AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0698900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0698900 MtrunA17_Chr4g0052411 93.343 676 3 4 54 687 19 694 0.0 1243
Msa0698900 MtrunA17_Chr2g0297281 79.764 677 89 9 54 687 79 750 0.0 1003
Msa0698900 MtrunA17_Chr7g0217421 79.121 364 48 2 240 575 29 392 0.0 578
Msa0698900 MtrunA17_Chr3g0143721 47.972 567 248 9 137 665 139 696 4.47e-156 468
Msa0698900 MtrunA17_Chr1g0158881 45.740 446 200 6 251 670 330 759 1.57e-113 359
Msa0698900 MtrunA17_Chr7g0260601 41.199 517 241 14 210 681 203 701 3.72e-112 353
Msa0698900 MtrunA17_Chr8g0362771 44.685 461 213 9 236 667 224 671 7.06e-110 348
Msa0698900 MtrunA17_Chr4g0031821 43.805 452 208 10 250 667 320 759 9.20e-110 350
Msa0698900 MtrunA17_Chr6g0476861 40.519 501 239 12 201 665 159 636 2.80e-109 345
Msa0698900 MtrunA17_Chr3g0135721 44.519 447 210 8 248 667 222 657 5.08e-109 345
Msa0698900 MtrunA17_Chr3g0135761 44.346 451 211 8 244 667 218 655 1.80e-106 339
Msa0698900 MtrunA17_Chr7g0248361 42.163 453 212 10 250 665 192 631 8.42e-105 333
Msa0698900 MtrunA17_Chr5g0429571 45.514 457 204 10 232 644 290 745 6.27e-103 332
Msa0698900 MtrunA17_Chr5g0432631 42.637 455 220 10 243 667 220 663 2.01e-102 332
Msa0698900 MtrunA17_Chr3g0104211 42.802 514 226 15 179 639 233 731 2.98e-102 330
Msa0698900 MtrunA17_Chr3g0094871 40.402 448 213 10 250 665 11 436 4.20e-97 306
Msa0698900 MtrunA17_Chr5g0432641 39.216 459 234 10 240 666 179 624 1.33e-92 301
Msa0698900 MtrunA17_Chr8g0388371 33.333 516 265 10 233 685 387 886 1.03e-79 272
Msa0698900 MtrunA17_Chr2g0331161 36.957 460 228 10 244 665 409 844 9.28e-71 247
Msa0698900 MtrunA17_Chr1g0168321 39.244 344 182 9 250 583 164 490 5.63e-69 234
Msa0698900 MtrunA17_Chr6g0456351 47.842 278 111 5 236 482 303 577 2.40e-66 229
Msa0698900 MtrunA17_Chr3g0129971 34.686 493 252 11 211 660 265 730 3.27e-63 225
Msa0698900 MtrunA17_Chr8g0357301 32.196 469 261 11 265 679 491 956 7.21e-61 220
Msa0698900 MtrunA17_Chr5g0432391 35.537 363 196 10 318 658 78 424 1.25e-51 185
Msa0698900 MtrunA17_Chr8g0345461 34.572 269 147 3 231 470 146 414 2.63e-46 170
Msa0698900 MtrunA17_Chr1g0200081 34.572 269 146 4 231 470 156 423 1.86e-44 165
Msa0698900 MtrunA17_Chr4g0050561 35.772 246 128 2 251 466 157 402 2.36e-43 161
Msa0698900 MtrunA17_Chr3g0135781 50.867 173 59 4 236 383 42 213 6.38e-43 154
Msa0698900 MtrunA17_Chr3g0135791 35.793 271 158 4 415 683 8 264 1.09e-42 156
Msa0698900 MtrunA17_Chr1g0192151 33.456 272 152 3 231 473 148 419 1.32e-42 159
Msa0698900 MtrunA17_Chr4g0014731 33.456 272 152 3 231 473 149 420 1.69e-42 159
Msa0698900 MtrunA17_Chr7g0217411 61.682 107 41 0 565 671 6 112 1.83e-42 149
Msa0698900 MtrunA17_Chr1g0182711 34.286 245 132 2 251 466 189 433 3.34e-40 153
Msa0698900 MtrunA17_Chr7g0255651 39.301 229 110 2 250 449 282 510 5.01e-40 155
Msa0698900 MtrunA17_Chr7g0255651 33.333 231 110 7 263 460 33 252 1.02e-19 93.6
Msa0698900 MtrunA17_Chr7g0262801 34.286 245 132 2 251 466 188 432 9.42e-40 152
Msa0698900 MtrunA17_Chr2g0327121 41.071 224 106 3 250 447 207 430 4.10e-39 154
Msa0698900 MtrunA17_Chr2g0327121 35.472 265 130 5 246 471 478 740 8.95e-38 150
Msa0698900 MtrunA17_Chr7g0264521 37.662 231 113 3 246 447 477 705 4.84e-39 154
Msa0698900 MtrunA17_Chr7g0264521 40.625 224 107 4 250 447 206 429 4.20e-38 151
Msa0698900 MtrunA17_Chr1g0180791 41.071 224 106 4 250 447 205 428 1.54e-38 153
Msa0698900 MtrunA17_Chr1g0180791 37.662 231 113 3 246 447 476 704 6.39e-38 151
Msa0698900 MtrunA17_Chr2g0277831 40.851 235 103 6 242 445 527 756 2.09e-36 146
Msa0698900 MtrunA17_Chr2g0277831 38.683 243 104 5 243 448 236 470 8.83e-32 132
Msa0698900 MtrunA17_Chr7g0255691 40.529 227 106 2 250 447 286 512 4.05e-36 143
Msa0698900 MtrunA17_Chr7g0255691 34.211 228 118 7 263 461 33 257 1.23e-20 96.3
Msa0698900 MtrunA17_Chr3g0145011 35.652 230 119 3 250 450 139 368 5.06e-36 140
Msa0698900 MtrunA17_Chr3g0141901 38.725 204 103 2 269 450 162 365 6.27e-36 140
Msa0698900 MtrunA17_Chr7g0255721 36.444 225 113 4 250 445 685 908 3.47e-34 140
Msa0698900 MtrunA17_Chr7g0255721 39.487 195 94 4 276 448 417 609 3.14e-25 112
Msa0698900 MtrunA17_Chr7g0255641 34.667 225 117 4 250 445 658 881 1.54e-32 134
Msa0698900 MtrunA17_Chr7g0255641 37.368 190 93 6 282 449 432 617 2.85e-22 102
Msa0698900 MtrunA17_Chr3g0108321 39.444 180 80 2 250 400 159 338 3.69e-32 128
Msa0698900 MtrunA17_Chr4g0043381 37.220 223 108 4 252 445 839 1058 3.82e-32 134
Msa0698900 MtrunA17_Chr7g0255901 36.328 256 123 10 246 466 637 887 7.01e-32 132
