AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0646390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0646390 MtrunA17_Chr4g0034441 98.438 448 7 0 1 448 1 448 0.0 924
Msa0646390 MtrunA17_Chr4g0034461 86.928 306 39 1 1 306 1 305 0.0 556
Msa0646390 MtrunA17_Chr4g0034471 91.176 136 12 0 313 448 1 136 2.40e-87 262
Msa0646390 MtrunA17_Chr1g0197471 77.536 138 31 0 112 249 92 229 1.04e-69 222
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0646390 AT4G34350.1 77.124 459 89 3 5 448 8 465 0.0 744

Find 124 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGACTTTGAAGGAAAA+TGG 0.141165 4_3:-52127454 Msa0646390:CDS
ATTCTTGGTGGTGAATTTAA+TGG 0.163592 4_3:-52126263 Msa0646390:CDS
CATCATAGACCAATCTATTT+AGG 0.217939 4_3:-52124767 Msa0646390:three_prime_UTR
ATTTAAATTTGCCCTTTCTA+AGG 0.245365 4_3:-52126126 Msa0646390:CDS
AACGCGGAATTCCTTCTTAC+TGG 0.255913 4_3:-52125535 Msa0646390:CDS
TTGTATGCTATTCTGTTTCC+TGG 0.263735 4_3:+52125488 None:intergenic
AGATTCTTACGGAAGAGTTT+TGG 0.268289 4_3:+52128468 None:intergenic
CCACAACCCAACTGTTAATA+AGG 0.284593 4_3:-52127287 Msa0646390:intron
GATGTTACACCAATCCTTAA+TGG 0.325134 4_3:+52125303 None:intergenic
TTCTACCAAAGGGTCCATTA+AGG 0.329049 4_3:-52125317 Msa0646390:CDS
GTAGTCATACTGCCTGCTTT+TGG 0.349326 4_3:-52126728 Msa0646390:CDS
CAGGATGAACTTGAAATTAC+AGG 0.351003 4_3:-52124899 Msa0646390:three_prime_UTR
TTCATCAGGAAATTGTTTCC+TGG 0.355179 4_3:+52127336 None:intergenic
TGTTTCTTCCCTTCTCCAAT+AGG 0.358071 4_3:+52126776 None:intergenic
AGGACTATGATGCGTAAATA+TGG 0.365077 4_3:-52125906 Msa0646390:CDS
TATGTTTGCGACTATATTCT+TGG 0.365313 4_3:-52126278 Msa0646390:CDS
TCAAGGTGTTTGATTTGAAA+AGG 0.366046 4_3:-52124984 Msa0646390:CDS
CCTTGTGACCAAAGCCTTTG+CGG 0.366949 4_3:+52128424 None:intergenic
AATTATAACCGCAAAGGCTT+TGG 0.372584 4_3:-52128432 Msa0646390:CDS
AAATGCCTCTCTGGTTGAAC+TGG 0.377526 4_3:+52126238 None:intergenic
TCGAATGATAGTACCATTAC+TGG 0.397402 4_3:+52124689 None:intergenic
TTATTAAATGTATAAATAAC+AGG 0.399628 4_3:-52124918 Msa0646390:three_prime_UTR
TTATGTTAGTTGTTGGTGGC+TGG 0.411202 4_3:-52125598 Msa0646390:CDS
GTTCCTCGGCTATCTCTTGT+AGG 0.412759 4_3:+52125555 None:intergenic
CAAGCTGGTGGAGAAAGATA+TGG 0.419899 4_3:-52125624 Msa0646390:CDS
TTAAGACTTTGAAGGAAAAT+GGG 0.420831 4_3:-52127453 Msa0646390:CDS
GAAGTGCAGAATATTCCTAT+TGG 0.422603 4_3:-52126791 Msa0646390:CDS
CAAGGTGTTTGATTTGAAAA+GGG 0.423274 4_3:-52124983 Msa0646390:CDS
TGGGTTGTGGATAATTTCAT+TGG 0.423611 4_3:+52127300 None:intergenic
CATTCGAATATAATGAAAAC+AGG 0.423645 4_3:-52124673 Msa0646390:three_prime_UTR
CCTTATTAACAGTTGGGTTG+TGG 0.426777 4_3:+52127287 None:intergenic
AATATACCTTATTAACAGTT+GGG 0.443511 4_3:+52127281 None:intergenic
GAATATACCTTATTAACAGT+TGG 0.443926 4_3:+52127280 None:intergenic
GACTATACCTCGATAATTCA+TGG 0.447725 4_3:-52126482 Msa0646390:CDS
CCAATCCTTAATGGACCCTT+TGG 0.452397 4_3:+52125312 None:intergenic
GGAACGTCGATGCGAGTGGC+GGG 0.452613 4_3:+52128558 None:intergenic
GTGATGCTAGCCGAATCCTT+TGG 0.452734 4_3:-52127403 Msa0646390:CDS
GCAAGAGAAAATACCTTGTC+AGG 0.454180 4_3:+52125267 None:intergenic
CACTTCTTGTGAGATTCTTA+CGG 0.455809 4_3:+52128457 None:intergenic
CTCGCGAGTCATGAGTTTGA+GGG 0.458558 4_3:+52128395 None:intergenic
ATTGACAGCGAGCAAAGAAT+TGG 0.462963 4_3:-52125512 Msa0646390:CDS
CAGTTGCTACGGTTTCCTCA+TGG 0.466058 4_3:+52126450 None:intergenic
ATGGATGATCCTAAATAGAT+TGG 0.466225 4_3:+52124758 None:intergenic
TGTCCTGACAGTATCTTCAA+TGG 0.466463 4_3:-52128610 Msa0646390:exon
GATCTTATGTTAGTTGTTGG+TGG 0.473078 4_3:-52125602 Msa0646390:CDS
TTTAAATTTGCCCTTTCTAA+GGG 0.475566 4_3:-52126125 Msa0646390:CDS
ATGGATCTTATGTTAGTTGT+TGG 0.478899 4_3:-52125605 Msa0646390:CDS
TTCAAATAGCTTATGAAGCC+AGG 0.480923 4_3:-52127354 Msa0646390:CDS
CACAATTTGTGATGCTACTC+AGG 0.482457 4_3:-52125847 Msa0646390:intron
CCAACAAAATCCAAAGGATT+CGG 0.483780 4_3:+52127393 None:intergenic
CGGAGAAGAGTTTGCGGCAA+CGG 0.485618 4_3:+52128520 None:intergenic
