAATAGGTAGA+GGG + chr5_4:9694928-9694947 Msa0836200:three_prime_UTR 35.0%
TATGGGTAAAAGATCCAAAG+GGG - chr5_4:9695054-9695073 None:intergenic 35.0%
GTAGGAAGAAAGGAAACACA+TGG + chr5_4:9687876-9687895 Msa0836200:five_prime_UTR 40.0%
AAGAGAAGAGAACATGGCTA+TGG + chr5_4:9687938-9687957 Msa0836200:exon 40.0%
ATAGTTGAGGAAGTGATTGG+TGG - chr5_4:9688031-9688050 None:intergenic 40.0%
GGAATAGTTGAGGAAGTGAT+TGG - chr5_4:9688034-9688053 None:intergenic 40.0%
! TGTCTGTAACGGAATAGTTG+AGG - chr5_4:9688044-9688063 None:intergenic 40.0%
CAACTATTCCGTTACAGACA+AGG + chr5_4:9688044-9688063 Msa0836200:CDS 40.0%
GGTTGAAACCTTGTCTGTAA+CGG - chr5_4:9688055-9688074 None:intergenic 40.0%
TGGAATTAGGAAGAAGGAGA+AGG - chr5_4:9688076-9688095 None:intergenic 40.0%
GTTAAGCTAGAAAGTGATCG+AGG - chr5_4:9688174-9688193 None:intergenic 40.0%
GCCTCCATATGTAAAATCCA+TGG + chr5_4:9688299-9688318 Msa0836200:CDS 40.0%
! CCCTTTTCATCATGTACTTC+AGG - chr5_4:9688348-9688367 None:intergenic 40.0%
AATGTATGAGAGCTTCTGGA+AGG + chr5_4:9688373-9688392 Msa0836200:CDS 40.0%
ATAGAAACGCACCTTGACTA+AGG - chr5_4:9688430-9688449 None:intergenic 40.0%
TATATCATCCTTGAAGCGAG+TGG - chr5_4:9688465-9688484 None:intergenic 40.0%
TAGCTGATACCAGATAAGCT+AGG + chr5_4:9688539-9688558 Msa0836200:intron 40.0%
TTACTTCCTTGCGAGCTTAT+AGG - chr5_4:9688761-9688780 None:intergenic 40.0%
ATAAGCTCGCAAGGAAGTAA+CGG + chr5_4:9688761-9688780 Msa0836200:intron 40.0%
AGGAAGTAACGGTTACCAAA+TGG + chr5_4:9688772-9688791 Msa0836200:intron 40.0%
GGAAGTAACGGTTACCAAAT+GGG + chr5_4:9688773-9688792 Msa0836200:intron 40.0%
TAAGACACGTAGGGTGTATT+TGG - chr5_4:9688864-9688883 None:intergenic 40.0%
AAATACACCCTACGTGTCTT+AGG + chr5_4:9688863-9688882 Msa0836200:intron 40.0%
! TTATTGGTTAGTGCGGGAAA+AGG + chr5_4:9688932-9688951 Msa0836200:intron 40.0%
! TTTAACTTCTGTTGACAGCC+AGG + chr5_4:9689074-9689093 Msa0836200:intron 40.0%
ATTTCATCAGTCGTTATGCC+TGG - chr5_4:9689095-9689114 None:intergenic 40.0%
ACAGATGTGCATACACTCTT+TGG - chr5_4:9689188-9689207 None:intergenic 40.0%
GTGAATGAATGCATTTGCCA+TGG + chr5_4:9689206-9689225 Msa0836200:CDS 40.0%
AACGTGAATCTGGTATTCCA+TGG - chr5_4:9689226-9689245 None:intergenic 40.0%
!!! TTTTGCTTTTTGTTCGGGTG+GGG + chr5_4:9689413-9689432 Msa0836200:intron 40.0%
CTTGTGCTATATTGTTGGAG+GGG + chr5_4:9689531-9689550 Msa0836200:intron 40.0%
! CATCGACAACTTTCTTTTGC+GGG + chr5_4:9689804-9689823 Msa0836200:CDS 40.0%
! ATCGACAACTTTCTTTTGCG+GGG + chr5_4:9689805-9689824 Msa0836200:CDS 40.0%
TCGTTGGCATGAAGATAAAC+TGG - chr5_4:9689866-9689885 None:intergenic 40.0%
GTTTATCTTCATGCCAACGA+TGG + chr5_4:9689866-9689885 Msa0836200:intron 40.0%
