AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0814900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0814900 MtrunA17_Chr5g0433051 98.887 539 6 0 1 539 178 716 0.0 1100
Msa0814900 MtrunA17_Chr5g0433071 91.095 539 48 0 1 539 180 718 0.0 1004
Msa0814900 MtrunA17_Chr7g0264631 38.557 402 221 10 135 520 925 1316 1.47e-70 246
Msa0814900 MtrunA17_Chr7g0264631 41.401 314 171 5 214 520 354 661 8.58e-64 226
Msa0814900 MtrunA17_Chr1g0156821 36.131 429 260 8 103 520 803 1228 5.75e-70 244
Msa0814900 MtrunA17_Chr1g0156821 46.091 243 130 1 286 527 370 612 6.58e-54 197
Msa0814900 MtrunA17_Chr3g0123411 36.569 443 262 9 100 527 710 1148 1.25e-69 242
Msa0814900 MtrunA17_Chr3g0123411 40.984 305 167 5 230 527 195 493 1.43e-54 199
Msa0814900 MtrunA17_Chr5g0410921 46.296 270 139 4 262 526 963 1231 1.00e-68 240
Msa0814900 MtrunA17_Chr5g0410921 37.275 389 221 8 136 513 206 582 3.13e-60 215
Msa0814900 MtrunA17_Chr4g0061601 30.588 510 338 8 22 522 121 623 1.13e-68 233
Msa0814900 MtrunA17_Chr3g0128381 42.857 308 153 8 236 525 335 637 3.97e-68 231
Msa0814900 MtrunA17_Chr1g0180601 37.562 402 225 10 135 520 899 1290 7.41e-67 235
Msa0814900 MtrunA17_Chr1g0180601 42.357 314 168 5 214 520 327 634 1.02e-64 229
Msa0814900 MtrunA17_Chr6g0451911 31.712 514 309 12 25 514 748 1243 8.27e-66 232
Msa0814900 MtrunA17_Chr6g0451911 47.162 229 119 1 287 513 359 587 8.16e-59 211
Msa0814900 MtrunA17_Chr4g0041871 35.227 440 253 10 93 512 804 1231 4.00e-65 229
Msa0814900 MtrunA17_Chr4g0041871 35.989 364 202 9 179 520 226 580 8.70e-60 214
Msa0814900 MtrunA17_Chr4g0039821 32.882 517 312 13 15 520 776 1268 8.59e-65 229
Msa0814900 MtrunA17_Chr4g0039821 38.043 368 216 6 161 520 247 610 4.20e-56 203
Msa0814900 MtrunA17_Chr4g0069351 32.271 502 325 10 29 520 774 1270 2.21e-64 228
Msa0814900 MtrunA17_Chr4g0069351 37.666 377 205 11 161 520 249 612 7.74e-58 208
Msa0814900 MtrunA17_Chr6g0481921 32.752 516 307 15 28 520 664 1162 2.86e-64 227
Msa0814900 MtrunA17_Chr6g0481921 42.205 263 146 4 263 520 244 505 2.30e-57 207
Msa0814900 MtrunA17_Chr6g0452061 37.073 410 218 13 134 520 374 766 5.93e-64 223
Msa0814900 MtrunA17_Chr6g0452061 48.696 115 58 1 419 532 14 128 1.78e-23 104
Msa0814900 MtrunA17_Chr6g0453051 36.816 402 226 10 143 528 861 1250 6.21e-64 226
Msa0814900 MtrunA17_Chr6g0453051 44.444 261 142 2 263 520 336 596 8.18e-63 223
Msa0814900 MtrunA17_Chr7g0233901 36.744 430 236 13 105 511 806 1222 7.34e-64 226
Msa0814900 MtrunA17_Chr7g0233901 43.580 257 140 3 269 520 335 591 2.37e-59 213
Msa0814900 MtrunA17_Chr2g0285301 34.308 513 303 15 28 520 758 1256 2.22e-63 224
Msa0814900 MtrunA17_Chr2g0285301 40.441 272 158 3 263 530 337 608 1.37e-56 205
Msa0814900 MtrunA17_Chr6g0452071 35.104 433 243 12 103 512 23 440 2.74e-63 214
Msa0814900 MtrunA17_Chr6g0452111 31.215 535 318 14 26 531 753 1266 5.24e-63 223
Msa0814900 MtrunA17_Chr6g0452111 45.113 266 142 3 270 532 350 614 3.97e-60 215
Msa0814900 MtrunA17_Chr4g0069411 45.802 262 138 3 263 520 1023 1284 6.00e-63 223
Msa0814900 MtrunA17_Chr4g0069411 44.867 263 139 4 263 520 369 630 9.13e-57 205
Msa0814900 MtrunA17_Chr4g0069361 32.816 515 315 12 15 520 778 1270 8.47e-63 223
Msa0814900 MtrunA17_Chr4g0069361 45.570 237 126 2 287 520 376 612 5.31e-56 203
Msa0814900 MtrunA17_Chr6g0452171 32.022 534 317 15 26 530 755 1271 1.12e-62 223
Msa0814900 MtrunA17_Chr6g0452171 47.162 229 119 1 287 513 359 587 4.29e-60 215
Msa0814900 MtrunA17_Chr6g0451881 30.885 531 325 13 25 528 740 1255 1.41e-62 222
Msa0814900 MtrunA17_Chr6g0451881 48.035 229 117 1 287 513 359 587 3.02e-60 215
Msa0814900 MtrunA17_Chr8g0366481 44.280 271 147 3 260 527 358 627 7.34e-62 214
Msa0814900 MtrunA17_Chr2g0285311 45.076 264 140 4 262 520 997 1260 1.79e-61 219
Msa0814900 MtrunA17_Chr2g0285311 43.882 237 130 2 287 520 367 603 9.02e-56 202
Msa0814900 MtrunA17_Chr8g0344651 36.236 356 207 5 180 520 481 831 1.97e-61 219
Msa0814900 MtrunA17_Chr8g0344651 34.772 417 255 8 113 520 1069 1477 1.74e-54 199
Msa0814900 MtrunA17_Chr2g0285191 46.212 264 137 4 262 520 1025 1288 4.81e-61 218
Msa0814900 MtrunA17_Chr2g0285191 43.130 262 145 3 263 520 371 632 9.72e-60 214
Msa0814900 MtrunA17_Chr3g0119381 35.484 403 228 10 146 530 255 643 1.95e-60 216
Msa0814900 MtrunA17_Chr3g0119381 46.414 237 124 2 287 520 1055 1291 2.30e-54 198
Msa0814900 MtrunA17_Chr6g0452041 30.912 537 314 14 26 528 754 1267 6.88e-60 214
Msa0814900 MtrunA17_Chr6g0452041 46.725 229 120 1 287 513 359 587 2.81e-58 209
Msa0814900 MtrunA17_Chr6g0452141 31.157 536 317 14 26 531 752 1265 9.29e-60 214
Msa0814900 MtrunA17_Chr6g0452141 48.230 226 115 1 287 510 360 585 5.92e-59 212
Msa0814900 MtrunA17_Chr1g0194001 44.488 254 137 3 262 511 119 372 1.05e-59 202
Msa0814900 MtrunA17_Chr7g0227391 28.743 501 344 7 28 520 165 660 3.76e-58 205
Msa0814900 MtrunA17_Chr6g0486841 31.078 473 310 8 65 527 776 1242 9.19e-58 208
Msa0814900 MtrunA17_Chr6g0486841 40.684 263 151 3 263 520 331 593 1.96e-53 195
Msa0814900 MtrunA17_Chr1g0193991 42.748 262 146 3 263 520 362 623 2.44e-57 207
Msa0814900 MtrunA17_Chr1g0193991 44.318 264 142 4 262 520 1016 1279 2.03e-56 204
Msa0814900 MtrunA17_Chr4g0069401 46.008 263 138 3 262 520 1006 1268 3.24e-57 206
Msa0814900 MtrunA17_Chr4g0069401 43.511 262 144 3 263 520 346 607 7.49e-57 206
Msa0814900 MtrunA17_Chr1g0194031 41.603 262 149 3 263 520 357 618 5.69e-57 204
Msa0814900 MtrunA17_Chr3g0138211 34.988 403 240 7 137 520 873 1272 9.02e-57 205
Msa0814900 MtrunA17_Chr3g0138211 41.603 262 149 3 263 520 369 630 6.45e-55 200
Msa0814900 MtrunA17_Chr5g0412741 34.043 376 239 4 161 529 328 701 1.81e-56 201
Msa0814900 MtrunA17_Chr1g0178481 32.465 499 308 15 29 511 119 604 1.87e-56 199
Msa0814900 MtrunA17_Chr6g0452081 46.411 209 104 2 287 492 25 228 3.88e-55 185
Msa0814900 MtrunA17_Chr6g0474071 41.250 240 137 2 287 522 211 450 1.47e-53 187
Msa0814900 MtrunA17_Chr1g0212701 39.925 268 157 3 255 520 367 632 2.10e-51 189
Msa0814900 MtrunA17_Chr1g0212701 31.724 435 271 12 103 520 956 1381 2.90e-49 183
Msa0814900 MtrunA17_Chr7g0222781 33.666 401 244 10 133 520 998 1389 6.01e-51 188
Msa0814900 MtrunA17_Chr7g0222781 43.220 236 131 2 287 520 404 638 9.61e-49 182
Msa0814900 MtrunA17_Chr2g0295911 34.717 265 170 3 264 526 1235 1498 4.58e-42 162
Msa0814900 MtrunA17_Chr2g0295911 24.330 448 270 16 120 536 468 877 1.34e-20 96.3
Msa0814900 MtrunA17_Chr2g0295901 34.717 265 170 3 264 526 1232 1495 4.17e-41 159
Msa0814900 MtrunA17_Chr2g0295901 29.204 226 145 3 310 534 664 875 1.60e-18 89.7
Msa0814900 MtrunA17_Chr2g0295921 36.100 241 152 2 287 526 1271 1510 6.65e-41 158
Msa0814900 MtrunA17_Chr2g0295921 30.172 232 139 4 310 536 676 889 2.55e-19 92.4
Msa0814900 MtrunA17_Chr8g0363771 33.585 265 173 3 264 526 1232 1495 1.53e-40 157
Msa0814900 MtrunA17_Chr8g0363771 30.172 232 139 4 310 536 659 872 1.76e-19 92.8
Msa0814900 MtrunA17_Chr8g0376961 35.593 236 149 3 287 520 1196 1430 3.13e-40 156
Msa0814900 MtrunA17_Chr8g0376961 30.244 205 127 4 310 512 610 800 2.79e-16 82.8
Msa0814900 MtrunA17_Chr6g0463131 29.268 369 238 6 157 504 1078 1444 1.86e-39 154
Msa0814900 MtrunA17_Chr6g0463131 28.235 255 153 7 277 520 606 841 2.97e-17 85.9
Msa0814900 MtrunA17_Chr6g0472531 27.725 422 281 7 104 504 976 1394 2.50e-39 154
Msa0814900 MtrunA17_Chr6g0472531 29.183 257 152 7 275 520 554 791 1.69e-20 95.9
Msa0814900 MtrunA17_Chr3g0085281 35.169 236 150 3 287 520 1219 1453 7.10e-39 152
Msa0814900 MtrunA17_Chr3g0085281 30.806 211 129 5 309 516 614 810 2.80e-16 82.8
Msa0814900 MtrunA17_Chr8g0359291 28.065 367 237 9 161 504 263 625 1.59e-38 149
Msa0814900 MtrunA17_Chr6g0463181 28.065 367 237 9 161 504 1065 1427 2.92e-38 150
Msa0814900 MtrunA17_Chr6g0463181 23.383 402 274 9 130 520 449 827 1.27e-17 87.0
Msa0814900 MtrunA17_Chr6g0463141 27.397 365 242 6 161 504 1106 1468 6.23e-38 149
Msa0814900 MtrunA17_Chr6g0463141 24.768 323 191 8 242 530 571 875 2.91e-17 85.9
Msa0814900 MtrunA17_Chr6g0463151 29.255 376 229 9 157 504 895 1261 1.74e-37 148
Msa0814900 MtrunA17_Chr6g0463151 24.816 407 264 12 136 527 286 665 1.32e-20 96.3
Msa0814900 MtrunA17_Chr8g0337191 34.874 238 151 3 277 511 1225 1461 2.65e-37 147
Msa0814900 MtrunA17_Chr8g0337191 30.738 244 150 5 292 531 610 838 6.25e-22 100
Msa0814900 MtrunA17_Chr8g0337121 34.874 238 151 3 277 511 1245 1481 2.67e-37 147
Msa0814900 MtrunA17_Chr8g0337121 30.488 246 152 5 292 533 630 860 2.86e-21 98.6
Msa0814900 MtrunA17_Chr6g0471281 27.830 424 278 10 104 504 1026 1444 1.97e-36 145
Msa0814900 MtrunA17_Chr6g0471281 28.571 252 153 6 287 530 619 851 1.02e-18 90.5
Msa0814900 MtrunA17_Chr7g0262191 38.725 204 116 2 304 503 1300 1498 2.96e-36 144
Msa0814900 MtrunA17_Chr7g0262191 27.143 350 224 7 191 532 545 871 1.04e-23 106
Msa0814900 MtrunA17_Chr6g0463121 28.457 376 232 9 157 504 1077 1443 4.06e-36 144
Msa0814900 MtrunA17_Chr6g0463121 30.275 218 135 4 305 520 638 840 6.85e-20 94.0
Msa0814900 MtrunA17_Chr1g0183191 36.066 244 146 3 265 503 1260 1498 8.19e-36 143
Msa0814900 MtrunA17_Chr1g0183191 22.595 447 314 8 95 532 452 875 2.35e-20 95.5
Msa0814900 MtrunA17_Chr1g0195691 34.902 255 161 4 268 520 1253 1504 1.40e-35 142
Msa0814900 MtrunA17_Chr1g0195691 26.178 382 236 12 147 511 509 861 2.80e-20 95.5
Msa0814900 MtrunA17_Chr6g0463391 28.117 377 244 10 167 520 273 645 3.69e-35 140
Msa0814900 MtrunA17_Chr2g0285731 34.138 290 182 4 234 515 1175 1463 9.09e-35 140
Msa0814900 MtrunA17_Chr2g0285731 29.323 266 159 7 281 532 607 857 3.81e-23 104
Msa0814900 MtrunA17_Chr5g0412941 32.627 236 156 3 287 520 83 317 9.63e-35 133
Msa0814900 MtrunA17_Chr8g0341751 31.599 269 180 4 254 520 1009 1275 2.90e-34 138
Msa0814900 MtrunA17_Chr8g0341751 27.132 258 170 5 266 520 402 644 9.90e-21 96.7
Msa0814900 MtrunA17_Chr3g0080941 34.375 288 180 4 234 513 1173 1459 3.54e-34 138
Msa0814900 MtrunA17_Chr3g0080941 24.277 519 322 19 28 519 372 846 5.65e-21 97.4
Msa0814900 MtrunA17_Chr6g0463211 32.389 247 160 6 278 520 1288 1531 6.53e-34 137
Msa0814900 MtrunA17_Chr6g0463211 24.086 465 302 16 93 535 464 899 7.01e-20 94.0
Msa0814900 MtrunA17_Chr8g0353541 30.916 262 179 2 260 520 799 1059 6.95e-34 137
Msa0814900 MtrunA17_Chr8g0353541 28.413 271 177 4 264 532 185 440 3.27e-24 107
Msa0814900 MtrunA17_Chr8g0341761 32.766 235 156 2 287 520 1203 1436 8.16e-34 137
Msa0814900 MtrunA17_Chr8g0341761 27.817 284 182 6 257 532 560 828 1.86e-23 105
Msa0814900 MtrunA17_Chr5g0412721 32.549 255 168 4 269 520 1225 1478 1.02e-33 137
Msa0814900 MtrunA17_Chr5g0412721 28.383 303 190 8 239 533 569 852 1.15e-19 93.6
Msa0814900 MtrunA17_Chr8g0353781 30.916 262 179 2 260 520 1182 1442 1.45e-33 136
Msa0814900 MtrunA17_Chr8g0353781 27.306 271 180 4 264 532 576 831 3.53e-21 98.2
Msa0814900 MtrunA17_Chr8g0341851 28.996 269 188 3 254 520 1185 1452 1.95e-33 135
Msa0814900 MtrunA17_Chr8g0341851 31.801 261 143 7 285 533 602 839 4.89e-22 100
Msa0814900 MtrunA17_Chr1g0202221 31.169 231 155 3 287 515 1133 1361 2.78e-33 135