TTAAGGATTGGTGTAACATC+TGG 0.487090 4_3:-52125300 Msa0646390:CDS
TGACATCATTAAGACTTTGA+AGG 0.488498 4_3:-52127461 Msa0646390:CDS
AACTTGCCCGTGGGTTTCAA+AGG 0.489241 4_3:-52126648 Msa0646390:intron
GAGTTTGCGGCAACGGAAAG+TGG 0.489819 4_3:+52128527 None:intergenic
CAGAATATTCCTATTGGAGA+AGG 0.491958 4_3:-52126785 Msa0646390:CDS
AAAATGGGTTTGAGTATACA+TGG 0.492239 4_3:-52127438 Msa0646390:CDS
AGAAGGAATTCCGCGTTCCT+CGG 0.495852 4_3:+52125541 None:intergenic
TCAACTGCGGCTCCAAAAGC+AGG 0.503912 4_3:+52126716 None:intergenic
GACAGTGACCTGGTAAAACT+TGG 0.507138 4_3:-52126092 Msa0646390:CDS
CTTTCAGCATGGTGAGCTTG+TGG 0.510724 4_3:-52125352 Msa0646390:intron
AAATAGAGAACACGAGTTTG+CGG 0.512910 4_3:-52128687 Msa0646390:five_prime_UTR
AGCAAAAGATGCAGTTGCTA+CGG 0.513891 4_3:+52126439 None:intergenic
AAAGAAAACTTTCTACCAAA+GGG 0.517497 4_3:-52125327 Msa0646390:CDS
AGTTGCTACGGTTTCCTCAT+GGG 0.518159 4_3:+52126451 None:intergenic
AGAAGGGAAGAAACAATTTG+AGG 0.519363 4_3:-52126768 Msa0646390:CDS
TCATCCATGCATTTGTACTC+TGG 0.521867 4_3:-52124743 Msa0646390:three_prime_UTR
GATGCAGCGGCTAGAGGAGA+TGG 0.525080 4_3:-52126813 Msa0646390:intron
CCGCAAAGGCTTTGGTCACA+AGG 0.525512 4_3:-52128424 Msa0646390:CDS
GAAAGAAAACTTTCTACCAA+AGG 0.530120 4_3:-52125328 Msa0646390:CDS
ACAATTTGAGGTTGTCAACA+AGG 0.534141 4_3:-52126756 Msa0646390:CDS
ACTCGCGAGTCATGAGTTTG+AGG 0.543010 4_3:+52128394 None:intergenic
CTGGATCAAAGCCCTTAGAA+AGG 0.544154 4_3:+52126114 None:intergenic
CTGTCAGGACAAAGACAAAC+GGG 0.544738 4_3:+52128622 None:intergenic
ATGTCTCTATTGACCAGTAA+TGG 0.544999 4_3:-52124702 Msa0646390:three_prime_UTR
AGAAAATACCTTGTCAGGTG+TGG 0.545193 4_3:+52125272 None:intergenic
TGGATCAAAGCCCTTAGAAA+GGG 0.549420 4_3:+52126115 None:intergenic
AATCGGAGTCGGCGGAGCAA+CGG 0.550136 4_3:+52128496 None:intergenic
CCAAAGGGTCCATTAAGGAT+TGG 0.551091 4_3:-52125312 Msa0646390:CDS
ACTGTCAGGACAAAGACAAA+CGG 0.556263 4_3:+52128621 None:intergenic
ATTCATTTAATATAACATTG+AGG 0.557891 4_3:+52124842 None:intergenic
AGCGAGCAAAGAATTGGTCC+AGG 0.563565 4_3:-52125506 Msa0646390:CDS
GAGCCATTGAAGATACTGTC+AGG 0.564228 4_3:+52128607 None:intergenic
AACGGACGGAGAAGAGTTTG+CGG 0.566321 4_3:+52128514 None:intergenic
CAACGGAAAGTGGACGGAGA+AGG 0.568434 4_3:+52128537 None:intergenic
ACAAGATGCTATTTACAAGC+TGG 0.568463 4_3:-52125639 Msa0646390:CDS
GGTGGAAGATGCTCTTATCA+AGG 0.571756 4_3:-52125001 Msa0646390:CDS
AAATCAGACAACAATGCTCA+AGG 0.577136 4_3:-52126063 Msa0646390:CDS
ATGATTGATGCAGCGGCTAG+AGG 0.580973 4_3:-52126819 Msa0646390:intron
TCGCTGTCAATCCAGTAAGA+AGG 0.582364 4_3:+52125524 None:intergenic
AAATGGGTTTGAGTATACAT+GGG 0.586456 4_3:-52127437 Msa0646390:CDS
GAACGTCGATGCGAGTGGCG+GGG 0.586973 4_3:+52128559 None:intergenic
GTTTGCGACTATATTCTTGG+TGG 0.588117 4_3:-52126275 Msa0646390:CDS
CGTTGATACAACTTGCCCGT+GGG 0.588283 4_3:-52126657 Msa0646390:CDS
AGGAACGTCGATGCGAGTGG+CGG 0.589279 4_3:+52128557 None:intergenic
ATAGATACCTTTGAAACCCA+CGG 0.589835 4_3:+52126641 None:intergenic
GCATTTGTACTCTGGCTGCA+AGG 0.598950 4_3:-52124735 Msa0646390:three_prime_UTR
CTTTGATCCAGACAGTGACC+TGG 0.605562 4_3:-52126102 Msa0646390:CDS
TGGTGCATCCACACCTGACA+AGG 0.608493 4_3:-52125280 Msa0646390:intron
AGTGAGAATTATAACCGCAA+AGG 0.609945 4_3:-52128438 Msa0646390:CDS
CAAGAGATAGCCGAGGAACG+CGG 0.611703 4_3:-52125551 Msa0646390:CDS
TGCGAGTGGCGGGGAGACGT+AGG 0.612473 4_3:+52128568 None:intergenic
TTGCGGCAACGGAAAGTGGA+CGG 0.613001 4_3:+52128531 None:intergenic
GGAGTCGGCGGAGCAACGGA+CGG 0.613935 4_3:+52128500 None:intergenic
AGATGCTATTTACAAGCTGG+TGG 0.615477 4_3:-52125636 Msa0646390:CDS
TCGTTGATACAACTTGCCCG+TGG 0.618282 4_3:-52126658 Msa0646390:CDS
TGGGTCAAAATCGGAGTCGG+CGG 0.619991 4_3:+52128488 None:intergenic
AATCAGACAACAATGCTCAA+GGG 0.621380 4_3:-52126062 Msa0646390:CDS
CAATTTGAGGTTGTCAACAA+GGG 0.624367 4_3:-52126755 Msa0646390:CDS
TAGATACCTTTGAAACCCAC+GGG 0.624793 4_3:+52126642 None:intergenic
AAGGGAGAGACTGAAGAGAT+CGG 0.626047 4_3:-52126044 Msa0646390:intron
AGAAGGAACGTCGATGCGAG+TGG 0.627790 4_3:+52128554 None:intergenic