Msa0698900 MtrunA17_Chr3g0086401 37.387 222 112 7 265 460 115 335 4.61e-29 123
Msa0698900 MtrunA17_Chr3g0086401 34.146 246 116 7 246 445 381 626 3.12e-28 120
Msa0698900 MtrunA17_Chr4g0004121 33.466 251 127 7 244 458 236 482 2.09e-27 117
Msa0698900 MtrunA17_Chr3g0086411 34.016 244 117 6 246 445 211 454 2.19e-27 116
Msa0698900 MtrunA17_Chr3g0086411 44.643 112 53 2 346 448 41 152 2.72e-15 79.3
Msa0698900 MtrunA17_Chr4g0038101 35.714 224 112 7 249 442 720 941 2.92e-27 118
Msa0698900 MtrunA17_Chr8g0387641 33.333 222 117 5 250 442 521 740 3.66e-27 117
Msa0698900 MtrunA17_Chr4g0047411 35.514 214 104 4 269 448 202 415 9.92e-27 115
Msa0698900 MtrunA17_Chr2g0321241 32.639 288 150 10 233 484 117 396 1.01e-26 114
Msa0698900 MtrunA17_Chr4g0033451 33.456 272 138 8 209 448 350 610 5.15e-26 114
Msa0698900 MtrunA17_Chr1g0202371 35.426 223 112 7 249 442 396 615 5.22e-26 114
Msa0698900 MtrunA17_Chr6g0462581 34.978 223 113 6 249 442 499 718 9.82e-26 113
Msa0698900 MtrunA17_Chr3g0116131 36.522 230 113 7 244 442 895 1122 1.45e-25 113
Msa0698900 MtrunA17_Chr4g0026631 31.474 251 136 8 233 453 112 356 3.29e-25 108
Msa0698900 MtrunA17_Chr1g0195741 36.161 224 111 6 249 442 937 1158 4.23e-25 111
Msa0698900 MtrunA17_Chr2g0327231 36.667 180 85 2 231 381 327 506 5.07e-25 109
Msa0698900 MtrunA17_Chr2g0327231 32.258 217 88 4 250 463 153 313 1.81e-23 104
Msa0698900 MtrunA17_Chr6g0459561 33.333 234 115 9 244 443 376 602 6.44e-25 110
Msa0698900 MtrunA17_Chr5g0397121 32.735 223 119 5 249 442 512 732 1.58e-24 109
Msa0698900 MtrunA17_Chr1g0202381 34.978 223 112 7 250 442 468 687 1.60e-24 109
Msa0698900 MtrunA17_Chr1g0190401 36.957 184 87 3 250 404 677 860 2.23e-24 109
Msa0698900 MtrunA17_Chr1g0195731 34.071 226 117 6 247 442 931 1154 3.01e-24 108
Msa0698900 MtrunA17_Chr3g0127431 34.361 227 118 7 250 447 84 308 9.16e-24 104
Msa0698900 MtrunA17_Chr1g0204031 33.333 228 115 7 250 445 557 779 3.66e-22 102
Msa0698900 MtrunA17_Chr2g0316851 33.816 207 108 5 269 448 620 824 4.39e-22 102
Msa0698900 MtrunA17_Chr3g0127401 30.662 287 153 10 250 500 81 357 1.65e-21 97.4
Msa0698900 MtrunA17_Chr7g0217431 40.268 149 75 5 102 237 46 193 3.86e-21 92.0
Msa0698900 MtrunA17_Chr7g0246111 32.599 227 123 6 249 447 211 435 9.90e-21 96.3
Msa0698900 MtrunA17_Chr6g0459541 31.008 258 114 10 244 443 36 287 1.62e-20 93.6
Msa0698900 MtrunA17_Chr4g0052271 31.818 242 121 9 246 453 117 348 2.24e-19 90.9
Msa0698900 MtrunA17_Chr3g0135741 37.121 132 82 1 415 545 6 137 2.28e-18 82.4
Msa0698900 MtrunA17_Chr2g0289231 31.739 230 117 9 247 441 294 518 6.04e-18 87.8
Msa0698900 MtrunA17_Chr6g0459551 34.737 190 89 8 244 405 96 278 3.49e-16 81.6
Msa0698900 MtrunA17_Chr5g0432671 39.048 105 59 2 421 524 2 102 2.79e-15 72.4
Msa0698900 MtrunA17_Chr8g0392971 35.052 97 61 2 431 525 51 147 3.30e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0698900 AT2G30950.1 79.674 674 82 12 51 677 13 678 0.0 1012
Msa0698900 AT2G30950.2 79.674 674 82 12 51 677 13 678 0.0 1012
Msa0698900 AT2G30950.3 79.674 674 82 12 51 677 13 678 0.0 1012
Msa0698900 AT2G30950.4 79.674 674 82 12 51 677 17 682 0.0 1012
Msa0698900 AT1G06430.1 80.120 664 81 10 62 677 11 671 0.0 994
Msa0698900 AT1G06430.3 80.120 664 81 10 62 677 11 671 0.0 994
Msa0698900 AT1G06430.2 80.120 664 81 10 62 677 11 671 0.0 994
Msa0698900 AT5G15250.1 63.553 653 186 8 69 673 24 672 0.0 813
Msa0698900 AT5G15250.2 59.267 464 117 8 97 492 55 514 2.34e-174 508
Msa0698900 AT5G42270.1 49.037 571 236 11 137 665 137 694 8.86e-159 475
Msa0698900 AT1G50250.1 48.687 571 240 12 137 665 147 706 2.31e-156 469
Msa0698900 AT2G26140.1 44.350 469 221 7 247 687 221 677 3.94e-113 357
Msa0698900 AT5G53170.1 45.556 450 202 8 243 665 351 784 3.06e-112 357
Msa0698900 AT1G07510.1 43.584 452 209 11 250 667 324 763 4.69e-109 349
Msa0698900 AT2G29080.1 43.681 451 211 11 250 667 319 759 5.65e-105 338
Msa0698900 AT3G47060.1 40.875 526 244 14 171 644 243 753 1.77e-102 331
Msa0698900 AT5G58870.1 40.000 560 259 15 179 685 254 789 2.10e-99 323
Msa0698900 AT4G23940.1 35.283 513 255 11 233 683 410 907 5.80e-81 276
Msa0698900 AT3G02450.1 52.308 260 97 4 237 469 318 577 4.52e-72 246
Msa0698900 AT3G16290.1 36.157 484 237 11 233 668 380 839 1.57e-69 244
Msa0698900 AT5G64580.1 34.304 481 255 10 235 672 297 759 1.26e-62 224
Msa0698900 AT1G79560.1 31.847 471 260 14 265 679 511 976 2.22e-56 207
Msa0698900 AT1G79560.2 31.847 471 260 14 265 679 511 976 2.26e-56 207
Msa0698900 AT1G79560.3 32.444 450 243 14 265 658 511 955 5.60e-55 203
Msa0698900 AT1G53750.1 34.572 269 147 3 231 470 146 414 4.29e-46 169