Msa0814900 MtrunA17_Chr1g0202221 26.250 240 155 6 287 520 616 839 2.18e-16 83.2
Msa0814900 MtrunA17_Chr5g0445741 32.627 236 156 3 287 520 1249 1483 3.78e-33 135
Msa0814900 MtrunA17_Chr5g0445741 30.603 232 142 5 305 533 648 863 5.08e-19 91.3
Msa0814900 MtrunA17_Chr6g0463201 33.478 230 147 5 278 504 1222 1448 9.87e-33 134
Msa0814900 MtrunA17_Chr6g0463201 28.512 242 153 6 283 520 620 845 5.39e-19 91.3
Msa0814900 MtrunA17_Chr2g0333911 31.325 249 163 4 272 514 752 998 1.17e-32 133
Msa0814900 MtrunA17_Chr2g0333911 26.768 198 129 4 304 499 177 360 3.16e-13 72.8
Msa0814900 MtrunA17_Chr3g0080981 34.100 261 164 3 254 513 1205 1458 4.14e-32 132
Msa0814900 MtrunA17_Chr3g0080981 27.240 279 181 8 264 533 588 853 2.93e-21 98.6
Msa0814900 MtrunA17_Chr5g0445671 32.068 237 158 3 287 521 858 1093 6.05e-32 131
Msa0814900 MtrunA17_Chr5g0445671 30.435 230 145 6 305 533 257 472 3.62e-19 91.7
Msa0814900 MtrunA17_Chr3g0128391 41.401 157 90 1 263 417 230 386 6.25e-32 129
Msa0814900 MtrunA17_Chr3g0128391 52.336 107 51 0 419 525 447 553 3.86e-27 115
Msa0814900 MtrunA17_Chr8g0341811 30.469 256 173 4 267 520 1011 1263 7.03e-32 131
Msa0814900 MtrunA17_Chr8g0341811 26.855 283 188 5 242 520 390 657 2.06e-22 102
Msa0814900 MtrunA17_Chr3g0101441 32.203 236 157 3 287 520 1060 1294 1.06e-31 130
Msa0814900 MtrunA17_Chr3g0101441 26.490 302 197 7 239 533 382 665 1.58e-20 95.9
Msa0814900 MtrunA17_Chr3g0101471 31.780 236 158 3 287 520 1058 1292 2.60e-31 129
Msa0814900 MtrunA17_Chr3g0101471 23.057 386 249 9 162 533 312 663 1.41e-19 93.2
Msa0814900 MtrunA17_Chr6g0484351 31.716 268 175 4 254 520 383 643 3.21e-31 128
Msa0814900 MtrunA17_Chr3g0101481 32.627 236 156 3 287 520 1253 1487 6.17e-31 128
Msa0814900 MtrunA17_Chr3g0101481 30.081 246 151 5 293 534 630 858 2.78e-21 98.6
Msa0814900 MtrunA17_Chr8g0341801 31.489 235 159 2 287 520 185 418 4.57e-30 122
Msa0814900 MtrunA17_Chr3g0101461 31.780 236 158 3 287 520 1060 1294 5.49e-30 125
Msa0814900 MtrunA17_Chr3g0101461 28.139 231 149 4 305 533 450 665 1.44e-18 89.7
Msa0814900 MtrunA17_Chr8g0393151 32.963 270 152 8 263 520 1 253 5.66e-30 118
Msa0814900 MtrunA17_Chr5g0445701 34.574 188 122 1 304 491 12 198 1.81e-29 116
Msa0814900 MtrunA17_Chr8g0366471 50.000 104 52 0 410 513 10 113 2.12e-27 107
Msa0814900 MtrunA17_Chr8g0366451 31.068 309 185 9 122 419 156 447 1.17e-25 109
Msa0814900 MtrunA17_Chr6g0452051 42.963 135 75 1 287 419 280 414 1.68e-25 108
Msa0814900 MtrunA17_Chr5g0412921 31.034 232 141 5 305 533 628 843 7.94e-20 93.6
Msa0814900 MtrunA17_Chr5g0408061 33.040 227 114 8 301 506 62 271 3.22e-19 91.3
Msa0814900 MtrunA17_Chr1g0202431 31.599 269 138 10 295 534 41 292 3.60e-19 91.3
Msa0814900 MtrunA17_Chr1g0198931 33.040 227 127 10 302 516 105 318 1.59e-18 89.4
Msa0814900 MtrunA17_Chr1g0176451 32.870 216 129 9 301 505 20 230 5.56e-18 87.4
Msa0814900 MtrunA17_Chr3g0130211 28.261 230 138 6 285 505 32 243 5.97e-18 84.0
Msa0814900 MtrunA17_Chr2g0285231 50.649 77 38 0 435 511 24 100 1.22e-17 78.6
Msa0814900 MtrunA17_Chr4g0060421 25.424 295 193 10 242 518 76 361 1.58e-17 85.1
Msa0814900 MtrunA17_Chr8g0341791 29.825 171 116 3 364 532 15 183 1.78e-17 84.3
Msa0814900 MtrunA17_Chr8g0359931 31.944 216 129 8 301 505 63 271 2.78e-17 85.1
Msa0814900 MtrunA17_Chr3g0093091 26.512 215 145 6 308 518 641 846 3.10e-17 85.5
Msa0814900 MtrunA17_Chr4g0060471 26.601 203 136 6 320 518 1 194 3.57e-17 82.0
Msa0814900 MtrunA17_Chr2g0318061 31.019 216 131 8 301 505 28 236 7.12e-17 82.4
Msa0814900 MtrunA17_Chr4g0060401 25.085 295 194 10 242 518 554 839 8.06e-17 84.3
Msa0814900 MtrunA17_Chr1g0176441 33.023 215 129 10 301 505 168 377 1.16e-16 83.6
Msa0814900 MtrunA17_Chr4g0060431 25.822 213 145 6 310 518 623 826 1.40e-16 83.6
Msa0814900 MtrunA17_Chr4g0060501 25.943 212 148 5 310 517 638 844 1.74e-16 83.2
Msa0814900 MtrunA17_Chr7g0249091 29.200 250 128 10 289 505 86 319 2.39e-16 80.5
Msa0814900 MtrunA17_Chr7g0267971 32.093 215 131 10 301 505 157 366 2.96e-16 82.0
Msa0814900 MtrunA17_Chr6g0463401 23.575 386 265 10 93 470 434 797 7.07e-16 80.9
Msa0814900 MtrunA17_Chr5g0446901 30.660 212 139 6 302 505 107 318 9.26e-16 80.5
Msa0814900 MtrunA17_Chr5g0411621 28.625 269 157 11 260 505 1 257 1.09e-15 80.5
Msa0814900 MtrunA17_Chr3g0102731 29.412 221 124 6 303 505 97 303 1.46e-15 79.7
Msa0814900 MtrunA17_Chr3g0130331 29.237 236 125 7 302 513 56 273 2.38e-15 79.3
Msa0814900 MtrunA17_Chr1g0200651 28.972 214 139 7 301 505 87 296 2.93e-15 79.0
Msa0814900 MtrunA17_Chr4g0065231 30.000 250 142 11 291 515 56 297 3.52e-15 78.6
Msa0814900 MtrunA17_Chr1g0199471 30.466 279 144 13 262 505 462 725 7.58e-15 77.8
Msa0814900 MtrunA17_Chr8g0384391 28.378 222 142 8 302 513 54 268 2.54e-14 75.9
Msa0814900 MtrunA17_Chr8g0349441 27.189 217 138 4 254 469 12 209 2.88e-14 72.0
Msa0814900 MtrunA17_Chr8g0393191 26.378 254 161 9 286 516 40 290 7.41e-14 74.7
Msa0814900 MtrunA17_Chr6g0484361 27.801 241 142 7 257 484 567 788 1.15e-13 73.9
Msa0814900 MtrunA17_Chr7g0263351 28.571 259 149 10 261 505 98 334 1.07e-12 70.9
Msa0814900 MtrunA17_Chr4g0039261 29.091 220 135 9 302 508 49 260 1.47e-12 70.5
Msa0814900 MtrunA17_Chr3g0124171 27.386 241 155 6 250 483 409 636 3.65e-12 69.3
Msa0814900 MtrunA17_Chr7g0257341 26.271 236 155 8 272 501 543 765 4.27e-12 69.3
Msa0814900 MtrunA17_Chr4g0039251 28.767 219 131 8 302 505 91 299 1.23e-11 67.4
Msa0814900 MtrunA17_Chr6g0477811 28.169 213 140 6 302 505 64 272 3.53e-11 65.9
Msa0814900 MtrunA17_Chr2g0316301 26.957 230 131 7 304 512 73 286 4.25e-11 65.5
Msa0814900 MtrunA17_Chr8g0371961 34.940 83 54 0 304 386 18 100 4.75e-11 60.5
Msa0814900 MtrunA17_Chr4g0050221 27.397 219 133 7 304 505 31 240 5.17e-11 65.5
Msa0814900 MtrunA17_Chr4g0050291 27.313 227 129 8 302 506 48 260 5.39e-11 65.5
Msa0814900 MtrunA17_Chr4g0050261 26.818 220 139 7 302 506 71 283 7.98e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0814900 AT5G58270.1 81.192 537 101 0 1 537 191 727 0.0 920
Msa0814900 AT4G28630.1 76.128 532 124 1 1 529 146 677 0.0 848
Msa0814900 AT4G28620.1 75.752 532 126 1 1 529 148 679 0.0 833
Msa0814900 AT1G10680.1 37.750 400 221 8 141 525 835 1221 2.54e-69 242
Msa0814900 AT1G10680.1 35.240 437 249 12 103 520 174 595 7.04e-62 221
Msa0814900 AT2G36910.1 36.567 402 229 9 135 520 868 1259 5.24e-67 236
Msa0814900 AT2G36910.1 41.401 314 171 5 214 520 296 603 8.73e-64 226
Msa0814900 AT4G25960.1 45.896 268 141 3 262 526 1004 1270 1.19e-65 232
Msa0814900 AT4G25960.1 43.939 264 140 4 263 520 374 635 6.96e-59 212
Msa0814900 AT1G27940.2 33.263 475 299 8 54 520 560 1024 1.90e-65 230
Msa0814900 AT1G27940.2 43.830 235 131 1 287 520 156 390 6.92e-57 206
Msa0814900 AT1G27940.1 33.263 475 299 8 54 520 774 1238 2.83e-65 231
Msa0814900 AT1G27940.1 43.830 235 131 1 287 520 370 604 8.07e-57 206
Msa0814900 AT3G28380.1 32.234 546 316 14 2 524 722 1236 1.62e-64 228
Msa0814900 AT3G28380.1 44.074 270 147 3 255 520 324 593 3.11e-63 224
Msa0814900 AT5G46540.1 37.056 394 228 8 139 520 855 1240 7.84e-64 226
Msa0814900 AT5G46540.1 41.221 262 150 3 263 520 330 591 6.67e-56 203
Msa0814900 AT4G18050.2 36.429 420 250 8 114 520 823 1238 1.18e-63 226
Msa0814900 AT4G18050.2 45.570 237 126 2 287 520 363 599 3.49e-58 210
Msa0814900 AT4G18050.1 36.429 420 250 8 114 520 813 1228 1.36e-63 226
Msa0814900 AT4G18050.1 45.570 237 126 2 287 520 353 589 3.91e-58 209
Msa0814900 AT3G28415.2 44.074 270 147 3 255 520 311 580 2.81e-63 224
Msa0814900 AT3G28415.2 36.432 398 215 11 138 514 833 1213 7.20e-62 221
Msa0814900 AT3G28415.1 44.074 270 147 3 255 520 303 572 3.26e-63 224
Msa0814900 AT3G28415.1 36.500 400 212 11 138 514 825 1205 8.85e-62 220
Msa0814900 AT1G28010.1 31.818 528 319 9 8 520 739 1240 3.88e-63 224
Msa0814900 AT1G28010.1 44.000 250 139 1 277 525 361 610 5.76e-58 209
Msa0814900 AT3G28390.1 50.424 236 113 2 287 518 978 1213 4.28e-63 224
Msa0814900 AT3G28390.1 48.523 237 119 2 287 520 345 581 3.61e-62 221
Msa0814900 AT1G70610.2 29.070 516 340 9 28 528 14 518 8.10e-63 214
Msa0814900 AT3G28345.1 42.908 282 155 3 260 538 333 611 1.17e-62 223
Msa0814900 AT3G28345.1 32.909 471 278 10 65 514 771 1224 9.92e-60 214
Msa0814900 AT1G02520.1 45.038 262 140 3 263 520 354 615 1.91e-62 222
Msa0814900 AT1G02520.1 45.324 278 138 5 249 520 1000 1269 6.61e-61 218
Msa0814900 AT1G02520.2 45.038 262 140 3 263 520 354 615 1.91e-62 222
Msa0814900 AT1G02520.2 45.324 278 138 5 249 520 1000 1269 6.61e-61 218
Msa0814900 AT1G02520.3 45.038 262 140 3 263 520 354 615 1.91e-62 222
Msa0814900 AT1G02520.3 45.324 278 138 5 249 520 1000 1269 6.61e-61 218
Msa0814900 AT1G10680.2 35.240 437 249 12 103 520 174 595 6.31e-62 221
Msa0814900 AT1G10680.2 38.209 335 180 7 141 461 835 1156 9.89e-55 199
Msa0814900 AT3G28860.1 46.800 250 131 1 273 520 349 598 8.63e-62 220
Msa0814900 AT3G28860.1 46.531 245 128 2 287 528 1008 1252 1.40e-61 220
Msa0814900 AT1G70610.1 29.070 516 340 9 28 528 195 699 3.26e-61 214
Msa0814900 AT1G02530.2 43.893 262 143 3 263 520 341 602 8.45e-61 216
Msa0814900 AT3G28360.1 44.788 259 140 2 265 520 321 579 9.88e-61 217
Msa0814900 AT3G28360.1 35.980 403 213 11 144 520 835 1218 6.16e-60 215
Msa0814900 AT1G02530.1 43.893 262 143 3 263 520 341 602 2.15e-60 216
Msa0814900 AT1G02530.1 44.245 278 141 5 249 520 995 1264 2.43e-60 216
Msa0814900 AT3G62150.3 43.494 269 148 3 263 527 376 644 3.22e-60 216
Msa0814900 AT3G62150.3 45.136 257 136 4 268 520 1032 1287 1.32e-58 211
Msa0814900 AT3G62150.2 43.494 269 148 3 263 527 376 644 3.22e-60 216
Msa0814900 AT3G62150.2 45.136 257 136 4 268 520 1032 1287 1.32e-58 211
Msa0814900 AT3G62150.1 43.494 269 148 3 263 527 376 644 3.22e-60 216
Msa0814900 AT3G62150.1 45.136 257 136 4 268 520 1032 1287 1.32e-58 211
Msa0814900 AT5G39040.1 29.320 515 348 8 28 533 136 643 5.68e-60 209
Msa0814900 AT4G01830.2 43.893 262 143 3 263 520 92 353 1.19e-59 213
Msa0814900 AT4G01830.2 44.737 266 139 5 262 520 723 987 6.62e-59 211
Msa0814900 AT4G01830.1 43.893 262 143 3 263 520 326 587 1.21e-59 214
Msa0814900 AT4G01830.1 44.737 266 139 5 262 520 957 1221 6.40e-59 212
Msa0814900 AT2G47000.3 42.748 262 146 3 263 520 357 618 8.59e-59 211
Msa0814900 AT2G47000.7 42.748 262 146 3 263 520 357 618 8.59e-59 211
Msa0814900 AT2G47000.4 42.748 262 146 3 263 520 357 618 1.58e-58 211
Msa0814900 AT2G47000.6 42.748 262 146 3 263 520 357 618 1.64e-58 211
Msa0814900 AT2G47000.6 42.803 264 146 4 262 520 1014 1277 2.55e-57 207
Msa0814900 AT2G47000.5 42.748 262 146 3 263 520 357 618 1.64e-58 211
Msa0814900 AT2G47000.5 42.803 264 146 4 262 520 1014 1277 2.55e-57 207
Msa0814900 AT2G47000.1 42.748 262 146 3 263 520 357 618 1.64e-58 211
Msa0814900 AT2G47000.1 42.803 264 146 4 262 520 1014 1277 2.55e-57 207
Msa0814900 AT2G47000.2 42.748 262 146 3 263 520 357 618 1.84e-58 211
Msa0814900 AT2G47000.2 34.969 163 102 3 262 420 1014 1176 2.35e-21 99.0
Msa0814900 AT4G01820.2 44.275 262 142 3 263 520 321 582 1.84e-58 209
Msa0814900 AT4G01820.1 44.275 262 142 3 263 520 321 582 4.52e-58 209