AGAATATTCCTATTGGAGAA+GGG 0.631143 4_3:-52126784 Msa0646390:CDS
GCAGCCAGAGTACAAATGCA+TGG 0.635339 4_3:+52124739 None:intergenic
TATGATGCGTAAATATGGCG+TGG 0.636939 4_3:-52125901 Msa0646390:CDS
ATATTTACCATGAATTATCG+AGG 0.639141 4_3:+52126475 None:intergenic
TTATAGGCAGACTAGTGGAG+AGG 0.648372 4_3:-52125926 Msa0646390:intron
TAGATTGGTCTATGATGACA+AGG 0.652639 4_3:+52124773 None:intergenic
CATTACAACTCGTGTAACGT+AGG 0.654962 4_3:-52124954 Msa0646390:exon
TCATGGTAAATATGCCCATG+AGG 0.657612 4_3:-52126465 Msa0646390:CDS
AATGGGTTTGAGTATACATG+GGG 0.674771 4_3:-52127436 Msa0646390:CDS
TGGATCCAGTTCAACCAGAG+AGG 0.678385 4_3:-52126243 Msa0646390:CDS
AGTCAACATCTCGTCAACTG+CGG 0.691748 4_3:+52126703 None:intergenic
ACACCTACAAGAGATAGCCG+AGG 0.737129 4_3:-52125558 Msa0646390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATTTAAATAAACTATAT+GGG + chr4_3:52128232-52128251 None:intergenic 10.0%
!! TGAAATTTAAATAAACTATA+TGG + chr4_3:52128233-52128252 None:intergenic 10.0%
!! TTATTAAATGTATAAATAAC+AGG - chr4_3:52128425-52128444 Msa0646390:CDS 10.0%
!! AAAAAGACGTAAAATAAATA+TGG - chr4_3:52126296-52126315 Msa0646390:intron 15.0%
!! AAAAGACGTAAAATAAATAT+GGG - chr4_3:52126297-52126316 Msa0646390:intron 15.0%
!! TAAAATAAATATGGGTATAT+TGG - chr4_3:52126305-52126324 Msa0646390:intron 15.0%
!! ATACATAATTGTGAAAAATA+TGG - chr4_3:52126932-52126951 Msa0646390:intron 15.0%
!!! CAACTTTTTTATTAGAATAA+TGG + chr4_3:52127661-52127680 None:intergenic 15.0%
!! ATTCATTTAATATAACATTG+AGG + chr4_3:52128504-52128523 None:intergenic 15.0%
!!! CTATATTCTCATAAGTTTTT+CGG - chr4_3:52125630-52125649 Msa0646390:CDS 20.0%
!!! TATACACTTTTTGTAATTTC+AGG - chr4_3:52125859-52125878 Msa0646390:CDS 20.0%
!! AATTTCCTGATGAAAAAATT+TGG - chr4_3:52126016-52126035 Msa0646390:intron 20.0%
!! AATATACCTTATTAACAGTT+GGG + chr4_3:52126065-52126084 None:intergenic 20.0%
!! CAATTAATCATGTAAAATGA+CGG + chr4_3:52126486-52126505 None:intergenic 20.0%
!!! TATGTTGTTGATCATTTTAT+AGG - chr4_3:52127401-52127420 Msa0646390:CDS 20.0%
!!! TGTGAATCTATAAAAACTTT+TGG - chr4_3:52128105-52128124 Msa0646390:intron 20.0%
!! AGCATTAAAAAAACTTAGAT+TGG + chr4_3:52128293-52128312 None:intergenic 20.0%
! ACATAAGATGAGAAATTTGA+TGG - chr4_3:52125302-52125321 Msa0646390:CDS 25.0%
!!! TTTGTTGTTCAATTGATTTG+TGG - chr4_3:52125332-52125351 Msa0646390:CDS 25.0%
! TTGTTGAACTTCTTTAGATA+TGG - chr4_3:52125397-52125416 Msa0646390:intron 25.0%
!! CATCTGCTAACATTTTTATT+GGG + chr4_3:52125610-52125629 None:intergenic 25.0%
!!! CAGTCTTATTCAAATAAAGT+CGG + chr4_3:52125692-52125711 None:intergenic 25.0%
!! ATTAAGACTTTGAAGGAAAA+TGG - chr4_3:52125889-52125908 Msa0646390:CDS 25.0%
!! TTAAGACTTTGAAGGAAAAT+GGG - chr4_3:52125890-52125909 Msa0646390:CDS 25.0%
!!! GTAATCCAAATTTTTTCATC+AGG + chr4_3:52126024-52126043 None:intergenic 25.0%
! GAATATACCTTATTAACAGT+TGG + chr4_3:52126066-52126085 None:intergenic 25.0%
! AAAAATTCAGAGATCAATGA+AGG + chr4_3:52126100-52126119 None:intergenic 25.0%
! AAATATGGGTATATTGGTAT+AGG - chr4_3:52126311-52126330 Msa0646390:intron 25.0%
! TATAGGAATAATTGATGTAG+TGG - chr4_3:52126328-52126347 Msa0646390:intron 25.0%
!! ACAAAGAAATTTTCTCAAGA+AGG - chr4_3:52126380-52126399 Msa0646390:intron 25.0%
!! TCAAGAAGGTCTTATATTTA+GGG - chr4_3:52126394-52126413 Msa0646390:intron 25.0%
!!! TTCTTCGATGAATTGTTTTA+AGG - chr4_3:52126806-52126825 Msa0646390:CDS 25.0%
! ATATTTACCATGAATTATCG+AGG + chr4_3:52126871-52126890 None:intergenic 25.0%
!! ACAACAATATCTTCAAGTTA+AGG + chr4_3:52127010-52127029 None:intergenic 25.0%
! CAAATAATCACAACATTGAA+GGG + chr4_3:52127180-52127199 None:intergenic 25.0%
! TCAAATAATCACAACATTGA+AGG + chr4_3:52127181-52127200 None:intergenic 25.0%
! ATTTAAATTTGCCCTTTCTA+AGG - chr4_3:52127217-52127236 Msa0646390:intron 25.0%
! TTTAAATTTGCCCTTTCTAA+GGG - chr4_3:52127218-52127237 Msa0646390:intron 25.0%
! CTTGATGTTATTGCTTATTT+GGG - chr4_3:52127538-52127557 Msa0646390:intron 25.0%
! AAAGAAAACTTTCTACCAAA+GGG - chr4_3:52128016-52128035 Msa0646390:intron 25.0%