TGAACCGTGAACTAGTTCAA+TGG + chr5_4:9689978-9689997 Msa0836200:intron 40.0%
CTGACCATTGAACTAGTTCA+CGG - chr5_4:9689985-9690004 None:intergenic 40.0%
AACCTGAGGAATTACAGAGA+AGG + chr5_4:9690106-9690125 Msa0836200:intron 40.0%
ACCTGAGGAATTACAGAGAA+GGG + chr5_4:9690107-9690126 Msa0836200:intron 40.0%
GGGTCTAAATCCTTAGAGTA+AGG + chr5_4:9690128-9690147 Msa0836200:intron 40.0%
CTAGGTAAGTCCTTACTCTA+AGG - chr5_4:9690141-9690160 None:intergenic 40.0%
AATGAGACACGGAGTGTATA+AGG + chr5_4:9690373-9690392 Msa0836200:intron 40.0%
GGAATGGGAGAACAAATGAT+AGG - chr5_4:9690804-9690823 None:intergenic 40.0%
GGAATAAGGAAATGCAGGAA+TGG - chr5_4:9690820-9690839 None:intergenic 40.0%
TTCCACAAGGGAAAAACCAA+AGG + chr5_4:9691347-9691366 Msa0836200:intron 40.0%
TATAAGCTAACAGGGACCTT+TGG - chr5_4:9691366-9691385 None:intergenic 40.0%
AAAGCAATCACATCTAAGGG+TGG - chr5_4:9691478-9691497 None:intergenic 40.0%
AAACCAATGTTGTACAGCTG+TGG + chr5_4:9692400-9692419 Msa0836200:intron 40.0%
TGGAAATCTGTAGAGAAGGA+AGG - chr5_4:9692505-9692524 None:intergenic 40.0%
AGAAGGAAGAGGAAAGAGAA+TGG - chr5_4:9692530-9692549 None:intergenic 40.0%
GCAAGGTTGAAATTTCCAAG+TGG - chr5_4:9693142-9693161 None:intergenic 40.0%
CCTGTTTATTAAGCTACGCA+AGG - chr5_4:9693159-9693178 None:intergenic 40.0%
CCTTGCGTAGCTTAATAAAC+AGG + chr5_4:9693156-9693175 Msa0836200:intron 40.0%
GATACTACCCACATACCATA+TGG + chr5_4:9693277-9693296 Msa0836200:intron 40.0%
TACCCACATACCATATGGAT+AGG + chr5_4:9693282-9693301 Msa0836200:intron 40.0%
TGCCTATCCATATGGTATGT+GGG - chr5_4:9693287-9693306 None:intergenic 40.0%
ATGCCTATCCATATGGTATG+TGG - chr5_4:9693288-9693307 None:intergenic 40.0%
AATTGCAACAGCTCAGATGT+GGG + chr5_4:9693404-9693423 Msa0836200:intron 40.0%
TGGAGGATGGTACTATATAG+AGG + chr5_4:9693504-9693523 Msa0836200:intron 40.0%
GGAGGATGGTACTATATAGA+GGG + chr5_4:9693505-9693524 Msa0836200:intron 40.0%
GTAGTGAAAGTGGAATGGAA+TGG + chr5_4:9693527-9693546 Msa0836200:intron 40.0%
! TTTTACCAAGCGCTAGATCA+GGG - chr5_4:9693572-9693591 None:intergenic 40.0%
! TTTTTACCAAGCGCTAGATC+AGG - chr5_4:9693573-9693592 None:intergenic 40.0%
AGGAGAAGTAGCAGATATTG+TGG + chr5_4:9693720-9693739 Msa0836200:intron 40.0%
GAAAGTAGAGATTGAGGGAA+TGG - chr5_4:9693847-9693866 None:intergenic 40.0%
AAGTTCCAGGAATATACCCT+TGG + chr5_4:9693885-9693904 Msa0836200:intron 40.0%
AGACATCATGAACTACCGAT+GGG - chr5_4:9693991-9694010 None:intergenic 40.0%
TAGACATCATGAACTACCGA+TGG - chr5_4:9693992-9694011 None:intergenic 40.0%
AACAAAACCTTATTCCGGCA+GGG - chr5_4:9694270-9694289 None:intergenic 40.0%
! TACAGAACCTATGCTGACTA+TGG + chr5_4:9694548-9694567 Msa0836200:intron 40.0%