Msa0814900 AT4G01820.1 43.066 274 143 5 252 520 955 1220 5.08e-55 201
Msa0814900 AT4G25450.3 40.698 258 148 3 271 524 284 540 1.65e-55 196
Msa0814900 AT4G25450.1 40.698 258 148 3 271 524 453 709 5.18e-54 194
Msa0814900 AT3G55320.1 32.874 435 266 13 103 520 968 1393 8.62e-51 188
Msa0814900 AT3G55320.1 40.299 268 156 3 255 520 381 646 1.39e-50 187
Msa0814900 AT5G03910.1 32.321 461 276 10 56 503 176 613 3.03e-50 183
Msa0814900 AT2G39480.2 43.220 236 131 2 287 520 230 464 1.75e-49 184
Msa0814900 AT2G39480.2 41.350 237 136 2 287 520 976 1212 2.76e-48 181
Msa0814900 AT2G39480.1 43.220 236 131 2 287 520 410 644 2.90e-49 184
Msa0814900 AT2G39480.1 41.350 237 136 2 287 520 1156 1392 4.77e-48 180
Msa0814900 AT3G60970.1 37.727 220 135 2 285 503 798 1016 6.88e-39 152
Msa0814900 AT3G60970.1 26.225 408 275 8 109 511 39 425 7.13e-26 113
Msa0814900 AT3G60160.1 37.273 220 136 2 285 503 1251 1469 3.34e-38 150
Msa0814900 AT3G60160.1 26.464 427 290 7 109 531 455 861 9.14e-23 103
Msa0814900 AT3G60160.3 37.273 220 136 2 285 503 1215 1433 3.37e-38 150
Msa0814900 AT3G60160.3 26.464 427 290 7 109 531 419 825 9.82e-23 103
Msa0814900 AT1G04120.1 37.156 218 135 2 287 503 1266 1482 1.25e-36 146
Msa0814900 AT1G04120.1 25.537 419 273 10 127 532 462 854 1.44e-24 109
Msa0814900 AT3G62700.1 34.646 254 163 3 268 520 1277 1528 1.26e-36 146
Msa0814900 AT3G62700.1 23.133 415 272 12 134 532 488 871 6.02e-20 94.7
Msa0814900 AT1G04120.3 37.156 218 135 2 287 503 1231 1447 1.33e-36 145
Msa0814900 AT1G04120.3 29.021 286 176 6 255 532 553 819 1.22e-23 106
Msa0814900 AT3G21250.4 32.593 270 178 3 253 520 1185 1452 7.50e-36 143
Msa0814900 AT3G21250.4 26.727 333 225 5 206 534 521 838 2.27e-23 105
Msa0814900 AT3G21250.2 32.593 270 178 3 253 520 1179 1446 7.63e-36 143
Msa0814900 AT3G21250.2 26.727 333 225 5 206 534 515 832 2.15e-23 105
Msa0814900 AT3G21250.1 32.593 270 178 3 253 520 1168 1435 7.67e-36 143
Msa0814900 AT3G21250.1 26.126 333 216 6 206 534 515 821 1.34e-19 93.6
Msa0814900 AT3G21250.5 32.593 270 178 3 253 520 1174 1441 7.69e-36 143
Msa0814900 AT3G21250.5 26.126 333 216 6 206 534 521 827 1.48e-19 93.6
Msa0814900 AT3G21250.6 32.593 270 178 3 253 520 763 1030 8.88e-36 143
Msa0814900 AT3G21250.6 26.727 333 225 5 206 534 99 416 1.60e-23 105
Msa0814900 AT3G21250.3 32.593 270 178 3 253 520 763 1030 8.88e-36 143
Msa0814900 AT3G21250.3 26.727 333 225 5 206 534 99 416 1.60e-23 105
Msa0814900 AT2G34660.1 35.573 253 159 3 265 515 1218 1468 2.75e-35 142
Msa0814900 AT2G34660.1 28.472 288 182 7 239 520 566 835 5.36e-26 113
Msa0814900 AT2G34660.2 35.573 253 159 3 265 515 1218 1468 2.75e-35 142
Msa0814900 AT2G34660.2 28.472 288 182 7 239 520 566 835 5.36e-26 113
Msa0814900 AT2G34660.3 35.573 253 159 3 265 515 931 1181 2.97e-35 142
Msa0814900 AT2G34660.3 28.472 288 182 7 239 520 279 548 3.82e-26 114
Msa0814900 AT1G04120.2 36.607 224 123 4 287 503 1266 1477 8.78e-34 137
Msa0814900 AT1G04120.2 25.537 419 273 10 127 532 462 854 1.43e-24 109
Msa0814900 AT1G30410.5 34.375 288 175 7 234 510 1058 1342 2.22e-33 136
Msa0814900 AT1G30410.5 30.147 272 168 7 239 505 452 706 1.57e-23 105
Msa0814900 AT2G47800.1 33.205 259 170 3 264 520 1248 1505 2.62e-33 135
Msa0814900 AT2G47800.1 23.704 405 265 11 144 532 497 873 1.17e-20 97.1
Msa0814900 AT1G30410.1 34.375 288 175 7 234 510 1176 1460 2.71e-33 135
Msa0814900 AT1G30410.1 30.147 272 168 7 239 505 570 824 2.08e-23 105
Msa0814900 AT1G30410.2 34.375 288 175 7 234 510 1173 1457 2.76e-33 135
Msa0814900 AT1G30410.2 30.147 272 168 7 239 505 567 821 1.93e-23 105
Msa0814900 AT1G30410.6 34.375 288 175 7 234 510 1173 1457 2.76e-33 135
Msa0814900 AT1G30410.6 30.147 272 168 7 239 505 567 821 1.93e-23 105
Msa0814900 AT1G30410.4 34.375 288 175 7 234 510 1173 1457 2.76e-33 135
Msa0814900 AT1G30410.4 30.147 272 168 7 239 505 567 821 1.93e-23 105
Msa0814900 AT1G30400.2 35.458 251 160 2 265 514 1213 1462 4.44e-33 135
Msa0814900 AT1G30400.2 26.433 314 196 9 239 536 566 860 1.34e-24 109
Msa0814900 AT1G30400.1 35.458 251 160 2 265 514 1213 1462 4.44e-33 135
Msa0814900 AT1G30400.1 26.433 314 196 9 239 536 566 860 1.34e-24 109
Msa0814900 AT1G30420.1 36.555 238 146 4 277 510 1221 1457 5.82e-33 135
Msa0814900 AT1G30420.1 28.839 267 172 6 242 505 570 821 7.81e-24 107
Msa0814900 AT3G59140.1 25.543 368 253 6 157 504 1056 1422 1.61e-32 133
Msa0814900 AT3G59140.1 22.500 440 305 10 93 520 407 822 6.40e-20 94.7
Msa0814900 AT3G13080.1 31.707 246 162 4 277 520 1260 1501 2.53e-32 133
Msa0814900 AT3G13080.1 28.070 171 115 4 368 534 708 874 2.78e-13 73.6
Msa0814900 AT3G13090.1 31.707 246 162 4 277 520 1210 1451 7.03e-32 131
Msa0814900 AT3G13090.1 23.659 410 278 10 136 534 450 835 1.46e-15 80.9
Msa0814900 AT3G13080.5 33.036 224 145 3 277 499 1260 1479 8.23e-32 131
Msa0814900 AT3G13080.5 28.070 171 115 4 368 534 708 874 2.83e-13 73.6
Msa0814900 AT3G13100.2 31.301 246 163 4 277 520 987 1228 5.83e-31 129
Msa0814900 AT3G13100.2 27.575 301 195 8 239 533 329 612 6.21e-19 91.7
Msa0814900 AT3G13100.1 31.301 246 163 4 277 520 1232 1473 6.19e-31 129
Msa0814900 AT3G13100.1 27.575 301 195 8 239 533 574 857 6.48e-19 91.7
Msa0814900 AT2G07680.5 30.314 287 190 6 234 513 1114 1397 2.70e-29 124
Msa0814900 AT2G07680.5 30.000 200 124 3 308 505 588 773 6.61e-16 82.0
Msa0814900 AT2G07680.4 30.314 287 190 6 234 513 1105 1388 2.71e-29 123
Msa0814900 AT2G07680.4 30.000 200 124 3 308 505 579 764 6.84e-16 82.0
Msa0814900 AT2G07680.1 30.314 287 190 6 234 513 1108 1391 2.72e-29 123
Msa0814900 AT2G07680.1 30.000 200 124 3 308 505 582 767 6.84e-16 82.0
Msa0814900 AT2G07680.6 30.314 287 190 6 234 513 1031 1314 2.72e-29 123
Msa0814900 AT2G07680.6 30.000 200 124 3 308 505 505 690 6.44e-16 82.0
Msa0814900 AT2G07680.3 30.314 287 190 6 234 513 1130 1413 3.22e-29 123
Msa0814900 AT2G07680.3 30.000 200 124 3 308 505 604 789 6.35e-16 82.0
Msa0814900 AT1G67940.1 33.617 235 123 8 303 520 43 261 4.09e-29 116
Msa0814900 AT4G25450.2 37.349 166 99 3 271 432 453 617 4.42e-26 112
Msa0814900 AT3G13080.2 29.675 246 142 5 277 520 1260 1476 1.95e-24 108
Msa0814900 AT3G13080.2 28.235 170 114 4 368 533 708 873 2.52e-13 73.6
Msa0814900 AT1G30420.2 28.839 267 172 6 242 505 570 821 1.10e-23 106
Msa0814900 AT1G30410.3 30.147 272 168 7 239 505 567 821 1.81e-23 105
Msa0814900 AT1G30410.3 32.275 189 115 6 234 412 1173 1358 2.80e-17 86.3
Msa0814900 AT3G60160.2 26.464 427 290 7 109 531 455 861 1.03e-22 103
Msa0814900 AT3G60160.2 38.596 114 68 2 285 397 1251 1363 3.65e-17 85.9
Msa0814900 AT5G39040.2 23.706 367 265 7 28 386 136 495 1.33e-19 92.4
Msa0814900 AT1G31770.1 31.163 215 132 7 301 505 78 286 1.77e-17 86.3
Msa0814900 AT3G47780.1 27.189 217 143 7 307 518 636 842 1.99e-17 86.7
Msa0814900 AT3G47750.1 26.512 215 149 5 307 517 638 847 3.12e-17 85.9
Msa0814900 AT4G25750.1 30.769 221 124 6 304 510 30 235 3.34e-17 85.1
Msa0814900 AT3G25620.2 29.437 231 140 9 302 522 97 314 5.19e-17 84.7
Msa0814900 AT5G52860.1 33.333 213 118 7 304 505 44 243 6.20e-17 84.3
Msa0814900 AT4G33460.1 26.316 228 139 8 289 505 40 249 6.56e-17 81.6
Msa0814900 AT3G47760.2 26.906 223 150 7 301 517 601 816 6.72e-17 84.7
Msa0814900 AT3G47760.3 26.906 223 150 7 301 517 631 846 7.15e-17 84.7
Msa0814900 AT3G47760.1 26.577 222 152 6 301 517 591 806 7.16e-17 84.7
Msa0814900 AT5G19410.1 27.823 248 159 7 304 537 66 307 1.15e-16 83.6
Msa0814900 AT5G19410.2 27.823 248 159 7 304 537 75 316 1.27e-16 83.6
Msa0814900 AT3G47770.2 27.273 264 168 10 269 518 586 839 1.38e-16 84.0
Msa0814900 AT3G25620.1 29.437 231 140 9 302 522 97 314 1.38e-16 82.8
Msa0814900 AT3G47770.1 27.273 264 168 10 269 518 560 813 1.63e-16 83.6
Msa0814900 AT5G61740.1 25.455 275 175 10 257 518 559 816 2.25e-16 83.2
Msa0814900 AT5G61740.2 25.455 275 175 10 257 518 525 782 2.28e-16 83.2
Msa0814900 AT5G61740.3 25.714 280 168 11 257 518 420 677 2.51e-16 82.8
Msa0814900 AT5G06530.2 32.558 215 130 9 301 505 176 385 5.41e-16 81.6
Msa0814900 AT5G06530.1 32.558 215 130 9 301 505 176 385 5.41e-16 81.6
Msa0814900 AT2G07680.2 30.000 200 124 3 308 505 604 789 5.84e-16 82.0
Msa0814900 AT5G06530.3 32.558 215 130 9 301 505 176 385 7.93e-16 81.3
Msa0814900 AT3G47740.1 25.676 222 150 7 302 518 628 839 8.51e-16 81.3
Msa0814900 AT3G47790.1 25.926 216 149 6 307 517 609 818 1.83e-15 80.1
Msa0814900 AT2G13610.1 28.972 214 135 8 302 505 60 266 1.61e-14 77.0
Msa0814900 AT4G27420.1 29.954 217 135 9 301 505 63 274 2.42e-14 76.3
Msa0814900 AT3G13220.1 30.660 212 135 7 302 505 104 311 2.75e-14 76.3
Msa0814900 AT2G37360.1 29.864 221 137 9 297 505 126 340 1.06e-13 74.7
Msa0814900 AT1G53270.1 27.848 237 150 8 283 505 27 256 1.18e-13 73.9
Msa0814900 AT1G65410.1 27.126 247 137 11 289 505 85 318 1.31e-13 72.8
Msa0814900 AT1G71960.1 29.717 212 135 8 301 502 80 287 1.48e-13 73.9
Msa0814900 AT3G13080.3 28.070 171 115 4 368 534 708 874 1.59e-13 74.3
Msa0814900 AT3G13080.4 28.070 171 115 4 368 534 708 874 1.59e-13 74.3
Msa0814900 AT1G71330.1 29.688 128 87 2 408 534 21 146 3.30e-13 71.2
Msa0814900 AT1G51500.1 30.531 226 133 9 295 505 35 251 5.77e-13 72.0
Msa0814900 AT3G53510.1 29.412 221 134 9 299 505 121 333 7.58e-13 71.6
Msa0814900 AT1G17840.1 28.169 213 140 6 302 505 67 275 5.39e-12 68.9
Msa0814900 AT3G55090.1 27.600 250 160 9 297 532 100 342 8.92e-12 68.6
Msa0814900 AT5G06530.4 31.282 195 119 9 321 505 1 190 9.69e-12 67.8
Msa0814900 AT2G39350.1 27.650 217 137 8 302 505 107 316 3.65e-11 66.2
Msa0814900 AT3G55130.1 28.372 215 139 7 302 505 97 307 4.15e-11 66.2
Msa0814900 AT3G21090.1 29.333 225 136 9 295 505 36 251 7.10e-11 65.5
Msa0814900 AT3G55100.1 27.830 212 137 8 302 502 49 255 7.10e-11 65.5
Msa0814900 AT3G55100.2 27.830 212 137 8 302 502 49 255 7.10e-11 65.5
Msa0814900 AT2G41700.1 25.778 225 154 6 283 501 543 760 7.72e-11 65.9
Msa0814900 AT2G41700.2 25.778 225 154 6 283 501 473 690 9.15e-11 65.5

Find 129 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCATGGATTGCTGCTTTC+CGG 0.169477 5_3:+47481328 None:intergenic
TAAATTCATACATAATTTAT+TGG 0.185031 5_3:-47479851 Msa0814900:three_prime_UTR
AATATGCAGGTGATGGTAAA+TGG 0.199922 5_3:-47485355 Msa0814900:intron
GAACCAATTACTTACTCTTT+AGG 0.235839 5_3:+47485931 None:intergenic
CAATATTCAGATCATTGTTT+TGG 0.251745 5_3:-47480188 Msa0814900:intron
TAAAATGTACATTCTCAAAT+TGG 0.252189 5_3:+47483447 None:intergenic
GCAAAGCCTCTAAGGTTTAA+TGG 0.262886 5_3:-47483479 Msa0814900:CDS
TCTTTATGCTCCCACTTTGA+TGG 0.274213 5_3:+47480054 None:intergenic
CTGTCAGTTGCTGCATATAT+TGG 0.275745 5_3:-47486444 Msa0814900:CDS
GGTATACTGGCCTACAAATA+TGG 0.304468 5_3:-47486492 Msa0814900:CDS
ATGGCAGTGTTGATTGGATA+TGG 0.306041 5_3:-47487713 Msa0814900:CDS
GTCATGGATTGCTGCTTTCC+GGG 0.308116 5_3:+47481329 None:intergenic
AAGAAAATGCAAAGCCTCTA+AGG 0.319198 5_3:-47483487 Msa0814900:CDS
AGTTTCACATTCTTTATCAT+TGG 0.321818 5_3:-47479909 Msa0814900:three_prime_UTR
GTCATTATCAGCCTTATTCA+TGG 0.325503 5_3:+47486157 None:intergenic
CAAAGCCTCTAAGGTTTAAT+GGG 0.325662 5_3:-47483478 Msa0814900:CDS