!! TTTTTATAGATTCACAAGCA+AGG + chr4_3:52128101-52128120 None:intergenic 25.0%
! TTACAAAAAACTAACAAGAG+TGG + chr4_3:52128135-52128154 None:intergenic 25.0%
!! TGTGTAATGAAATATGCTTT+TGG - chr4_3:52128177-52128196 Msa0646390:intron 25.0%
! TATTATCAGCAAAAACTGAA+TGG + chr4_3:52128269-52128288 None:intergenic 25.0%
!!! TAATGCTTATTTTGCATCAT+TGG - chr4_3:52128306-52128325 Msa0646390:intron 25.0%
! CATTCGAATATAATGAAAAC+AGG - chr4_3:52128670-52128689 Msa0646390:five_prime_UTR 25.0%
!!! TTAGCGAAATTGTTTTGACT+TGG + chr4_3:52125016-52125035 None:intergenic 30.0%
TCGCTAATTGAGTTTCTTAT+CGG - chr4_3:52125029-52125048 Msa0646390:intron 30.0%
GAAAGTAACACACTTTATGA+TGG + chr4_3:52125110-52125129 None:intergenic 30.0%
!! AAAGTGTGTTACTTTCTAGT+TGG - chr4_3:52125114-52125133 Msa0646390:intron 30.0%
!! AAGTGTGTTACTTTCTAGTT+GGG - chr4_3:52125115-52125134 Msa0646390:intron 30.0%
! TCAGAGACATTTGAGATTAA+AGG - chr4_3:52125145-52125164 Msa0646390:intron 30.0%
!! AGAAAGTACTTCATAGAGTT+TGG - chr4_3:52125278-52125297 Msa0646390:intron 30.0%
! GCTTATTTGAGTTTATCTAG+TGG - chr4_3:52125466-52125485 Msa0646390:intron 30.0%
! TGACTTATTTGAGTTTATCG+TGG + chr4_3:52125566-52125585 None:intergenic 30.0%
AAATAAGTCAATCCAAACAG+AGG - chr4_3:52125576-52125595 Msa0646390:CDS 30.0%
! GCATCTGCTAACATTTTTAT+TGG + chr4_3:52125611-52125630 None:intergenic 30.0%
TATTGAACTAAGGTCTTCTT+TGG + chr4_3:52125803-52125822 None:intergenic 30.0%
TGACATCATTAAGACTTTGA+AGG - chr4_3:52125882-52125901 Msa0646390:CDS 30.0%
! AAAATGGGTTTGAGTATACA+TGG - chr4_3:52125905-52125924 Msa0646390:CDS 30.0%
! AAATGGGTTTGAGTATACAT+GGG - chr4_3:52125906-52125925 Msa0646390:CDS 30.0%
TTTCCATGATTTGACTAAGA+GGG + chr4_3:52126159-52126178 None:intergenic 30.0%
ATTTCCATGATTTGACTAAG+AGG + chr4_3:52126160-52126179 None:intergenic 30.0%
ATAAGTTTATCCATCAAGAG+AGG - chr4_3:52126229-52126248 Msa0646390:intron 30.0%
TAAGTTTATCCATCAAGAGA+GGG - chr4_3:52126230-52126249 Msa0646390:intron 30.0%
! TGATGTAGTGGAAAATTCAA+AGG - chr4_3:52126340-52126359 Msa0646390:intron 30.0%
! GATGTAGTGGAAAATTCAAA+GGG - chr4_3:52126341-52126360 Msa0646390:intron 30.0%
! ATGTAGTGGAAAATTCAAAG+GGG - chr4_3:52126342-52126361 Msa0646390:intron 30.0%
TCAAAGGGGATCTTATAAAA+AGG - chr4_3:52126356-52126375 Msa0646390:intron 30.0%
CAAAGGGGATCTTATAAAAA+GGG - chr4_3:52126357-52126376 Msa0646390:intron 30.0%
! CTCAAGAAGGTCTTATATTT+AGG - chr4_3:52126393-52126412 Msa0646390:intron 30.0%
AGAATATTCCTATTGGAGAA+GGG - chr4_3:52126559-52126578 Msa0646390:intron 30.0%
!!! CGATGAATTGTTTTAAGGTA+TGG - chr4_3:52126811-52126830 Msa0646390:intron 30.0%
AATTGTGAAAAATATGGCAG+AGG - chr4_3:52126938-52126957 Msa0646390:intron 30.0%
GCATAATTGAAAATTCATCC+AGG - chr4_3:52127037-52127056 Msa0646390:intron 30.0%
TATGTTTGCGACTATATTCT+TGG - chr4_3:52127065-52127084 Msa0646390:intron 30.0%
!! ATTCTTGGTGGTGAATTTAA+TGG - chr4_3:52127080-52127099 Msa0646390:intron 30.0%
!!! ATTTTTTTGCTGTGGAGTTA+AGG - chr4_3:52127326-52127345 Msa0646390:CDS 30.0%
!!! TTTTTTTGCTGTGGAGTTAA+GGG - chr4_3:52127327-52127346 Msa0646390:CDS 30.0%
CCAAATAAGCAATAACATCA+AGG + chr4_3:52127540-52127559 None:intergenic 30.0%
CCTTGATGTTATTGCTTATT+TGG - chr4_3:52127537-52127556 Msa0646390:intron 30.0%
! AATATGTTTTTCTGTCGCAA+TGG - chr4_3:52127623-52127642 Msa0646390:intron 30.0%
TAGAATAATGGCATACAGAA+TGG + chr4_3:52127649-52127668 None:intergenic 30.0%
GTTGAATTGAATTTCCTTTC+AGG - chr4_3:52127677-52127696 Msa0646390:intron 30.0%
ATGGATCTTATGTTAGTTGT+TGG - chr4_3:52127738-52127757 Msa0646390:intron 30.0%
ATGTTTACTGTATCAGATCT+TGG + chr4_3:52127916-52127935 None:intergenic 30.0%
! TATCTTTTCATCTTTCAGCA+TGG - chr4_3:52127980-52127999 Msa0646390:intron 30.0%
GAAAGAAAACTTTCTACCAA+AGG - chr4_3:52128015-52128034 Msa0646390:intron 30.0%
AAAAAACTAACAAGAGTGGA+AGG + chr4_3:52128131-52128150 None:intergenic 30.0%
!! TCAAGGTGTTTGATTTGAAA+AGG - chr4_3:52128359-52128378 Msa0646390:intron 30.0%
