AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0270610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0270610 MtrunA17_Chr2g0326561 79.670 728 72 13 1 660 1 720 0.0 1091
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0270610 AT5G60600.1 68.579 732 146 17 1 660 1 720 0.0 949
Msa0270610 AT5G60600.2 68.443 732 146 17 1 660 1 719 0.0 947
Msa0270610 AT5G60600.4 67.382 699 139 15 1 624 1 685 0.0 892
Msa0270610 AT5G60600.5 67.382 699 139 15 1 624 1 685 0.0 892
Msa0270610 AT5G60600.3 67.382 699 139 15 1 624 1 685 0.0 892

Find 218 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTTGGCATGCCATTTA+AGG 0.134280 2_3:-1834409 Msa0270610:intron
GAGATGGCTGATGCAGATTT+TGG 0.159888 2_3:-1832919 Msa0270610:CDS
TGAACCATACAACTCCTTTC+TGG 0.188987 2_3:+1834926 None:intergenic
GGTCCCGACCCAACGGAAAT+TGG 0.206545 2_3:-1832522 Msa0270610:three_prime_UTR
AGGACATGTGATTCTGGTTT+GGG 0.212043 2_3:-1837044 Msa0270610:CDS
GTGATTCTGGTTTGGGGTTT+GGG 0.229538 2_3:-1837037 Msa0270610:CDS
TGTGATTCTGGTTTGGGGTT+TGG 0.230302 2_3:-1837038 Msa0270610:CDS
AACCAATCTGTTAGTTTATT+CGG 0.238205 2_3:-1832221 Msa0270610:three_prime_UTR
TAATATTATATAAGAATTCT+TGG 0.244689 2_3:-1832281 Msa0270610:three_prime_UTR
AGTCATGGTCTGAATTCTTA+TGG 0.249035 2_3:+1836378 None:intergenic
GGGTATGTGGGAGGTGCTCC+TGG 0.251432 2_3:-1832898 Msa0270610:CDS
TTCTCATGCTGGAGCTCTTC+TGG 0.251769 2_3:-1833433 Msa0270610:CDS
TTAGTGACCAAAACCTTAAA+TGG 0.264403 2_3:+1834396 None:intergenic
CGTGTCAACCCTGGAAATTT+TGG 0.274976 2_3:-1835937 Msa0270610:intron
TTTGACTTCCAGCGCCGTTC+TGG 0.281722 2_3:-1834782 Msa0270610:CDS
CTAATTCTGTCTTCTGTATA+AGG 0.295941 2_3:+1833762 None:intergenic
ACCCAAAAGTTGACTTCCTT+TGG 0.298868 2_3:+1836897 None:intergenic
ATCCAAAGGAAGTCAACTTT+TGG 0.309626 2_3:-1836899 Msa0270610:CDS
TTATATAATATTATTATGAT+TGG 0.322320 2_3:+1832291 None:intergenic
GCTCTTCTGGTTGACGGGCT+TGG 0.324246 2_3:-1833420 Msa0270610:CDS
CAGGACATGTGATTCTGGTT+TGG 0.324391 2_3:-1837045 Msa0270610:CDS
TATATAATATTATTATGATT+GGG 0.338510 2_3:+1832292 None:intergenic
CATTATTACAAAATTAAAAC+AGG 0.339750 2_3:-1837602 Msa0270610:five_prime_UTR
AAGGTCAAACAAATAAAGTA+TGG 0.341556 2_3:-1832379 Msa0270610:three_prime_UTR
CAACATCTTTGAGAATTTCC+AGG 0.354686 2_3:+1833811 None:intergenic
AGCCTCAGGACATGTGATTC+TGG 0.355255 2_3:-1837050 Msa0270610:CDS
CTTAAGGTTTACCAGAACTA+TGG 0.363609 2_3:+1834003 None:intergenic
TAATAAAGAGCATGGACGTT+TGG 0.366700 2_3:-1832603 Msa0270610:three_prime_UTR
TGCATCAGCCATCTCTTTCC+CGG 0.368190 2_3:+1832927 None:intergenic
GTTTCTCATGTCAGTCTCCT+TGG 0.376580 2_3:-1834595 Msa0270610:CDS
GTTTCATGTTTCAATATAGT+TGG 0.376805 2_3:-1832428 Msa0270610:three_prime_UTR
GGAGGAAGGTGTCAGTTATC+AGG 0.383175 2_3:-1836962 Msa0270610:CDS
CATAGTTCTGGTAAACCTTA+AGG 0.388958 2_3:-1834002 Msa0270610:CDS
TTTACCAGAACTATGGCATT+TGG 0.390199 2_3:+1834010 None:intergenic
CCAGCCTTGGACATACATTT+CGG 0.394027 2_3:+1835242 None:intergenic
GACCGTATAATGAGCTACTA+TGG 0.397185 2_3:-1835499 Msa0270610:CDS
AATATGGAAATAGGTAGAAA+TGG 0.400896 2_3:-1837815 None:intergenic
GTCGCATCAGATTGCAATCA+TGG 0.406650 2_3:-1832969 Msa0270610:intron
TGGCATTGGAACTCTTCTTC+AGG 0.408826 2_3:-1835152 Msa0270610:intron
AATTACCTGTGAATCCCATT+TGG 0.409322 2_3:+1833545 None:intergenic
AGTAGATTCAATCTTATTGC+GGG 0.411997 2_3:-1834293 Msa0270610:CDS
AATAAAGAGCATGGACGTTT+GGG 0.414519 2_3:-1832602 Msa0270610:three_prime_UTR
CAACCCTGTTGTCATGGTTC+AGG 0.419745 2_3:-1835283 Msa0270610:CDS
GTGATGAAAATCGCAGATAA+AGG 0.420331 2_3:-1836220 Msa0270610:CDS
AACCCAATTTCCGTTGGGTC+GGG 0.423755 2_3:+1832519 None:intergenic
CACTTGGGAGTTACCGAAGC+TGG 0.424637 2_3:-1835207 Msa0270610:CDS
CTTGCTGCAAAACTCATTGT+TGG 0.427410 2_3:-1834423 Msa0270610:CDS
CTGGAGCTCTTCTGGTTGAC+GGG 0.428570 2_3:-1833425 Msa0270610:CDS
CTCCAGTAGATAGCTCCTTA+AGG 0.430196 2_3:+1833987 None:intergenic
ATTATAGAGGTGCCCTCCAC+CGG 0.430355 2_3:-1834627 Msa0270610:CDS
GTCCCGACCCAACGGAAATT+GGG 0.430902 2_3:-1832521 Msa0270610:three_prime_UTR
TGGTTGACGGGCTTGGAGAC+CGG 0.433376 2_3:-1833413 Msa0270610:intron
GCTGGAGCTCTTCTGGTTGA+CGG 0.433829 2_3:-1833426 Msa0270610:CDS
AGAACTATGGCATTTGGTAA+TGG 0.435179 2_3:+1834016 None:intergenic
ACATACAGTGGTCAATATAA+AGG 0.435292 2_3:+1832493 None:intergenic
CCGTTGGGTCGGGACCTCAT+TGG 0.436889 2_3:+1832529 None:intergenic
ATGGGAGAGCAATGCGCATC+GGG 0.438120 2_3:-1835543 Msa0270610:CDS
CACCATAGTAGCTCATTATA+CGG 0.441397 2_3:+1835497 None:intergenic
TCTTCCCTTGAACAGTTATC+CGG 0.446805 2_3:+1836185 None:intergenic
AGAATTTCCAGGTCTTCATA+AGG 0.447203 2_3:+1833822 None:intergenic
ATTGGTGCTGGTTCTCATGC+TGG 0.449599 2_3:-1833444 Msa0270610:CDS
TATGCCTGAACCATGACAAC+AGG 0.450996 2_3:+1835279 None:intergenic
CGCTTGGCTGTGTCAGTACG+TGG 0.451942 2_3:-1833852 Msa0270610:CDS
AACCTTAAGGAGCTATCTAC+TGG 0.453790 2_3:-1833989 Msa0270610:CDS
AGATAAAATGATCGCATAGC+TGG 0.457083 2_3:+1832245 None:intergenic
CTGGGATTATCCGTTACACT+TGG 0.457313 2_3:-1835223 Msa0270610:CDS
AATGAATGTGGTGGGAATGA+CGG 0.459230 2_3:+1833570 None:intergenic
TGCAAAGAATGAAATCTTCA+AGG 0.459544 2_3:-1836983 Msa0270610:CDS
ATATGCATACCAAAATTTCC+AGG 0.462725 2_3:+1835928 None:intergenic
GTCATGGTCTGAATTCTTAT+GGG 0.464636 2_3:+1836379 None:intergenic
AGTCTAGAGAATTGTCTGAT+AGG 0.466179 2_3:+1833596 None:intergenic
CTTAATACAGGGCGAGGAGG+TGG 0.466770 2_3:-1834650 Msa0270610:intron
CCGAAATGTATGTCCAAGGC+TGG 0.469836 2_3:-1835242 Msa0270610:CDS
TTGCAGCAAGTGACTTGTAA+AGG 0.472255 2_3:+1834436 None:intergenic
CAGGAATTCAAATCCTAGTC+AGG 0.472746 2_3:-1836943 Msa0270610:CDS
TTAGATCGATCAAGGCCATC+AGG 0.474307 2_3:+1832623 None:intergenic
ATGAATGTGGTGGGAATGAC+GGG 0.475395 2_3:+1833571 None:intergenic
GCTCTTTATTAGATCGATCA+AGG 0.479136 2_3:+1832615 None:intergenic
GTGATATTACCGAAAACGCC+TGG 0.480228 2_3:+1833105 None:intergenic
AGAACTTGAGCATATTGAAC+AGG 0.480387 2_3:-1835738 Msa0270610:intron
CAAGGATCTATCTCCTCCTC+TGG 0.481068 2_3:+1834988 None:intergenic
GTTCAGCTGCTCTCATTCCA+AGG 0.481941 2_3:+1834950 None:intergenic
AGTTGTGATAGTCCAACTTC+CGG 0.483727 2_3:+1835328 None:intergenic
TGTACAAGGTTGGCAAACCT+TGG 0.484993 2_3:-1834967 Msa0270610:CDS
GATGAAATCTGCAATGGCAT+TGG 0.486499 2_3:-1835166 Msa0270610:CDS
TTCCCTATCAGGCACACGCT+TGG 0.487574 2_3:-1833868 Msa0270610:intron
ATTACCAAATGCCATAGTTC+TGG 0.488647 2_3:-1834014 Msa0270610:CDS
AGGTTTGCCAACCTTGTACA+AGG 0.488958 2_3:+1834970 None:intergenic
GCAATTGACCAGAACGGCGC+TGG 0.489027 2_3:+1834774 None:intergenic