Msa0698900 AT5G19990.2 35.772 246 128 2 251 466 101 346 3.65e-43 160
Msa0698900 AT1G53780.3 33.829 269 149 3 231 470 317 585 5.82e-43 164
Msa0698900 AT1G53780.1 33.829 269 149 3 231 470 318 586 5.90e-43 164
Msa0698900 AT1G53780.4 33.829 269 149 3 231 470 318 586 5.90e-43 164
Msa0698900 AT1G53780.2 33.829 269 149 3 231 470 339 607 5.97e-43 164
Msa0698900 AT5G19990.1 35.772 246 128 2 251 466 159 404 6.25e-43 160
Msa0698900 AT5G19990.3 35.772 246 128 2 251 466 159 404 6.25e-43 160
Msa0698900 AT5G20000.1 35.772 246 128 2 251 466 159 404 6.69e-43 160
Msa0698900 AT3G05530.1 33.456 272 152 3 231 473 149 420 1.22e-42 160
Msa0698900 AT1G09100.1 33.088 272 153 3 231 473 148 419 1.25e-41 157
Msa0698900 AT5G58290.1 35.983 239 124 2 250 459 152 390 9.97e-40 151
Msa0698900 AT4G29040.1 33.469 245 134 2 251 466 186 430 7.89e-39 149
Msa0698900 AT3G09840.1 40.417 240 115 5 250 463 204 441 9.18e-39 154
Msa0698900 AT3G09840.1 38.362 232 111 4 246 447 475 704 5.03e-34 139
Msa0698900 AT5G03340.1 40.417 240 115 5 250 463 204 441 1.30e-38 153
Msa0698900 AT5G03340.1 37.662 231 113 3 246 447 475 703 1.27e-37 150
Msa0698900 AT2G20140.1 35.193 233 122 2 251 454 186 418 1.74e-38 149
Msa0698900 AT3G53230.1 37.662 231 113 3 246 447 476 704 4.38e-38 152
Msa0698900 AT3G53230.1 40.179 224 108 4 250 447 205 428 2.58e-37 149
Msa0698900 AT1G45000.1 39.216 204 102 2 269 450 162 365 1.91e-36 142
Msa0698900 AT5G43010.1 38.725 204 103 2 269 450 162 365 2.60e-36 141
Msa0698900 AT3G56690.1 37.946 224 111 4 250 445 721 944 8.16e-36 145
Msa0698900 AT3G56690.1 36.598 194 103 2 275 448 413 606 1.46e-28 122
Msa0698900 AT5G08470.1 38.565 223 105 4 252 445 843 1062 3.28e-33 137
Msa0698900 AT5G08470.3 38.565 223 105 4 252 445 834 1053 3.72e-33 137
Msa0698900 AT1G03000.1 35.036 274 136 10 246 482 653 921 2.01e-31 131
Msa0698900 AT2G03670.1 39.035 228 109 5 250 447 283 510 3.72e-31 129
Msa0698900 AT2G03670.1 31.556 225 129 3 269 468 45 269 2.72e-21 99.0
Msa0698900 AT3G01610.2 37.551 245 111 8 242 449 222 461 6.03e-31 130
Msa0698900 AT3G01610.2 37.500 240 120 6 233 445 510 746 4.19e-26 114
Msa0698900 AT3G01610.1 37.551 245 111 8 242 449 222 461 6.46e-31 130
Msa0698900 AT3G01610.1 37.500 240 120 6 233 445 510 746 3.95e-26 115
Msa0698900 AT1G05910.1 32.353 272 152 6 247 486 375 646 1.79e-29 125
Msa0698900 AT1G64110.2 33.471 242 127 6 249 461 517 753 2.15e-27 119
Msa0698900 AT1G64110.4 33.471 242 127 6 249 461 517 753 2.15e-27 119
Msa0698900 AT1G64110.5 33.471 242 127 6 249 461 515 751 2.19e-27 119
Msa0698900 AT1G64110.3 33.471 242 127 6 249 461 515 751 2.19e-27 119
Msa0698900 AT1G64110.1 33.471 242 127 6 249 461 512 748 2.48e-27 118
Msa0698900 AT1G50140.2 35.268 224 113 7 249 442 688 909 7.26e-27 117
Msa0698900 AT1G50140.5 35.268 224 113 7 249 442 688 909 7.26e-27 117
Msa0698900 AT1G80350.1 34.921 252 122 9 244 458 230 476 7.40e-27 115
Msa0698900 AT1G50140.3 35.268 224 113 7 249 442 710 931 8.22e-27 117
Msa0698900 AT1G50140.1 35.268 224 113 7 249 442 710 931 8.22e-27 117
Msa0698900 AT1G50140.4 35.268 224 113 7 249 442 710 931 8.22e-27 117
Msa0698900 AT4G28000.1 34.081 223 115 6 249 442 514 733 1.11e-26 116
Msa0698900 AT4G28000.2 34.081 223 115 6 249 442 516 735 1.13e-26 116
Msa0698900 AT4G28000.3 34.081 223 115 6 249 442 516 735 1.37e-26 116
Msa0698900 AT4G04910.1 35.514 214 104 4 269 448 239 452 2.02e-26 115
Msa0698900 AT3G19740.1 34.263 251 123 8 232 442 673 921 7.18e-26 114
Msa0698900 AT3G04340.1 24.219 512 287 13 247 667 778 1279 4.30e-25 112
Msa0698900 AT4G02480.1 35.398 226 114 6 247 442 957 1180 5.22e-25 112
Msa0698900 AT5G52882.1 33.632 223 116 6 249 442 513 732 1.54e-24 109
Msa0698900 AT1G02890.1 35.065 231 118 6 247 447 938 1166 3.88e-24 108
Msa0698900 AT1G02890.2 36.493 211 114 5 247 447 938 1138 3.90e-24 108
Msa0698900 AT3G15120.2 32.900 231 119 6 252 448 728 956 3.06e-23 106
Msa0698900 AT3G15120.1 32.900 231 119 6 252 448 718 946 3.36e-23 106
Msa0698900 AT3G27120.1 33.051 236 113 9 244 443 394 620 4.36e-23 105
Msa0698900 AT2G27600.1 32.189 233 122 8 233 435 114 340 6.45e-23 102
Msa0698900 AT4G27680.1 30.112 269 149 9 247 478 78 344 9.14e-23 101
Msa0698900 AT2G34560.1 32.479 234 121 8 247 448 97 325 3.10e-22 99.8
Msa0698900 AT2G34560.2 32.479 234 121 8 247 448 106 334 3.97e-22 99.8
Msa0698900 AT2G45500.4 32.314 229 121 7 249 447 79 303 6.01e-22 98.6
Msa0698900 AT2G45500.3 32.314 229 121 7 249 447 79 303 6.01e-22 98.6
Msa0698900 AT4G24860.3 34.081 223 115 6 250 442 815 1035 6.52e-22 102
Msa0698900 AT4G24860.1 34.081 223 115 6 250 442 817 1037 6.64e-22 102