!! CAAGGTGTTTGATTTGAAAA+GGG - chr4_3:52128360-52128379 Msa0646390:intron 30.0%
!!! CTTCTAAATGTTGCTTTTTG+TGG - chr4_3:52128525-52128544 Msa0646390:CDS 30.0%
CATCATAGACCAATCTATTT+AGG - chr4_3:52128576-52128595 Msa0646390:CDS 30.0%
ATGGATGATCCTAAATAGAT+TGG + chr4_3:52128588-52128607 None:intergenic 30.0%
!!! GAAGAGTTTTGGGTCAAAAT+CGG + chr4_3:52124867-52124886 None:intergenic 35.0%
! GATTCTTACGGAAGAGTTTT+GGG + chr4_3:52124877-52124896 None:intergenic 35.0%
! AGATTCTTACGGAAGAGTTT+TGG + chr4_3:52124878-52124897 None:intergenic 35.0%
CACTTCTTGTGAGATTCTTA+CGG + chr4_3:52124889-52124908 None:intergenic 35.0%
AGTGAGAATTATAACCGCAA+AGG - chr4_3:52124905-52124924 Msa0646390:three_prime_UTR 35.0%
AATTATAACCGCAAAGGCTT+TGG - chr4_3:52124911-52124930 Msa0646390:three_prime_UTR 35.0%
!! GTTCAATTGATTTGTGGAGA+TGG - chr4_3:52125338-52125357 Msa0646390:CDS 35.0%
! TGAGATTTTATGCCTCTGTT+TGG - chr4_3:52125439-52125458 Msa0646390:intron 35.0%
! TTTTATGCCTCTGTTTGGAT+TGG - chr4_3:52125444-52125463 Msa0646390:intron 35.0%
AAATAAGCCAATCCAAACAG+AGG + chr4_3:52125454-52125473 None:intergenic 35.0%
! AGACTGTTTGAGACAGTTAA+CGG - chr4_3:52125503-52125522 Msa0646390:CDS 35.0%
GTGGCATAAACAACGTATTA+CGG + chr4_3:52125547-52125566 None:intergenic 35.0%
! AATGGGTTTGAGTATACATG+GGG - chr4_3:52125907-52125926 Msa0646390:CDS 35.0%
CCAACAAAATCCAAAGGATT+CGG + chr4_3:52125953-52125972 None:intergenic 35.0%
! CGAATCCTTTGGATTTTGTT+GGG - chr4_3:52125951-52125970 Msa0646390:intron 35.0%
! GAATCCTTTGGATTTTGTTG+GGG - chr4_3:52125952-52125971 Msa0646390:intron 35.0%
! AATCCTTTGGATTTTGTTGG+GGG - chr4_3:52125953-52125972 Msa0646390:intron 35.0%
TTCAAATAGCTTATGAAGCC+AGG - chr4_3:52125989-52126008 Msa0646390:intron 35.0%
TTCATCAGGAAATTGTTTCC+TGG + chr4_3:52126010-52126029 None:intergenic 35.0%
TGGGTTGTGGATAATTTCAT+TGG + chr4_3:52126046-52126065 None:intergenic 35.0%
TATACTCCGTCCCTAAATAT+AGG - chr4_3:52126132-52126151 Msa0646390:intron 35.0%
CTAAGAGGGTCCTATATTTA+GGG + chr4_3:52126145-52126164 None:intergenic 35.0%
ACTAAGAGGGTCCTATATTT+AGG + chr4_3:52126146-52126165 None:intergenic 35.0%
AAATTAACTCCCTCTCTTGA+TGG + chr4_3:52126242-52126261 None:intergenic 35.0%
GAAGTGCAGAATATTCCTAT+TGG - chr4_3:52126552-52126571 Msa0646390:intron 35.0%
CAGAATATTCCTATTGGAGA+AGG - chr4_3:52126558-52126577 Msa0646390:intron 35.0%
AGAAGGGAAGAAACAATTTG+AGG - chr4_3:52126575-52126594 Msa0646390:intron 35.0%
! ACAATTTGAGGTTGTCAACA+AGG - chr4_3:52126587-52126606 Msa0646390:intron 35.0%
! CAATTTGAGGTTGTCAACAA+GGG - chr4_3:52126588-52126607 Msa0646390:intron 35.0%
!! ATAGATACCTTTGAAACCCA+CGG + chr4_3:52126705-52126724 None:intergenic 35.0%
! GTTGTCGAAAAGCACAAAAA+AGG - chr4_3:52126837-52126856 Msa0646390:intron 35.0%
GACTATACCTCGATAATTCA+TGG - chr4_3:52126861-52126880 Msa0646390:intron 35.0%
AAATCAGACAACAATGCTCA+AGG - chr4_3:52127280-52127299 Msa0646390:intron 35.0%
AATCAGACAACAATGCTCAA+GGG - chr4_3:52127281-52127300 Msa0646390:intron 35.0%
!!! TCGGTTAGATTTTTTTGCTG+TGG - chr4_3:52127318-52127337 Msa0646390:CDS 35.0%
! TCATTTTATAGGCAGACTAG+TGG - chr4_3:52127412-52127431 Msa0646390:CDS 35.0%
AGGACTATGATGCGTAAATA+TGG - chr4_3:52127437-52127456 Msa0646390:CDS 35.0%
! ACAAGATGCTATTTACAAGC+TGG - chr4_3:52127704-52127723 Msa0646390:intron 35.0%
GATCTTATGTTAGTTGTTGG+TGG - chr4_3:52127741-52127760 Msa0646390:intron 35.0%
TTGTATGCTATTCTGTTTCC+TGG + chr4_3:52127858-52127877 None:intergenic 35.0%
GATGTTACACCAATCCTTAA+TGG + chr4_3:52128043-52128062 None:intergenic 35.0%
! TTAAGGATTGGTGTAACATC+TGG - chr4_3:52128043-52128062 Msa0646390:intron 35.0%
CAGGATGAACTTGAAATTAC+AGG - chr4_3:52128444-52128463 Msa0646390:CDS 35.0%
!! TAGATTGGTCTATGATGACA+AGG + chr4_3:52128573-52128592 None:intergenic 35.0%
ATGTCTCTATTGACCAGTAA+TGG - chr4_3:52128641-52128660 Msa0646390:five_prime_UTR 35.0%
TCGAATGATAGTACCATTAC+TGG + chr4_3:52128657-52128676 None:intergenic 35.0%
ACTGTCAGGACAAAGACAAA+CGG + chr4_3:52124725-52124744 None:intergenic 40.0%