TCTTGCAGGAGTATGTCTCT+TGG 0.489179 2_3:-1833202 Msa0270610:intron
ATCCTCGCCTTCTCCAGCTT+CGG 0.490694 2_3:+1835194 None:intergenic
TTGAATTTGCAAGGATATGC+CGG 0.491812 2_3:-1835347 Msa0270610:CDS
TGCAAGGATATGCCGGAAGT+TGG 0.492565 2_3:-1835340 Msa0270610:CDS
ATCAAATAATGTTCTGCCAC+AGG 0.498808 2_3:+1833174 None:intergenic
AAACTGACCCATCCCGGTGG+AGG 0.498908 2_3:+1834614 None:intergenic
TTTCTTCAAAAGGTGCCTGA+TGG 0.499736 2_3:+1834819 None:intergenic
GGTATGTGGGAGGTGCTCCT+GGG 0.502546 2_3:-1832897 Msa0270610:CDS
ATCCGAATAAACTAACAGAT+TGG 0.506015 2_3:+1832219 None:intergenic
ATATAATATTATTATGATTG+GGG 0.506450 2_3:+1832293 None:intergenic
ATTGTCCGGATAACTGTTCA+AGG 0.506488 2_3:-1836190 Msa0270610:CDS
CCTGGTAGAGATGAGAGAAA+AGG 0.513192 2_3:+1837547 None:intergenic
ACAGCATCAACATCATCTAC+TGG 0.514684 2_3:+1834262 None:intergenic
CTGGAGAAGGCGAGGATGGT+AGG 0.516106 2_3:-1835188 Msa0270610:CDS
CAACCCAATTTCCGTTGGGT+CGG 0.520188 2_3:+1832518 None:intergenic
AGGTCAAACAAATAAAGTAT+GGG 0.520424 2_3:-1832378 Msa0270610:three_prime_UTR
GGATCAACCCAATTTCCGTT+GGG 0.520972 2_3:+1832514 None:intergenic
AGAATCACATGTCCTGAGGC+TGG 0.521171 2_3:+1837052 None:intergenic
AGAGGTGCCCTCCACCGGGA+TGG 0.521953 2_3:-1834622 Msa0270610:CDS
TTCTGTCTTCTGTATAAGGC+AGG 0.522610 2_3:+1833766 None:intergenic
TGGGAGTTATACTCCTTTGT+CGG 0.523317 2_3:-1834053 Msa0270610:CDS
GATGATTTAGTGATTGGTGC+TGG 0.525437 2_3:-1833456 Msa0270610:intron
GAGGTGCCCTCCACCGGGAT+GGG 0.529304 2_3:-1834621 Msa0270610:CDS
TTTGTTAGCTGCTCCGACAA+AGG 0.531649 2_3:+1834040 None:intergenic
AACAAATAAAGTATGGGGTG+GGG 0.533311 2_3:-1832372 Msa0270610:three_prime_UTR
AGGATCAACCCAATTTCCGT+TGG 0.533612 2_3:+1832513 None:intergenic
AAAAGCTCGTCGCACCTCCC+AGG 0.533901 2_3:-1833123 Msa0270610:CDS
CTACTATGGTGATTCACCTA+GGG 0.536285 2_3:-1835485 Msa0270610:CDS
AGCAAGCAACCCTGTTGTCA+TGG 0.537803 2_3:-1835289 Msa0270610:CDS
ATAAAGGAGCTGATATTGTC+CGG 0.540609 2_3:-1836204 Msa0270610:CDS
GATAAGATTCGTGTCAACCC+TGG 0.542097 2_3:-1835946 Msa0270610:CDS
CTTAGTGTCGGTCGTAGTCA+TGG 0.542778 2_3:+1836363 None:intergenic
TGGTGATTCACCTAGGGGAA+TGG 0.542789 2_3:-1835479 Msa0270610:intron
ATGGAAATAGTGAAAGAGTG+AGG 0.544758 2_3:-1837796 Msa0270610:five_prime_UTR
GTAACGGATAATCCCAGCCT+TGG 0.546329 2_3:+1835229 None:intergenic
GCTATGTCAGCTAGTGAAGA+AGG 0.548760 2_3:-1837729 Msa0270610:five_prime_UTR
CATGACTACGACCGACACTA+AGG 0.549273 2_3:-1836362 Msa0270610:CDS
GGACATGTGATTCTGGTTTG+GGG 0.553233 2_3:-1837043 Msa0270610:CDS
AGTGACTTGTAAAGGAGCTC+CGG 0.553456 2_3:+1834444 None:intergenic
GGCGAGGAGGTGGATTATAG+AGG 0.555138 2_3:-1834640 Msa0270610:CDS
CTGAGGCTGGAAAATGAAGC+AGG 0.555201 2_3:+1837065 None:intergenic
GATAGATCCTTGTACAAGGT+TGG 0.556780 2_3:-1834977 Msa0270610:CDS
AAACAAATAAAGTATGGGGT+GGG 0.558276 2_3:-1832373 Msa0270610:three_prime_UTR
CAAAACTGAGGAGGAAAACA+AGG 0.564671 2_3:-1836441 Msa0270610:CDS
CATGAGAAACTGACCCATCC+CGG 0.565413 2_3:+1834608 None:intergenic
AATGTTGGTGATGTGACTAT+TGG 0.567485 2_3:-1836412 Msa0270610:CDS
AATGAAATCTTCAAGGAGGA+AGG 0.569471 2_3:-1836976 Msa0270610:CDS
GATTCACAATACTTCTGCCT+AGG 0.569797 2_3:+1836470 None:intergenic
GGATCTATCTCCTCCTCTGG+TGG 0.570147 2_3:+1834991 None:intergenic
ACCGACACTAAGGATGTCGC+TGG 0.571836 2_3:-1836352 Msa0270610:CDS
ACATAGAGGTCAATCTTCCC+AGG 0.572185 2_3:+1832880 None:intergenic
GATCGATCTAATAAAGAGCA+TGG 0.573945 2_3:-1832611 Msa0270610:three_prime_UTR
GCTACTCGTAAAGCAACAGT+TGG 0.576241 2_3:+1835979 None:intergenic
ATGTCTCTTGGTCCATCCTG+TGG 0.578329 2_3:-1833190 Msa0270610:CDS
TGGTCTGAATTCTTATGGGA+TGG 0.579267 2_3:+1836383 None:intergenic
TCGCATCAGATTGCAATCAT+GGG 0.579766 2_3:-1832968 Msa0270610:intron
TATGGGAGAGCAATGCGCAT+CGG 0.580471 2_3:-1835544 Msa0270610:CDS
TGTCGCTGGAACAGTAGAGC+AGG 0.581544 2_3:-1836338 Msa0270610:intron
CAGCTACAACATACCATTGG+TGG 0.581739 2_3:-1836019 Msa0270610:CDS
AACTGACCCATCCCGGTGGA+GGG 0.581888 2_3:+1834615 None:intergenic
AGTTCAGCAATATCCTGACT+AGG 0.582064 2_3:+1836930 None:intergenic
CAGTAGATTCAATCTTATTG+CGG 0.582957 2_3:-1834294 Msa0270610:CDS
GCTACTATGGTGATTCACCT+AGG 0.583135 2_3:-1835486 Msa0270610:CDS
TATGCATACCAAAATTTCCA+GGG 0.583326 2_3:+1835929 None:intergenic
TTATAGAGGTGCCCTCCACC+GGG 0.583410 2_3:-1834626 Msa0270610:CDS
GCACATTCATGCATACTATG+TGG 0.584421 2_3:+1837750 None:intergenic
TGATATTACCGAAAACGCCT+GGG 0.589450 2_3:+1833106 None:intergenic
CGATGGAGCAAGCAACCTGA+TGG 0.590545 2_3:-1832638 Msa0270610:exon
GGAGTTACCGAAGCTGGAGA+AGG 0.590804 2_3:-1835201 Msa0270610:CDS
GAAGCTGGAGAAGGCGAGGA+TGG 0.592071 2_3:-1835192 Msa0270610:CDS
GGGAAGATTGACCTCTATGT+CGG 0.593339 2_3:-1832877 Msa0270610:CDS
GGATGAGCCTTATGAAGACC+TGG 0.593964 2_3:-1833829 Msa0270610:CDS
CTTCTGTATAAGGCAGGTCA+TGG 0.594079 2_3:+1833772 None:intergenic
GTCCAGCTACAACATACCAT+TGG 0.595605 2_3:-1836022 Msa0270610:intron
AATAATGTTCTGCCACAGGA+TGG 0.596077 2_3:+1833178 None:intergenic
CGAAATGTATGTCCAAGGCT+GGG 0.596686 2_3:-1835241 Msa0270610:CDS
TTAGTAGAGTGCACGCAGCA+AGG 0.597435 2_3:-1833743 Msa0270610:CDS
TGGGATTATCCGTTACACTT+GGG 0.599792 2_3:-1835222 Msa0270610:CDS
ATGCGCATCGGGACAAACCA+CGG 0.601789 2_3:-1835532 Msa0270610:CDS
GCTTGGCTGTGTCAGTACGT+GGG 0.602866 2_3:-1833851 Msa0270610:CDS
TGAACTTCAACTGCATCCAA+AGG 0.605107 2_3:-1836913 Msa0270610:CDS
TATAATATTATTATGATTGG+GGG 0.605898 2_3:+1832294 None:intergenic
TCGGTAACTCCCAAGTGTAA+CGG 0.606306 2_3:+1835213 None:intergenic
GTGTTTCTGATTAGCCAATG+AGG 0.607647 2_3:-1832543 Msa0270610:three_prime_UTR
TACCGAAGCTGGAGAAGGCG+AGG 0.608709 2_3:-1835196 Msa0270610:CDS
TGTTACCTTTAACTGCTCCA+AGG 0.610121 2_3:+1834578 None:intergenic
TTGGGTAGACCCTCCTGTAG+AGG 0.610602 2_3:-1832584 Msa0270610:three_prime_UTR
AAATGAATGTCAGCCACCAA+TGG 0.615444 2_3:+1836006 None:intergenic
CCAATGAGGTCCCGACCCAA+CGG 0.616084 2_3:-1832529 Msa0270610:three_prime_UTR
TGACTTTCTAAATACAAGTG+AGG 0.616824 2_3:+1832123 None:intergenic
AGGAGATAGATCCTTGTACA+AGG 0.619161 2_3:-1834981 Msa0270610:CDS
GGTCAAACAAATAAAGTATG+GGG 0.620746 2_3:-1832377 Msa0270610:three_prime_UTR
CAAACAAATAAAGTATGGGG+TGG 0.622933 2_3:-1832374 Msa0270610:three_prime_UTR
TGGAAATAGTGAAAGAGTGA+GGG 0.624876 2_3:-1837795 Msa0270610:five_prime_UTR
AGAGCAGCTGAACTCCAGAA+AGG 0.626653 2_3:-1834940 Msa0270610:CDS
AAAACAAGGACAGTGAATGT+TGG 0.629298 2_3:-1836427 Msa0270610:CDS
GTAGCCGAAATGTATGTCCA+AGG 0.633774 2_3:-1835246 Msa0270610:CDS
ATGTTACCTTGCCGACATAG+AGG 0.636576 2_3:+1832866 None:intergenic
TCTCACAGAACCACCAGAGG+AGG 0.641000 2_3:-1835001 Msa0270610:CDS