! ACAGAACCTATGCTGACTAT+GGG + chr5_4:9694549-9694568 Msa0836200:intron 40.0%
CAATTGTCTTTCCACATCAC+TGG - chr5_4:9694585-9694604 None:intergenic 40.0%
CAGTGATGTGGAAAGACAAT+TGG + chr5_4:9694583-9694602 Msa0836200:CDS 40.0%
TGGACAGTTGTAACAGAAGA+TGG + chr5_4:9694603-9694622 Msa0836200:CDS 40.0%
TGTGTTCAAACTGAGCTGAA+AGG - chr5_4:9694632-9694651 None:intergenic 40.0%
!! ACCCTTTTGATAACACCTGA+TGG + chr5_4:9694651-9694670 Msa0836200:CDS 40.0%
! CCCATCAGGTGTTATCAAAA+GGG - chr5_4:9694655-9694674 None:intergenic 40.0%
!! CCCTTTTGATAACACCTGAT+GGG + chr5_4:9694652-9694671 Msa0836200:CDS 40.0%
!! CCTTTTGATAACACCTGATG+GGG + chr5_4:9694653-9694672 Msa0836200:CDS 40.0%
GGCACATGCTTCTTATAACT+TGG - chr5_4:9694813-9694832 None:intergenic 40.0%
TCAATAGGTAGAGGGAGATT+AGG + chr5_4:9694936-9694955 Msa0836200:three_prime_UTR 40.0%
ATGGGTAAAAGATCCAAAGG+GGG - chr5_4:9695053-9695072 None:intergenic 40.0%
AGGTCTCAAGCGTTTACGAT+TGG - chr5_4:9688235-9688254 None:intergenic 45.0%
AATCGTAAACGCTTGAGACC+TGG + chr5_4:9688234-9688253 Msa0836200:CDS 45.0%
!! GGAGGCTTTGTTATGTCCTT+GGG - chr5_4:9688285-9688304 None:intergenic 45.0%
!! TGGAGGCTTTGTTATGTCCT+TGG - chr5_4:9688286-9688305 None:intergenic 45.0%
TAAAATCCATGGTTCCGCCA+GGG + chr5_4:9688310-9688329 Msa0836200:CDS 45.0%
GGAAAACCACCATAACCAAG+AGG - chr5_4:9689167-9689186 None:intergenic 45.0%
ACTACTGTACTACTGAGACG+AGG - chr5_4:9689479-9689498 None:intergenic 45.0%
! GGACATAAGCGTTGTAAGCA+GGG - chr5_4:9689507-9689526 None:intergenic 45.0%
! AGGACATAAGCGTTGTAAGC+AGG - chr5_4:9689508-9689527 None:intergenic 45.0%
TGCTATATTGTTGGAGGGGA+CGG + chr5_4:9689535-9689554 Msa0836200:intron 45.0%
AATAACAGGGCACAGACGTA+TGG - chr5_4:9689917-9689936 None:intergenic 45.0%
CCTGAGGAATTACAGAGAAG+GGG + chr5_4:9690108-9690127 Msa0836200:intron 45.0%
TAGCAGGGCAGTAAGTAACT+AGG + chr5_4:9690282-9690301 Msa0836200:intron 45.0%
! TACGTTGGCACAAGTACTGT+AGG - chr5_4:9690308-9690327 None:intergenic 45.0%
GGAGATGTACCACTTATTCC+TGG + chr5_4:9690445-9690464 Msa0836200:intron 45.0%
GCAATATCGATATGTGCACC+TGG + chr5_4:9690735-9690754 Msa0836200:CDS 45.0%
! GGTGTTGTGCAACAGTTTGT+TGG + chr5_4:9690931-9690950 Msa0836200:CDS 45.0%
!! TGCAACAGTTTGTTGGCCAT+GGG + chr5_4:9690938-9690957 Msa0836200:CDS 45.0%
TGCATAGACTAAGGGGTTGA+AGG + chr5_4:9691233-9691252 Msa0836200:intron 45.0%
ATAGACTAAGGGGTTGAAGG+AGG + chr5_4:9691236-9691255 Msa0836200:intron 45.0%
!!! GACCTTTGGTTTTTCCCTTG+TGG - chr5_4:9691352-9691371 None:intergenic 45.0%
TAGTTGTCAAAGCGGAAACG+CGG + chr5_4:9691642-9691661 Msa0836200:intron 45.0%
TCTGTAGAGAAGGAAGGAGA+AGG - chr5_4:9692499-9692518 None:intergenic 45.0%