TTCAGTGGAGGACTAAATTC+AGG 0.326820 5_3:-47486184 Msa0814900:intron
CACAATGACTGTTGGTGATT+TGG 0.329778 5_3:-47485623 Msa0814900:intron
AGGAAGATATGCACAGCTTT+GGG 0.333688 5_3:-47480113 Msa0814900:CDS
GGATATGGGATTGCACGTTC+TGG 0.341254 5_3:-47487698 Msa0814900:CDS
CTGATAATGACGCTAGTACT+AGG 0.342140 5_3:-47486145 Msa0814900:CDS
ACTGAGGCATACCTCTAATA+TGG 0.351079 5_3:+47486708 None:intergenic
ATGTATCCCTTGAGAGTTTA+CGG 0.355828 5_3:-47481653 Msa0814900:CDS
AGATAGATGATCAAGATATT+CGG 0.357328 5_3:-47481677 Msa0814900:CDS
TATTCAAGCTTGGAGTTGAT+TGG 0.357739 5_3:-47487808 Msa0814900:five_prime_UTR
ATTCAGGAAAGCCATGAATA+AGG 0.357979 5_3:-47486168 Msa0814900:CDS
ACATGGCTTTCATGTCGATT+AGG 0.378610 5_3:+47485266 None:intergenic
ATCCAGATATCTATGGTATC+AGG 0.379838 5_3:-47486513 Msa0814900:intron
CTTGTTATTTAGAAGTGCTT+TGG 0.385533 5_3:+47479718 None:intergenic
GATAGATGATCAAGATATTC+GGG 0.387294 5_3:-47481676 Msa0814900:CDS
GTCCCTTTCTTATTCAAGCT+TGG 0.390085 5_3:-47487818 Msa0814900:five_prime_UTR
CAGAATACTTACAGTATTGC+AGG 0.395874 5_3:+47480831 None:intergenic
TCTCTTCCACTCTATTTCCT+TGG 0.399272 5_3:-47485316 Msa0814900:CDS
ATCTATGGTATCAGGTATAC+TGG 0.401321 5_3:-47486505 Msa0814900:CDS
TTGACTATTGTTGTTGGTAA+TGG 0.402873 5_3:-47487899 Msa0814900:five_prime_UTR
CTTCCACTCTATTTCCTTGG+TGG 0.407177 5_3:-47485313 Msa0814900:CDS
ACAGAAAGAAAGATACTAGA+TGG 0.408317 5_3:-47482652 Msa0814900:CDS
CATATCGATCCAGATATCTA+TGG 0.408701 5_3:-47486520 Msa0814900:intron
CAGGAAGATATGCACAGCTT+TGG 0.409037 5_3:-47480114 Msa0814900:CDS
TTGACCTTCGATATCATCTA+AGG 0.409081 5_3:-47487092 Msa0814900:intron
CATAGTACCTACCATATTAG+AGG 0.409705 5_3:-47486719 Msa0814900:intron
CATTTCTTACACTTCCAGAA+TGG 0.414448 5_3:+47482013 None:intergenic
TGATTCACTTATTAATTATG+AGG 0.415165 5_3:-47486117 Msa0814900:intron
GTTTCACATTCTTTATCATT+GGG 0.416978 5_3:-47479908 Msa0814900:three_prime_UTR
GAGAGTTTACGGAAGTCTAT+TGG 0.418543 5_3:-47481642 Msa0814900:CDS
ATTTCTTACACTTCCAGAAT+GGG 0.419330 5_3:+47482014 None:intergenic
TTCCTTGCTCTTCAAGAAAG+AGG 0.421148 5_3:-47480017 Msa0814900:three_prime_UTR
ATATTTCATAACATTCACTA+TGG 0.428886 5_3:-47481493 Msa0814900:CDS
GAGCCTGTGAGCAATGAAAA+TGG 0.429900 5_3:+47480557 None:intergenic
GGTAAAAGTGTTGCAATTGT+TGG 0.434197 5_3:-47482607 Msa0814900:CDS
AATAGAGTGGAAGAGATAGT+TGG 0.442703 5_3:+47485323 None:intergenic
GGACAATTCGTTTAGTTTCA+AGG 0.447929 5_3:-47487341 Msa0814900:CDS
AGTCTTGCTTTGTTGAACTT+TGG 0.448486 5_3:-47485715 Msa0814900:CDS
ACTCCAAGCTTGAATAAGAA+AGG 0.455100 5_3:+47487815 None:intergenic
GGATTATTGACTATTGTTGT+TGG 0.456457 5_3:-47487905 Msa0814900:five_prime_UTR
TCTGGAGCTTCTGCTTTCAA+TGG 0.464823 5_3:-47487680 Msa0814900:intron
CAATATATGCAGCAACTGAC+AGG 0.468437 5_3:+47486445 None:intergenic
ATATGCAGGTGATGGTAAAT+GGG 0.470801 5_3:-47485354 Msa0814900:intron
CATAATTTATTGGTGTTCAA+AGG 0.474740 5_3:-47479841 Msa0814900:three_prime_UTR
TTCATAACATTCACTATGGC+CGG 0.475062 5_3:-47481489 Msa0814900:CDS
TATCCAATCAACACTGCCAT+GGG 0.493620 5_3:+47487716 None:intergenic
GTAAAAGTGTTGCAATTGTT+GGG 0.502684 5_3:-47482606 Msa0814900:CDS
TGTTCTCATGGGATCATGAA+TGG 0.503318 5_3:-47485646 Msa0814900:CDS
CGAACAATTGATCGTGGTAG+CGG 0.506493 5_3:-47486778 Msa0814900:CDS
TACTGCTCTTTCAACAGCAA+TGG 0.507400 5_3:-47485674 Msa0814900:CDS
TGGCAGTGTTGATTGGATAT+GGG 0.515347 5_3:-47487712 Msa0814900:CDS
AAAAGGTGCTCCATATTTGT+AGG 0.520423 5_3:+47486482 None:intergenic
TGCTTCGAATCCTACTATGA+TGG 0.521863 5_3:-47487753 Msa0814900:exon
TTCCTCTTTCTTGAAGAGCA+AGG 0.523375 5_3:+47480015 None:intergenic
GTTGCAATTGTTGGGACTAG+TGG 0.533303 5_3:-47482598 Msa0814900:CDS
TGATAATGACGCTAGTACTA+GGG 0.535198 5_3:-47486144 Msa0814900:CDS
TGTTTACTTACAGTATCTTG+TGG 0.535732 5_3:+47481612 None:intergenic
ATCTGAATAGCATTCTGAGA+AGG 0.535884 5_3:+47482046 None:intergenic
AGGGAAGTAATCCATGCAAA+AGG 0.535939 5_3:+47486465 None:intergenic
AACTATTTAACATTCTGTTG+TGG 0.541277 5_3:-47487926 Msa0814900:five_prime_UTR
TGTGGGAGAACGAGGGCTAA+AGG 0.544014 5_3:-47481271 Msa0814900:intron
TCTGAATAGCATTCTGAGAA+GGG 0.544820 5_3:+47482047 None:intergenic
TAGACTTCCGTAAACTCTCA+AGG 0.546719 5_3:+47481646 None:intergenic
TCCACTGTTGTGGGAGAACG+AGG 0.546737 5_3:-47481279 Msa0814900:CDS
GAAGTTGAGTCGTCTTTCCG+TGG 0.546866 5_3:-47479796 Msa0814900:three_prime_UTR
CTCCAAGCTTGAATAAGAAA+GGG 0.548586 5_3:+47487816 None:intergenic
CCTCTTCTGTTGCTGAAAGC+CGG 0.558551 5_3:+47481470 None:intergenic
ATATCACTAGTTGTGCCAGC+TGG 0.564123 5_3:-47482628 Msa0814900:CDS
AGCCATGTTTCAGTTACTTG+AGG 0.564217 5_3:-47485251 Msa0814900:intron
GATTGGTTGAATACTGCCAC+GGG 0.569944 5_3:-47487791 Msa0814900:five_prime_UTR
AATTCGTTTAGTTTCAAGGA+AGG 0.573258 5_3:-47487337 Msa0814900:intron
TACAGGTCTATGAAGCCGCC+CGG 0.575555 5_3:-47481347 Msa0814900:intron
GAAGTGCTCTTAGCAAATGC+AGG 0.576844 5_3:-47480133 Msa0814900:CDS
TGATTGGTTGAATACTGCCA+CGG 0.594998 5_3:-47487792 Msa0814900:five_prime_UTR
AGACTTCCGTAAACTCTCAA+GGG 0.595043 5_3:+47481647 None:intergenic
ATACAAAATCTTGCTGTCCA+CGG 0.596137 5_3:+47479779 None:intergenic
ATATCCAATCAACACTGCCA+TGG 0.596395 5_3:+47487715 None:intergenic
TTTCTTACACTTCCAGAATG+GGG 0.596447 5_3:+47482015 None:intergenic
AGTCTAGCACTCAATATACA+AGG 0.598470 5_3:+47479687 None:intergenic
GGAAGATATGCACAGCTTTG+GGG 0.602281 5_3:-47480112 Msa0814900:CDS
CTAGTATCTTTCTTTCTGTG+AGG 0.603754 5_3:+47482656 None:intergenic
GACACTGTATCAAGAAACAA+TGG 0.604201 5_3:+47479955 None:intergenic
GAAAACTCGTGATAGTGTCA+TGG 0.607580 5_3:+47481313 None:intergenic
GCAAAATAAGCAGTATACAC+TGG 0.614320 5_3:+47479662 None:intergenic
ATTGTTGGGACTAGTGGAAG+TGG 0.622893 5_3:-47482592 Msa0814900:intron
AGGCATACCTCTAATATGGT+AGG 0.623046 5_3:+47486712 None:intergenic
ATGAATGGCACAATGACTGT+TGG 0.624773 5_3:-47485631 Msa0814900:CDS
AATGGAAAGATGGTTGAGCA+TGG 0.626094 5_3:-47480163 Msa0814900:CDS
CCCTCGTTCTCCCACAACAG+TGG 0.627489 5_3:+47481278 None:intergenic
AATGGCTAAGTCACTTGTGA+TGG 0.628794 5_3:-47487881 Msa0814900:five_prime_UTR
TTAGATGATATCGAAGGTCA+AGG 0.630784 5_3:+47487094 None:intergenic
ATTGATACAGCCATCAAAGT+GGG 0.631411 5_3:-47480064 Msa0814900:CDS
CCGGCTTTCAGCAACAGAAG+AGG 0.632017 5_3:-47481470 Msa0814900:CDS
AAGAGCAGTACTAAATATAG+CGG 0.639907 5_3:+47485687 None:intergenic
AAAGCCTCTAAGGTTTAATG+GGG 0.645999 5_3:-47483477 Msa0814900:CDS
CTCATCACACTGCATTGCAG+TGG 0.646215 5_3:+47480533 None:intergenic
AACTGATTGTGGCAGAACTG+CGG 0.647147 5_3:-47487392 Msa0814900:intron
ACACCACCAAGGAAATAGAG+TGG 0.647574 5_3:+47485310 None:intergenic
AATATATGCAGCAACTGACA+GGG 0.647725 5_3:+47486446 None:intergenic
TACCTCAAGTAACTGAAACA+TGG 0.647937 5_3:+47485249 None:intergenic
TCCAATCAACACTGCCATGG+GGG 0.650176 5_3:+47487718 None:intergenic
GCTTTCAGCAACAGAAGAGG+AGG 0.661756 5_3:-47481467 Msa0814900:intron
TTTGCTAAGAGCACTTCATG+TGG 0.665476 5_3:+47480139 None:intergenic
CACTGCAATGCAGTGTGATG+AGG 0.671303 5_3:-47480532 Msa0814900:intron
ATCCAATCAACACTGCCATG+GGG 0.677898 5_3:+47487717 None:intergenic
CATACCTTAGATGATATCGA+AGG 0.682222 5_3:+47487088 None:intergenic
CCACTGTTGTGGGAGAACGA+GGG 0.687524 5_3:-47481278 Msa0814900:CDS
TTAAGTCGAACAATTGATCG+TGG 0.689325 5_3:-47486784 Msa0814900:CDS
AATTGATACAGCCATCAAAG+TGG 0.690779 5_3:-47480065 Msa0814900:CDS
TACTATGTTGAACAACGTAG+AGG 0.691074 5_3:+47486735 None:intergenic
ATGGATTGCTGCTTTCCGGG+CGG 0.692123 5_3:+47481332 None:intergenic
AACAACACTAGCATTGCCCG+TGG 0.713368 5_3:+47487775 None:intergenic
AAGCCTCTAAGGTTTAATGG+GGG 0.730399 5_3:-47483476 Msa0814900:CDS
TTGCACGATAAACACCACCA+AGG 0.767423 5_3:+47485299 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGAAAATATTATATACT+CGG + chr5_3:47483874-47483893 None:intergenic 10.0%
!!! TTTAATTTTAAGATTGTTAT+GGG - chr5_3:47484265-47484284 Msa0814900:intron 10.0%
!! AAATTCTAATGAAAAATAAA+GGG + chr5_3:47485172-47485191 None:intergenic 10.0%
!! AAAATTCTAATGAAAAATAA+AGG + chr5_3:47485173-47485192 None:intergenic 10.0%
!! TAAATTCATACATAATTTAT+TGG - chr5_3:47487708-47487727 Msa0814900:CDS 10.0%
!! AATGGTATTTATAAATGAAA+TGG - chr5_3:47479897-47479916 Msa0814900:three_prime_UTR 15.0%
!! AAATACTGAAGAAAAAAAAA+AGG - chr5_3:47480607-47480626 Msa0814900:CDS 15.0%
!! ACAAATACATTAAATCAAAA+AGG + chr5_3:47482103-47482122 None:intergenic 15.0%
!!! TAACTTTTTAAAGTTTAATG+TGG + chr5_3:47482340-47482359 None:intergenic 15.0%
!!! GAATTTTGAAATAATTAGTT+TGG - chr5_3:47482522-47482541 Msa0814900:intron 15.0%
!! TTTCATATCATTTCAAAATT+TGG - chr5_3:47483159-47483178 Msa0814900:intron 15.0%
!! ATTGAATTATTTAACTGAAT+TGG - chr5_3:47483526-47483545 Msa0814900:intron 15.0%
!! ATATATTGAACATATAAACT+TGG + chr5_3:47483563-47483582 None:intergenic 15.0%
!! TGTTCAATATATTAATTAGT+TGG - chr5_3:47483571-47483590 Msa0814900:intron 15.0%
!!! GTTTAATTTTAAGATTGTTA+TGG - chr5_3:47484264-47484283 Msa0814900:intron 15.0%
!! GTTAATTCTTATTGAAATTA+TGG + chr5_3:47484483-47484502 None:intergenic 15.0%
!! AGTACATAAATATAAATACA+AGG + chr5_3:47484570-47484589 None:intergenic 15.0%
!! ACAGTTATATTTGTATTATA+AGG + chr5_3:47484716-47484735 None:intergenic 15.0%
!!! TTTTCATTAGAATTTTTTTG+AGG - chr5_3:47485177-47485196 Msa0814900:intron 15.0%
!!! ATTAATTATTTTATGCTTAC+AGG - chr5_3:47486195-47486214 Msa0814900:intron 15.0%
!! TTATTTACAGTATTACATTA+GGG + chr5_3:47486601-47486620 None:intergenic 15.0%
!! TTTATTTACAGTATTACATT+AGG + chr5_3:47486602-47486621 None:intergenic 15.0%
!!! CAAAAGATTTTTTTTTTGTT+TGG - chr5_3:47487348-47487367 Msa0814900:CDS 15.0%
!!! CTGATATGTAAAAGTATTTT+CGG - chr5_3:47480272-47480291 Msa0814900:intron 20.0%
!!! TTTTATTATATGAACAGTTC+TGG - chr5_3:47480333-47480352 Msa0814900:intron 20.0%
!! ATTCTGTGATTATGAAAAAT+AGG + chr5_3:47480370-47480389 None:intergenic 20.0%
!!! TCTAAACATGAAAATGTTTT+TGG - chr5_3:47481179-47481198 Msa0814900:intron 20.0%
!! TGATTCACTTATTAATTATG+AGG - chr5_3:47481442-47481461 Msa0814900:intron 20.0%
!! GCATAAATCAATTAAAGTAT+TGG + chr5_3:47481489-47481508 None:intergenic 20.0%
!!! TAGCAACTTTTAAAAAATCT+TGG - chr5_3:47481676-47481695 Msa0814900:CDS 20.0%
!!! AGATTTCTTAAGCTTTATTT+AGG + chr5_3:47481756-47481775 None:intergenic 20.0%
!!! AAATAATTAGTTTGGATTAG+AGG - chr5_3:47482530-47482549 Msa0814900:intron 20.0%
!!! AATAATTAGTTTGGATTAGA+GGG - chr5_3:47482531-47482550 Msa0814900:intron 20.0%
!! AGGTTGTAATATATATTCAT+AGG - chr5_3:47482556-47482575 Msa0814900:intron 20.0%
!! TTGTAATATATATTCATAGG+AGG - chr5_3:47482559-47482578 Msa0814900:intron 20.0%
!!! TAATAGATTTGTTTGATCTA+TGG - chr5_3:47483131-47483150 Msa0814900:intron 20.0%
!! TATCATTTCAAAATTTGGAA+TGG - chr5_3:47483164-47483183 Msa0814900:intron 20.0%
!!! ATCATTTCAAAATTTGGAAT+GGG - chr5_3:47483165-47483184 Msa0814900:intron 20.0%
!!! CTCATTTTTTAGATTGAATT+TGG + chr5_3:47483434-47483453 None:intergenic 20.0%
!! TCTAAAAAATGAGTGTATTA+AGG - chr5_3:47483441-47483460 Msa0814900:intron 20.0%
!!! ATATTATTCACTGTTATTTC+TGG - chr5_3:47483711-47483730 Msa0814900:intron 20.0%
!! TCTTTGTATAATTCTAACAT+AGG + chr5_3:47483743-47483762 None:intergenic 20.0%