GATTGACCTCTATGTCGGCA+AGG 0.643965 2_3:-1832872 Msa0270610:intron
ATTATTACAAAATTAAAACA+GGG 0.645574 2_3:-1837601 Msa0270610:five_prime_UTR
AAAGGACTGACCATTCCCCT+AGG 0.646068 2_3:+1835469 None:intergenic
TCCAGCGACATCCTTAGTGT+CGG 0.647152 2_3:+1836351 None:intergenic
TGGTAGGATGAAATCTGCAA+TGG 0.647506 2_3:-1835172 Msa0270610:CDS
CATCTTAATACAGGGCGAGG+AGG 0.654159 2_3:-1834653 Msa0270610:intron
GGTGAAGCGTGCAATTGCGA+TGG 0.654852 2_3:-1832655 Msa0270610:CDS
GCAATGGCAATTGACCAGAA+CGG 0.656429 2_3:+1834768 None:intergenic
TTCTCTCACAGAACCACCAG+AGG 0.661417 2_3:-1835004 Msa0270610:CDS
CTTGGCTGTGTCAGTACGTG+GGG 0.661844 2_3:-1833850 Msa0270610:CDS
TCCCATTTGGAAAATGAATG+TGG 0.666059 2_3:+1833558 None:intergenic
TAAATGGTCCGGGAAAGAGA+TGG 0.666582 2_3:-1832935 Msa0270610:CDS
ATCACTGCACAAAACTGAGG+AGG 0.670723 2_3:-1836450 Msa0270610:CDS
AACCAGAATCACATGTCCTG+AGG 0.672465 2_3:+1837048 None:intergenic
TGAATCACTGCACAAAACTG+AGG 0.672542 2_3:-1836453 Msa0270610:CDS
ATTTGGAAAATGAATGTGGT+GGG 0.672601 2_3:+1833562 None:intergenic
TACTATGGTGATTCACCTAG+GGG 0.673070 2_3:-1835484 Msa0270610:CDS
TTGTCCGGATAACTGTTCAA+GGG 0.673589 2_3:-1836189 Msa0270610:CDS
ATGCCTGAACCATGACAACA+GGG 0.675247 2_3:+1835280 None:intergenic
ACATTTCGGCTACAAGTAAG+CGG 0.677087 2_3:+1835256 None:intergenic
ATAACATATACTACATACAG+TGG 0.677875 2_3:+1832481 None:intergenic
GCATCAACATCATCTACTGG+AGG 0.683817 2_3:+1834265 None:intergenic
TACGGTCAGAAAGACTGCCG+TGG 0.688850 2_3:+1835515 None:intergenic
AAAGAATGAAATCTTCAAGG+AGG 0.702362 2_3:-1836980 Msa0270610:CDS
CATTTGGAAAATGAATGTGG+TGG 0.706597 2_3:+1833561 None:intergenic
GAGAAACTGACCCATCCCGG+TGG 0.720942 2_3:+1834611 None:intergenic
TCTGTGTTAAGGATTGATTG+TGG 0.729656 2_3:-1837113 Msa0270610:intron
TATTACCGAAAACGCCTGGG+AGG 0.735263 2_3:+1833109 None:intergenic
GTAGAGTGCACGCAGCAAGG+CGG 0.776309 2_3:-1833740 Msa0270610:intron
CTAGTGAAGAAGGATAATCG+TGG 0.776745 2_3:-1837719 Msa0270610:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTGTAATAATGAAA+AGG + chr2_3:1832320-1832339 None:intergenic 10.0%
!! ATTATTACAAAATTAAAACA+GGG - chr2_3:1832324-1832343 Msa0270610:three_prime_UTR 10.0%
!!! TTTTTAATCAATAGAAAAAA+GGG + chr2_3:1832492-1832511 None:intergenic 10.0%
!!! TTAAAAAGATTATATTTTTG+TGG - chr2_3:1832505-1832524 Msa0270610:three_prime_UTR 10.0%
!! TAATATTAATAATAACACTA+TGG + chr2_3:1833387-1833406 None:intergenic 10.0%
!!! TTTTATTTTTTATTGTTGAA+TGG - chr2_3:1837203-1837222 Msa0270610:intron 10.0%
!! ATATAATATTATTATGATTG+GGG + chr2_3:1837635-1837654 None:intergenic 10.0%
!! TAATATTATATAAGAATTCT+TGG - chr2_3:1837644-1837663 Msa0270610:five_prime_UTR 10.0%
!!! TTTAGTATATTTTTTTCAAT+AGG + chr2_3:1837756-1837775 None:intergenic 10.0%
!! TGAAAAAAATATACTAAATA+TGG - chr2_3:1837758-1837777 Msa0270610:five_prime_UTR 10.0%
!! CATTATTACAAAATTAAAAC+AGG - chr2_3:1832323-1832342 Msa0270610:three_prime_UTR 15.0%
!!! CTTTTTAATCAATAGAAAAA+AGG + chr2_3:1832493-1832512 None:intergenic 15.0%
!!! CTTTTGATTAATAGAAAAAA+GGG + chr2_3:1832621-1832640 None:intergenic 15.0%
!!! TCTTTTGATTAATAGAAAAA+AGG + chr2_3:1832622-1832641 None:intergenic 15.0%
!!! TATATCTCAAATTTTTATCA+AGG - chr2_3:1834231-1834250 Msa0270610:intron 15.0%
!!! ATATCTCAAATTTTTATCAA+GGG - chr2_3:1834232-1834251 Msa0270610:intron 15.0%
!!! AGAATTTTATAAAGCAAAAT+AGG + chr2_3:1834325-1834344 None:intergenic 15.0%
!!! ATTTTGCTTTATAAAATTCT+AGG - chr2_3:1834325-1834344 Msa0270610:intron 15.0%
!! TTGAAAAATGTAAGAAATAT+GGG - chr2_3:1834364-1834383 Msa0270610:intron 15.0%
!!! AACAATATAATAATTTTCTG+AGG + chr2_3:1837480-1837499 None:intergenic 15.0%
!!! CTTTGTTAAAAGAAAATTTT+CGG + chr2_3:1837529-1837548 None:intergenic 15.0%
!! TATAATATTATTATGATTGG+GGG + chr2_3:1837634-1837653 None:intergenic 15.0%
!! TACATTCAAAATATTATCCA+TGG + chr2_3:1833432-1833451 None:intergenic 20.0%
!! TAGCAAATTTACAATTTAGA+TGG - chr2_3:1833652-1833671 Msa0270610:intron 20.0%
!!! AATTTGAGATATAAAACAAG+AGG + chr2_3:1834224-1834243 None:intergenic 20.0%
!!! TTCTTACATTTTTCAACTAA+TGG + chr2_3:1834360-1834379 None:intergenic 20.0%
!! GTTGAAAAATGTAAGAAATA+TGG - chr2_3:1834363-1834382 Msa0270610:intron 20.0%
!! TACTATGAATCTAAAAAAAC+AGG + chr2_3:1836014-1836033 None:intergenic 20.0%
!! ATGTGTGAATTTATATCTAT+TGG - chr2_3:1836034-1836053 Msa0270610:intron 20.0%
!!! TACTAATCTCAACATTTTAT+TGG - chr2_3:1836287-1836306 Msa0270610:intron 20.0%
!! AATAAAAAAAAAACACGATG+TGG + chr2_3:1837190-1837209 None:intergenic 20.0%
!!! CGAAAATTTTCTTTTAACAA+AGG - chr2_3:1837527-1837546 Msa0270610:intron 20.0%
!!! GAGGATTTTTTTAAATACAT+GGG + chr2_3:1837786-1837805 None:intergenic 20.0%
!!! TGAGGATTTTTTTAAATACA+TGG + chr2_3:1837787-1837806 None:intergenic 20.0%
! AGAAAAGGAAAAAGATTCAA+AGG + chr2_3:1832366-1832385 None:intergenic 25.0%
!! ACCTTTCTCATTAATTTTTC+AGG - chr2_3:1832430-1832449 Msa0270610:three_prime_UTR 25.0%
! ACCTGAAAAATTAATGAGAA+AGG + chr2_3:1832434-1832453 None:intergenic 25.0%
!!! TGATTTTTCAATCTGTGTTA+AGG - chr2_3:1832801-1832820 Msa0270610:intron 25.0%
!!! AATTAGGTGTTTTTGCTTAT+AGG - chr2_3:1833129-1833148 Msa0270610:CDS 25.0%
!! ACAGTTTGACTTATAATAAG+TGG + chr2_3:1833197-1833216 None:intergenic 25.0%
!!! ATATTTTGAATGTAGTTCCT+AGG - chr2_3:1833438-1833457 Msa0270610:CDS 25.0%
!! TTTTTCTTCTTTCTATTGTC+AGG - chr2_3:1833683-1833702 Msa0270610:intron 25.0%
! TAAAGCAAAATAGGTCAATA+AGG + chr2_3:1834316-1834335 None:intergenic 25.0%
! GATGTTAGACATTAGAAATT+AGG + chr2_3:1835048-1835067 None:intergenic 25.0%
!!! ATTTTAACCTCTTTTTGCAA+TGG + chr2_3:1835176-1835195 None:intergenic 25.0%
! TAAAAATCAGGGAAATAAAG+AGG + chr2_3:1835455-1835474 None:intergenic 25.0%
!!! TAACTTGTTATTTGAATCAC+AGG + chr2_3:1835574-1835593 None:intergenic 25.0%
! ATAACTTGACAATATAGAGA+TGG + chr2_3:1835760-1835779 None:intergenic 25.0%
! AAGACTGATTGATATTAGTA+TGG - chr2_3:1835852-1835871 Msa0270610:intron 25.0%
! AGACTGATTGATATTAGTAT+GGG - chr2_3:1835853-1835872 Msa0270610:intron 25.0%
! TATGAATCTAAAAAAACAGG+AGG + chr2_3:1836011-1836030 None:intergenic 25.0%
!! TTTTGAACATGTTCTATGAA+GGG + chr2_3:1836858-1836877 None:intergenic 25.0%
!! ATTTTGAACATGTTCTATGA+AGG + chr2_3:1836859-1836878 None:intergenic 25.0%
! ATAACATATACTACATACAG+TGG + chr2_3:1837447-1837466 None:intergenic 25.0%
! GTTTCATGTTTCAATATAGT+TGG - chr2_3:1837497-1837516 Msa0270610:intron 25.0%
! AAGGTCAAACAAATAAAGTA+TGG - chr2_3:1837546-1837565 Msa0270610:intron 25.0%
! AGGTCAAACAAATAAAGTAT+GGG - chr2_3:1837547-1837566 Msa0270610:intron 25.0%