GGACTGGAAATCTGTAGAGA+AGG - chr5_4:9692509-9692528 None:intergenic 45.0%
GAAGAGGAAAGAGAATGGAC+TGG - chr5_4:9692525-9692544 None:intergenic 45.0%
! TGGTTGTTTCCGGTTAGATC+CGG - chr5_4:9692581-9692600 None:intergenic 45.0%
!! ACTCAGATCCAGTCGTTTTG+TGG + chr5_4:9692607-9692626 Msa0836200:intron 45.0%
!! AGTCGTTTTGTGGTCAGATC+CGG + chr5_4:9692617-9692636 Msa0836200:intron 45.0%
GGATCTGACCATAAAACGAC+CGG - chr5_4:9692639-9692658 None:intergenic 45.0%
!! GGTCGTTTTATGGTCAGATC+CGG + chr5_4:9692638-9692657 Msa0836200:intron 45.0%
GGATCTGACCATAAAACGAC+CGG - chr5_4:9692639-9692658 None:intergenic 45.0%
!! GGTCGTTTTATGGTCAGATC+CGG + chr5_4:9692638-9692657 Msa0836200:intron 45.0%
TATGGTCAGATCCGGAAAAG+CGG + chr5_4:9692667-9692686 Msa0836200:intron 45.0%
! TGGCAGTGTGGCCATATTTT+TGG - chr5_4:9693226-9693245 None:intergenic 45.0%
CATGGCAATGCCTATCCATA+TGG - chr5_4:9693295-9693314 None:intergenic 45.0%
GAATTGCAACAGCTCAGATG+TGG + chr5_4:9693403-9693422 Msa0836200:intron 45.0%
ATTGCAACAGCTCAGATGTG+GGG + chr5_4:9693405-9693424 Msa0836200:intron 45.0%
AGAGGGTAGTGAAAGTGGAA+TGG + chr5_4:9693522-9693541 Msa0836200:intron 45.0%
! TGACACCAAGGGTATATTCC+TGG - chr5_4:9693893-9693912 None:intergenic 45.0%
ACAAAACCTTATTCCGGCAG+GGG - chr5_4:9694269-9694288 None:intergenic 45.0%
CAACAAAACCTTATTCCGGC+AGG - chr5_4:9694271-9694290 None:intergenic 45.0%
! CCCCATCAGGTGTTATCAAA+AGG - chr5_4:9694656-9694675 None:intergenic 45.0%
!!! TTATCATTTTTAAAAATTAA+AGG - chr5_4:9691145-9691164 None:intergenic 5.0%
!!! TAATATAATTTTTAGTTTTA+GGG - chr5_4:9691742-9691761 None:intergenic 5.0%
!!! ATAATATAATTTTTAGTTTT+AGG - chr5_4:9691743-9691762 None:intergenic 5.0%
!! TTGTTTAAATATATTATTTA+AGG - chr5_4:9691922-9691941 None:intergenic 5.0%
GCAGCGTAAGAATCGATCTC+CGG - chr5_4:9688003-9688022 None:intergenic 50.0%
CGACGTGGAGAAACAATTCC+AGG - chr5_4:9688255-9688274 None:intergenic 50.0%
TCCACGTCGAAAAGTTCCCA+AGG + chr5_4:9688266-9688285 Msa0836200:CDS 50.0%
! TCCTTGGGAACTTTTCGACG+TGG - chr5_4:9688270-9688289 None:intergenic 50.0%
GTAAAATCCATGGTTCCGCC+AGG + chr5_4:9688309-9688328 Msa0836200:CDS 50.0%
GCTCAGGTTCTTCAGTATGC+TGG + chr5_4:9688402-9688421 Msa0836200:CDS 50.0%
GTATGCTGGCACCTTAGTCA+AGG + chr5_4:9688416-9688435 Msa0836200:CDS 50.0%
!! CTTTTTCGCCACTCGCTTCA+AGG + chr5_4:9688454-9688473 Msa0836200:intron 50.0%
TACCCGTCTCCTCTTGGTTA+TGG + chr5_4:9689155-9689174 Msa0836200:CDS 50.0%
CACCATAACCAAGAGGAGAC+GGG - chr5_4:9689160-9689179 None:intergenic 50.0%
CCACCATAACCAAGAGGAGA+CGG - chr5_4:9689161-9689180 None:intergenic 50.0%
ACCAGATTCACGTTCGCTTG+AGG + chr5_4:9689232-9689251 Msa0836200:CDS 50.0%