!!! TTACAATTTTCCTCAAATTT+TGG - chr5_3:47483921-47483940 Msa0814900:intron 20.0%
!! TAAAATGTACATTCTCAAAT+TGG + chr5_3:47484115-47484134 None:intergenic 20.0%
!!! AATTTGAGAATGTACATTTT+AGG - chr5_3:47484114-47484133 Msa0814900:intron 20.0%
!!! GTTTGATTTGCTTAAAAATT+TGG - chr5_3:47484210-47484229 Msa0814900:intron 20.0%
!! AAAAATTTGGTACTTGAAAA+AGG - chr5_3:47484223-47484242 Msa0814900:intron 20.0%
!!! TTTTAAGTAGTGTTTACATT+GGG + chr5_3:47484362-47484381 None:intergenic 20.0%
!!! ATTTTAAGTAGTGTTTACAT+TGG + chr5_3:47484363-47484382 None:intergenic 20.0%
!! GAATTGAGTTTATGTAATTA+CGG - chr5_3:47484520-47484539 Msa0814900:intron 20.0%
!!! TTCTAAAACATGAAATGTAT+CGG - chr5_3:47485375-47485394 Msa0814900:intron 20.0%
!!! TTTTATACATCTGTACTATA+TGG - chr5_3:47485655-47485674 Msa0814900:CDS 20.0%
!! ATATTTCATAACATTCACTA+TGG - chr5_3:47486066-47486085 Msa0814900:intron 20.0%
!!! TACCATATATGCAATTTTAT+TGG - chr5_3:47486343-47486362 Msa0814900:intron 20.0%
!!! CATTGATAGCTAAATTTTAA+GGG + chr5_3:47486439-47486458 None:intergenic 20.0%
!! CTTAAAATTTAGCTATCAAT+GGG - chr5_3:47486438-47486457 Msa0814900:CDS 20.0%
!! TATTCTGATCATATATATTC+TGG - chr5_3:47486744-47486763 Msa0814900:CDS 20.0%
!! ATTCTGATCATATATATTCT+GGG - chr5_3:47486745-47486764 Msa0814900:CDS 20.0%
!!! ATCACATCAATTTTCTATAA+AGG - chr5_3:47487676-47487695 Msa0814900:intron 20.0%
! AACTATTTAACATTCTGTTG+TGG - chr5_3:47479633-47479652 Msa0814900:three_prime_UTR 25.0%
!!! AAAAGCATCTACATCAATAT+TGG + chr5_3:47480082-47480101 None:intergenic 25.0%
! TTAAATGATTCAACTGATTG+TGG - chr5_3:47480156-47480175 Msa0814900:CDS 25.0%
! TTTCATAATCACAGAATAGT+TGG - chr5_3:47480373-47480392 Msa0814900:intron 25.0%
! CAAGAAAACTAAGAAAAGAA+AGG - chr5_3:47480561-47480580 Msa0814900:CDS 25.0%
! AAAAGTCAAATGAAGTACAA+AGG + chr5_3:47481259-47481278 None:intergenic 25.0%
!!! TGCTGTTTTTATCTTCAATT+TGG - chr5_3:47481506-47481525 Msa0814900:CDS 25.0%
! TTCTCTTATTGTATTACAGA+CGG - chr5_3:47481556-47481575 Msa0814900:intron 25.0%
!!! TCATCCTTTTTTTTTTTTGC+AGG - chr5_3:47481790-47481809 Msa0814900:intron 25.0%
!!! CATCCTTTTTTTTTTTTGCA+GGG - chr5_3:47481791-47481810 Msa0814900:intron 25.0%
! ATACCCTGCAAAAAAAAAAA+AGG + chr5_3:47481797-47481816 None:intergenic 25.0%
! TCAAATTAAATTCTATGTCG+AGG - chr5_3:47481969-47481988 Msa0814900:intron 25.0%
! CAAATTAAATTCTATGTCGA+GGG - chr5_3:47481970-47481989 Msa0814900:intron 25.0%
!!! TGTGTTTTGCTATTATATTG+AGG - chr5_3:47482034-47482053 Msa0814900:CDS 25.0%
! ACAAAATTGACAAAAATCAC+CGG + chr5_3:47482072-47482091 None:intergenic 25.0%
! CAGGTCATGATTATTAAATA+TGG + chr5_3:47482168-47482187 None:intergenic 25.0%
! CATATTTAATAATCATGACC+TGG - chr5_3:47482166-47482185 Msa0814900:intron 25.0%
! ATTGAGTTAGATTATAATCC+AGG + chr5_3:47482187-47482206 None:intergenic 25.0%
! TATAATCTAACTCAATATGC+AGG - chr5_3:47482191-47482210 Msa0814900:intron 25.0%
!!! CTTTTTAAAGTTTAATGTGG+AGG + chr5_3:47482337-47482356 None:intergenic 25.0%
! ATTCTAAATGTGTATGCTTA+TGG - chr5_3:47482371-47482390 Msa0814900:intron 25.0%
! AAATCGAGTAGCAAATAATT+GGG + chr5_3:47482490-47482509 None:intergenic 25.0%
! AAAATCGAGTAGCAAATAAT+TGG + chr5_3:47482491-47482510 None:intergenic 25.0%
!!! TACTCGATTTTTTCGTTAAT+CGG - chr5_3:47482500-47482519 Msa0814900:intron 25.0%
! AATATATATTCATAGGAGGA+AGG - chr5_3:47482563-47482582 Msa0814900:intron 25.0%
! ATATATATTCATAGGAGGAA+GGG - chr5_3:47482564-47482583 Msa0814900:intron 25.0%
!!! TTTGTTTTTGTGGTTGAATT+AGG + chr5_3:47482927-47482946 None:intergenic 25.0%
! GATCAAACAAATCTATTAGT+GGG + chr5_3:47483129-47483148 None:intergenic 25.0%
! AGATCAAACAAATCTATTAG+TGG + chr5_3:47483130-47483149 None:intergenic 25.0%
!!! ACATATTTTAGGATGCTTTT+GGG + chr5_3:47483199-47483218 None:intergenic 25.0%
! TGGTCATATATACTTTAATG+TGG - chr5_3:47483250-47483269 Msa0814900:intron 25.0%
! GGTCATATATACTTTAATGT+GGG - chr5_3:47483251-47483270 Msa0814900:intron 25.0%
!! GAAAATCCCTTTTTATCAAT+AGG - chr5_3:47483490-47483509 Msa0814900:CDS 25.0%
! ATTCTGCCTATTGATAAAAA+GGG + chr5_3:47483499-47483518 None:intergenic 25.0%
! TATTCTGCCTATTGATAAAA+AGG + chr5_3:47483500-47483519 None:intergenic 25.0%
! CATATAAACTTGGAAGAAAA+AGG + chr5_3:47483553-47483572 None:intergenic 25.0%
! GCATTTATTCGAATAAATGA+AGG + chr5_3:47483947-47483966 None:intergenic 25.0%
! AAGATTGCGAATTAAGAATT+TGG + chr5_3:47484427-47484446 None:intergenic 25.0%
! TACTCTATATAATATTCGCT+AGG - chr5_3:47484586-47484605 Msa0814900:intron 25.0%
! AATTCATTTCCTAATAGACA+TGG - chr5_3:47484766-47484785 Msa0814900:intron 25.0%
! TACAAATTTCCATGTCTATT+AGG + chr5_3:47484778-47484797 None:intergenic 25.0%
! GCAAGTAAGAAATTTCATAA+TGG + chr5_3:47485002-47485021 None:intergenic 25.0%
! TTAGTGATATAGTGCTAAAA+GGG + chr5_3:47485096-47485115 None:intergenic 25.0%
! ATTAGTGATATAGTGCTAAA+AGG + chr5_3:47485097-47485116 None:intergenic 25.0%
!! ATTATTGTTTCACCTTTTCT+TGG - chr5_3:47485205-47485224 Msa0814900:intron 25.0%
!! AATGTATCGGTATTCAAATT+TGG - chr5_3:47485388-47485407 Msa0814900:intron 25.0%
! ATCAAATGTCATATATAGCA+TGG + chr5_3:47485601-47485620 None:intergenic 25.0%
!! TAGAGTGTCTTAAATCATTA+TGG - chr5_3:47485715-47485734 Msa0814900:CDS 25.0%
!!! TGAATGACTAGTTTAAAGAT+TGG - chr5_3:47485786-47485805 Msa0814900:intron 25.0%
!! GTAGTTGCCTTTTATATTTA+AGG - chr5_3:47485808-47485827 Msa0814900:intron 25.0%
!!! AAGAGCACCTTAAATATAAA+AGG + chr5_3:47485818-47485837 None:intergenic 25.0%
! AGATAGATGATCAAGATATT+CGG - chr5_3:47485882-47485901 Msa0814900:intron 25.0%
! CTTTACAAATTTCCTTTGTT+AGG - chr5_3:47486152-47486171 Msa0814900:CDS 25.0%
! TTAATAAGCTAAGAACATGT+TGG + chr5_3:47486180-47486199 None:intergenic 25.0%
! TGCCAATAAAATTGCATATA+TGG + chr5_3:47486348-47486367 None:intergenic 25.0%
!!! CCATTGATAGCTAAATTTTA+AGG + chr5_3:47486440-47486459 None:intergenic 25.0%
! CCTTAAAATTTAGCTATCAA+TGG - chr5_3:47486437-47486456 Msa0814900:CDS 25.0%
!!! TGCTTTTTTTAACAGTTAAG+TGG - chr5_3:47486659-47486678 Msa0814900:intron 25.0%
!!! TTTTTTTAACAGTTAAGTGG+TGG - chr5_3:47486662-47486681 Msa0814900:intron 25.0%
! TTCTGATCATATATATTCTG+GGG - chr5_3:47486746-47486765 Msa0814900:CDS 25.0%
!! ACACACTTCTAATCTAAAAT+AGG + chr5_3:47486793-47486812 None:intergenic 25.0%
! ACAAAATTGAGAACTGTTAA+AGG + chr5_3:47487079-47487098 None:intergenic 25.0%
! TCGATTAGTAATCTATATGT+TGG - chr5_3:47487209-47487228 Msa0814900:intron 25.0%
!! CAATATTCAGATCATTGTTT+TGG - chr5_3:47487371-47487390 Msa0814900:CDS 25.0%
! AGTTTCACATTCTTTATCAT+TGG - chr5_3:47487650-47487669 Msa0814900:intron 25.0%
! GTTTCACATTCTTTATCATT+GGG - chr5_3:47487651-47487670 Msa0814900:intron 25.0%
!! CATAATTTATTGGTGTTCAA+AGG - chr5_3:47487718-47487737 Msa0814900:CDS 25.0%
! GGATTATTGACTATTGTTGT+TGG - chr5_3:47479654-47479673 Msa0814900:three_prime_UTR 30.0%
! TTGACTATTGTTGTTGGTAA+TGG - chr5_3:47479660-47479679 Msa0814900:three_prime_UTR 30.0%
GACACATTAACAAATGAGTT+GGG + chr5_3:47479960-47479979 None:intergenic 30.0%
AGACACATTAACAAATGAGT+TGG + chr5_3:47479961-47479980 None:intergenic 30.0%
TTGTTAATGTGTCTAACTTG+AGG - chr5_3:47479967-47479986 Msa0814900:three_prime_UTR 30.0%
ATTGGAATGCCAATATCTAA+TGG + chr5_3:47480064-47480083 None:intergenic 30.0%
GAATGAATCTTGAAAAACCA+AGG + chr5_3:47480123-47480142 None:intergenic 30.0%
! AATTCGTTTAGTTTCAAGGA+AGG - chr5_3:47480222-47480241 Msa0814900:intron 30.0%
CTGTGATTATGAAAAATAGG+TGG + chr5_3:47480367-47480386 None:intergenic 30.0%
ACAAATTAGCCATTTCTTCA+TGG + chr5_3:47480504-47480523 None:intergenic 30.0%
! ATGCAGAAAAGAAGCATAAA+TGG + chr5_3:47480684-47480703 None:intergenic 30.0%
CGACTAAAAAGAAAAAAGCT+AGG + chr5_3:47480742-47480761 None:intergenic 30.0%
!! TTTCTTTTTAGTCGAGAAAC+TGG - chr5_3:47480748-47480767 Msa0814900:intron 30.0%
TCAACTAGTGTAGATCATTT+AGG - chr5_3:47480907-47480926 Msa0814900:intron 30.0%
!!! GTATCTTAATTTTGACTTCC+TGG - chr5_3:47480956-47480975 Msa0814900:intron 30.0%
TTAATGAAAACATAGACACC+AGG + chr5_3:47480977-47480996 None:intergenic 30.0%
! TTTTACACTTTCTATCACAC+AGG - chr5_3:47481138-47481157 Msa0814900:intron 30.0%
TTCATGTTTAGATCAGTTCA+AGG + chr5_3:47481171-47481190 None:intergenic 30.0%
!!! TGCTCTTTTGTTTTCGTTTT+TGG - chr5_3:47481202-47481221 Msa0814900:intron 30.0%
TTCAATTTGGTTATCGCTAT+GGG - chr5_3:47481519-47481538 Msa0814900:intron 30.0%
GTACCTAAAGAGTAAGTAAT+TGG - chr5_3:47481625-47481644 Msa0814900:CDS 30.0%
GAACCAATTACTTACTCTTT+AGG + chr5_3:47481631-47481650 None:intergenic 30.0%
! AGAGTAAGTAATTGGTTCTT+TGG - chr5_3:47481633-47481652 Msa0814900:CDS 30.0%
!!! TTTTTTTTTTGCAGGGTATG+AGG - chr5_3:47481798-47481817 Msa0814900:intron 30.0%
AAGAGCAGTACTAAATATAG+CGG + chr5_3:47481875-47481894 None:intergenic 30.0%
!! CGTCATTTTGGAGATAATTA+TGG - chr5_3:47482604-47482623 Msa0814900:CDS 30.0%
TACACACATAAAGTCAAGAA+TGG - chr5_3:47482739-47482758 Msa0814900:intron 30.0%
! TTCTCCAACTACATAGTTTT+CGG + chr5_3:47482783-47482802 None:intergenic 30.0%
TATGTAGTTGGAGAAAATCA+AGG - chr5_3:47482788-47482807 Msa0814900:intron 30.0%
!!! ACTACATGAGTTTGTTTTTG+TGG + chr5_3:47482937-47482956 None:intergenic 30.0%
! AGATTTGTTTGATCTATGGT+AGG - chr5_3:47483135-47483154 Msa0814900:intron 30.0%
!!! CATATTTTAGGATGCTTTTG+GGG + chr5_3:47483198-47483217 None:intergenic 30.0%
!!! CACATATTTTAGGATGCTTT+TGG + chr5_3:47483200-47483219 None:intergenic 30.0%
! AAAGCATCCTAAAATATGTG+AGG - chr5_3:47483200-47483219 Msa0814900:intron 30.0%
AGAGTAACACTTTATGAAGA+TGG - chr5_3:47483389-47483408 Msa0814900:intron 30.0%
!!! AAAAGGAAACATGCTGATTT+TGG - chr5_3:47483775-47483794 Msa0814900:intron 30.0%
!!! CAAAGGTGTCAATTTTATGA+CGG - chr5_3:47483839-47483858 Msa0814900:intron 30.0%
!!! AAAGGTGTCAATTTTATGAC+GGG - chr5_3:47483840-47483859 Msa0814900:intron 30.0%
TAAATGAAGGCCAAAATTTG+AGG + chr5_3:47483934-47483953 None:intergenic 30.0%
GTGTATGTGATCATATTTAC+TGG - chr5_3:47483968-47483987 Msa0814900:intron 30.0%
! CTTTTTCCTGTCACAATATT+AGG + chr5_3:47484037-47484056 None:intergenic 30.0%
TGGCATTATTATGGAGTAAA+GGG + chr5_3:47484151-47484170 None:intergenic 30.0%
AAAGTAAACTAAAGGAATGG+TGG + chr5_3:47484171-47484190 None:intergenic 30.0%
CCAAAAGTAAACTAAAGGAA+TGG + chr5_3:47484174-47484193 None:intergenic 30.0%
!! CCATTCCTTTAGTTTACTTT+TGG - chr5_3:47484171-47484190 Msa0814900:intron 30.0%
!! TTTACTTTTGGCCATCAAAT+AGG - chr5_3:47484183-47484202 Msa0814900:intron 30.0%
ATCAAACAGATCCTATTTGA+TGG + chr5_3:47484197-47484216 None:intergenic 30.0%
TTATGTAATTACGGCACTTA+AGG - chr5_3:47484529-47484548 Msa0814900:intron 30.0%
ACAGAAAGAAAGATACTAGA+TGG - chr5_3:47484907-47484926 Msa0814900:intron 30.0%
!! GTAAAAGTGTTGCAATTGTT+GGG - chr5_3:47484953-47484972 Msa0814900:intron 30.0%
ACAAAAAAAATTCCGACCAT+AGG + chr5_3:47485055-47485074 None:intergenic 30.0%
AAAGGGTAAAAATATAGCCA+CGG + chr5_3:47485079-47485098 None:intergenic 30.0%
TGAAAAATAAAGGGAAACAG+TGG + chr5_3:47485163-47485182 None:intergenic 30.0%
! TTGGTAACTTCGTTGAATAA+TGG - chr5_3:47485224-47485243 Msa0814900:intron 30.0%
TCGGTATTCAAATTTGGATA+TGG - chr5_3:47485394-47485413 Msa0814900:intron 30.0%