!! AACCAATCTGTTAGTTTATT+CGG - chr2_3:1837704-1837723 Msa0270610:five_prime_UTR 25.0%
TTCAGGTAGAATAGAAAACT+TGG - chr2_3:1832447-1832466 Msa0270610:three_prime_UTR 30.0%
TTGAGCTCAATTATGAAACT+TGG - chr2_3:1832576-1832595 Msa0270610:three_prime_UTR 30.0%
GATTGATTGTGGTTCAAAAA+TGG - chr2_3:1832823-1832842 Msa0270610:intron 30.0%
TGCAAAGAATGAAATCTTCA+AGG - chr2_3:1832942-1832961 Msa0270610:CDS 30.0%
AAAGAATGAAATCTTCAAGG+AGG - chr2_3:1832945-1832964 Msa0270610:CDS 30.0%
!!! TGCTTCAATTGTTTTGTTTG+TGG - chr2_3:1833064-1833083 Msa0270610:intron 30.0%
ACCTAATTAGTCATTAGAGA+TGG + chr2_3:1833117-1833136 None:intergenic 30.0%
! TTTTGCTTATAGGTTCTGTT+TGG - chr2_3:1833139-1833158 Msa0270610:CDS 30.0%
AAGAACTTGTGAAACAGATT+GGG + chr2_3:1833324-1833343 None:intergenic 30.0%
TAAGAACTTGTGAAACAGAT+TGG + chr2_3:1833325-1833344 None:intergenic 30.0%
! ATAACACTATGGTTCTGTTT+GGG + chr2_3:1833376-1833395 None:intergenic 30.0%
! AATAACACTATGGTTCTGTT+TGG + chr2_3:1833377-1833396 None:intergenic 30.0%
CAAAATATTATCCATGGATC+AGG + chr2_3:1833426-1833445 None:intergenic 30.0%
ATTGCGAGTTATATTTGACA+TGG - chr2_3:1833825-1833844 Msa0270610:CDS 30.0%
TATGCATACCAAAATTTCCA+GGG + chr2_3:1833999-1834018 None:intergenic 30.0%
ATATGCATACCAAAATTTCC+AGG + chr2_3:1834000-1834019 None:intergenic 30.0%
TTGAGATATAAAACAAGAGG+CGG + chr2_3:1834221-1834240 None:intergenic 30.0%
!! AATCTGCTTTTGAATTTGCA+AGG - chr2_3:1834569-1834588 Msa0270610:intron 30.0%
! TTGACAATATGCTTTTCATC+AGG - chr2_3:1834874-1834893 Msa0270610:intron 30.0%
TGTACTTTCCATCTTAATAC+AGG - chr2_3:1835263-1835282 Msa0270610:CDS 30.0%
GTACTTTCCATCTTAATACA+GGG - chr2_3:1835264-1835283 Msa0270610:CDS 30.0%
GATATATTGACAGGAACATT+TGG + chr2_3:1835408-1835427 None:intergenic 30.0%
TTAGTGACCAAAACCTTAAA+TGG + chr2_3:1835532-1835551 None:intergenic 30.0%
CAGTAGATTCAATCTTATTG+CGG - chr2_3:1835631-1835650 Msa0270610:intron 30.0%
AGTAGATTCAATCTTATTGC+GGG - chr2_3:1835632-1835651 Msa0270610:intron 30.0%
TAAGAACTAAAACCTCACTT+TGG - chr2_3:1835685-1835704 Msa0270610:intron 30.0%
GAAGTAAATGCTCCTAATTT+AGG + chr2_3:1835719-1835738 None:intergenic 30.0%
!!! CATTTTTGGTCTATGATTAG+CGG - chr2_3:1835817-1835836 Msa0270610:intron 30.0%
!!! ATTTTTGGTCTATGATTAGC+GGG - chr2_3:1835818-1835837 Msa0270610:intron 30.0%
CTAATTCTGTCTTCTGTATA+AGG + chr2_3:1836166-1836185 None:intergenic 30.0%
!! AACAATTTGCTGCATCAATA+TGG - chr2_3:1836228-1836247 Msa0270610:intron 30.0%
!! ACAATTTGCTGCATCAATAT+GGG - chr2_3:1836229-1836248 Msa0270610:intron 30.0%
!!! TCAACATTTTATTGGCTTTC+AGG - chr2_3:1836295-1836314 Msa0270610:intron 30.0%
ATTTGGAAAATGAATGTGGT+GGG + chr2_3:1836366-1836385 None:intergenic 30.0%
! ACCACATTCATTTTCCAAAT+GGG - chr2_3:1836366-1836385 Msa0270610:CDS 30.0%
TGTTGAGATTAACAGATATG+TGG - chr2_3:1836413-1836432 Msa0270610:CDS 30.0%
TTATGCTTAACATTTCTTGC+AGG - chr2_3:1836709-1836728 Msa0270610:intron 30.0%
!! TTGCATCTTTGAAATGAGAA+AGG - chr2_3:1836901-1836920 Msa0270610:CDS 30.0%
! CATGGGTTTTTCATTGTAAA+TGG - chr2_3:1836974-1836993 Msa0270610:CDS 30.0%
! GTTTTTCATTGTAAATGGTC+CGG - chr2_3:1836979-1836998 Msa0270610:CDS 30.0%
! TTTTTCATTGTAAATGGTCC+GGG - chr2_3:1836980-1836999 Msa0270610:CDS 30.0%
! CTTAAGTACCAATGTTGATT+TGG - chr2_3:1837093-1837112 Msa0270610:exon 30.0%
ACATACAGTGGTCAATATAA+AGG + chr2_3:1837435-1837454 None:intergenic 30.0%
GGTCAAACAAATAAAGTATG+GGG - chr2_3:1837548-1837567 Msa0270610:five_prime_UTR 30.0%
AAACAAATAAAGTATGGGGT+GGG - chr2_3:1837552-1837571 Msa0270610:five_prime_UTR 30.0%
ATCCGAATAAACTAACAGAT+TGG + chr2_3:1837709-1837728 None:intergenic 30.0%
TGACTTTCTAAATACAAGTG+AGG + chr2_3:1837805-1837824 None:intergenic 30.0%
ATGGAAATAGTGAAAGAGTG+AGG - chr2_3:1832129-1832148 Msa0270610:three_prime_UTR 35.0%
TGGAAATAGTGAAAGAGTGA+GGG - chr2_3:1832130-1832149 Msa0270610:three_prime_UTR 35.0%
! AGAATAGAAAACTTGGTAGC+TGG - chr2_3:1832454-1832473 Msa0270610:three_prime_UTR 35.0%
! ACTTTGTTGTGATTGCTATG+TGG - chr2_3:1832746-1832765 Msa0270610:intron 35.0%
TCTGTGTTAAGGATTGATTG+TGG - chr2_3:1832812-1832831 Msa0270610:intron 35.0%
AATGAAATCTTCAAGGAGGA+AGG - chr2_3:1832949-1832968 Msa0270610:CDS 35.0%
! ATCCAAAGGAAGTCAACTTT+TGG - chr2_3:1833026-1833045 Msa0270610:intron 35.0%
! TCCAAAGGAAGTCAACTTTT+GGG - chr2_3:1833027-1833046 Msa0270610:intron 35.0%
AGTCATTAGAGATGGCATTT+AGG + chr2_3:1833109-1833128 None:intergenic 35.0%
GCCATCTCTAATGACTAATT+AGG - chr2_3:1833113-1833132 Msa0270610:intron 35.0%
! TTTTACTTTAGCCTGATCCA+TGG - chr2_3:1833412-1833431 Msa0270610:intron 35.0%
AAAACAAGGACAGTGAATGT+TGG - chr2_3:1833498-1833517 Msa0270610:intron 35.0%
!! AATGTTGGTGATGTGACTAT+TGG - chr2_3:1833513-1833532 Msa0270610:intron 35.0%
GTCATGGTCTGAATTCTTAT+GGG + chr2_3:1833549-1833568 None:intergenic 35.0%
AGTCATGGTCTGAATTCTTA+TGG + chr2_3:1833550-1833569 None:intergenic 35.0%
GTGATGAAAATCGCAGATAA+AGG - chr2_3:1833705-1833724 Msa0270610:intron 35.0%
ATAAAGGAGCTGATATTGTC+CGG - chr2_3:1833721-1833740 Msa0270610:intron 35.0%
AGAACTTGAGCATATTGAAC+AGG - chr2_3:1834187-1834206 Msa0270610:intron 35.0%
GTCAATAAGGATCCATGTAT+GGG + chr2_3:1834303-1834322 None:intergenic 35.0%
CACCATAGTAGCTCATTATA+CGG + chr2_3:1834431-1834450 None:intergenic 35.0%
CAAACACTTCAATGCACAAA+AGG + chr2_3:1834503-1834522 None:intergenic 35.0%
TCCATCTTACTAAGCAATGA+TGG - chr2_3:1834537-1834556 Msa0270610:intron 35.0%
CCATCTTACTAAGCAATGAT+GGG - chr2_3:1834538-1834557 Msa0270610:intron 35.0%
TTGAATTTGCAAGGATATGC+CGG - chr2_3:1834578-1834597 Msa0270610:intron 35.0%
! CAATATGCTTTTCATCAGGA+TGG - chr2_3:1834878-1834897 Msa0270610:intron 35.0%
! TGTCTGTGCTTTTCTTCAAA+AGG + chr2_3:1835119-1835138 None:intergenic 35.0%
TCAATTGCCATTGCAAAAAG+AGG - chr2_3:1835166-1835185 Msa0270610:CDS 35.0%
! TTAAGATGGAAAGTACAACG+TGG + chr2_3:1835260-1835279 None:intergenic 35.0%
AACATTTGGTCAGACCAAAA+AGG + chr2_3:1835394-1835413 None:intergenic 35.0%
ATAGTATGCCCTGTATATTC+AGG - chr2_3:1835599-1835618 Msa0270610:intron 35.0%
AAATGCTCCTAATTTAGGCT+TGG + chr2_3:1835714-1835733 None:intergenic 35.0%
GACAATATAGAGATGGTTTG+CGG + chr2_3:1835753-1835772 None:intergenic 35.0%
ATAGACCAAAAATGAGAGAG+AGG + chr2_3:1835811-1835830 None:intergenic 35.0%
AGAACTATGGCATTTGGTAA+TGG + chr2_3:1835912-1835931 None:intergenic 35.0%
ATTACCAAATGCCATAGTTC+TGG - chr2_3:1835911-1835930 Msa0270610:intron 35.0%
TTTACCAGAACTATGGCATT+TGG + chr2_3:1835918-1835937 None:intergenic 35.0%
CTTAAGGTTTACCAGAACTA+TGG + chr2_3:1835925-1835944 None:intergenic 35.0%