TGTCCTGACAGTATCTTCAA+TGG - chr4_3:52124733-52124752 Msa0646390:three_prime_UTR 40.0%
!! TTTTGGGTCAAAATCGGAGT+CGG + chr4_3:52124861-52124880 None:intergenic 40.0%
TACATGCATCAGTGTCATGT+TGG + chr4_3:52125195-52125214 None:intergenic 40.0%
CGCACACACATATTGAACTA+AGG + chr4_3:52125813-52125832 None:intergenic 40.0%
! CCGAATCCTTTGGATTTTGT+TGG - chr4_3:52125950-52125969 Msa0646390:intron 40.0%
! ATCCTTTGGATTTTGTTGGG+GGG - chr4_3:52125954-52125973 Msa0646390:intron 40.0%
! CCTTATTAACAGTTGGGTTG+TGG + chr4_3:52126059-52126078 None:intergenic 40.0%
CCACAACCCAACTGTTAATA+AGG - chr4_3:52126056-52126075 Msa0646390:CDS 40.0%
TCATGTAAAATGACGGCATG+TGG + chr4_3:52126479-52126498 None:intergenic 40.0%
TGTTTCTTCCCTTCTCCAAT+AGG + chr4_3:52126570-52126589 None:intergenic 40.0%
!! TAGATACCTTTGAAACCCAC+GGG + chr4_3:52126704-52126723 None:intergenic 40.0%
TCATGGTAAATATGCCCATG+AGG - chr4_3:52126878-52126897 Msa0646390:intron 40.0%
AGCAAAAGATGCAGTTGCTA+CGG + chr4_3:52126907-52126926 None:intergenic 40.0%
TTGTTCTTAGTTGCTGACAG+TGG - chr4_3:52126962-52126981 Msa0646390:intron 40.0%
GTTTGCGACTATATTCTTGG+TGG - chr4_3:52127068-52127087 Msa0646390:intron 40.0%
AGCAAGATCAACTACAAGAC+AGG + chr4_3:52127150-52127169 None:intergenic 40.0%
TGGATCAAAGCCCTTAGAAA+GGG + chr4_3:52127231-52127250 None:intergenic 40.0%
! TTGCAATGCCAAGTTTTACC+AGG + chr4_3:52127262-52127281 None:intergenic 40.0%
TATGATGCGTAAATATGGCG+TGG - chr4_3:52127442-52127461 Msa0646390:CDS 40.0%
CACAATTTGTGATGCTACTC+AGG - chr4_3:52127496-52127515 Msa0646390:intron 40.0%
! AGATGCTATTTACAAGCTGG+TGG - chr4_3:52127707-52127726 Msa0646390:intron 40.0%
!! TTATGTTAGTTGTTGGTGGC+TGG - chr4_3:52127745-52127764 Msa0646390:intron 40.0%
ATTGACAGCGAGCAAAGAAT+TGG - chr4_3:52127831-52127850 Msa0646390:intron 40.0%
TTCTACCAAAGGGTCCATTA+AGG - chr4_3:52128026-52128045 Msa0646390:intron 40.0%
AGAAAATACCTTGTCAGGTG+TGG + chr4_3:52128074-52128093 None:intergenic 40.0%
GCAAGAGAAAATACCTTGTC+AGG + chr4_3:52128079-52128098 None:intergenic 40.0%
TGCATCATTGGATTTCACAC+AGG - chr4_3:52128318-52128337 Msa0646390:intron 40.0%
ATCATTGGATTTCACACAGG+TGG - chr4_3:52128321-52128340 Msa0646390:intron 40.0%
CATTACAACTCGTGTAACGT+AGG - chr4_3:52128389-52128408 Msa0646390:CDS 40.0%
TCATCCATGCATTTGTACTC+TGG - chr4_3:52128600-52128619 Msa0646390:exon 40.0%
CTGTCAGGACAAAGACAAAC+GGG + chr4_3:52124724-52124743 None:intergenic 45.0%
GAGCCATTGAAGATACTGTC+AGG + chr4_3:52124739-52124758 None:intergenic 45.0%
TGGGACTTTATGCCTCTGTT+TGG + chr4_3:52125591-52125610 None:intergenic 45.0%
AACCCCCCAACAAAATCCAA+AGG + chr4_3:52125959-52125978 None:intergenic 45.0%
! ATTTTGTTGGGGGGTTGAGA+GGG - chr4_3:52125963-52125982 Msa0646390:intron 45.0%
CAGAGATCAATGAAGGCGAT+AGG + chr4_3:52126093-52126112 None:intergenic 45.0%
GAGGGTCCTATATTTAGGGA+CGG + chr4_3:52126141-52126160 None:intergenic 45.0%
GGACCCTCTTAGTCAAATCA+TGG - chr4_3:52126153-52126172 Msa0646390:intron 45.0%
TGTGGAAGAAAACAAGGCAC+TGG + chr4_3:52126461-52126480 None:intergenic 45.0%
ACGGCATGTGGAAGAAAACA+AGG + chr4_3:52126467-52126486 None:intergenic 45.0%
! GTGCTTGATGATTGATGCAG+CGG - chr4_3:52126517-52126536 Msa0646390:CDS 45.0%
! GTAGTCATACTGCCTGCTTT+TGG - chr4_3:52126615-52126634 Msa0646390:intron 45.0%
AGTCAACATCTCGTCAACTG+CGG + chr4_3:52126643-52126662 None:intergenic 45.0%
AGTTGCTACGGTTTCCTCAT+GGG + chr4_3:52126895-52126914 None:intergenic 45.0%
! GTAGCAACTGCATCTTTTGC+TGG - chr4_3:52126906-52126925 Msa0646390:intron 45.0%
AGTCGCAAACATATTCAGCC+TGG + chr4_3:52127058-52127077 None:intergenic 45.0%
AAATGCCTCTCTGGTTGAAC+TGG + chr4_3:52127108-52127127 None:intergenic 45.0%
!!! AACCAGAGAGGCATTTTTCG+AGG - chr4_3:52127112-52127131 Msa0646390:intron 45.0%
AACCTCGAAAAATGCCTCTC+TGG + chr4_3:52127117-52127136 None:intergenic 45.0%
CTGGATCAAAGCCCTTAGAA+AGG + chr4_3:52127232-52127251 None:intergenic 45.0%
! AGTTTTACCAGGTCACTGTC+TGG + chr4_3:52127251-52127270 None:intergenic 45.0%
GACAGTGACCTGGTAAAACT+TGG - chr4_3:52127251-52127270 Msa0646390:intron 45.0%