Msa0698900 AT4G24860.2 34.081 223 115 6 250 442 813 1033 9.53e-22 101
Msa0698900 AT4G24860.4 34.081 223 115 6 250 442 790 1010 9.66e-22 101
Msa0698900 AT2G03670.2 31.556 225 129 3 269 468 45 269 1.11e-21 99.0
Msa0698900 AT2G45500.2 32.314 229 121 7 249 447 212 436 1.68e-21 99.0
Msa0698900 AT2G45500.1 32.314 229 121 7 249 447 216 440 1.87e-21 99.0
Msa0698900 AT2G45500.5 32.314 229 121 7 249 447 222 446 2.11e-21 98.6
Msa0698900 AT1G62130.1 33.755 237 113 9 249 457 749 969 5.39e-21 99.0
Msa0698900 AT1G62130.2 33.755 237 113 9 249 457 742 962 7.52e-21 98.6
Msa0698900 AT5G53540.1 33.040 227 121 7 250 447 84 308 1.27e-20 95.1
Msa0698900 AT4G04180.2 31.278 227 116 9 250 441 311 532 2.73e-19 92.8
Msa0698900 AT4G04180.1 31.278 227 116 9 250 441 316 537 3.10e-19 92.4
Msa0698900 AT5G08470.2 33.108 148 67 4 252 370 843 987 5.31e-13 73.2
Msa0698900 AT1G45000.2 36.283 113 50 2 269 359 162 274 1.31e-12 70.1

Find 207 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGACCAGTTACGATTAA+TGG 0.161658 4_4:+69346345 None:intergenic
TGTTGGTTTGCCGGCATTAT+TGG 0.190374 4_4:-69349212 Msa0698900:CDS
CTTGGCCAACAAAGTCTTTC+CGG 0.230399 4_4:+69348607 None:intergenic
TATTGGTCCTTGGTCACTTA+TGG 0.235513 4_4:-69346905 Msa0698900:CDS
GTTGAGATGTTTGTTGGTAT+TGG 0.265499 4_4:-69348530 Msa0698900:CDS
AACAAAGTCTTTCCGGTTCC+TGG 0.267110 4_4:+69348614 None:intergenic
GCAAGAATTGTTGGAGGATT+AGG 0.268443 4_4:-69347461 Msa0698900:CDS
CTGAAATTCCAGTTGAAAAT+CGG 0.283840 4_4:-69346648 Msa0698900:CDS
TGCAACCTATTTCCCAATTC+AGG 0.285706 4_4:+69349043 None:intergenic
AGCATGAACCTTTAGGATTT+CGG 0.289530 4_4:+69348035 None:intergenic
ACATTTGGAATGTCTGATAT+TGG 0.298060 4_4:-69346922 Msa0698900:CDS
TGAGGCTGTGTCTCCTGAAT+TGG 0.304859 4_4:-69349056 Msa0698900:CDS
AAGAGCTTCTTCAGAAATTC+AGG 0.309999 4_4:-69348988 Msa0698900:CDS
TAAGATTGTGGAAGTCCTTC+TGG 0.311011 4_4:-69346722 Msa0698900:CDS
GCTTTCCCTGCTGCTGTCAT+TGG 0.314297 4_4:-69348887 Msa0698900:CDS
TGTCTCCTGAATTGGGAAAT+AGG 0.315118 4_4:-69349048 Msa0698900:CDS
CAACTCTTTGCAAGAATTGT+TGG 0.316556 4_4:-69347470 Msa0698900:CDS
CGTGTTCGAGTTCAACTTCC+TGG 0.320835 4_4:-69349019 Msa0698900:CDS
GTTGGTTTGCCGGCATTATT+GGG 0.322430 4_4:-69349211 Msa0698900:CDS
TATTGTTAGCATGAACCTTT+AGG 0.322618 4_4:+69348028 None:intergenic
TTGTTGTTGCTGCAACTAAC+AGG 0.324289 4_4:-69348219 Msa0698900:CDS
ATAGAATCGTCAATCTCTTT+AGG 0.345992 4_4:+69347874 None:intergenic
CTCGAGGCGGTCCGGTGGAA+TGG 0.358005 4_4:-69348849 Msa0698900:intron
TTGTTGGCCAAGGCTATTGC+TGG 0.358387 4_4:-69348596 Msa0698900:CDS
AAATGTCGGTGTTGGTTTGC+CGG 0.361800 4_4:-69349221 Msa0698900:CDS
TTGCAGATGGTAGTCACATT+TGG 0.362813 4_4:-69346937 Msa0698900:intron
CCAAAAGGAGTTCTTCTTGT+TGG 0.368691 4_4:-69348641 Msa0698900:CDS
TCGAGGCGGTCCGGTGGAAT+GGG 0.369632 4_4:-69348848 Msa0698900:intron
TACATACAGGCCATTCAAAC+AGG 0.371825 4_4:+69346598 None:intergenic
CCAACAAGAAGAACTCCTTT+TGG 0.377297 4_4:+69348641 None:intergenic
TCGGTCCTTCCCCTTACATC+TGG 0.380555 4_4:+69348054 None:intergenic
AACAAGCCATTAATCGTAAC+TGG 0.381567 4_4:-69346351 Msa0698900:three_prime_UTR
ATTAATCGTAACTGGTCAAT+AGG 0.383190 4_4:-69346343 Msa0698900:three_prime_UTR
AGATTGACGATTCTATTGAT+AGG 0.384128 4_4:-69347867 Msa0698900:CDS
GTTCTTCTTGTTGGTCCTCC+AGG 0.385102 4_4:-69348632 Msa0698900:CDS
TCTATTGATAGGATTGTTGC+TGG 0.387609 4_4:-69347856 Msa0698900:CDS
CGGTTGATGTTCCAGATGTA+AGG 0.391954 4_4:-69348065 Msa0698900:CDS
AAACCTCGAATACGACATTC+TGG 0.396169 4_4:+69349147 None:intergenic
AGACAAAGAGGGACAGGAAT+TGG 0.397460 4_4:-69348322 Msa0698900:CDS
CTTGTTGGTCCTCCAGGAAC+CGG 0.397932 4_4:-69348626 Msa0698900:CDS
TCAAAAGTCACTCCAGTGTT+TGG 0.403653 4_4:+69348761 None:intergenic
TCATAATGCTCAAGAAGATT+CGG 0.406140 4_4:-69348942 Msa0698900:CDS
TTGCCGGCATTATTGGGAAA+TGG 0.408701 4_4:-69349205 Msa0698900:CDS
GAGTTTGTTGAGATGTTTGT+TGG 0.409307 4_4:-69348536 Msa0698900:CDS
TGAAATTCCAGTTGAAAATC+GGG 0.410824 4_4:-69346647 Msa0698900:CDS
TGACTGGCCTAGCCTACTTC+AGG 0.414328 4_4:-69346303 Msa0698900:three_prime_UTR
CAAGTGGATTTATGAAGGAT+TGG 0.414714 4_4:+69349859 None:intergenic
ATTCAAACAGGGACTGCTAC+TGG 0.418905 4_4:+69346610 None:intergenic
GTTTGGTTCCATTTGAAACT+TGG 0.424898 4_4:+69348778 None:intergenic
ATGGGAGGTCCCGGTGGACC+TGG 0.430906 4_4:-69348830 Msa0698900:CDS
GCTAATTTCTTACCCACAAA+TGG 0.431722 4_4:+69347765 None:intergenic
TTCTGTCAAAAGTTGGTTGA+GGG 0.432083 4_4:+69348273 None:intergenic
CGTCCATTTCTGTCAAAAGT+TGG 0.434164 4_4:+69348266 None:intergenic
AATTACCTGTCTTGCTATAC+CGG 0.437039 4_4:+69347361 None:intergenic