!! CATAGTTCTGGTAAACCTTA+AGG - chr2_3:1835923-1835942 Msa0270610:intron 35.0%
!! ATATCTATTGGTTCCCTATC+AGG - chr2_3:1836046-1836065 Msa0270610:intron 35.0%
AGAATTTCCAGGTCTTCATA+AGG + chr2_3:1836106-1836125 None:intergenic 35.0%
! CAACATCTTTGAGAATTTCC+AGG + chr2_3:1836117-1836136 None:intergenic 35.0%
AGTCTAGAGAATTGTCTGAT+AGG + chr2_3:1836332-1836351 None:intergenic 35.0%
CATTTGGAAAATGAATGTGG+TGG + chr2_3:1836367-1836386 None:intergenic 35.0%
! CACCACATTCATTTTCCAAA+TGG - chr2_3:1836365-1836384 Msa0270610:CDS 35.0%
TCCCATTTGGAAAATGAATG+TGG + chr2_3:1836370-1836389 None:intergenic 35.0%
! ATTTTCCAAATGGGATTCAC+AGG - chr2_3:1836375-1836394 Msa0270610:CDS 35.0%
AATTACCTGTGAATCCCATT+TGG + chr2_3:1836383-1836402 None:intergenic 35.0%
TACAGGGATGATTTAGTGAT+TGG - chr2_3:1836463-1836482 Msa0270610:CDS 35.0%
AAAGTCAAAATCTTTGTCCG+AGG + chr2_3:1836552-1836571 None:intergenic 35.0%
!! ACATCTTTCAATTTGCTGCA+AGG - chr2_3:1836582-1836601 Msa0270610:intron 35.0%
ATCAAATAATGTTCTGCCAC+AGG + chr2_3:1836754-1836773 None:intergenic 35.0%
AACATGTTCTATGAAGGGAA+AGG + chr2_3:1836853-1836872 None:intergenic 35.0%
! GAGTTTGACAGTAAGTTGAA+TGG - chr2_3:1837225-1837244 Msa0270610:intron 35.0%
ATTGTTTCAATTGCAGACTG+TGG - chr2_3:1837249-1837268 Msa0270610:intron 35.0%
GCTCTTTATTAGATCGATCA+AGG + chr2_3:1837313-1837332 None:intergenic 35.0%
GATCGATCTAATAAAGAGCA+TGG - chr2_3:1837314-1837333 Msa0270610:intron 35.0%
! TAATAAAGAGCATGGACGTT+TGG - chr2_3:1837322-1837341 Msa0270610:intron 35.0%
! AATAAAGAGCATGGACGTTT+GGG - chr2_3:1837323-1837342 Msa0270610:intron 35.0%
CAAACAAATAAAGTATGGGG+TGG - chr2_3:1837551-1837570 Msa0270610:five_prime_UTR 35.0%
AACAAATAAAGTATGGGGTG+GGG - chr2_3:1837553-1837572 Msa0270610:five_prime_UTR 35.0%
AGATAAAATGATCGCATAGC+TGG + chr2_3:1837683-1837702 None:intergenic 35.0%
GCACATTCATGCATACTATG+TGG + chr2_3:1832178-1832197 None:intergenic 40.0%
CTAGTGAAGAAGGATAATCG+TGG - chr2_3:1832206-1832225 Msa0270610:three_prime_UTR 40.0%
AAAGGGTTGTTGAGTTTACC+TGG + chr2_3:1832399-1832418 None:intergenic 40.0%
! AACTCAACAACCCTTTTCCA+AGG - chr2_3:1832403-1832422 Msa0270610:three_prime_UTR 40.0%
AAAGGTTGAGCCTTGGAAAA+GGG + chr2_3:1832416-1832435 None:intergenic 40.0%
TAATGAGAAAGGTTGAGCCT+TGG + chr2_3:1832423-1832442 None:intergenic 40.0%
!! AGGACATGTGATTCTGGTTT+GGG - chr2_3:1832881-1832900 Msa0270610:CDS 40.0%
CAGGAATTCAAATCCTAGTC+AGG - chr2_3:1832982-1833001 Msa0270610:intron 40.0%
AGTTCAGCAATATCCTGACT+AGG + chr2_3:1832998-1833017 None:intergenic 40.0%
TGAACTTCAACTGCATCCAA+AGG - chr2_3:1833012-1833031 Msa0270610:intron 40.0%
! ACCCAAAAGTTGACTTCCTT+TGG + chr2_3:1833031-1833050 None:intergenic 40.0%
! TAGAGATGGCATTTAGGATG+AGG + chr2_3:1833103-1833122 None:intergenic 40.0%
! GTTGCTTTCGTAAGTTATCC+TGG - chr2_3:1833233-1833252 Msa0270610:intron 40.0%
AAGTTATCCTGGAGAGCTTA+TGG - chr2_3:1833244-1833263 Msa0270610:intron 40.0%
CTTAATTCCATAAGCTCTCC+AGG + chr2_3:1833254-1833273 None:intergenic 40.0%
GATTCACAATACTTCTGCCT+AGG + chr2_3:1833458-1833477 None:intergenic 40.0%
TGAATCACTGCACAAAACTG+AGG - chr2_3:1833472-1833491 Msa0270610:intron 40.0%
CAAAACTGAGGAGGAAAACA+AGG - chr2_3:1833484-1833503 Msa0270610:intron 40.0%
TGGTCTGAATTCTTATGGGA+TGG + chr2_3:1833545-1833564 None:intergenic 40.0%
ATTGTCCGGATAACTGTTCA+AGG - chr2_3:1833735-1833754 Msa0270610:intron 40.0%
TTGTCCGGATAACTGTTCAA+GGG - chr2_3:1833736-1833755 Msa0270610:intron 40.0%
TCTTCCCTTGAACAGTTATC+CGG + chr2_3:1833743-1833762 None:intergenic 40.0%
GCGAGTTATATTTGACATGG+TGG - chr2_3:1833828-1833847 Msa0270610:CDS 40.0%
AAATGAATGTCAGCCACCAA+TGG + chr2_3:1833922-1833941 None:intergenic 40.0%
GCTGTGAGACACAAACAATT+TGG + chr2_3:1834113-1834132 None:intergenic 40.0%
AGATATAAAACAAGAGGCGG+TGG + chr2_3:1834218-1834237 None:intergenic 40.0%
TCATTCGTGAACCTTCAGTT+AGG - chr2_3:1834266-1834285 Msa0270610:CDS 40.0%
CATTCGTGAACCTTCAGTTA+GGG - chr2_3:1834267-1834286 Msa0270610:CDS 40.0%
GGTCAATAAGGATCCATGTA+TGG + chr2_3:1834304-1834323 None:intergenic 40.0%
GACCGTATAATGAGCTACTA+TGG - chr2_3:1834426-1834445 Msa0270610:CDS 40.0%
CTACTATGGTGATTCACCTA+GGG - chr2_3:1834440-1834459 Msa0270610:CDS 40.0%
TACTATGGTGATTCACCTAG+GGG - chr2_3:1834441-1834460 Msa0270610:CDS 40.0%
GTCACAGAATAAGAGGCAAA+AGG + chr2_3:1834477-1834496 None:intergenic 40.0%
AAGGTGAGTCACAGAATAAG+AGG + chr2_3:1834484-1834503 None:intergenic 40.0%
CCCATCATTGCTTAGTAAGA+TGG + chr2_3:1834541-1834560 None:intergenic 40.0%
! TTACTAAGCAATGATGGGAC+AGG - chr2_3:1834543-1834562 Msa0270610:intron 40.0%
AGTTGTGATAGTCCAACTTC+CGG + chr2_3:1834600-1834619 None:intergenic 40.0%
ACATTTCGGCTACAAGTAAG+CGG + chr2_3:1834672-1834691 None:intergenic 40.0%
TGGGATTATCCGTTACACTT+GGG - chr2_3:1834703-1834722 Msa0270610:intron 40.0%
TGGTAGGATGAAATCTGCAA+TGG - chr2_3:1834753-1834772 Msa0270610:intron 40.0%
GATGAAATCTGCAATGGCAT+TGG - chr2_3:1834759-1834778 Msa0270610:intron 40.0%
! TGCTTTTCATCAGGATGGAT+TGG - chr2_3:1834883-1834902 Msa0270610:intron 40.0%
AGGAGATAGATCCTTGTACA+AGG - chr2_3:1834944-1834963 Msa0270610:CDS 40.0%
GATAGATCCTTGTACAAGGT+TGG - chr2_3:1834948-1834967 Msa0270610:CDS 40.0%
AACTCCAGAAAGGAGTTGTA+TGG - chr2_3:1834995-1835014 Msa0270610:CDS 40.0%
TGAACCATACAACTCCTTTC+TGG + chr2_3:1835002-1835021 None:intergenic 40.0%
! TCTTACACAGCTTTTCCATC+AGG - chr2_3:1835091-1835110 Msa0270610:intron 40.0%
!! TTTCTTCAAAAGGTGCCTGA+TGG + chr2_3:1835109-1835128 None:intergenic 40.0%
GAAAGTTCAGAGTTTGTGCA+AGG + chr2_3:1835235-1835254 None:intergenic 40.0%
TGTTACCTTTAACTGCTCCA+AGG + chr2_3:1835350-1835369 None:intergenic 40.0%
AGACCAAAAAGGAGAACAAG+GGG + chr2_3:1835383-1835402 None:intergenic 40.0%
CAGACCAAAAAGGAGAACAA+GGG + chr2_3:1835384-1835403 None:intergenic 40.0%
TCAGACCAAAAAGGAGAACA+AGG + chr2_3:1835385-1835404 None:intergenic 40.0%
GCAGAGACAGATATATTGAC+AGG + chr2_3:1835417-1835436 None:intergenic 40.0%
! TCCCTGATTTTTACAGACAC+CGG - chr2_3:1835462-1835481 Msa0270610:intron 40.0%
TCCGGTGTCTGTAAAAATCA+GGG + chr2_3:1835466-1835485 None:intergenic 40.0%
! TTGCAGCAAGTGACTTGTAA+AGG + chr2_3:1835492-1835511 None:intergenic 40.0%
CTTGCTGCAAAACTCATTGT+TGG - chr2_3:1835502-1835521 Msa0270610:CDS 40.0%
! CATTGTTGGCATGCCATTTA+AGG - chr2_3:1835516-1835535 Msa0270610:CDS 40.0%
!! TGGCATGCCATTTAAGGTTT+TGG - chr2_3:1835522-1835541 Msa0270610:CDS 40.0%
TGCCAGATCCTGAATATACA+GGG + chr2_3:1835610-1835629 None:intergenic 40.0%
TTGCCAGATCCTGAATATAC+AGG + chr2_3:1835611-1835630 None:intergenic 40.0%