ACCTCAAGCGAACGTGAATC+TGG - chr5_4:9689236-9689255 None:intergenic 50.0%
TATATTGTTGGAGGGGACGG+AGG + chr5_4:9689538-9689557 Msa0836200:intron 50.0%
!! TTGCGGGGATGTTGATGATG+AGG + chr5_4:9689820-9689839 Msa0836200:CDS 50.0%
TGCCAACGATGGCTGTGATT+TGG + chr5_4:9689877-9689896 Msa0836200:intron 50.0%
CACCAAATCACAGCCATCGT+TGG - chr5_4:9689882-9689901 None:intergenic 50.0%
CCCCTTCTCTGTAATTCCTC+AGG - chr5_4:9690111-9690130 None:intergenic 50.0%
ATCGATATGTGCACCTGGAG+TGG + chr5_4:9690740-9690759 Msa0836200:CDS 50.0%
!! GTGCAACAGTTTGTTGGCCA+TGG + chr5_4:9690937-9690956 Msa0836200:CDS 50.0%
!! GCAACAGTTTGTTGGCCATG+GGG + chr5_4:9690939-9690958 Msa0836200:CDS 50.0%
GAAAAACACGTCCAACCCCA+TGG - chr5_4:9690957-9690976 None:intergenic 50.0%
TAAGGGGTTGAAGGAGGCAA+GGG + chr5_4:9691242-9691261 Msa0836200:intron 50.0%
GCTCCACAGCTGTACAACAT+TGG - chr5_4:9692406-9692425 None:intergenic 50.0%
TACAGCTGTGGAGCAGTAAC+TGG + chr5_4:9692412-9692431 Msa0836200:intron 50.0%
GAAGAGGAAGGAGAAGGAAG+AGG - chr5_4:9692541-9692560 None:intergenic 50.0%
TCTGTAGAGGAGGAAGAGGA+AGG - chr5_4:9692553-9692572 None:intergenic 50.0%
CAGATCTGTAGAGGAGGAAG+AGG - chr5_4:9692557-9692576 None:intergenic 50.0%
CTCTTCCTCCTCTACAGATC+TGG + chr5_4:9692555-9692574 Msa0836200:intron 50.0%
GGATCTGACCACAAAACGAC+TGG - chr5_4:9692618-9692637 None:intergenic 50.0%
!! GGTCAGATCCGGTCGTTTTA+TGG + chr5_4:9692628-9692647 Msa0836200:intron 50.0%
!! GGTCAGATCCGGTCGTTTTA+TGG + chr5_4:9692628-9692647 Msa0836200:intron 50.0%
ATGGTCAGATCCGGAAAAGC+GGG + chr5_4:9692668-9692687 Msa0836200:intron 50.0%
! TTTGTGGAAAGCGGGTTTCG+CGG - chr5_4:9692738-9692757 None:intergenic 50.0%
AGTCACGCGTTTGTGGAAAG+CGG - chr5_4:9692747-9692766 None:intergenic 50.0%
CTTTCCACAAACGCGTGACT+CGG + chr5_4:9692747-9692766 Msa0836200:intron 50.0%
AACAGCTCAGATGTGGGGAA+GGG + chr5_4:9693410-9693429 Msa0836200:intron 50.0%
! ATATAGCTGATTCCCCCTGC+CGG + chr5_4:9694253-9694272 Msa0836200:intron 50.0%
CAAAACCTTATTCCGGCAGG+GGG - chr5_4:9694268-9694287 None:intergenic 50.0%
ATGCTGCCCATAGTCAGCAT+AGG - chr5_4:9694558-9694577 None:intergenic 50.0%
GCAGCATCAATCCAGTGATG+TGG + chr5_4:9694571-9694590 Msa0836200:CDS 50.0%
GTCATAATCTCAGCCCCATC+AGG - chr5_4:9694669-9694688 None:intergenic 50.0%
ATAGCGTATTGCTCCCCCTT+TGG + chr5_4:9695037-9695056 Msa0836200:three_prime_UTR 50.0%
!! TTCTGGAAGGCTTGCTGCTC+AGG + chr5_4:9688386-9688405 Msa0836200:CDS 55.0%
CCGTCTCCTCTTGGTTATGG+TGG + chr5_4:9689158-9689177 Msa0836200:CDS 55.0%
!! TGCTTTTTGTTCGGGTGGGG+AGG + chr5_4:9689416-9689435 Msa0836200:intron 55.0%