!!! TGGTGTTCTGTTTTATTTTC+TGG - chr5_3:47485414-47485433 Msa0814900:intron 30.0%
CATATTCATACATGATTGAC+AGG - chr5_3:47485481-47485500 Msa0814900:intron 30.0%
ATTTCTTACACTTCCAGAAT+GGG + chr5_3:47485548-47485567 None:intergenic 30.0%
TTGATGTTTACTGTCCTATT+TGG - chr5_3:47485616-47485635 Msa0814900:intron 30.0%
CAATTACATGTATCAAACCA+CGG + chr5_3:47485759-47485778 None:intergenic 30.0%
GATAGATGATCAAGATATTC+GGG - chr5_3:47485883-47485902 Msa0814900:intron 30.0%
TGTTTACTTACAGTATCTTG+TGG + chr5_3:47485950-47485969 None:intergenic 30.0%
CAAATGTATAGCAGTACAAA+AGG + chr5_3:47486120-47486139 None:intergenic 30.0%
TGAACAGTTGTAACTTGATA+TGG - chr5_3:47486393-47486412 Msa0814900:intron 30.0%
!! TGATAGCTAAATTTTAAGGG+AGG + chr5_3:47486436-47486455 None:intergenic 30.0%
AATTTAGCTATCAATGGGTA+AGG - chr5_3:47486443-47486462 Msa0814900:CDS 30.0%
TTTACAGTATTACATTAGGG+AGG + chr5_3:47486598-47486617 None:intergenic 30.0%
! GACAATCTCTCAAATTTTCA+CGG - chr5_3:47486632-47486651 Msa0814900:intron 30.0%
AAATGACTCCTCTATCAAAA+TGG + chr5_3:47486820-47486839 None:intergenic 30.0%
GTAAATAAACAGCTAAACAC+TGG + chr5_3:47487112-47487131 None:intergenic 30.0%
TATTCCAGAACACATATAAC+TGG - chr5_3:47487179-47487198 Msa0814900:intron 30.0%
AAAACCAGTTATATGTGTTC+TGG + chr5_3:47487186-47487205 None:intergenic 30.0%
! TGTGTGACGAATTTTTATGA+TGG + chr5_3:47487261-47487280 None:intergenic 30.0%
! TTTTGATGTAAGTCATGCAA+TGG + chr5_3:47487333-47487352 None:intergenic 30.0%
!!! CAGATCATTGTTTTGGAAAA+TGG - chr5_3:47487378-47487397 Msa0814900:CDS 30.0%
!!! TGTTTTGGAAAATGGAAAGA+TGG - chr5_3:47487386-47487405 Msa0814900:intron 30.0%
!! CTTGTTATTTAGAAGTGCTT+TGG + chr5_3:47487844-47487863 None:intergenic 30.0%
!!! GTGCTCTATTTTTGTCTTTC+AGG - chr5_3:47479704-47479723 Msa0814900:three_prime_UTR 35.0%
!!! CTTTCAGGTTTTGAATGTTC+AGG - chr5_3:47479719-47479738 Msa0814900:three_prime_UTR 35.0%
CTCCAAGCTTGAATAAGAAA+GGG + chr5_3:47479746-47479765 None:intergenic 35.0%
ACTCCAAGCTTGAATAAGAA+AGG + chr5_3:47479747-47479766 None:intergenic 35.0%
! TATTCAAGCTTGGAGTTGAT+TGG - chr5_3:47479751-47479770 Msa0814900:three_prime_UTR 35.0%
! AAATGAGTTGGGTTTCAGAT+AGG + chr5_3:47479949-47479968 None:intergenic 35.0%
GATTCTCCTCCATTAGATAT+TGG - chr5_3:47480052-47480071 Msa0814900:exon 35.0%
!!! TGTTTTCTAAGGTAGCACTA+CGG - chr5_3:47480197-47480216 Msa0814900:intron 35.0%
! GGACAATTCGTTTAGTTTCA+AGG - chr5_3:47480218-47480237 Msa0814900:intron 35.0%
TAGTTGGTTGTATGATGTCA+CGG - chr5_3:47480389-47480408 Msa0814900:intron 35.0%
TGTTAGTATTTGACTGTTGC+AGG - chr5_3:47480423-47480442 Msa0814900:intron 35.0%
TTAGATGATATCGAAGGTCA+AGG + chr5_3:47480468-47480487 None:intergenic 35.0%
TTGACCTTCGATATCATCTA+AGG - chr5_3:47480467-47480486 Msa0814900:intron 35.0%
CATACCTTAGATGATATCGA+AGG + chr5_3:47480474-47480493 None:intergenic 35.0%
! CTTCGATATCATCTAAGGTA+TGG - chr5_3:47480472-47480491 Msa0814900:intron 35.0%
GGAGGAGAATATTATCTACT+GGG + chr5_3:47480663-47480682 None:intergenic 35.0%
TGGAGGAGAATATTATCTAC+TGG + chr5_3:47480664-47480683 None:intergenic 35.0%
! CAGAAAAGAAGCATAAATGG+AGG + chr5_3:47480681-47480700 None:intergenic 35.0%
AAAGAAAAAAGCTAGGTGAG+AGG + chr5_3:47480735-47480754 None:intergenic 35.0%
TTAAGTCGAACAATTGATCG+TGG - chr5_3:47480775-47480794 Msa0814900:intron 35.0%
TACTATGTTGAACAACGTAG+AGG + chr5_3:47480827-47480846 None:intergenic 35.0%
CATAGTACCTACCATATTAG+AGG - chr5_3:47480840-47480859 Msa0814900:intron 35.0%
GCAACAAGAAAAGAAAACTG+AGG + chr5_3:47480870-47480889 None:intergenic 35.0%
! GTGTAGATCATTTAGGATCA+CGG - chr5_3:47480914-47480933 Msa0814900:intron 35.0%
CATATCGATCCAGATATCTA+TGG - chr5_3:47481039-47481058 Msa0814900:intron 35.0%
ATCCAGATATCTATGGTATC+AGG - chr5_3:47481046-47481065 Msa0814900:intron 35.0%
TACCTGATACCATAGATATC+TGG + chr5_3:47481051-47481070 None:intergenic 35.0%
ATCTATGGTATCAGGTATAC+TGG - chr5_3:47481054-47481073 Msa0814900:intron 35.0%
!! AAAAGGTGCTCCATATTTGT+AGG + chr5_3:47481080-47481099 None:intergenic 35.0%
AATATATGCAGCAACTGACA+GGG + chr5_3:47481116-47481135 None:intergenic 35.0%
! TTGTTATTAGCCAACTGCAT+TGG - chr5_3:47481302-47481321 Msa0814900:CDS 35.0%
! TATGTTCTCTACCTTTTCAG+TGG - chr5_3:47481360-47481379 Msa0814900:intron 35.0%
AATTTAGTCCTCCACTGAAA+AGG + chr5_3:47481374-47481393 None:intergenic 35.0%
ATTCAGGAAAGCCATGAATA+AGG - chr5_3:47481391-47481410 Msa0814900:intron 35.0%
!! GTCATTATCAGCCTTATTCA+TGG + chr5_3:47481405-47481424 None:intergenic 35.0%
! TGATAATGACGCTAGTACTA+GGG - chr5_3:47481415-47481434 Msa0814900:intron 35.0%
CTTCAATTTGGTTATCGCTA+TGG - chr5_3:47481518-47481537 Msa0814900:intron 35.0%
! AGTCTTGCTTTGTTGAACTT+TGG - chr5_3:47481844-47481863 Msa0814900:intron 35.0%
!!! CAATGGTTTTGTGTTCTCAT+GGG - chr5_3:47481902-47481921 Msa0814900:intron 35.0%
AAATTGACAAAAATCACCGG+AGG + chr5_3:47482069-47482088 None:intergenic 35.0%
! AATATGCAGGTGATGGTAAA+TGG - chr5_3:47482204-47482223 Msa0814900:intron 35.0%
! ATATGCAGGTGATGGTAAAT+GGG - chr5_3:47482205-47482224 Msa0814900:intron 35.0%
AATAGAGTGGAAGAGATAGT+TGG + chr5_3:47482239-47482258 None:intergenic 35.0%
TACCTCAAGTAACTGAAACA+TGG + chr5_3:47482313-47482332 None:intergenic 35.0%
AAATGTAAGTGTTAGCCGTT+AGG - chr5_3:47482456-47482475 Msa0814900:intron 35.0%
! TCGAAGTTCTTCAAGTTTGT+CGG - chr5_3:47482653-47482672 Msa0814900:CDS 35.0%
TACTAGCATTGTGAGAAATC+TGG + chr5_3:47482688-47482707 None:intergenic 35.0%
TCCATCATAGGAATTCTTCA+TGG - chr5_3:47482716-47482735 Msa0814900:intron 35.0%
ACCATGAAGAATTCCTATGA+TGG + chr5_3:47482720-47482739 None:intergenic 35.0%
TAGTCAATCACAGCCAAAAA+TGG + chr5_3:47482820-47482839 None:intergenic 35.0%
AAATGAGTAGAGTTGAGACA+TGG + chr5_3:47482994-47483013 None:intergenic 35.0%
TCTCAACTCTACTCATTTGT+AGG - chr5_3:47482996-47483015 Msa0814900:intron 35.0%
CTCAACTCTACTCATTTGTA+GGG - chr5_3:47482997-47483016 Msa0814900:intron 35.0%
! TGGCAATCCTCACATATTTT+AGG + chr5_3:47483210-47483229 None:intergenic 35.0%
AAGTAGTCCTTATAAGGCTT+TGG + chr5_3:47483230-47483249 None:intergenic 35.0%
! AAGCCTTATAAGGACTACTT+TGG - chr5_3:47483230-47483249 Msa0814900:intron 35.0%
TGACCAAAGTAGTCCTTATA+AGG + chr5_3:47483236-47483255 None:intergenic 35.0%
GAGGCTAATGTGAAATAATG+AGG - chr5_3:47483336-47483355 Msa0814900:intron 35.0%
! AACCAATTTCCTAGGTTTTG+CGG + chr5_3:47483364-47483383 None:intergenic 35.0%
AAGATGGAGTGTACTATACA+AGG - chr5_3:47483405-47483424 Msa0814900:intron 35.0%
AGATGGAGTGTACTATACAA+GGG - chr5_3:47483406-47483425 Msa0814900:intron 35.0%
TCTACTTTCTAATGAGCTTC+CGG - chr5_3:47483622-47483641 Msa0814900:intron 35.0%
GAATTATACAAAGACAGCCT+AGG - chr5_3:47483749-47483768 Msa0814900:intron 35.0%
! ATTTTGGATCCCATGACATT+TGG - chr5_3:47483791-47483810 Msa0814900:intron 35.0%
! TTTTGGATCCCATGACATTT+GGG - chr5_3:47483792-47483811 Msa0814900:intron 35.0%
! ACACCTTTGATAACTGATTC+CGG + chr5_3:47483828-47483847 None:intergenic 35.0%
GGAAAATTGTAATCTGACAC+AGG + chr5_3:47483913-47483932 None:intergenic 35.0%
TCCTGTCACAATATTAGGAA+TGG + chr5_3:47484032-47484051 None:intergenic 35.0%
ACAGGAAAAAGCAGACATTA+AGG - chr5_3:47484046-47484065 Msa0814900:intron 35.0%
AAGAAAATGCAAAGCCTCTA+AGG - chr5_3:47484072-47484091 Msa0814900:intron 35.0%
!! CAAAGCCTCTAAGGTTTAAT+GGG - chr5_3:47484081-47484100 Msa0814900:intron 35.0%
!! AAAGCCTCTAAGGTTTAATG+GGG - chr5_3:47484082-47484101 Msa0814900:intron 35.0%
GTGGCATTATTATGGAGTAA+AGG + chr5_3:47484152-47484171 None:intergenic 35.0%
AAGGAATGGTGGCATTATTA+TGG + chr5_3:47484160-47484179 None:intergenic 35.0%
GATGGCCAAAAGTAAACTAA+AGG + chr5_3:47484179-47484198 None:intergenic 35.0%
TAATTACGGCACTTAAGGTA+AGG - chr5_3:47484534-47484553 Msa0814900:intron 35.0%
CTAGTATCTTTCTTTCTGTG+AGG + chr5_3:47484906-47484925 None:intergenic 35.0%
!! GGTAAAAGTGTTGCAATTGT+TGG - chr5_3:47484952-47484971 Msa0814900:intron 35.0%
!!! TCGGAATTTTTTTTGTTCCG+TGG - chr5_3:47485059-47485078 Msa0814900:intron 35.0%
TCAACGAAGTTACCAAGAAA+AGG + chr5_3:47485220-47485239 None:intergenic 35.0%
AGATATCTGATGGAAGATCA+TGG - chr5_3:47485279-47485298 Msa0814900:CDS 35.0%
! CAATGCAAAAGCATGATACA+TGG + chr5_3:47485317-47485336 None:intergenic 35.0%
! TCTGAATAGCATTCTGAGAA+GGG + chr5_3:47485515-47485534 None:intergenic 35.0%
! ATCTGAATAGCATTCTGAGA+AGG + chr5_3:47485516-47485535 None:intergenic 35.0%
!!! AGATTTTTTGATCCCCATTC+TGG - chr5_3:47485532-47485551 Msa0814900:intron 35.0%
TTTCTTACACTTCCAGAATG+GGG + chr5_3:47485547-47485566 None:intergenic 35.0%
CATTTCTTACACTTCCAGAA+TGG + chr5_3:47485549-47485568 None:intergenic 35.0%
TAATGACCATCGATCCAAAT+AGG + chr5_3:47485633-47485652 None:intergenic 35.0%
ATGTATCCCTTGAGAGTTTA+CGG - chr5_3:47485906-47485925 Msa0814900:intron 35.0%
AAACCTGAGTGATTATGTGT+AGG - chr5_3:47486026-47486045 Msa0814900:intron 35.0%
TTCATAACATTCACTATGGC+CGG - chr5_3:47486070-47486089 Msa0814900:intron 35.0%
AACATGTTGGAACCTAACAA+AGG + chr5_3:47486167-47486186 None:intergenic 35.0%
!! ACAACAGTGGAGTATTTTTC+AGG + chr5_3:47486271-47486290 None:intergenic 35.0%
TGAAAAATACTCCACTGTTG+TGG - chr5_3:47486270-47486289 Msa0814900:intron 35.0%
GAAAAATACTCCACTGTTGT+GGG - chr5_3:47486271-47486290 Msa0814900:intron 35.0%
CATCAAAGCACGATAAATAG+TGG + chr5_3:47486322-47486341 None:intergenic 35.0%
! CAATTTTATTGGCATGCCAT+TGG - chr5_3:47486354-47486373 Msa0814900:intron 35.0%
AACTACAATCATCACACCAA+TGG + chr5_3:47486373-47486392 None:intergenic 35.0%
ACTTGATATGGACAAACACT+TGG - chr5_3:47486405-47486424 Msa0814900:intron 35.0%
ACCGAGTATTCCATACTATT+CGG - chr5_3:47486487-47486506 Msa0814900:CDS 35.0%
ACCGAATAGTATGGAATACT+CGG + chr5_3:47486491-47486510 None:intergenic 35.0%
!! TATTCCATACTATTCGGTGT+GGG - chr5_3:47486493-47486512 Msa0814900:CDS 35.0%
! AAGCATGTTGATAAGGACTT+GGG + chr5_3:47486538-47486557 None:intergenic 35.0%
!! TTTTAAGAATGCTCGAGCAA+GGG + chr5_3:47486705-47486724 None:intergenic 35.0%
!! ATTTTAAGAATGCTCGAGCA+AGG + chr5_3:47486706-47486725 None:intergenic 35.0%
CAGAATACTTACAGTATTGC+AGG + chr5_3:47486731-47486750 None:intergenic 35.0%
!! GTGTGTTACCATTTTGATAG+AGG - chr5_3:47486809-47486828 Msa0814900:intron 35.0%
TAATGAAACAAGCGTGTGTA+TGG + chr5_3:47486857-47486876 None:intergenic 35.0%
ACACGGCAGTTAAAAGAAAA+TGG + chr5_3:47486882-47486901 None:intergenic 35.0%
TAAGTCATGCAATGGCATAA+GGG + chr5_3:47487325-47487344 None:intergenic 35.0%
AATTGATACAGCCATCAAAG+TGG - chr5_3:47487494-47487513 Msa0814900:intron 35.0%
ATTGATACAGCCATCAAAGT+GGG - chr5_3:47487495-47487514 Msa0814900:intron 35.0%
GACACTGTATCAAGAAACAA+TGG + chr5_3:47487607-47487626 None:intergenic 35.0%
! ATACAAAATCTTGCTGTCCA+CGG + chr5_3:47487783-47487802 None:intergenic 35.0%
! TGGACAGCAAGATTTTGTAT+TGG - chr5_3:47487783-47487802 Msa0814900:five_prime_UTR 35.0%
AGTCTAGCACTCAATATACA+AGG + chr5_3:47487875-47487894 None:intergenic 35.0%
GCAAAATAAGCAGTATACAC+TGG + chr5_3:47487900-47487919 None:intergenic 35.0%
AATGGCTAAGTCACTTGTGA+TGG - chr5_3:47479678-47479697 Msa0814900:three_prime_UTR 40.0%
GTCCCTTTCTTATTCAAGCT+TGG - chr5_3:47479741-47479760 Msa0814900:three_prime_UTR 40.0%