ACAGCATCAACATCATCTAC+TGG + chr2_3:1835666-1835685 None:intergenic 40.0%
! CTCTTCCTCTCTCTCATTTT+TGG - chr2_3:1835803-1835822 Msa0270610:intron 40.0%
TGGGAGTTATACTCCTTTGT+CGG - chr2_3:1835872-1835891 Msa0270610:intron 40.0%
AACCTTAAGGAGCTATCTAC+TGG - chr2_3:1835936-1835955 Msa0270610:intron 40.0%
! GCTTATAAGCTTTTGCCACA+AGG - chr2_3:1835960-1835979 Msa0270610:CDS 40.0%
AACAGGAGGAAAAGAAAACG+TGG + chr2_3:1835997-1836016 None:intergenic 40.0%
TTCTGTCTTCTGTATAAGGC+AGG + chr2_3:1836162-1836181 None:intergenic 40.0%
! AATGAATGTGGTGGGAATGA+CGG + chr2_3:1836358-1836377 None:intergenic 40.0%
GATGATTTAGTGATTGGTGC+TGG - chr2_3:1836469-1836488 Msa0270610:CDS 40.0%
! CGAGGCTTCTAAAAAGAAAC+CGG + chr2_3:1836534-1836553 None:intergenic 40.0%
!! CGGTTTCTTTTTAGAAGCCT+CGG - chr2_3:1836532-1836551 Msa0270610:intron 40.0%
AATAATGTTCTGCCACAGGA+TGG + chr2_3:1836750-1836769 None:intergenic 40.0%
TGATATTACCGAAAACGCCT+GGG + chr2_3:1836822-1836841 None:intergenic 40.0%
CTATGAAGGGAAAGGAAACT+AGG + chr2_3:1836845-1836864 None:intergenic 40.0%
ATTGCAATCTGATGCGACAT+AGG + chr2_3:1836954-1836973 None:intergenic 40.0%
TCGCATCAGATTGCAATCAT+GGG - chr2_3:1836957-1836976 Msa0270610:CDS 40.0%
! AGATGGCTGATGCAGATTTT+GGG - chr2_3:1837007-1837026 Msa0270610:CDS 40.0%
!! TGATGCAGATTTTGGGTATG+TGG - chr2_3:1837014-1837033 Msa0270610:CDS 40.0%
!! GATGCAGATTTTGGGTATGT+GGG - chr2_3:1837015-1837034 Msa0270610:CDS 40.0%
! TGTAGCTTTTACTCCTCTAC+AGG + chr2_3:1837357-1837376 None:intergenic 40.0%
! GTGTTTCTGATTAGCCAATG+AGG - chr2_3:1837382-1837401 Msa0270610:intron 40.0%
GCTATGTCAGCTAGTGAAGA+AGG - chr2_3:1832196-1832215 Msa0270610:three_prime_UTR 45.0%
CCTGGTAGAGATGAGAGAAA+AGG + chr2_3:1832381-1832400 None:intergenic 45.0%
! CCTTTTCTCTCATCTCTACC+AGG - chr2_3:1832378-1832397 Msa0270610:three_prime_UTR 45.0%
GAAAGGTTGAGCCTTGGAAA+AGG + chr2_3:1832417-1832436 None:intergenic 45.0%
TGTGGTTCAAAAATGGCTGC+TGG - chr2_3:1832830-1832849 Msa0270610:intron 45.0%
AACCAGAATCACATGTCCTG+AGG + chr2_3:1832880-1832899 None:intergenic 45.0%
! CAGGACATGTGATTCTGGTT+TGG - chr2_3:1832880-1832899 Msa0270610:CDS 45.0%
!! GGACATGTGATTCTGGTTTG+GGG - chr2_3:1832882-1832901 Msa0270610:CDS 45.0%
!! TGTGATTCTGGTTTGGGGTT+TGG - chr2_3:1832887-1832906 Msa0270610:CDS 45.0%
!! GTGATTCTGGTTTGGGGTTT+GGG - chr2_3:1832888-1832907 Msa0270610:CDS 45.0%
! CACTATGGTTCTGTTTGGGT+TGG + chr2_3:1833372-1833391 None:intergenic 45.0%
ATCACTGCACAAAACTGAGG+AGG - chr2_3:1833475-1833494 Msa0270610:intron 45.0%
GGTATGTTGTAGCTGGACAT+AGG + chr2_3:1833901-1833920 None:intergenic 45.0%
GTCCAGCTACAACATACCAT+TGG - chr2_3:1833903-1833922 Msa0270610:intron 45.0%
CACCAATGGTATGTTGTAGC+TGG + chr2_3:1833908-1833927 None:intergenic 45.0%
CAGCTACAACATACCATTGG+TGG - chr2_3:1833906-1833925 Msa0270610:intron 45.0%
GCTACTCGTAAAGCAACAGT+TGG + chr2_3:1833949-1833968 None:intergenic 45.0%
GATAAGATTCGTGTCAACCC+TGG - chr2_3:1833979-1833998 Msa0270610:CDS 45.0%
! CGTGTCAACCCTGGAAATTT+TGG - chr2_3:1833988-1834007 Msa0270610:CDS 45.0%
AGATGAGTGACCCTAACTGA+AGG + chr2_3:1834280-1834299 None:intergenic 45.0%
GCTACTATGGTGATTCACCT+AGG - chr2_3:1834439-1834458 Msa0270610:CDS 45.0%
ATGCCTGAACCATGACAACA+GGG + chr2_3:1834648-1834667 None:intergenic 45.0%
TATGCCTGAACCATGACAAC+AGG + chr2_3:1834649-1834668 None:intergenic 45.0%
GTAGCCGAAATGTATGTCCA+AGG - chr2_3:1834679-1834698 Msa0270610:intron 45.0%
CCAGCCTTGGACATACATTT+CGG + chr2_3:1834686-1834705 None:intergenic 45.0%
CGAAATGTATGTCCAAGGCT+GGG - chr2_3:1834684-1834703 Msa0270610:intron 45.0%
CTGGGATTATCCGTTACACT+TGG - chr2_3:1834702-1834721 Msa0270610:intron 45.0%
TCGGTAACTCCCAAGTGTAA+CGG + chr2_3:1834715-1834734 None:intergenic 45.0%
! TGGCATTGGAACTCTTCTTC+AGG - chr2_3:1834773-1834792 Msa0270610:CDS 45.0%
AGGTTTGCCAACCTTGTACA+AGG + chr2_3:1834958-1834977 None:intergenic 45.0%
TGTACAAGGTTGGCAAACCT+TGG - chr2_3:1834958-1834977 Msa0270610:CDS 45.0%
GCAATGGCAATTGACCAGAA+CGG + chr2_3:1835160-1835179 None:intergenic 45.0%
TTCCATCTTAATACAGGGCG+AGG - chr2_3:1835269-1835288 Msa0270610:CDS 45.0%
GTTTCTCATGTCAGTCTCCT+TGG - chr2_3:1835330-1835349 Msa0270610:CDS 45.0%
AGTCTCCTTGGAGCAGTTAA+AGG - chr2_3:1835342-1835361 Msa0270610:CDS 45.0%
! ATCCCCCTTGTTCTCCTTTT+TGG - chr2_3:1835377-1835396 Msa0270610:intron 45.0%
GACCAAAAAGGAGAACAAGG+GGG + chr2_3:1835382-1835401 None:intergenic 45.0%
CTCCGGTGTCTGTAAAAATC+AGG + chr2_3:1835467-1835486 None:intergenic 45.0%
! AGTGACTTGTAAAGGAGCTC+CGG + chr2_3:1835484-1835503 None:intergenic 45.0%
TGCCCTGTATATTCAGGATC+TGG - chr2_3:1835605-1835624 Msa0270610:intron 45.0%
GCATCAACATCATCTACTGG+AGG + chr2_3:1835663-1835682 None:intergenic 45.0%
TTGGCAGCCAAGCCTAAATT+AGG - chr2_3:1835704-1835723 Msa0270610:intron 45.0%
TTTGTTAGCTGCTCCGACAA+AGG + chr2_3:1835888-1835907 None:intergenic 45.0%
CTCCAGTAGATAGCTCCTTA+AGG + chr2_3:1835941-1835960 None:intergenic 45.0%
CTTCTGTATAAGGCAGGTCA+TGG + chr2_3:1836156-1836175 None:intergenic 45.0%
! ATGAATGTGGTGGGAATGAC+GGG + chr2_3:1836357-1836376 None:intergenic 45.0%
CCTAATCAGCTCGTCTTACA+GGG - chr2_3:1836447-1836466 Msa0270610:CDS 45.0%
! TCTTGCAGGAGTATGTCTCT+TGG - chr2_3:1836723-1836742 Msa0270610:intron 45.0%
GTGATATTACCGAAAACGCC+TGG + chr2_3:1836823-1836842 None:intergenic 45.0%
GTCGCATCAGATTGCAATCA+TGG - chr2_3:1836956-1836975 Msa0270610:CDS 45.0%
TAAATGGTCCGGGAAAGAGA+TGG - chr2_3:1836990-1837009 Msa0270610:CDS 45.0%
! GAGATGGCTGATGCAGATTT+TGG - chr2_3:1837006-1837025 Msa0270610:CDS 45.0%
ACATAGAGGTCAATCTTCCC+AGG + chr2_3:1837048-1837067 None:intergenic 45.0%
GGGAAGATTGACCTCTATGT+CGG - chr2_3:1837048-1837067 Msa0270610:CDS 45.0%
ATGTTACCTTGCCGACATAG+AGG + chr2_3:1837062-1837081 None:intergenic 45.0%
TTAGATCGATCAAGGCCATC+AGG + chr2_3:1837305-1837324 None:intergenic 45.0%
! GCTTTTACTCCTCTACAGGA+GGG + chr2_3:1837353-1837372 None:intergenic 45.0%
! AGCTTTTACTCCTCTACAGG+AGG + chr2_3:1837354-1837373 None:intergenic 45.0%
GGATCAACCCAATTTCCGTT+GGG + chr2_3:1837414-1837433 None:intergenic 45.0%
AGGATCAACCCAATTTCCGT+TGG + chr2_3:1837415-1837434 None:intergenic 45.0%
!! TATATAATATTATTATGATT+GGG + chr2_3:1837636-1837655 None:intergenic 5.0%
!! TTATATAATATTATTATGAT+TGG + chr2_3:1837637-1837656 None:intergenic 5.0%
CTGAGGCTGGAAAATGAAGC+AGG + chr2_3:1832863-1832882 None:intergenic 50.0%
! CTGCTTCATTTTCCAGCCTC+AGG - chr2_3:1832861-1832880 Msa0270610:intron 50.0%
AGAATCACATGTCCTGAGGC+TGG + chr2_3:1832876-1832895 None:intergenic 50.0%