! GCTTTTTGTTCGGGTGGGGA+GGG + chr5_4:9689417-9689436 Msa0836200:intron 55.0%
! CTTTTTGTTCGGGTGGGGAG+GGG + chr5_4:9689418-9689437 Msa0836200:intron 55.0%
! TTTTTGTTCGGGTGGGGAGG+GGG + chr5_4:9689419-9689438 Msa0836200:intron 55.0%
!! CAGTTTGTTGGCCATGGGGT+TGG + chr5_4:9690943-9690962 Msa0836200:CDS 55.0%
CTAAGGGGTTGAAGGAGGCA+AGG + chr5_4:9691241-9691260 Msa0836200:intron 55.0%
GGTTGAAGGAGGCAAGGGTT+TGG + chr5_4:9691247-9691266 Msa0836200:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG + chr5_4:9691673-9691692 Msa0836200:intron 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG - chr5_4:9691682-9691701 None:intergenic 55.0%
! TACCGCGCCGCGTCAATTTT+TGG - chr5_4:9691683-9691702 None:intergenic 55.0%
GAGGAGGAAGAGGAAGGAGA+AGG - chr5_4:9692547-9692566 None:intergenic 55.0%
TCCTCCTCTACAGATCTGGC+CGG + chr5_4:9692559-9692578 Msa0836200:intron 55.0%
AGATCCGGCCAGATCTGTAG+AGG - chr5_4:9692566-9692585 None:intergenic 55.0%
CAGATCTGGCCGGATCTAAC+CGG + chr5_4:9692569-9692588 Msa0836200:intron 55.0%
GTCACGCGTTTGTGGAAAGC+GGG - chr5_4:9692746-9692765 None:intergenic 55.0%
!!! GTGACGCGGCTCCTTGTTTT+TGG + chr5_4:9692777-9692796 Msa0836200:intron 55.0%
CAACAGCTCAGATGTGGGGA+AGG + chr5_4:9693409-9693428 Msa0836200:intron 55.0%
ACAGCTCAGATGTGGGGAAG+GGG + chr5_4:9693411-9693430 Msa0836200:intron 55.0%
TGACTCCCTGATCTAGCGCT+TGG + chr5_4:9693564-9693583 Msa0836200:intron 55.0%
TGATTCCCCCTGCCGGAATA+AGG + chr5_4:9694260-9694279 Msa0836200:intron 55.0%
TCAGGTCCACTCGCAATCCC+TGG - chr5_4:9688330-9688349 None:intergenic 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG - chr5_4:9691678-9691697 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG - chr5_4:9691681-9691700 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG + chr5_4:9691678-9691697 Msa0836200:intron 60.0%
AATTGACGCGGCGCGGTATG+CGG + chr5_4:9691685-9691704 Msa0836200:intron 60.0%
GCGGGGGCTATTACATGACG+CGG + chr5_4:9691715-9691734 Msa0836200:intron 60.0%
TCCGGCCAGATCTGTAGAGG+AGG - chr5_4:9692563-9692582 None:intergenic 60.0%
!! GGTCAAAGCGCCCGCTTTTC+CGG - chr5_4:9692681-9692700 None:intergenic 60.0%
AAGCGGAGCGGGTCAATAGC+GGG - chr5_4:9692702-9692721 None:intergenic 60.0%
GAAGCGGAGCGGGTCAATAG+CGG - chr5_4:9692703-9692722 None:intergenic 60.0%
! TCCACAAACGCGTGACTCGG+TGG + chr5_4:9692750-9692769 Msa0836200:intron 60.0%
! AGATGTGGGGAAGGGGTGCA+TGG + chr5_4:9693418-9693437 Msa0836200:intron 60.0%
! GATGTGGGGAAGGGGTGCAT+GGG + chr5_4:9693419-9693438 Msa0836200:intron 60.0%
CAGTGACACGCTGCTGCTCG+CGG - chr5_4:9687964-9687983 None:intergenic 65.0%
CGCAATCCCTGGCGGAACCA+TGG - chr5_4:9688319-9688338 None:intergenic 65.0%