! TGATTGGTTGAATACTGCCA+CGG - chr5_3:47479767-47479786 Msa0814900:three_prime_UTR 40.0%
TGCTTCGAATCCTACTATGA+TGG - chr5_3:47479806-47479825 Msa0814900:three_prime_UTR 40.0%
!! GCAAAAAGTGCCATCATAGT+AGG + chr5_3:47479819-47479838 None:intergenic 40.0%
TATCCAATCAACACTGCCAT+GGG + chr5_3:47479846-47479865 None:intergenic 40.0%
ATATCCAATCAACACTGCCA+TGG + chr5_3:47479847-47479866 None:intergenic 40.0%
!! ATGGCAGTGTTGATTGGATA+TGG - chr5_3:47479846-47479865 Msa0814900:three_prime_UTR 40.0%
!! TGGCAGTGTTGATTGGATAT+GGG - chr5_3:47479847-47479866 Msa0814900:three_prime_UTR 40.0%
ATGGAGGAGAATCACAACTA+GGG + chr5_3:47480045-47480064 None:intergenic 40.0%
AATGGAGGAGAATCACAACT+AGG + chr5_3:47480046-47480065 None:intergenic 40.0%
GGAATGCCAATATCTAATGG+AGG + chr5_3:47480061-47480080 None:intergenic 40.0%
! TGTTTCTTTGAGAAGAGCCT+TGG - chr5_3:47480103-47480122 Msa0814900:CDS 40.0%
!!! GCGGAATGCTTTGTTTTCTA+AGG - chr5_3:47480186-47480205 Msa0814900:intron 40.0%
TGGCTTATGCCATGAAGAAA+TGG - chr5_3:47480492-47480511 Msa0814900:intron 40.0%
GCAAAGAAATCTCTCTTCTC+TGG + chr5_3:47480641-47480660 None:intergenic 40.0%
AGGCATACCTCTAATATGGT+AGG + chr5_3:47480850-47480869 None:intergenic 40.0%
ACTGAGGCATACCTCTAATA+TGG + chr5_3:47480854-47480873 None:intergenic 40.0%
GGATCACGGAGAATATTTAG+CGG - chr5_3:47480928-47480947 Msa0814900:intron 40.0%
GATCACGGAGAATATTTAGC+GGG - chr5_3:47480929-47480948 Msa0814900:intron 40.0%
! GGTATACTGGCCTACAAATA+TGG - chr5_3:47481067-47481086 Msa0814900:intron 40.0%
!! AATATGGAGCACCTTTTGCA+TGG - chr5_3:47481083-47481102 Msa0814900:intron 40.0%
AGGGAAGTAATCCATGCAAA+AGG + chr5_3:47481097-47481116 None:intergenic 40.0%
CAATATATGCAGCAACTGAC+AGG + chr5_3:47481117-47481136 None:intergenic 40.0%
CTGTCAGTTGCTGCATATAT+TGG - chr5_3:47481115-47481134 Msa0814900:intron 40.0%
! GGTCTTGTCAGATACATTAC+TGG - chr5_3:47481223-47481242 Msa0814900:intron 40.0%
TTCAGTGGAGGACTAAATTC+AGG - chr5_3:47481375-47481394 Msa0814900:intron 40.0%
! CTGATAATGACGCTAGTACT+AGG - chr5_3:47481414-47481433 Msa0814900:intron 40.0%
! AATCTTGGCAGTGTCGTTAT+TGG - chr5_3:47481691-47481710 Msa0814900:intron 40.0%
TCATACATCAACTCAGTGTG+GGG + chr5_3:47481733-47481752 None:intergenic 40.0%
GTCATACATCAACTCAGTGT+GGG + chr5_3:47481734-47481753 None:intergenic 40.0%
!! AAGACTCTGTTCGCTTTTCT+GGG + chr5_3:47481830-47481849 None:intergenic 40.0%
TACTGCTCTTTCAACAGCAA+TGG - chr5_3:47481885-47481904 Msa0814900:intron 40.0%
!!! GCAATGGTTTTGTGTTCTCA+TGG - chr5_3:47481901-47481920 Msa0814900:intron 40.0%
TGTTCTCATGGGATCATGAA+TGG - chr5_3:47481913-47481932 Msa0814900:intron 40.0%
ATGAATGGCACAATGACTGT+TGG - chr5_3:47481928-47481947 Msa0814900:intron 40.0%
!! CACAATGACTGTTGGTGATT+TGG - chr5_3:47481936-47481955 Msa0814900:intron 40.0%
ATTGAGGATCACTTATCCTC+CGG - chr5_3:47482050-47482069 Msa0814900:CDS 40.0%
CTAACTCAATATGCAGGTGA+TGG - chr5_3:47482197-47482216 Msa0814900:intron 40.0%
TCTCTTCCACTCTATTTCCT+TGG - chr5_3:47482243-47482262 Msa0814900:intron 40.0%
! ACATGGCTTTCATGTCGATT+AGG + chr5_3:47482296-47482315 None:intergenic 40.0%
AGCCATGTTTCAGTTACTTG+AGG - chr5_3:47482308-47482327 Msa0814900:intron 40.0%
AATTGGGTGGAACTACCTAA+CGG + chr5_3:47482474-47482493 None:intergenic 40.0%
TCGAGTAGCAAATAATTGGG+TGG + chr5_3:47482487-47482506 None:intergenic 40.0%
! TTAGTTTGGATTAGAGGGCT+AGG - chr5_3:47482536-47482555 Msa0814900:intron 40.0%
TTTGGAGATAATTATGGCCG+TGG - chr5_3:47482610-47482629 Msa0814900:CDS 40.0%
TTGGAGATAATTATGGCCGT+GGG - chr5_3:47482611-47482630 Msa0814900:CDS 40.0%
AGTATCTGAGCTTCCATCAT+AGG - chr5_3:47482704-47482723 Msa0814900:intron 40.0%
AAGTCAAGAATGGAGTTGAC+TGG - chr5_3:47482749-47482768 Msa0814900:intron 40.0%
AATGGAGTTGACTGGATAGT+TGG - chr5_3:47482757-47482776 Msa0814900:intron 40.0%
TTGGCCGAAAACTATGTAGT+TGG - chr5_3:47482776-47482795 Msa0814900:intron 40.0%
!! ATCAAGGATCGAGCCATTTT+TGG - chr5_3:47482804-47482823 Msa0814900:intron 40.0%
TTGGCTGTGATTGACTATCT+TGG - chr5_3:47482823-47482842 Msa0814900:intron 40.0%
TGGCAAAAGCAGTTCTTACA+AGG + chr5_3:47482974-47482993 None:intergenic 40.0%
! AGGATTGCCAAAGCCTTATA+AGG - chr5_3:47483220-47483239 Msa0814900:intron 40.0%
! CATGCTTTAGATGTCATCCT+AGG + chr5_3:47483301-47483320 None:intergenic 40.0%
! CTAGGATGACATCTAAAGCA+TGG - chr5_3:47483299-47483318 Msa0814900:intron 40.0%
TCTCACTCAACCAATTTCCT+AGG + chr5_3:47483372-47483391 None:intergenic 40.0%
CTACTTTCTAATGAGCTTCC+GGG - chr5_3:47483623-47483642 Msa0814900:intron 40.0%
!! TATCTCCATGAAAGTACTCC+CGG + chr5_3:47483644-47483663 None:intergenic 40.0%
AAAGACAGCCTAGGTAGAAA+AGG - chr5_3:47483758-47483777 Msa0814900:intron 40.0%
! GCATGTTTCCTTTTCTACCT+AGG + chr5_3:47483769-47483788 None:intergenic 40.0%
TTTGGATCCCATGACATTTG+GGG - chr5_3:47483793-47483812 Msa0814900:intron 40.0%
TAGGAAACCCCAAATGTCAT+GGG + chr5_3:47483803-47483822 None:intergenic 40.0%
GCAATATCTCAAAGTGATGC+AGG + chr5_3:47484006-47484025 None:intergenic 40.0%
GCCATTCCTAATATTGTGAC+AGG - chr5_3:47484028-47484047 Msa0814900:intron 40.0%
!! GCAAAGCCTCTAAGGTTTAA+TGG - chr5_3:47484080-47484099 Msa0814900:intron 40.0%
!! AAGCCTCTAAGGTTTAATGG+GGG - chr5_3:47484083-47484102 Msa0814900:intron 40.0%
TTTCCCCCATTAAACCTTAG+AGG + chr5_3:47484089-47484108 None:intergenic 40.0%
GAAGTTGTCTCATAGTTCGT+TGG + chr5_3:47484335-47484354 None:intergenic 40.0%
AGTTGCGAAGTAAGAAAACG+AGG + chr5_3:47484650-47484669 None:intergenic 40.0%
! TCGTTTTCTTACTTCGCAAC+TGG - chr5_3:47484649-47484668 Msa0814900:intron 40.0%
! ATTGCAACACTTTTACCAGC+TGG + chr5_3:47484949-47484968 None:intergenic 40.0%
!!! AAACTTTTTTCCGCTGCCTA+TGG - chr5_3:47485036-47485055 Msa0814900:intron 40.0%
! AACTTTGTTTGTGATTGGGG+TGG + chr5_3:47485137-47485156 None:intergenic 40.0%
! CGCAACTTTGTTTGTGATTG+GGG + chr5_3:47485140-47485159 None:intergenic 40.0%
! GCGCAACTTTGTTTGTGATT+GGG + chr5_3:47485141-47485160 None:intergenic 40.0%
! GCAAAAGCATGATACATGGA+TGG + chr5_3:47485313-47485332 None:intergenic 40.0%
TACTGTCCTATTTGGATCGA+TGG - chr5_3:47485624-47485643 Msa0814900:CDS 40.0%
AGACTTCCGTAAACTCTCAA+GGG + chr5_3:47485915-47485934 None:intergenic 40.0%
TAGACTTCCGTAAACTCTCA+AGG + chr5_3:47485916-47485935 None:intergenic 40.0%
GAGAGTTTACGGAAGTCTAT+TGG - chr5_3:47485917-47485936 Msa0814900:intron 40.0%
! AACATATTTCTGCCCTTGCT+AGG - chr5_3:47485989-47486008 Msa0814900:intron 40.0%
CAATTTGCAAGACCTAGCAA+GGG + chr5_3:47486004-47486023 None:intergenic 40.0%
ACAATTTGCAAGACCTAGCA+AGG + chr5_3:47486005-47486024 None:intergenic 40.0%
GTACCTACACATAATCACTC+AGG + chr5_3:47486032-47486051 None:intergenic 40.0%
! GAAAACTCGTGATAGTGTCA+TGG + chr5_3:47486249-47486268 None:intergenic 40.0%
GGTGGAGAATTTATGTGGTT+TGG + chr5_3:47486470-47486489 None:intergenic 40.0%
! TACTCGGTGGAGAATTTATG+TGG + chr5_3:47486475-47486494 None:intergenic 40.0%
GAATAGTATGGAATACTCGG+TGG + chr5_3:47486488-47486507 None:intergenic 40.0%
! GTATTCCATACTATTCGGTG+TGG - chr5_3:47486492-47486511 Msa0814900:CDS 40.0%
! CAAGCATGTTGATAAGGACT+TGG + chr5_3:47486539-47486558 None:intergenic 40.0%
AGTCCTTATCAACATGCTTG+TGG - chr5_3:47486539-47486558 Msa0814900:intron 40.0%
GTCCTTATCAACATGCTTGT+GGG - chr5_3:47486540-47486559 Msa0814900:intron 40.0%
TCCTTATCAACATGCTTGTG+GGG - chr5_3:47486541-47486560 Msa0814900:intron 40.0%
AAGAAAGGAACACAAACCTC+TGG - chr5_3:47486565-47486584 Msa0814900:intron 40.0%
AGAAAGGAACACAAACCTCT+GGG - chr5_3:47486566-47486585 Msa0814900:intron 40.0%
AGTATTACATTAGGGAGGAG+GGG + chr5_3:47486593-47486612 None:intergenic 40.0%
CAGTATTACATTAGGGAGGA+GGG + chr5_3:47486594-47486613 None:intergenic 40.0%
ACAGTATTACATTAGGGAGG+AGG + chr5_3:47486595-47486614 None:intergenic 40.0%
! CTTCCATTTTCATTGCTCAC+AGG - chr5_3:47486999-47487018 Msa0814900:intron 40.0%
TTGGACTCATCTTCACTGTA+AGG - chr5_3:47487228-47487247 Msa0814900:intron 40.0%
GTAAGTCATGCAATGGCATA+AGG + chr5_3:47487326-47487345 None:intergenic 40.0%
AATGGAAAGATGGTTGAGCA+TGG - chr5_3:47487396-47487415 Msa0814900:intron 40.0%
!! TTTGCTAAGAGCACTTCATG+TGG + chr5_3:47487423-47487442 None:intergenic 40.0%
AGGAAGATATGCACAGCTTT+GGG - chr5_3:47487446-47487465 Msa0814900:intron 40.0%
TCTTTATGCTCCCACTTTGA+TGG + chr5_3:47487508-47487527 None:intergenic 40.0%
TTCCTTGCTCTTCAAGAAAG+AGG - chr5_3:47487542-47487561 Msa0814900:intron 40.0%
TTCCTCTTTCTTGAAGAGCA+AGG + chr5_3:47487547-47487566 None:intergenic 40.0%
! GATTGGTTGAATACTGCCAC+GGG - chr5_3:47479768-47479787 Msa0814900:three_prime_UTR 45.0%
ATCCAATCAACACTGCCATG+GGG + chr5_3:47479845-47479864 None:intergenic 45.0%
! TCTGGAGCTTCTGCTTTCAA+TGG - chr5_3:47479879-47479898 Msa0814900:three_prime_UTR 45.0%
AACTGATTGTGGCAGAACTG+CGG - chr5_3:47480167-47480186 Msa0814900:CDS 45.0%
CGAACAATTGATCGTGGTAG+CGG - chr5_3:47480781-47480800 Msa0814900:intron 45.0%
! TATTAGCCAACTGCATTGGC+AGG - chr5_3:47481306-47481325 Msa0814900:CDS 45.0%
! ATTAGCCAACTGCATTGGCA+GGG - chr5_3:47481307-47481326 Msa0814900:CDS 45.0%
! ATTTTCCCTGCCAATGCAGT+TGG + chr5_3:47481315-47481334 None:intergenic 45.0%
! AACTGCATTGGCAGGGAAAA+TGG - chr5_3:47481314-47481333 Msa0814900:CDS 45.0%
! GTTCTCTACCTTTTCAGTGG+AGG - chr5_3:47481363-47481382 Msa0814900:intron 45.0%
ATCAACTCAGTGTGGGGATT+TGG + chr5_3:47481727-47481746 None:intergenic 45.0%
GGTCATACATCAACTCAGTG+TGG + chr5_3:47481735-47481754 None:intergenic 45.0%
!! CAAGACTCTGTTCGCTTTTC+TGG + chr5_3:47481831-47481850 None:intergenic 45.0%
CTTCCACTCTATTTCCTTGG+TGG - chr5_3:47482246-47482265 Msa0814900:intron 45.0%
ACACCACCAAGGAAATAGAG+TGG + chr5_3:47482252-47482271 None:intergenic 45.0%
TTGCACGATAAACACCACCA+AGG + chr5_3:47482263-47482282 None:intergenic 45.0%
ACACACACAAGTGCATACTC+AGG + chr5_3:47482413-47482432 None:intergenic 45.0%
TGCACTTGTGTGTGTGAACA+TGG - chr5_3:47482418-47482437 Msa0814900:intron 45.0%
TCATAGGAGGAAGGGATTAG+AGG - chr5_3:47482572-47482591 Msa0814900:intron 45.0%
CATAGGAGGAAGGGATTAGA+GGG - chr5_3:47482573-47482592 Msa0814900:intron 45.0%
TGGAGATAATTATGGCCGTG+GGG - chr5_3:47482612-47482631 Msa0814900:CDS 45.0%
ATAATTATGGCCGTGGGGAT+AGG - chr5_3:47482617-47482636 Msa0814900:CDS 45.0%
TAATTATGGCCGTGGGGATA+GGG - chr5_3:47482618-47482637 Msa0814900:CDS 45.0%
CTCATTTGTAGGGCCACATT+TGG - chr5_3:47483007-47483026 Msa0814900:intron 45.0%
ATTTGTCCCTGCTCCAAATG+TGG + chr5_3:47483023-47483042 None:intergenic 45.0%
! TTTGGAGCAGGGACAAATGT+TGG - chr5_3:47483025-47483044 Msa0814900:intron 45.0%
! GGGACAAATGTTGGTGGAAA+TGG - chr5_3:47483034-47483053 Msa0814900:intron 45.0%
CAACACATTGTCTCTCACCT+AGG - chr5_3:47483071-47483090 Msa0814900:intron 45.0%
CATTGTCTCTCACCTAGGAT+TGG - chr5_3:47483076-47483095 Msa0814900:intron 45.0%
! AAGCATGGACAGAAGCATGA+TGG - chr5_3:47483314-47483333 Msa0814900:intron 45.0%
TGCCGCAAAACCTAGGAAAT+TGG - chr5_3:47483359-47483378 Msa0814900:intron 45.0%
CTAGGAAACCCCAAATGTCA+TGG + chr5_3:47483804-47483823 None:intergenic 45.0%
! CATGACATTTGGGGTTTCCT+AGG - chr5_3:47483802-47483821 Msa0814900:intron 45.0%
! TTGATAACTGATTCCGGCCT+AGG + chr5_3:47483822-47483841 None:intergenic 45.0%