CCTGGATTTCCTATGCAATT+CGG 0.441651 4_4:-69348812 Msa0698900:CDS
TTCCTTCTCTCGAGGCGGTC+CGG 0.442619 4_4:-69348857 Msa0698900:intron
ATTCTCATATAGATCAACTT+TGG 0.444406 4_4:+69349096 None:intergenic
TCCGGTGGAATGGGAGGTCC+CGG 0.451748 4_4:-69348839 Msa0698900:CDS
GACAGAAATGGACGGATTTG+AGG 0.452499 4_4:-69348257 Msa0698900:CDS
CATAATGCTCAAGAAGATTC+GGG 0.453447 4_4:-69348941 Msa0698900:CDS
AAGTGATGATGAAGAAGAGT+TGG 0.454350 4_4:+69349827 None:intergenic
GAGGCTGTGTCTCCTGAATT+GGG 0.454840 4_4:-69349055 Msa0698900:CDS
AAATGTGAGAGAAGAATGTA+TGG 0.456699 4_4:+69349772 None:intergenic
AAGTGGATTTATGAAGGATT+GGG 0.460665 4_4:+69349860 None:intergenic
ATCTAAAGCCAAGTTTCAAA+TGG 0.460715 4_4:-69348786 Msa0698900:CDS
ACTCTTAGTAAGGATTTGAA+TGG 0.462643 4_4:-69349373 Msa0698900:CDS
AGCAACAAGTGGATTTATGA+AGG 0.464258 4_4:+69349854 None:intergenic
AAGGCTATTGCTGGTGAAGC+GGG 0.464510 4_4:-69348587 Msa0698900:CDS
AGTAGCAGTCCCTGTTTGAA+TGG 0.465711 4_4:-69346608 Msa0698900:exon
TTCATACCTGTCTATCGAAT+CGG 0.467588 4_4:+69348161 None:intergenic
TTGTTGGAGGATTAGGTGGT+AGG 0.468049 4_4:-69347454 Msa0698900:CDS
GCTGGTCGGCGAGGAAGGAC+AGG 0.470330 4_4:-69347904 Msa0698900:CDS
GGGACTGCTACTGGAGTTGA+AGG 0.470521 4_4:+69346619 None:intergenic
CCTCCAGAATGTCGTATTCG+AGG 0.470895 4_4:-69349150 Msa0698900:intron
CTCTTTGCAAGAATTGTTGG+AGG 0.472097 4_4:-69347467 Msa0698900:CDS
CCTGAGAGGTTCACTTCTGT+TGG 0.472869 4_4:-69348674 Msa0698900:CDS
CGTAACTGGTCAATAGGAAT+GGG 0.473293 4_4:-69346337 Msa0698900:three_prime_UTR
GGTGAGCCTGAGGTTACAAC+TGG 0.473700 4_4:-69347410 Msa0698900:CDS
AATGAAGCTGCTATATTAGC+TGG 0.476361 4_4:-69347922 Msa0698900:CDS
GGTTGCAGAACTTTGACTCC+TGG 0.477393 4_4:-69347593 Msa0698900:intron
ACAGAAATGGACGGATTTGA+GGG 0.478098 4_4:-69348256 Msa0698900:CDS
CGCTTCACCAGCAATAGCCT+TGG 0.481050 4_4:+69348589 None:intergenic
TCGTAACTGGTCAATAGGAA+TGG 0.481659 4_4:-69346338 Msa0698900:three_prime_UTR
TGATAGGATTGTTGCTGGAA+TGG 0.483816 4_4:-69347851 Msa0698900:CDS
GAATGTCTGATATTGGTCCT+TGG 0.484443 4_4:-69346915 Msa0698900:CDS
TGGTCATGATGCGGTACAAA+AGG 0.488639 4_4:-69347573 Msa0698900:CDS
AAAATCAGCAGGAAGGAAGA+AGG 0.491252 4_4:-69349267 Msa0698900:CDS
TGGTCAATAGGAATGGGAAT+AGG 0.493408 4_4:-69346331 Msa0698900:three_prime_UTR
AGGAACCGGAAAGACTTTGT+TGG 0.495055 4_4:-69348612 Msa0698900:CDS
GCATAATGAAGAGGGTAACT+TGG 0.497705 4_4:+69346542 None:intergenic
GGGATTCTGAAATTGTTGCT+TGG 0.498266 4_4:-69349244 Msa0698900:CDS
CCAACAGAAGTGAACCTCTC+AGG 0.499924 4_4:+69348674 None:intergenic
TGAATTTCTGAAGAAGCTCT+TGG 0.500518 4_4:+69348990 None:intergenic
AATACACCAATGACAGCAGC+AGG 0.500849 4_4:+69348881 None:intergenic
AGTTCCTCGAGGTCAAGCTC+GGG 0.500879 4_4:-69347543 Msa0698900:CDS
GCTTAACTTGAGCCTGAAGT+AGG 0.504002 4_4:+69346291 None:intergenic
TGGGAAGAGCAAAAGTTTAG+TGG 0.504719 4_4:-69347809 Msa0698900:CDS
CACCTCCATAAAATCCTGCT+TGG 0.506645 4_4:+69348715 None:intergenic
TAATAGGACTACTCTTAGTA+AGG 0.510303 4_4:-69349383 Msa0698900:intron
AAAGTTGATCTATATGAGAA+TGG 0.514012 4_4:-69349094 Msa0698900:CDS
TGTTGGAGGATTAGGTGGTA+GGG 0.515767 4_4:-69347453 Msa0698900:CDS
GTTGGTGCTCGCATTCCAAA+AGG 0.518433 4_4:-69348656 Msa0698900:CDS
TTTCCATTTCCCAATAATGC+CGG 0.518756 4_4:+69349202 None:intergenic
TAGTTCCTCGAGGTCAAGCT+CGG 0.519211 4_4:-69347544 Msa0698900:CDS
ACCAGGCCGATTCGATAGAC+AGG 0.519780 4_4:-69348167 Msa0698900:intron
GTCAAGCTCGGGGTCTTACA+TGG 0.521459 4_4:-69347532 Msa0698900:CDS
GACTCTGCGTTATTGAGACC+AGG 0.523124 4_4:-69348184 Msa0698900:CDS
ATCCTTGGAACAAAATCAGC+AGG 0.523200 4_4:-69349278 Msa0698900:CDS
CGGAAAGACTTTGTTGGCCA+AGG 0.524052 4_4:-69348606 Msa0698900:CDS
TATTAGCTGGTCGGCGAGGA+AGG 0.526217 4_4:-69347909 Msa0698900:CDS
ATTATAAAATAACTACATAC+AGG 0.527606 4_4:+69346585 None:intergenic
CCGAATTGCATAGGAAATCC+AGG 0.528602 4_4:+69348812 None:intergenic
TGGGGTGGATGAAGCCAAGC+AGG 0.530470 4_4:-69348729 Msa0698900:CDS
AAATCAGCAGGAAGGAAGAA+GGG 0.532430 4_4:-69349266 Msa0698900:CDS
TTGCTTGGAAATGTCGGTGT+TGG 0.533808 4_4:-69349229 Msa0698900:CDS
AGAGCTTCTTCAGAAATTCA+GGG 0.534293 4_4:-69348987 Msa0698900:CDS
ATGGGAATAGGCGAGATGAC+TGG 0.534918 4_4:-69346319 Msa0698900:three_prime_UTR
AGATGTATTGAAACAAACTC+TGG 0.535399 4_4:+69346414 None:intergenic
GCTTATGCTGCTGATGAACA+AGG 0.536032 4_4:-69349178 Msa0698900:CDS
AGAGGGACAGGAATTGGTGG+AGG 0.538307 4_4:-69348316 Msa0698900:CDS
TTAGTGGCATATCATGAAGT+TGG 0.538933 4_4:-69347793 Msa0698900:CDS
CATAGGAAATCCAGGTCCAC+CGG 0.540380 4_4:+69348820 None:intergenic
GTTGGAAGACAAAGAGGGAC+AGG 0.541174 4_4:-69348328 Msa0698900:intron
GAAGGAACATTAATGACCGA+TGG 0.543574 4_4:-69347829 Msa0698900:CDS