GTTCCGCCAGGGATTGCGAG+TGG + chr5_4:9688321-9688340 Msa0836200:CDS 65.0%
GGTCCACTCGCAATCCCTGG+CGG - chr5_4:9688327-9688346 None:intergenic 65.0%
GGTGCGTACCCGTCTCCTCT+TGG + chr5_4:9689149-9689168 Msa0836200:CDS 65.0%
!! GTGGGGAGGGGGACTAGTCA+TGG + chr5_4:9689430-9689449 Msa0836200:intron 65.0%
TGTTGGAGGGGACGGAGGCT+AGG + chr5_4:9689543-9689562 Msa0836200:intron 65.0%
ATTGACGCGGCGCGGTATGC+GGG + chr5_4:9691686-9691705 Msa0836200:intron 65.0%
GCGAAATCGCGAAGCGGAGC+GGG - chr5_4:9692713-9692732 None:intergenic 65.0%
CGCGAAATCGCGAAGCGGAG+CGG - chr5_4:9692714-9692733 None:intergenic 65.0%
CGCTCCGCTTCGCGATTTCG+CGG + chr5_4:9692712-9692731 Msa0836200:intron 65.0%
GCCACCGAGTCACGCGTTTG+TGG - chr5_4:9692754-9692773 None:intergenic 65.0%
!! GACTCGGTGGCGTTGTGACG+CGG + chr5_4:9692763-9692782 Msa0836200:intron 65.0%
GCGCGGAGCGGCCAAAAACA+AGG - chr5_4:9692791-9692810 None:intergenic 65.0%
GCGGCCGCGAAATCGCGAAG+CGG - chr5_4:9692719-9692738 None:intergenic 70.0%
AGCGGAAACGCGGCGCGACG+CGG + chr5_4:9691652-9691671 Msa0836200:intron 75.0%
! CGCGGTATGCGGGCGCGACG+CGG + chr5_4:9691696-9691715 Msa0836200:intron 80.0%
! GCGGTATGCGGGCGCGACGC+GGG + chr5_4:9691697-9691716 Msa0836200:intron 80.0%
! CGGTATGCGGGCGCGACGCG+GGG + chr5_4:9691698-9691717 Msa0836200:intron 80.0%
! GGTATGCGGGCGCGACGCGG+GGG + chr5_4:9691699-9691718 Msa0836200:intron 80.0%
! GGCGCTATCGCGGCGCGGAG+CGG - chr5_4:9692803-9692822 None:intergenic 80.0%
! GCTCCGCGCCGCGATAGCGC+CGG + chr5_4:9692802-9692821 Msa0836200:intron 80.0%
! CTCCGCGCCGCGATAGCGCC+GGG + chr5_4:9692803-9692822 Msa0836200:intron 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 9687827 9695136 9687827 ID=Msa0836200;Name=Msa0836200
chr5_4 mRNA 9687827 9695136 9687827 ID=Msa0836200-mRNA-1;Parent=Msa0836200;Name=Msa0836200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=124|1|1|1|1|1|9|438|351
chr5_4 exon 9687827 9688065 9687827 ID=Msa0836200-mRNA-1:exon:4299;Parent=Msa0836200-mRNA-1
chr5_4 exon 9688145 9688437 9688145 ID=Msa0836200-mRNA-1:exon:4300;Parent=Msa0836200-mRNA-1
chr5_4 exon 9689092 9689253 9689092 ID=Msa0836200-mRNA-1:exon:4301;Parent=Msa0836200-mRNA-1
chr5_4 exon 9689331 9689372 9689331 ID=Msa0836200-mRNA-1:exon:4302;Parent=Msa0836200-mRNA-1
chr5_4 exon 9689788 9689859 9689788 ID=Msa0836200-mRNA-1:exon:4303;Parent=Msa0836200-mRNA-1
chr5_4 exon 9690711 9690790 9690711 ID=Msa0836200-mRNA-1:exon:4304;Parent=Msa0836200-mRNA-1
chr5_4 exon 9690906 9691003 9690906 ID=Msa0836200-mRNA-1:exon:4305;Parent=Msa0836200-mRNA-1
chr5_4 exon 9691561 9691608 9691561 ID=Msa0836200-mRNA-1:exon:4306;Parent=Msa0836200-mRNA-1