AGCCTCAGGACATGTGATTC+TGG - chr2_3:1832875-1832894 Msa0270610:CDS 50.0%
!! GGAGGAAGGTGTCAGTTATC+AGG - chr2_3:1832963-1832982 Msa0270610:intron 50.0%
!! CTTAGTGTCGGTCGTAGTCA+TGG + chr2_3:1833565-1833584 None:intergenic 50.0%
CATGACTACGACCGACACTA+AGG - chr2_3:1833563-1833582 Msa0270610:CDS 50.0%
TCCAGCGACATCCTTAGTGT+CGG + chr2_3:1833577-1833596 None:intergenic 50.0%
GGTCACTCATCTCCCATACA+TGG - chr2_3:1834288-1834307 Msa0270610:CDS 50.0%
TATGGGAGAGCAATGCGCAT+CGG - chr2_3:1834381-1834400 Msa0270610:intron 50.0%
TGGTGATTCACCTAGGGGAA+TGG - chr2_3:1834446-1834465 Msa0270610:CDS 50.0%
AAAGGACTGACCATTCCCCT+AGG + chr2_3:1834459-1834478 None:intergenic 50.0%
! CTAAGCAATGATGGGACAGG+TGG - chr2_3:1834546-1834565 Msa0270610:intron 50.0%
TGCAAGGATATGCCGGAAGT+TGG - chr2_3:1834585-1834604 Msa0270610:intron 50.0%
AGCAAGCAACCCTGTTGTCA+TGG - chr2_3:1834636-1834655 Msa0270610:CDS 50.0%
CAACCCTGTTGTCATGGTTC+AGG - chr2_3:1834642-1834661 Msa0270610:CDS 50.0%
CCGAAATGTATGTCCAAGGC+TGG - chr2_3:1834683-1834702 Msa0270610:intron 50.0%
!! GTAACGGATAATCCCAGCCT+TGG + chr2_3:1834699-1834718 None:intergenic 50.0%
TTCTCTCACAGAACCACCAG+AGG - chr2_3:1834921-1834940 Msa0270610:intron 50.0%
CAAGGATCTATCTCCTCCTC+TGG + chr2_3:1834940-1834959 None:intergenic 50.0%
GTTCAGCTGCTCTCATTCCA+AGG + chr2_3:1834978-1834997 None:intergenic 50.0%
AGAGCAGCTGAACTCCAGAA+AGG - chr2_3:1834985-1835004 Msa0270610:CDS 50.0%
CTCCTCGCCCTGTATTAAGA+TGG + chr2_3:1835274-1835293 None:intergenic 50.0%
CATCTTAATACAGGGCGAGG+AGG - chr2_3:1835272-1835291 Msa0270610:CDS 50.0%
!! ATTATAGAGGTGCCCTCCAC+CGG - chr2_3:1835298-1835317 Msa0270610:CDS 50.0%
CATGAGAAACTGACCCATCC+CGG + chr2_3:1835320-1835339 None:intergenic 50.0%
! GTGGATTGAGTAGCACCTTG+TGG + chr2_3:1835978-1835997 None:intergenic 50.0%
! GGATGAGCCTTATGAAGACC+TGG - chr2_3:1836096-1836115 Msa0270610:intron 50.0%
TTAGTAGAGTGCACGCAGCA+AGG - chr2_3:1836182-1836201 Msa0270610:CDS 50.0%
GCCTAATCAGCTCGTCTTAC+AGG - chr2_3:1836446-1836465 Msa0270610:CDS 50.0%
CCCTGTAAGACGAGCTGATT+AGG + chr2_3:1836450-1836469 None:intergenic 50.0%
!! ATTGGTGCTGGTTCTCATGC+TGG - chr2_3:1836481-1836500 Msa0270610:intron 50.0%
TTCTCATGCTGGAGCTCTTC+TGG - chr2_3:1836492-1836511 Msa0270610:intron 50.0%
ATGTCTCTTGGTCCATCCTG+TGG - chr2_3:1836735-1836754 Msa0270610:intron 50.0%
TATTACCGAAAACGCCTGGG+AGG + chr2_3:1836819-1836838 None:intergenic 50.0%
TGCATCAGCCATCTCTTTCC+CGG + chr2_3:1837001-1837020 None:intergenic 50.0%
!! GCAGATTTTGGGTATGTGGG+AGG - chr2_3:1837018-1837037 Msa0270610:CDS 50.0%
GATTGACCTCTATGTCGGCA+AGG - chr2_3:1837053-1837072 Msa0270610:CDS 50.0%
AACCCAATTTCCGTTGGGTC+GGG + chr2_3:1837409-1837428 None:intergenic 50.0%
CAACCCAATTTCCGTTGGGT+CGG + chr2_3:1837410-1837429 None:intergenic 50.0%
ACCGACACTAAGGATGTCGC+TGG - chr2_3:1833573-1833592 Msa0270610:CDS 55.0%
TGTCGCTGGAACAGTAGAGC+AGG - chr2_3:1833587-1833606 Msa0270610:CDS 55.0%
ATGGGAGAGCAATGCGCATC+GGG - chr2_3:1834382-1834401 Msa0270610:intron 55.0%
ATGCGCATCGGGACAAACCA+CGG - chr2_3:1834393-1834412 Msa0270610:intron 55.0%
TACGGTCAGAAAGACTGCCG+TGG + chr2_3:1834413-1834432 None:intergenic 55.0%
CACTTGGGAGTTACCGAAGC+TGG - chr2_3:1834718-1834737 Msa0270610:intron 55.0%
GGAGTTACCGAAGCTGGAGA+AGG - chr2_3:1834724-1834743 Msa0270610:intron 55.0%
ATCCTCGCCTTCTCCAGCTT+CGG + chr2_3:1834734-1834753 None:intergenic 55.0%
TCTCACAGAACCACCAGAGG+AGG - chr2_3:1834924-1834943 Msa0270610:intron 55.0%
GGATCTATCTCCTCCTCTGG+TGG + chr2_3:1834937-1834956 None:intergenic 55.0%
! TTTGACTTCCAGCGCCGTTC+TGG - chr2_3:1835143-1835162 Msa0270610:intron 55.0%
CTTAATACAGGGCGAGGAGG+TGG - chr2_3:1835275-1835294 Msa0270610:CDS 55.0%
!! GGCGAGGAGGTGGATTATAG+AGG - chr2_3:1835285-1835304 Msa0270610:CDS 55.0%
!! TTATAGAGGTGCCCTCCACC+GGG - chr2_3:1835299-1835318 Msa0270610:CDS 55.0%
TAGGCTTGGCTGCCAAAGTG+AGG + chr2_3:1835700-1835719 None:intergenic 55.0%
TTCCCTATCAGGCACACGCT+TGG - chr2_3:1836057-1836076 Msa0270610:intron 55.0%
AGCCAAGCGTGTGCCTGATA+GGG + chr2_3:1836062-1836081 None:intergenic 55.0%
GCTTGGCTGTGTCAGTACGT+GGG - chr2_3:1836074-1836093 Msa0270610:intron 55.0%
CTTGGCTGTGTCAGTACGTG+GGG - chr2_3:1836075-1836094 Msa0270610:intron 55.0%
! GCTGGAGCTCTTCTGGTTGA+CGG - chr2_3:1836499-1836518 Msa0270610:intron 55.0%
! CTGGAGCTCTTCTGGTTGAC+GGG - chr2_3:1836500-1836519 Msa0270610:intron 55.0%
GGTGAAGCGTGCAATTGCGA+TGG - chr2_3:1837270-1837289 Msa0270610:intron 55.0%
CGATGGAGCAAGCAACCTGA+TGG - chr2_3:1837287-1837306 Msa0270610:intron 55.0%
TTGGGTAGACCCTCCTGTAG+AGG - chr2_3:1837341-1837360 Msa0270610:intron 55.0%
GTCCCGACCCAACGGAAATT+GGG - chr2_3:1837404-1837423 Msa0270610:intron 55.0%
TACCGAAGCTGGAGAAGGCG+AGG - chr2_3:1834729-1834748 Msa0270610:intron 60.0%
GAAGCTGGAGAAGGCGAGGA+TGG - chr2_3:1834733-1834752 Msa0270610:intron 60.0%
CTGGAGAAGGCGAGGATGGT+AGG - chr2_3:1834737-1834756 Msa0270610:intron 60.0%
GCAATTGACCAGAACGGCGC+TGG + chr2_3:1835154-1835173 None:intergenic 60.0%
AACTGACCCATCCCGGTGGA+GGG + chr2_3:1835313-1835332 None:intergenic 60.0%
AAACTGACCCATCCCGGTGG+AGG + chr2_3:1835314-1835333 None:intergenic 60.0%
GAGAAACTGACCCATCCCGG+TGG + chr2_3:1835317-1835336 None:intergenic 60.0%
CAGCCAAGCGTGTGCCTGAT+AGG + chr2_3:1836063-1836082 None:intergenic 60.0%
CGCTTGGCTGTGTCAGTACG+TGG - chr2_3:1836073-1836092 Msa0270610:intron 60.0%
GTAGAGTGCACGCAGCAAGG+CGG - chr2_3:1836185-1836204 Msa0270610:CDS 60.0%
!! GCTCTTCTGGTTGACGGGCT+TGG - chr2_3:1836505-1836524 Msa0270610:intron 60.0%
!! TGGTTGACGGGCTTGGAGAC+CGG - chr2_3:1836512-1836531 Msa0270610:intron 60.0%
AAAAGCTCGTCGCACCTCCC+AGG - chr2_3:1836802-1836821 Msa0270610:intron 60.0%
! TCGCACCTCCCAGGCGTTTT+CGG - chr2_3:1836811-1836830 Msa0270610:intron 60.0%
!! GGTATGTGGGAGGTGCTCCT+GGG - chr2_3:1837028-1837047 Msa0270610:CDS 60.0%
CCAATGAGGTCCCGACCCAA+CGG - chr2_3:1837396-1837415 Msa0270610:intron 60.0%
GGTCCCGACCCAACGGAAAT+TGG - chr2_3:1837403-1837422 Msa0270610:intron 60.0%
!! GGGTATGTGGGAGGTGCTCC+TGG - chr2_3:1837027-1837046 Msa0270610:CDS 65.0%
CCGTTGGGTCGGGACCTCAT+TGG + chr2_3:1837399-1837418 None:intergenic 65.0%
!! AGAGGTGCCCTCCACCGGGA+TGG - chr2_3:1835303-1835322 Msa0270610:CDS 70.0%
! GAGGTGCCCTCCACCGGGAT+GGG - chr2_3:1835304-1835323 Msa0270610:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 1832123 1837824 1832123 ID=Msa0270610;Name=Msa0270610
chr2_3 mRNA 1832123 1837824 1832123 ID=Msa0270610-mRNA-1;Parent=Msa0270610;Name=Msa0270610-mRNA-1;_AED=0.13;_eAED=0.13;_QI=296|0.68|0.75|1|0.89|0.85|20|518|660