TTTCTGTCAAAAGTTGGTTG+AGG 0.544666 4_4:+69348272 None:intergenic
GAAGGATTGGGTGTGGCTAG+AGG 0.545144 4_4:+69349872 None:intergenic
TAGCCTTCTTGAACAAATCA+CGG 0.545212 4_4:+69348495 None:intergenic
ACCTGTCTATCGAATCGGCC+TGG 0.545246 4_4:+69348166 None:intergenic
GACGGATTTGAGGGTAATAC+CGG 0.545337 4_4:-69348247 Msa0698900:CDS
AGGCGGTCCGGTGGAATGGG+AGG 0.546632 4_4:-69348845 Msa0698900:CDS
GGTTGATGTTCCAGATGTAA+GGG 0.547060 4_4:-69348064 Msa0698900:CDS
AGATCAGCTCCGCTGAAACC+AGG 0.547210 4_4:+69347958 None:intergenic
TTAGATTGACCGAATTGCAT+AGG 0.547275 4_4:+69348803 None:intergenic
TGTGGAAGTCCTTCTGGAGA+AGG 0.550581 4_4:-69346716 Msa0698900:CDS
AATCACCGGTATAGCAAGAC+AGG 0.551889 4_4:-69347366 Msa0698900:intron
GAAGTTGGTCATGCCATTTG+TGG 0.552290 4_4:-69347778 Msa0698900:CDS
CAAAGAGGGACAGGAATTGG+TGG 0.553090 4_4:-69348319 Msa0698900:CDS
GAGTTGGAGTTAGCAACAAG+TGG 0.556628 4_4:+69349843 None:intergenic
ACCGGGACCTCCCATTCCAC+CGG 0.558678 4_4:+69348838 None:intergenic
CTTCTCTCGAGGCGGTCCGG+TGG 0.561799 4_4:-69348854 Msa0698900:intron
TTTCAAATGGAACCAAACAC+TGG 0.563173 4_4:-69348773 Msa0698900:CDS
TGAGATCAGAGTTGGGTCAT+CGG 0.563203 4_4:+69347499 None:intergenic
CAAGGCTATTGCTGGTGAAG+CGG 0.563818 4_4:-69348588 Msa0698900:CDS
ACTTGAGCCTGAAGTAGGCT+AGG 0.564326 4_4:+69346296 None:intergenic
AAGTTGGTCATGCCATTTGT+GGG 0.566271 4_4:-69347777 Msa0698900:intron
AGAAGCTCTTGGCTAAGTCC+AGG 0.571364 4_4:+69349001 None:intergenic
ATCAGAGTTGGGTCATCGGA+AGG 0.574711 4_4:+69347503 None:intergenic
CACAGCCTCAACAATAGCTA+TGG 0.575621 4_4:+69349069 None:intergenic
GGGAAGGACCGAAATCCTAA+AGG 0.575874 4_4:-69348043 Msa0698900:CDS
CCTGAGGTTACAACTGGTGC+AGG 0.577792 4_4:-69347404 Msa0698900:CDS
GGTGATTTGCAGCAAATCAC+CGG 0.580836 4_4:-69347380 Msa0698900:CDS
AGGATTGTTGCTGGAATGGA+AGG 0.581374 4_4:-69347847 Msa0698900:CDS
GTGAGAGAAGAATGTATGGA+AGG 0.584999 4_4:+69349776 None:intergenic
GACGCTGTTGGAAGACAAAG+AGG 0.585021 4_4:-69348334 Msa0698900:intron
CGATGTTATCATGAGAATGA+TGG 0.588855 4_4:-69346863 Msa0698900:CDS
AGAATTGTTGGAGGATTAGG+TGG 0.589670 4_4:-69347458 Msa0698900:CDS
CCTGCACCAGTTGTAACCTC+AGG 0.590727 4_4:+69347404 None:intergenic
TGTTGTTGCTGCAACTAACA+GGG 0.592269 4_4:-69348218 Msa0698900:CDS
AATTTGAAGCATAATGAAGA+GGG 0.592978 4_4:+69346534 None:intergenic
TTCCTCTGCACTGCACTCAG+AGG 0.596377 4_4:-69349805 Msa0698900:CDS
CAATCTTATCAATTGCCTCA+CGG 0.597266 4_4:+69346737 None:intergenic
GGTGGAATGGGAGGTCCCGG+TGG 0.599843 4_4:-69348836 Msa0698900:CDS
AAATTGCATTGACACAGATA+AGG 0.602585 4_4:-69346765 Msa0698900:CDS
ATAGGAAATCCAGGTCCACC+GGG 0.605635 4_4:+69348821 None:intergenic
CTGGAGAAGGAGACATTGAG+TGG 0.609730 4_4:-69346703 Msa0698900:CDS
AATCAGCAGGAAGGAAGAAG+GGG 0.612772 4_4:-69349265 Msa0698900:CDS
TGAGGCAATTGATAAGATTG+TGG 0.614636 4_4:-69346734 Msa0698900:CDS
AACCTCTGAGTGCAGTGCAG+AGG 0.616661 4_4:+69349803 None:intergenic
AAATTGTTGCTTGGAAATGT+CGG 0.619146 4_4:-69349235 Msa0698900:CDS
GAGGGACAGGAATTGGTGGA+GGG 0.622613 4_4:-69348315 Msa0698900:CDS
AAATTTGAAGCATAATGAAG+AGG 0.624871 4_4:+69346533 None:intergenic
ATGAGAACACCTGGTTTCAG+CGG 0.626005 4_4:-69347967 Msa0698900:CDS
TTATCATGAGAATGATGGCA+AGG 0.626312 4_4:-69346858 Msa0698900:CDS
TCAATGTCTCCTTCTCCAGA+AGG 0.626501 4_4:+69346707 None:intergenic
AAGGAACATTAATGACCGAT+GGG 0.627659 4_4:-69347828 Msa0698900:CDS
GATTTATGAAGGATTGGGTG+TGG 0.627688 4_4:+69349865 None:intergenic
ATGTTCCAGATGTAAGGGGA+AGG 0.629803 4_4:-69348059 Msa0698900:CDS
CTGGTCGGCGAGGAAGGACA+GGG 0.631120 4_4:-69347903 Msa0698900:CDS
TAACGCAGAGTCAAGAATGT+CGG 0.631624 4_4:+69348195 None:intergenic
AATTTCTCAAGAAGCCTGAG+AGG 0.635500 4_4:-69348688 Msa0698900:intron
GTGATTGCAATGAGAACACC+TGG 0.637344 4_4:-69347976 Msa0698900:CDS
AAGCTGCTATATTAGCTGGT+CGG 0.645613 4_4:-69347918 Msa0698900:CDS
TTGGAACAAAATCAGCAGGA+AGG 0.651292 4_4:-69349274 Msa0698900:CDS
GAGGTTACAACTGGTGCAGG+TGG 0.653393 4_4:-69347401 Msa0698900:CDS
ACTGCTACTGGAGTTGAAGG+AGG 0.656492 4_4:+69346622 None:intergenic
AAAGTCTTTCCGGTTCCTGG+AGG 0.658551 4_4:+69348617 None:intergenic
GTTGATGTTCCAGATGTAAG+GGG 0.661366 4_4:-69348063 Msa0698900:CDS
AGACCCCGAGCTTGACCTCG+AGG 0.661905 4_4:+69347539 None:intergenic
CTTATGCTGCTGATGAACAA+GGG 0.662325 4_4:-69349177 Msa0698900:CDS
GACGAGTCCATAAGTGACCA+AGG 0.664033 4_4:+69346898 None:intergenic
GTTCCTCGAGGTCAAGCTCG+GGG 0.664861 4_4:-69347542 Msa0698900:CDS
TGGAACCATAGCTATTGTTG+AGG 0.667930 4_4:-69349074 Msa0698900:CDS
TGCAGCAACAACAATGACAC+CGG 0.667957 4_4:+69348228 None:intergenic
GCTATATTAGCTGGTCGGCG+AGG 0.669032 4_4:-69347913 Msa0698900:CDS