chr5_4 exon 9694553 9695136 9694553 ID=Msa0836200-mRNA-1:exon:4307;Parent=Msa0836200-mRNA-1
chr5_4 five_prime_UTR 9687827 9687950 9687827 ID=Msa0836200-mRNA-1:five_prime_utr;Parent=Msa0836200-mRNA-1
chr5_4 CDS 9687951 9688065 9687951 ID=Msa0836200-mRNA-1:cds;Parent=Msa0836200-mRNA-1
chr5_4 CDS 9688145 9688437 9688145 ID=Msa0836200-mRNA-1:cds;Parent=Msa0836200-mRNA-1
chr5_4 CDS 9689092 9689253 9689092 ID=Msa0836200-mRNA-1:cds;Parent=Msa0836200-mRNA-1
chr5_4 CDS 9689331 9689372 9689331 ID=Msa0836200-mRNA-1:cds;Parent=Msa0836200-mRNA-1
chr5_4 CDS 9689788 9689859 9689788 ID=Msa0836200-mRNA-1:cds;Parent=Msa0836200-mRNA-1
chr5_4 CDS 9690711 9690790 9690711 ID=Msa0836200-mRNA-1:cds;Parent=Msa0836200-mRNA-1
chr5_4 CDS 9690906 9691003 9690906 ID=Msa0836200-mRNA-1:cds;Parent=Msa0836200-mRNA-1
chr5_4 CDS 9691561 9691608 9691561 ID=Msa0836200-mRNA-1:cds;Parent=Msa0836200-mRNA-1
chr5_4 CDS 9694553 9694698 9694553 ID=Msa0836200-mRNA-1:cds;Parent=Msa0836200-mRNA-1
chr5_4 three_prime_UTR 9694699 9695136 9694699 ID=Msa0836200-mRNA-1:three_prime_utr;Parent=Msa0836200-mRNA-1
Gene Sequence

>Msa0836200

ATGGCTATGGCCGCGAGCAGCAGCGTGTCACTGTTAAAGTCTTCTTTCACCGGAGATCGATTCTTACGCTGCTCACGCCACCAATCACTTCCTCAACTATTCCGTTACAGACAAGGAATGAATCATTTTTCGATGCAGTTACCTCGATCACTTTCTAGCTTAACCAATCTCTTATTCAATAGAAGGAACATCGATGACAATACCAATCGTAAACGCTTGAGACCTGGAATTGTTTCTCCACGTCGAAAAGTTCCCAAGGACATAACAAAGCCTCCATATGTAAAATCCATGGTTCCGCCAGGGATTGCGAGTGGACCTGAAGTACATGATGAAAAGGGGATTGAATGTATGAGAGCTTCTGGAAGGCTTGCTGCTCAGGTTCTTCAGTATGCTGGCACCTTAGTCAAGCCAGGCATAACGACTGATGAAATTGACGAAGCAGTTCACCAAATGATAATTGATAATGGTGCGTACCCGTCTCCTCTTGGTTATGGTGGTTTTCCAAAGAGTGTATGCACATCTGTGAATGAATGCATTTGCCATGGAATACCAGATTCACGTTCGCTTGAGGATGGTGATATAATCAACATTGATGTTACCGTTTATCTAAATGGTTATCATGGTGACACATCGACAACTTTCTTTTGCGGGGATGTTGATGATGAGGCTAAAAAACTAGTTCAGGTCACCAAAGAATGCCTAGATAAAGCAATATCGATATGTGCACCTGGAGTGGAATACAAGAAAATTGGCCGAACAATTCATGATCATGCAGATAAATATGGATATGGTGTTGTGCAACAGTTTGTTGGCCATGGGGTTGGACGTGTTTTTCATGCTGATCCAGTTATTCTGCACTTCAGAAACAACGAAGATGGACGTATGATGTTAAATCAAACCTTCACGATTGAACCTATGCTGACTATGGGCAGCATCAATCCAGTGATGTGGAAAGACAATTGGACAGTTGTAACAGAAGATGGAAGCCTTTCAGCTCAGTTTGAACACACCCTTTTGATAACACCTGATGGGGCTGAGATTATGACTCAATGCTGA

Protein sequence

>Msa0836200

MAMAASSSVSLLKSSFTGDRFLRCSRHQSLPQLFRYRQGMNHFSMQLPRSLSSLTNLLFNRRNIDDNTNRKRLRPGIVSPRRKVPKDITKPPYVKSMVPPGIASGPEVHDEKGIECMRASGRLAAQVLQYAGTLVKPGITTDEIDEAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRSLEDGDIINIDVTVYLNGYHGDTSTTFFCGDVDDEAKKLVQVTKECLDKAISICAPGVEYKKIGRTIHDHADKYGYGVVQQFVGHGVGRVFHADPVILHFRNNEDGRMMLNQTFTIEPMLTMGSINPVMWKDNWTVVTEDGSLSAQFEHTLLITPDGAEIMTQC*