AAGGGAGAGACTGAAGAGAT+CGG - chr4_3:52127299-52127318 Msa0646390:CDS 45.0%
TTATAGGCAGACTAGTGGAG+AGG - chr4_3:52127417-52127436 Msa0646390:CDS 45.0%
CAAGCTGGTGGAGAAAGATA+TGG - chr4_3:52127719-52127738 Msa0646390:intron 45.0%
AACGCGGAATTCCTTCTTAC+TGG - chr4_3:52127808-52127827 Msa0646390:intron 45.0%
TCGCTGTCAATCCAGTAAGA+AGG + chr4_3:52127822-52127841 None:intergenic 45.0%
! CCAATCCTTAATGGACCCTT+TGG + chr4_3:52128034-52128053 None:intergenic 45.0%
CCAAAGGGTCCATTAAGGAT+TGG - chr4_3:52128031-52128050 Msa0646390:intron 45.0%
ATTGGATTTCACACAGGTGG+TGG - chr4_3:52128324-52128343 Msa0646390:intron 45.0%
GGTGGAAGATGCTCTTATCA+AGG - chr4_3:52128342-52128361 Msa0646390:intron 45.0%
AACGGACGGAGAAGAGTTTG+CGG + chr4_3:52124832-52124851 None:intergenic 50.0%
CCTTGTGACCAAAGCCTTTG+CGG + chr4_3:52124922-52124941 None:intergenic 50.0%
CTCGCGAGTCATGAGTTTGA+GGG + chr4_3:52124951-52124970 None:intergenic 50.0%
ACTCGCGAGTCATGAGTTTG+AGG + chr4_3:52124952-52124971 None:intergenic 50.0%
GTGATGCTAGCCGAATCCTT+TGG - chr4_3:52125940-52125959 Msa0646390:intron 50.0%
! GATTTTGTTGGGGGGTTGAG+AGG - chr4_3:52125962-52125981 Msa0646390:intron 50.0%
!! GGAAGAAAACAAGGCACTGG+CGG + chr4_3:52126458-52126477 None:intergenic 50.0%
ATGATTGATGCAGCGGCTAG+AGG - chr4_3:52126524-52126543 Msa0646390:intron 50.0%
TCGTTGATACAACTTGCCCG+TGG - chr4_3:52126685-52126704 Msa0646390:CDS 50.0%
CGTTGATACAACTTGCCCGT+GGG - chr4_3:52126686-52126705 Msa0646390:CDS 50.0%
AACTTGCCCGTGGGTTTCAA+AGG - chr4_3:52126695-52126714 Msa0646390:CDS 50.0%
CAGTTGCTACGGTTTCCTCA+TGG + chr4_3:52126896-52126915 None:intergenic 50.0%
TGGATCCAGTTCAACCAGAG+AGG - chr4_3:52127100-52127119 Msa0646390:intron 50.0%
CTTTGATCCAGACAGTGACC+TGG - chr4_3:52127241-52127260 Msa0646390:intron 50.0%
AGCATCTTGTCGCTCCTGAA+AGG + chr4_3:52127694-52127713 None:intergenic 50.0%
ACACCTACAAGAGATAGCCG+AGG - chr4_3:52127785-52127804 Msa0646390:intron 50.0%
GTTCCTCGGCTATCTCTTGT+AGG + chr4_3:52127791-52127810 None:intergenic 50.0%
AGAAGGAATTCCGCGTTCCT+CGG + chr4_3:52127805-52127824 None:intergenic 50.0%
AGCGAGCAAAGAATTGGTCC+AGG - chr4_3:52127837-52127856 Msa0646390:intron 50.0%
CTTTCAGCATGGTGAGCTTG+TGG - chr4_3:52127991-52128010 Msa0646390:intron 50.0%
GCAGCCAGAGTACAAATGCA+TGG + chr4_3:52128607-52128626 None:intergenic 50.0%
GCATTTGTACTCTGGCTGCA+AGG - chr4_3:52128608-52128627 Msa0646390:exon 50.0%
AGAAGGAACGTCGATGCGAG+TGG + chr4_3:52124792-52124811 None:intergenic 55.0%
CAACGGAAAGTGGACGGAGA+AGG + chr4_3:52124809-52124828 None:intergenic 55.0%
TTGCGGCAACGGAAAGTGGA+CGG + chr4_3:52124815-52124834 None:intergenic 55.0%
GAGTTTGCGGCAACGGAAAG+TGG + chr4_3:52124819-52124838 None:intergenic 55.0%
CGGAGAAGAGTTTGCGGCAA+CGG + chr4_3:52124826-52124845 None:intergenic 55.0%
TGGGTCAAAATCGGAGTCGG+CGG + chr4_3:52124858-52124877 None:intergenic 55.0%
! CCGCAAAGGCTTTGGTCACA+AGG - chr4_3:52124919-52124938 Msa0646390:three_prime_UTR 55.0%
TCAACTGCGGCTCCAAAAGC+AGG + chr4_3:52126630-52126649 None:intergenic 55.0%
CAAGAGATAGCCGAGGAACG+CGG - chr4_3:52127792-52127811 Msa0646390:intron 55.0%
TGGTGCATCCACACCTGACA+AGG - chr4_3:52128063-52128082 Msa0646390:intron 55.0%
AGGAACGTCGATGCGAGTGG+CGG + chr4_3:52124789-52124808 None:intergenic 60.0%
AATCGGAGTCGGCGGAGCAA+CGG + chr4_3:52124850-52124869 None:intergenic 60.0%
GATGCAGCGGCTAGAGGAGA+TGG - chr4_3:52126530-52126549 Msa0646390:intron 60.0%
GAACGTCGATGCGAGTGGCG+GGG + chr4_3:52124787-52124806 None:intergenic 65.0%
GGAACGTCGATGCGAGTGGC+GGG + chr4_3:52124788-52124807 None:intergenic 65.0%
! TGCGAGTGGCGGGGAGACGT+AGG + chr4_3:52124778-52124797 None:intergenic 70.0%
GGAGTCGGCGGAGCAACGGA+CGG + chr4_3:52124846-52124865 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 52124657 52128708 52124657 ID=Msa0646390;Name=Msa0646390
chr4_3 mRNA 52124657 52128708 52124657 ID=Msa0646390-mRNA-1;Parent=Msa0646390;Name=Msa0646390-mRNA-1;_AED=0.11;_eAED=0.11;_QI=95|1|1|1|1|1|10|303|449