ACATACAGGCCATTCAAACA+GGG 0.675696 4_4:+69346599 None:intergenic
TTTGACTCCTGGTCATGATG+CGG 0.676383 4_4:-69347582 Msa0698900:CDS
ATGGACTCGTCAGCACAAAG+TGG 0.693906 4_4:-69346886 Msa0698900:CDS
ATCTGACAATCTCTTGACAG+CGG 0.699497 4_4:+69346798 None:intergenic
ACGCTGTTGGAAGACAAAGA+GGG 0.714582 4_4:-69348333 Msa0698900:intron
ACGTTAATAGAAAGCCACGT+AGG 0.716810 4_4:-69349899 Msa0698900:intron
ATCAGCAGGAAGGAAGAAGG+GGG 0.718080 4_4:-69349264 Msa0698900:CDS
TAAACTCTGACAGTAGAGCG+CGG 0.727648 4_4:+69346671 None:intergenic
ATACACCAATGACAGCAGCA+GGG 0.728875 4_4:+69348882 None:intergenic
TGGCTAGAGGAAGACCTACG+TGG 0.731437 4_4:+69349885 None:intergenic
AAGGTGACATTAGTTCCTCG+AGG 0.734920 4_4:-69347554 Msa0698900:CDS
CCTCGAATACGACATTCTGG+AGG 0.741604 4_4:+69349150 None:intergenic
ACAGATAAGGAACAACCGTG+AGG 0.756868 4_4:-69346752 Msa0698900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTAAGAAGTAAAAA+TGG - chr4_4:69346750-69346769 Msa0698900:CDS 10.0%
!! AACAAATAATACTAATAATT+TGG - chr4_4:69347146-69347165 Msa0698900:intron 10.0%
!! ACAAATAATACTAATAATTT+GGG - chr4_4:69347147-69347166 Msa0698900:intron 10.0%
!!! TTATACTATTTTTTTTCTTT+CGG + chr4_4:69347203-69347222 None:intergenic 10.0%
!! TAAAAAATATTAGCGAAATA+TGG - chr4_4:69346708-69346727 Msa0698900:CDS 15.0%
!! ACAAAAAACTCATATATTTA+AGG - chr4_4:69346906-69346925 Msa0698900:CDS 15.0%
!!! ATTTGTTTGATTTTTATTCA+CGG + chr4_4:69347133-69347152 None:intergenic 15.0%
!! CAAATAATACTAATAATTTG+GGG - chr4_4:69347148-69347167 Msa0698900:intron 15.0%
!! GAAATTACTAAAAATAATGA+AGG + chr4_4:69347503-69347522 None:intergenic 15.0%
!!! TTCTTTTTAGTTGTATATTA+TGG - chr4_4:69347524-69347543 Msa0698900:CDS 15.0%
!! AATATAAATCTACAAAAAAG+AGG + chr4_4:69347567-69347586 None:intergenic 15.0%
!! AACTAATTATATGTTTAACA+GGG + chr4_4:69347665-69347684 None:intergenic 15.0%
!!! ATTTTCATCATTCAATAATA+AGG - chr4_4:69347831-69347850 Msa0698900:CDS 15.0%
!! GTATGAATATGATTATATTA+CGG - chr4_4:69349012-69349031 Msa0698900:CDS 15.0%
!! TAATCATTCATAAACATATA+AGG + chr4_4:69349042-69349061 None:intergenic 15.0%
!! AAATAAAAGGAAGAAAAAAT+AGG + chr4_4:69349853-69349872 None:intergenic 15.0%
!! TTCCTAAAAAAAATAGTTAA+AGG + chr4_4:69349995-69350014 None:intergenic 15.0%
!! AATCAAAAGATATTATTGTA+AGG + chr4_4:69350152-69350171 None:intergenic 15.0%
!! ATTATAAAATAACTACATAC+AGG + chr4_4:69350575-69350594 None:intergenic 15.0%
!! TTAAAGTCTAATCTAATTCT+TGG - chr4_4:69346326-69346345 Msa0698900:three_prime_UTR 20.0%
!! ATTAAAATGGAATTTGGAAA+AGG + chr4_4:69346485-69346504 None:intergenic 20.0%
!! GTTCAAATTAAAATGGAATT+TGG + chr4_4:69346491-69346510 None:intergenic 20.0%
!!! TCCATTTTTTCTTCTTATTT+TGG - chr4_4:69346561-69346580 Msa0698900:three_prime_UTR 20.0%
!! ACCAAAATAAGAAGAAAAAA+TGG + chr4_4:69346565-69346584 None:intergenic 20.0%
!!! TGAGTTTTTTGTCAAAATTA+CGG + chr4_4:69346898-69346917 None:intergenic 20.0%
!! AAAACTCATATATTTAAGGA+TGG - chr4_4:69346910-69346929 Msa0698900:CDS 20.0%
!!! AAAGAGGTTTTTAGATTAAA+GGG + chr4_4:69347551-69347570 None:intergenic 20.0%
!!! AAAAGAGGTTTTTAGATTAA+AGG + chr4_4:69347552-69347571 None:intergenic 20.0%
!! AATTAATTTACAACCACAAT+TGG - chr4_4:69347627-69347646 Msa0698900:intron 20.0%
!! GAAATAAATAAATCCAATTG+TGG + chr4_4:69347643-69347662 None:intergenic 20.0%
!! CAACTAATTATATGTTTAAC+AGG + chr4_4:69347666-69347685 None:intergenic 20.0%
!! AAGATTAAGACTTCATAATT+TGG - chr4_4:69347695-69347714 Msa0698900:intron 20.0%
!!! TTTTCATGCTACAAAATAAA+AGG + chr4_4:69349866-69349885 None:intergenic 20.0%
!! TAGATACAACTACAATTAAT+TGG - chr4_4:69349928-69349947 Msa0698900:intron 20.0%
!!! TGCCTTTAACTATTTTTTTT+AGG - chr4_4:69349990-69350009 Msa0698900:intron 20.0%
!! AAGATATTATTGTAAGGAAT+AGG + chr4_4:69350146-69350165 None:intergenic 20.0%
!!! GAAATTTTTCGATGCTTATA+TGG - chr4_4:69346455-69346474 Msa0698900:three_prime_UTR 25.0%
! TTTAGTTGCATATACTTCAT+AGG + chr4_4:69346692-69346711 None:intergenic 25.0%
! TGATGTCTTAATACTTAGTT+TGG - chr4_4:69346971-69346990 Msa0698900:intron 25.0%
!!! TTGATCTTTTTTCATGTTGA+TGG - chr4_4:69347038-69347057 Msa0698900:intron 25.0%
!!! TCTCTCACATTTTACTTTTA+AGG - chr4_4:69347396-69347415 Msa0698900:CDS 25.0%
! ATTCTCATATAGATCAACTT+TGG + chr4_4:69348064-69348083 None:intergenic 25.0%
!! AAAGTTGATCTATATGAGAA+TGG - chr4_4:69348063-69348082 Msa0698900:CDS 25.0%
!!! TCTCTTTTGTTTAATCTCAT+TGG - chr4_4:69348240-69348259 Msa0698900:CDS 25.0%
!!! CTCTTTTGTTTAATCTCATT+GGG - chr4_4:69348241-69348260 Msa0698900:CDS 25.0%
! NNNNNNNCAAAGACAATGCA+AGG + chr4_4:69348699-69348718 None:intergenic 25.0%