chr2_3 exon 1832123 1832682 1832123 ID=Msa0270610-mRNA-1:exon:921;Parent=Msa0270610-mRNA-1
chr2_3 exon 1832873 1832981 1832873 ID=Msa0270610-mRNA-1:exon:920;Parent=Msa0270610-mRNA-1
chr2_3 exon 1833115 1833216 1833115 ID=Msa0270610-mRNA-1:exon:919;Parent=Msa0270610-mRNA-1
chr2_3 exon 1833414 1833468 1833414 ID=Msa0270610-mRNA-1:exon:918;Parent=Msa0270610-mRNA-1
chr2_3 exon 1833551 1833630 1833551 ID=Msa0270610-mRNA-1:exon:917;Parent=Msa0270610-mRNA-1
chr2_3 exon 1833741 1833879 1833741 ID=Msa0270610-mRNA-1:exon:916;Parent=Msa0270610-mRNA-1
chr2_3 exon 1833966 1834077 1833966 ID=Msa0270610-mRNA-1:exon:915;Parent=Msa0270610-mRNA-1
chr2_3 exon 1834264 1834326 1834264 ID=Msa0270610-mRNA-1:exon:914;Parent=Msa0270610-mRNA-1
chr2_3 exon 1834410 1834469 1834410 ID=Msa0270610-mRNA-1:exon:913;Parent=Msa0270610-mRNA-1
chr2_3 exon 1834591 1834662 1834591 ID=Msa0270610-mRNA-1:exon:912;Parent=Msa0270610-mRNA-1
chr2_3 exon 1834760 1834846 1834760 ID=Msa0270610-mRNA-1:exon:911;Parent=Msa0270610-mRNA-1
chr2_3 exon 1834936 1835029 1834936 ID=Msa0270610-mRNA-1:exon:910;Parent=Msa0270610-mRNA-1
chr2_3 exon 1835153 1835382 1835153 ID=Msa0270610-mRNA-1:exon:909;Parent=Msa0270610-mRNA-1
chr2_3 exon 1835480 1835569 1835480 ID=Msa0270610-mRNA-1:exon:908;Parent=Msa0270610-mRNA-1
chr2_3 exon 1835739 1835815 1835739 ID=Msa0270610-mRNA-1:exon:907;Parent=Msa0270610-mRNA-1
chr2_3 exon 1835938 1836038 1835938 ID=Msa0270610-mRNA-1:exon:906;Parent=Msa0270610-mRNA-1
chr2_3 exon 1836136 1836242 1836136 ID=Msa0270610-mRNA-1:exon:905;Parent=Msa0270610-mRNA-1
chr2_3 exon 1836339 1836494 1836339 ID=Msa0270610-mRNA-1:exon:904;Parent=Msa0270610-mRNA-1
chr2_3 exon 1836899 1837124 1836899 ID=Msa0270610-mRNA-1:exon:903;Parent=Msa0270610-mRNA-1
chr2_3 exon 1837548 1837824 1837548 ID=Msa0270610-mRNA-1:exon:902;Parent=Msa0270610-mRNA-1
chr2_3 five_prime_UTR 1837548 1837824 1837548 ID=Msa0270610-mRNA-1:five_prime_utr;Parent=Msa0270610-mRNA-1
chr2_3 five_prime_UTR 1837106 1837124 1837106 ID=Msa0270610-mRNA-1:five_prime_utr;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1836899 1837105 1836899 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1836339 1836494 1836339 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1836136 1836242 1836136 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1835938 1836038 1835938 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1835739 1835815 1835739 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1835480 1835569 1835480 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1835153 1835382 1835153 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1834936 1835029 1834936 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1834760 1834846 1834760 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1834591 1834662 1834591 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1834410 1834469 1834410 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1834264 1834326 1834264 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1833966 1834077 1833966 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1833741 1833879 1833741 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1833551 1833630 1833551 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1833414 1833468 1833414 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1833115 1833216 1833115 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1832873 1832981 1832873 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 CDS 1832641 1832682 1832641 ID=Msa0270610-mRNA-1:cds;Parent=Msa0270610-mRNA-1
chr2_3 three_prime_UTR 1832123 1832640 1832123 ID=Msa0270610-mRNA-1:three_prime_utr;Parent=Msa0270610-mRNA-1
Gene Sequence

>Msa0270610

ATGGCTGCTGGAACTGTGCCTGCTTCATTTTCCAGCCTCAGGACATGTGATTCTGGTTTGGGGTTTGGGAAAAGTATTGATTTTGTGAGAATTTCTGATTTGCAAAGAATGAAATCTTCAAGGAGGAAGGTGTCAGTTATCAGGAATTCAAATCCTAGTCAGGATATTGCTGAACTTCAACTGCATCCAAAGGAAGTCAACTTTTGGTTCCTAGGCAGAAGTATTGTGAATCACTGCACAAAACTGAGGAGGAAAACAAGGACAGTGAATGTTGGTGATGTGACTATTGGTAGTGACCATCCCATAAGAATTCAGACCATGACTACGACCGACACTAAGGATGTCGCTGGAACAGTAGAGCAGGTGATGAAAATCGCAGATAAAGGAGCTGATATTGTCCGGATAACTGTTCAAGGGAAGAAAGAAGCTGATGCATGTTTTGAGATTAAAAACTCACTTGTGCAGAAAAACTACAACATACCATTGGTGGCTGACATTCATTTTGCTCCAACTGTTGCTTTACGAGTAGCTGAATGCTTTGATAAGATTCGTGTCAACCCTGGAAATTTTGCTGATAGACGAGCTCAGTTTGAAATATTAGAGTACACAGAAGACGACTATCAGAAAGAACTTGAGCATATTGAACAGAAATATGGGAGAGCAATGCGCATCGGGACAAACCACGGCAGTCTTTCTGACCGTATAATGAGCTACTATGGTGATTCACCTAGGGGAATGGTGGAATCTGCTTTTGAATTTGCAAGGATATGCCGGAAGTTGGACTATCACAACTTTGTATTTTCTATGAAAGCAAGCAACCCTGTTGTCATGGTTCAGGCATACCGCTTACTTGTAGCCGAAATGTATGTCCAAGGCTGGGATTATCCGTTACACTTGGGAGTTACCGAAGCTGGAGAAGGCGAGGATGGTAGGATGAAATCTGCAATGGCATTGGAACTCTTCTTCAGAGTTTCTCTCACAGAACCACCAGAGGAGGAGATAGATCCTTGTACAAGGTTGGCAAACCTTGGAATGAGAGCAGCTGAACTCCAGAAAGGAGTTCTTTTCCATCAGGCACCTTTTGAAGAAAAGCACAGACATTACTTTGACTTCCAGCGCCGTTCTGGTCAATTGCCATTGCAAAAAGAGGGCGAGGAGGTGGATTATAGAGGTGCCCTCCACCGGGATGGGTCAGTTTCTCATGTCAGTCTCCTTGGAGCAACACCGGAGCTCCTTTACAAGTCACTTGCTGCAAAACTCATTGTTGGCATGCCATTTAAGGATCTGGCAACAGTAGATTCAATCTTATTGCGGGAACTTCCTCCAGTAGATGATGTTGATGCTTATGGGAGTTATACTCCTTTGTCGGAGCAGCTAACAAAGCCATTACCAAATGCCATAGTTCTGGTAAACCTTAAGGAGCTATCTACTGGAGCTTATAAGCTTTTGCCACAAGGCACACGCTTGGCTGTGTCAGTACGTGGGGATGAGCCTTATGAAGACCTGGAAATTCTCAAAGATGTTGATGCTACTATGCTTCTCCATGACCTGCCTTATACAGAAGACAGAATTAGTAGAGTGCACGCAGCAAGGCGGTTATTCGAGTACCTATCAGACAATTCTCTAGACTTTCCCGTCATTCCCACCACATTCATTTTCCAAATGGGATTCACAGTGATTGGTGCTGGTTCTCATGCTGGAGCTCTTCTGGTTGACGGGCTTGGAGACCGGAGTATGTCTCTTGGTCCATCCTGTGGCAGAACATTATTTGATCTTCAAGAAATAAGTGCAGAAATTAGAGAAAAGCTCGTCGCACCTCCCAGGCGTTTTCGATTGCAATCATGGGTTTTTCATTGTAAATGGTCCGGGAAAGAGATGGCTGATGCAGATTTTGGGTATGTGGGAGGTGCTCCTGGGAAGATTGACCTCTATGTCGGCAAGACTGTGGTGAAGCGTGCAATTGCGATGGAGCAAGCAACCTGA

Protein sequence

>Msa0270610

MAAGTVPASFSSLRTCDSGLGFGKSIDFVRISDLQRMKSSRRKVSVIRNSNPSQDIAELQLHPKEVNFWFLGRSIVNHCTKLRRKTRTVNVGDVTIGSDHPIRIQTMTTTDTKDVAGTVEQVMKIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFEILEYTEDDYQKELEHIEQKYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAMALELFFRVSLTEPPEEEIDPCTRLANLGMRAAELQKGVLFHQAPFEEKHRHYFDFQRRSGQLPLQKEGEEVDYRGALHRDGSVSHVSLLGATPELLYKSLAAKLIVGMPFKDLATVDSILLRELPPVDDVDAYGSYTPLSEQLTKPLPNAIVLVNLKELSTGAYKLLPQGTRLAVSVRGDEPYEDLEILKDVDATMLLHDLPYTEDRISRVHAARRLFEYLSDNSLDFPVIPTTFIFQMGFTVIGAGSHAGALLVDGLGDRSMSLGPSCGRTLFDLQEISAEIREKLVAPPRRFRLQSWVFHCKWSGKEMADADFGYVGGAPGKIDLYVGKTVVKRAIAMEQAT*