chr4_3 exon 52124657 52125025 52124657 ID=Msa0646390-mRNA-1:exon:12744;Parent=Msa0646390-mRNA-1
chr4_3 exon 52125281 52125367 52125281 ID=Msa0646390-mRNA-1:exon:12743;Parent=Msa0646390-mRNA-1
chr4_3 exon 52125481 52125666 52125481 ID=Msa0646390-mRNA-1:exon:12742;Parent=Msa0646390-mRNA-1
chr4_3 exon 52125848 52125942 52125848 ID=Msa0646390-mRNA-1:exon:12741;Parent=Msa0646390-mRNA-1
chr4_3 exon 52126045 52126150 52126045 ID=Msa0646390-mRNA-1:exon:12740;Parent=Msa0646390-mRNA-1
chr4_3 exon 52126232 52126306 52126232 ID=Msa0646390-mRNA-1:exon:12739;Parent=Msa0646390-mRNA-1
chr4_3 exon 52126406 52126537 52126406 ID=Msa0646390-mRNA-1:exon:12738;Parent=Msa0646390-mRNA-1
chr4_3 exon 52126649 52126828 52126649 ID=Msa0646390-mRNA-1:exon:12737;Parent=Msa0646390-mRNA-1
chr4_3 exon 52127288 52127484 52127288 ID=Msa0646390-mRNA-1:exon:12736;Parent=Msa0646390-mRNA-1
chr4_3 exon 52128388 52128708 52128388 ID=Msa0646390-mRNA-1:exon:12735;Parent=Msa0646390-mRNA-1
chr4_3 five_prime_UTR 52128614 52128708 52128614 ID=Msa0646390-mRNA-1:five_prime_utr;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52128388 52128613 52128388 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52127288 52127484 52127288 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52126649 52126828 52126649 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52126406 52126537 52126406 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52126232 52126306 52126232 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52126045 52126150 52126045 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52125848 52125942 52125848 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52125481 52125666 52125481 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52125281 52125367 52125281 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 CDS 52124960 52125025 52124960 ID=Msa0646390-mRNA-1:cds;Parent=Msa0646390-mRNA-1
chr4_3 three_prime_UTR 52124657 52124959 52124657 ID=Msa0646390-mRNA-1:three_prime_utr;Parent=Msa0646390-mRNA-1
Gene Sequence

>Msa0646390

ATGGCTCTCTGTTCGAATCTTTGCCTACGTCTCCCCGCCACTCGCATCGACGTTCCTTCTCCGTCCACTTTCCGTTGCCGCAAACTCTTCTCCGTCCGTTGCTCCGCCGACTCCGATTTTGACCCAAAACTCTTCCGTAAGAATCTCACAAGAAGTGAGAATTATAACCGCAAAGGCTTTGGTCACAAGGAAGAAACCCTCAAACTCATGACTCGCGAGTACACAAGTGACATCATTAAGACTTTGAAGGAAAATGGGTTTGAGTATACATGGGGTAATGTCACTGTGATGCTAGCCGAATCCTTTGGATTTTGTTGGGGGGTTGAGAGGGCTGTTCAAATAGCTTATGAAGCCAGGAAACAATTTCCTGATGAAAAAATTTGGATTACCAATGAAATTATCCACAACCCAACTGTTAATAAGCGGCTAGAGGAGATGGAAGTGCAGAATATTCCTATTGGAGAAGGGAAGAAACAATTTGAGGTTGTCAACAAGGGTGATGTAGTCATACTGCCTGCTTTTGGAGCCGCAGTTGACGAGATGTTGACTTTGAGTGAGAAAAATGTTCAAATCGTTGATACAACTTGCCCGTGGGTTTCAAAGGTATGGAATGTTGTCGAAAAGCACAAAAAAGGAGACTATACCTCGATAATTCATGGTAAATATGCCCATGAGGAAACCGTAGCAACTGCATCTTTTGCTGGAAAATACATAATTGTGAAAAATATGGCAGAGGCTGAATATGTTTGCGACTATATTCTTGGTGGTGAATTTAATGGATCCAGTTCAACCAGAGAGGCATTTTTCGAGAAATTTAAATTTGCCCTTTCTAAGGGCTTTGATCCAGACAGTGACCTGGTAAAACTTGGCATTGCAAATCAGACAACAATGCTCAAGGGAGAGACTGAAGAGATCGGCAGACTAGTGGAGAGGACTATGATGCGTAAATATGGCGTGGAAAACGTTACTGAGCACTTCATAAGCTTCAACACAATTTGTGATGCTACTCAGGAGCGACAAGATGCTATTTACAAGCTGGTGGAGAAAGATATGGATCTTATGTTAGTTGTTGGTGGCTGGAACTCGAGCAACACATCACACCTACAAGAGATAGCCGAGGAACGCGGAATTCCTTCTTACTGGATTGACAGCGAGCAAAGAATTGGTCCAGGAAACAGAATAGCATACAAGTTGAATCATGGTGAGCTTGTGGAGAAAGAAAACTTTCTACCAAAGGGTCCATTAAGGATTGGTGTAACATCTGGTGCATCCACACCTGACAAGGTGGTGGAAGATGCTCTTATCAAGGTGTTTGATTTGAAAAGGGAAGAAGCATTACAACTCGTGTAA

Protein sequence

>Msa0646390

MALCSNLCLRLPATRIDVPSPSTFRCRKLFSVRCSADSDFDPKLFRKNLTRSENYNRKGFGHKEETLKLMTREYTSDIIKTLKENGFEYTWGNVTVMLAESFGFCWGVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMEVQNIPIGEGKKQFEVVNKGDVVILPAFGAAVDEMLTLSEKNVQIVDTTCPWVSKVWNVVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKNMAEAEYVCDYILGGEFNGSSSTREAFFEKFKFALSKGFDPDSDLVKLGIANQTTMLKGETEEIGRLVERTMMRKYGVENVTEHFISFNTICDATQERQDAIYKLVEKDMDLMLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENFLPKGPLRIGVTSGASTPDKVVEDALIKVFDLKREEALQLV*