AGGCCGGAATCAGTTATCAA+AGG - chr5_3:47483822-47483841 Msa0814900:intron 45.0%
ATATCACTAGTTGTGCCAGC+TGG - chr5_3:47484931-47484950 Msa0814900:intron 45.0%
GTTGCAATTGTTGGGACTAG+TGG - chr5_3:47484961-47484980 Msa0814900:intron 45.0%
! ATTGTTGGGACTAGTGGAAG+TGG - chr5_3:47484967-47484986 Msa0814900:intron 45.0%
!!! TTTTTTCCGCTGCCTATGGT+CGG - chr5_3:47485040-47485059 Msa0814900:intron 45.0%
AAAATTCCGACCATAGGCAG+CGG + chr5_3:47485049-47485068 None:intergenic 45.0%
TGTGATTGGGGTGGCTAAAA+GGG + chr5_3:47485128-47485147 None:intergenic 45.0%
TTGTGATTGGGGTGGCTAAA+AGG + chr5_3:47485129-47485148 None:intergenic 45.0%
! GGCGCAACTTTGTTTGTGAT+TGG + chr5_3:47485142-47485161 None:intergenic 45.0%
CCATTGTGACTGCTAAGACA+CGG - chr5_3:47485253-47485272 Msa0814900:CDS 45.0%
!! GACACGGACTAGATATCTGA+TGG - chr5_3:47485269-47485288 Msa0814900:CDS 45.0%
!! TGTCATGGATTGCTGCTTTC+CGG + chr5_3:47486234-47486253 None:intergenic 45.0%
TGATAAGGACTTGGGTGTCA+AGG + chr5_3:47486530-47486549 None:intergenic 45.0%
TCCCCACAAGCATGTTGATA+AGG + chr5_3:47486545-47486564 None:intergenic 45.0%
ACATGCTTGTGGGGAAAGAA+AGG - chr5_3:47486550-47486569 Msa0814900:intron 45.0%
GAGCCTGTGAGCAATGAAAA+TGG + chr5_3:47487005-47487024 None:intergenic 45.0%
! GAAGTGCTCTTAGCAAATGC+AGG - chr5_3:47487426-47487445 Msa0814900:intron 45.0%
CAGGAAGATATGCACAGCTT+TGG - chr5_3:47487445-47487464 Msa0814900:intron 45.0%
GGAAGATATGCACAGCTTTG+GGG - chr5_3:47487447-47487466 Msa0814900:intron 45.0%
AACAACACTAGCATTGCCCG+TGG + chr5_3:47479787-47479806 None:intergenic 50.0%
TCCAATCAACACTGCCATGG+GGG + chr5_3:47479844-47479863 None:intergenic 50.0%
GGATATGGGATTGCACGTTC+TGG - chr5_3:47479861-47479880 Msa0814900:three_prime_UTR 50.0%
ACGAGCTCATGAGCTATCTG+AGG + chr5_3:47480010-47480029 None:intergenic 50.0%
TCAGATAGCTCATGAGCTCG+TGG - chr5_3:47480009-47480028 Msa0814900:three_prime_UTR 50.0%
GAGGAGAATCACAACTAGGG+TGG + chr5_3:47480042-47480061 None:intergenic 50.0%
! AGGGAGTGGTCTCGTCATTT+TGG - chr5_3:47482592-47482611 Msa0814900:intron 50.0%
TGCACTCTACGTCCAATCCT+AGG + chr5_3:47483091-47483110 None:intergenic 50.0%
GATGTCATCCTAGGCGTGAA+GGG + chr5_3:47483292-47483311 None:intergenic 50.0%
AGATGTCATCCTAGGCGTGA+AGG + chr5_3:47483293-47483312 None:intergenic 50.0%
! CATGGACAGAAGCATGATGG+AGG - chr5_3:47483317-47483336 Msa0814900:intron 50.0%
!! AATGAGGTGCCGCAAAACCT+AGG - chr5_3:47483352-47483371 Msa0814900:intron 50.0%
!! AGCTTCCGGGAGTACTTTCA+TGG - chr5_3:47483636-47483655 Msa0814900:intron 50.0%
! ACATTTGGGGTTTCCTAGGC+CGG - chr5_3:47483806-47483825 Msa0814900:intron 50.0%
CCGTGTCTTAGCAGTCACAA+TGG + chr5_3:47485256-47485275 None:intergenic 50.0%
TAATACAGAGTCCAACGCCG+TGG - chr5_3:47485739-47485758 Msa0814900:CDS 50.0%
CATGTATCAAACCACGGCGT+TGG + chr5_3:47485753-47485772 None:intergenic 50.0%
CCTCTTCTGTTGCTGAAAGC+CGG + chr5_3:47486092-47486111 None:intergenic 50.0%
GCTTTCAGCAACAGAAGAGG+AGG - chr5_3:47486092-47486111 Msa0814900:intron 50.0%
!! GTCATGGATTGCTGCTTTCC+GGG + chr5_3:47486233-47486252 None:intergenic 50.0%
ACGTCCCACACCGAATAGTA+TGG + chr5_3:47486500-47486519 None:intergenic 50.0%
!! TACTATTCGGTGTGGGACGT+TGG - chr5_3:47486500-47486519 Msa0814900:CDS 50.0%
CACAACCTACGAGCAAGACA+CGG + chr5_3:47486899-47486918 None:intergenic 50.0%
CTCATCACACTGCATTGCAG+TGG + chr5_3:47487029-47487048 None:intergenic 50.0%
CACTGCAATGCAGTGTGATG+AGG - chr5_3:47487027-47487046 Msa0814900:intron 50.0%
GAAGTTGAGTCGTCTTTCCG+TGG - chr5_3:47487763-47487782 Msa0814900:five_prime_UTR 50.0%
!! GGCACTTTTTGCTACCCCCA+TGG - chr5_3:47479827-47479846 Msa0814900:three_prime_UTR 55.0%
!! ACCCCCATGGCAGTGTTGAT+TGG - chr5_3:47479840-47479859 Msa0814900:three_prime_UTR 55.0%
GAGGAAGGGATTAGAGGGAG+TGG - chr5_3:47482578-47482597 Msa0814900:intron 55.0%
TCTGCAGTTCCCTATCCCCA+CGG + chr5_3:47482630-47482649 None:intergenic 55.0%
! TGTAGGGCCACATTTGGAGC+AGG - chr5_3:47483013-47483032 Msa0814900:intron 55.0%
! GTAGGGCCACATTTGGAGCA+GGG - chr5_3:47483014-47483033 Msa0814900:intron 55.0%
GGAGCAGGGACAAATGTTGG+TGG - chr5_3:47483028-47483047 Msa0814900:intron 55.0%
CCGGCTTTCAGCAACAGAAG+AGG - chr5_3:47486089-47486108 Msa0814900:intron 55.0%
TACAGGTCTATGAAGCCGCC+CGG - chr5_3:47486212-47486231 Msa0814900:intron 55.0%
!! ATGGATTGCTGCTTTCCGGG+CGG + chr5_3:47486230-47486249 None:intergenic 55.0%
TCCACTGTTGTGGGAGAACG+AGG - chr5_3:47486280-47486299 Msa0814900:intron 55.0%
CCACTGTTGTGGGAGAACGA+GGG - chr5_3:47486281-47486300 Msa0814900:intron 55.0%
TGTGGGAGAACGAGGGCTAA+AGG - chr5_3:47486288-47486307 Msa0814900:intron 55.0%
AACTGCCGTGTCTTGCTCGT+AGG - chr5_3:47486891-47486910 Msa0814900:intron 55.0%
GTCATCCTAGGCGTGAAGGG+CGG + chr5_3:47483289-47483308 None:intergenic 60.0%
CCCTCGTTCTCCCACAACAG+TGG + chr5_3:47486284-47486303 None:intergenic 60.0%
CATAGCCGCCCTTCACGCCT+AGG - chr5_3:47483281-47483300 Msa0814900:intron 65.0%
TTAGGGAGGAGGGGACCCAG+AGG + chr5_3:47486584-47486603 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 47479624 47487957 47479624 ID=Msa0814900;Name=Msa0814900
chr5_3 mRNA 47479624 47487957 47479624 ID=Msa0814900-mRNA-1;Parent=Msa0814900;Name=Msa0814900-mRNA-1;_AED=0.14;_eAED=0.14;_QI=198|1|1|1|1|1|18|433|539
chr5_3 exon 47479624 47480200 47479624 ID=Msa0814900-mRNA-1:exon:14410;Parent=Msa0814900-mRNA-1
chr5_3 exon 47480533 47480668 47480533 ID=Msa0814900-mRNA-1:exon:14409;Parent=Msa0814900-mRNA-1
chr5_3 exon 47480843 47480907 47480843 ID=Msa0814900-mRNA-1:exon:14408;Parent=Msa0814900-mRNA-1
chr5_3 exon 47481272 47481364 47481272 ID=Msa0814900-mRNA-1:exon:14407;Parent=Msa0814900-mRNA-1
chr5_3 exon 47481468 47481533 47481468 ID=Msa0814900-mRNA-1:exon:14406;Parent=Msa0814900-mRNA-1
chr5_3 exon 47481623 47481703 47481623 ID=Msa0814900-mRNA-1:exon:14405;Parent=Msa0814900-mRNA-1
chr5_3 exon 47482023 47482078 47482023 ID=Msa0814900-mRNA-1:exon:14404;Parent=Msa0814900-mRNA-1
chr5_3 exon 47482593 47482681 47482593 ID=Msa0814900-mRNA-1:exon:14403;Parent=Msa0814900-mRNA-1
chr5_3 exon 47483446 47483531 47483446 ID=Msa0814900-mRNA-1:exon:14402;Parent=Msa0814900-mRNA-1
chr5_3 exon 47485252 47485368 47485252 ID=Msa0814900-mRNA-1:exon:14401;Parent=Msa0814900-mRNA-1
chr5_3 exon 47485624 47485769 47485624 ID=Msa0814900-mRNA-1:exon:14400;Parent=Msa0814900-mRNA-1
chr5_3 exon 47485946 47486006 47485946 ID=Msa0814900-mRNA-1:exon:14399;Parent=Msa0814900-mRNA-1
chr5_3 exon 47486118 47486201 47486118 ID=Msa0814900-mRNA-1:exon:14398;Parent=Msa0814900-mRNA-1
chr5_3 exon 47486422 47486529 47486422 ID=Msa0814900-mRNA-1:exon:14397;Parent=Msa0814900-mRNA-1
chr5_3 exon 47486720 47486822 47486720 ID=Msa0814900-mRNA-1:exon:14396;Parent=Msa0814900-mRNA-1
chr5_3 exon 47487093 47487136 47487093 ID=Msa0814900-mRNA-1:exon:14395;Parent=Msa0814900-mRNA-1
chr5_3 exon 47487338 47487399 47487338 ID=Msa0814900-mRNA-1:exon:14394;Parent=Msa0814900-mRNA-1
chr5_3 exon 47487681 47487957 47487681 ID=Msa0814900-mRNA-1:exon:14393;Parent=Msa0814900-mRNA-1
chr5_3 five_prime_UTR 47487760 47487957 47487760 ID=Msa0814900-mRNA-1:five_prime_utr;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47487681 47487759 47487681 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47487338 47487399 47487338 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47487093 47487136 47487093 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47486720 47486822 47486720 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47486422 47486529 47486422 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47486118 47486201 47486118 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47485946 47486006 47485946 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47485624 47485769 47485624 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47485252 47485368 47485252 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47483446 47483531 47483446 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47482593 47482681 47482593 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47482023 47482078 47482023 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47481623 47481703 47481623 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47481468 47481533 47481468 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47481272 47481364 47481272 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47480843 47480907 47480843 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47480533 47480668 47480533 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 CDS 47480057 47480200 47480057 ID=Msa0814900-mRNA-1:cds;Parent=Msa0814900-mRNA-1
chr5_3 three_prime_UTR 47479624 47480056 47479624 ID=Msa0814900-mRNA-1:three_prime_utr;Parent=Msa0814900-mRNA-1
Gene Sequence

>Msa0814900

ATGATGGCACTTTTTGCTACCCCCATGGCAGTGTTGATTGGATATGGGATTGCACGTTCTGGAGCTTCTGCTTTCAATGAACTGCGGAATGCTTTGTTTTCTAAGGTAGCACTACGGACAATTCGTTTAGTTTCAAGGAAGGTCTTTTCACATTTGCATGACCTTGACCTTCGATATCATCTAAGTCGAGAAACTGGTGCATTAAGTCGAACAATTGATCGTGGTAGCGGAGCAATAAATTTTATTCTCTCCTCTACGTTGTTCAACATAGTACCTACCATATTAGAGATATCTATGGTATCAGGTATACTGGCCTACAAATATGGAGCACCTTTTGCATGGATTACTTCCCTGTCAGTTGCTGCATATATTGGTTTTACACTTTCTATCACACAGTGGAGGACTAAATTCAGGAAAGCCATGAATAAGGCTGATAATGACGCTAGTACTAGGGCTATTGATTCACTTATTAATTATGAGACGGTCAAATATTTCAATAATGAAGTTCACGAAACTGATCATTATGACATGTACCTAAAGAGGTATGAGGATGCTGCCCAGAAAAGCGAACAGAGTCTTGCTTTGTTGAACTTTGGTCAAACCGCTATATTTAGTACTGCTCTTTCAACAGCAATGGTTTTGTGTTCTCATGGGATCATGAATGGCACAATGACTGTTGGTGATTTGGTGATGGTAAATGGGCTTCTCTTCCAACTATCTCTTCCACTCTATTTCCTTGGTGGTGTTTATCGTGCAACTATACAAAGCCTAATCGACATGAAAGCCATGTTTCAGTTACTTGAGGAAAAAGCAGACATTAAGGATAAAGAAAATGCAAAGCCTCTAAGGTTTAATGGGGGAAAAATCCAATTTGAGAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGAATATCACTAGTTGTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCCTTCTCAGAATGCTATTCAGATTTTTTGATCCCCATTCTGGAAGTATAAAGATAGATGATCAAGATATTCGGGATGTATCCCTTGAGAGTTTACGGAAGTCTATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACGATATTTCATAACATTCACTATGGCCGGCTTTCAGCAACAGAAGAGGAGGTCTATGAAGCCGCCCGGAAAGCAGCAATCCATGACACTATCACGAGTTTTCCTGAAAAATACTCCACTGTTGTGGGAGAACGAGGGCTAAAGTTAAGTGGTGGTGAGAAACAACGTGTTTCCCTTGCTCGAGCATTCTTAAAATCACCTGCAATACTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAGTCAGTATCAACGAATCGAACTTCCATTTTCATTGCTCACAGGCTCACCACTGCAATGCAGTGTGATGAGATCATTGTTTTGGAAAATGGAAAGATGGTTGAGCATGGACCACATGAAGTGCTCTTAGCAAATGCAGGAAGATATGCACAGCTTTGGGGACAGCAAAATAACACTATTGATGCAATTGATACAGCCATCAAAGTGGGAGCATAA
Protein sequence

>Msa0814900

MMALFATPMAVLIGYGIARSGASAFNELRNALFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRTIDRGSGAINFILSSTLFNIVPTILEISMVSGILAYKYGAPFAWITSLSVAAYIGFTLSITQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNEVHETDHYDMYLKRYEDAAQKSEQSLALLNFGQTAIFSTALSTAMVLCSHGIMNGTMTVGDLVMVNGLLFQLSLPLYFLGGVYRATIQSLIDMKAMFQLLEEKADIKDKENAKPLRFNGGKIQFENVHFSYLTERKILDGISLVVPAGKSVAIVGTSGSGKSTLLRMLFRFFDPHSGSIKIDDQDIRDVSLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEAARKAAIHDTITSFPEKYSTVVGERGLKLSGGEKQRVSLARAFLKSPAILLCDEATSALDSTTEAEILSALKSVSTNRTSIFIAHRLTTAMQCDEIIVLENGKMVEHGPHEVLLANAGRYAQLWGQQNNTIDAIDTAIKVGA*