! TTGTAACATCTATTTGTACT+TGG - chr4_4:69349543-69349562 Msa0698900:intron 25.0%
! AAAAAATAGGAGATATGATG+CGG + chr4_4:69349840-69349859 None:intergenic 25.0%
! CATTGAAGAAATCATATGAT+TGG + chr4_4:69349972-69349991 None:intergenic 25.0%
! AGGAAACCAAATATAGTATA+AGG - chr4_4:69350047-69350066 Msa0698900:intron 25.0%
! CAAGTTCCTTATACTATATT+TGG + chr4_4:69350056-69350075 None:intergenic 25.0%
! CAAATATAGTATAAGGAACT+TGG - chr4_4:69350054-69350073 Msa0698900:intron 25.0%
!! AATTTGAAGCATAATGAAGA+GGG + chr4_4:69350626-69350645 None:intergenic 25.0%
!! AAATTTGAAGCATAATGAAG+AGG + chr4_4:69350627-69350646 None:intergenic 25.0%
TAATCAAACTCAATGAACCA+CGG - chr4_4:69346363-69346382 Msa0698900:three_prime_UTR 30.0%
CCAACACGTTCAAATTAAAA+TGG + chr4_4:69346498-69346517 None:intergenic 30.0%
!!! CCATTTTAATTTGAACGTGT+TGG - chr4_4:69346495-69346514 Msa0698900:three_prime_UTR 30.0%
TTAACAAAACCACATGAGTA+TGG - chr4_4:69346779-69346798 Msa0698900:CDS 30.0%
! ATAATTTGGGGTAAAACATG+CGG - chr4_4:69347160-69347179 Msa0698900:intron 30.0%
TAGTATAAAGACACGAATCT+AGG - chr4_4:69347215-69347234 Msa0698900:intron 30.0%
! AAGTGGATTTATGAAGGATT+GGG + chr4_4:69347300-69347319 None:intergenic 30.0%
AAATGTGAGAGAAGAATGTA+TGG + chr4_4:69347388-69347407 None:intergenic 30.0%
! CTTCATAATTTGGTTTCAGA+TGG - chr4_4:69347705-69347724 Msa0698900:intron 30.0%
CTTTATCCACAAACAGTAAT+AGG - chr4_4:69347758-69347777 Msa0698900:intron 30.0%
TAATAGGACTACTCTTAGTA+AGG - chr4_4:69347774-69347793 Msa0698900:intron 30.0%
ACTCTTAGTAAGGATTTGAA+TGG - chr4_4:69347784-69347803 Msa0698900:CDS 30.0%
! GAAGATATCTCTTTTCATCA+TGG - chr4_4:69347806-69347825 Msa0698900:CDS 30.0%
!!! ATTTTCCATAAAAGCATCCT+TGG - chr4_4:69347864-69347883 Msa0698900:CDS 30.0%
! AAATTGTTGCTTGGAAATGT+CGG - chr4_4:69347922-69347941 Msa0698900:CDS 30.0%
GTTTCTTGAGTATTTGGATA+AGG - chr4_4:69348029-69348048 Msa0698900:CDS 30.0%
TCATAATGCTCAAGAAGATT+CGG - chr4_4:69348215-69348234 Msa0698900:CDS 30.0%
! ATCTAAAGCCAAGTTTCAAA+TGG - chr4_4:69348371-69348390 Msa0698900:intron 30.0%
GAACCTGATATAGAGAAAAA+CGG + chr4_4:69348600-69348619 None:intergenic 30.0%
!! ATTGATCAGAATGTTTTTGC+AGG - chr4_4:69349066-69349085 Msa0698900:CDS 30.0%
TATTGTTAGCATGAACCTTT+AGG + chr4_4:69349132-69349151 None:intergenic 30.0%
ATAGAATCGTCAATCTCTTT+AGG + chr4_4:69349286-69349305 None:intergenic 30.0%
AGATTGACGATTCTATTGAT+AGG - chr4_4:69349290-69349309 Msa0698900:CDS 30.0%
TCTAAAAATTCCCACAAAGT+TGG - chr4_4:69349519-69349538 Msa0698900:intron 30.0%
ATGTTACAAACCAACTTTGT+GGG + chr4_4:69349532-69349551 None:intergenic 30.0%
! GCAGCAGAAGAAATTATTTT+TGG - chr4_4:69349726-69349745 Msa0698900:intron 30.0%
ACATCAGAAGAAGATAAGAA+AGG + chr4_4:69350177-69350196 None:intergenic 30.0%
! ACATTTGGAATGTCTGATAT+TGG - chr4_4:69350235-69350254 Msa0698900:intron 30.0%
! AAATTGCATTGACACAGATA+AGG - chr4_4:69350392-69350411 Msa0698900:intron 30.0%
CTGAAATTCCAGTTGAAAAT+CGG - chr4_4:69350509-69350528 Msa0698900:intron 30.0%
TGAAATTCCAGTTGAAAATC+GGG - chr4_4:69350510-69350529 Msa0698900:intron 30.0%
AGATGTATTGAAACAAACTC+TGG + chr4_4:69350746-69350765 None:intergenic 30.0%
TATTGACCAGTTACGATTAA+TGG + chr4_4:69350815-69350834 None:intergenic 30.0%
ATTAATCGTAACTGGTCAAT+AGG - chr4_4:69350814-69350833 Msa0698900:intron 30.0%
GTCTAATCTAATTCTTGGAG+TGG - chr4_4:69346331-69346350 Msa0698900:three_prime_UTR 35.0%
TGGATATTTCTTGAGCACTA+AGG - chr4_4:69346515-69346534 Msa0698900:three_prime_UTR 35.0%
! ATACTTCATAGGCTTTTTGC+TGG + chr4_4:69346681-69346700 None:intergenic 35.0%
! TAATTTGGGGTAAAACATGC+GGG - chr4_4:69347161-69347180 Msa0698900:intron 35.0%
! ACGTTTGATTCGTTTCACTT+CGG + chr4_4:69347242-69347261 None:intergenic 35.0%
! CAAGTGGATTTATGAAGGAT+TGG + chr4_4:69347301-69347320 None:intergenic 35.0%
! AGCAACAAGTGGATTTATGA+AGG + chr4_4:69347306-69347325 None:intergenic 35.0%
! AAGTGATGATGAAGAAGAGT+TGG + chr4_4:69347333-69347352 None:intergenic 35.0%
AGTAGTCCTATTACTGTTTG+TGG + chr4_4:69347767-69347786 None:intergenic 35.0%
! TTGTTCCAAGGATGCTTTTA+TGG + chr4_4:69347872-69347891 None:intergenic 35.0%
TTTCCATTTCCCAATAATGC+CGG + chr4_4:69347958-69347977 None:intergenic 35.0%
TTCGAGGTTTCTTGAGTATT+TGG - chr4_4:69348023-69348042 Msa0698900:CDS 35.0%
! TGAATTTCTGAAGAAGCTCT+TGG + chr4_4:69348170-69348189 None:intergenic 35.0%
AAGAGCTTCTTCAGAAATTC+AGG - chr4_4:69348169-69348188 Msa0698900:CDS 35.0%
AGAGCTTCTTCAGAAATTCA+GGG - chr4_4:69348170-69348189 Msa0698900:CDS 35.0%
CATAATGCTCAAGAAGATTC+GGG - chr4_4:69348216-69348235 Msa0698900:CDS 35.0%
TTAGATTGACCGAATTGCAT+AGG + chr4_4:69348357-69348376 None:intergenic 35.0%
! GTTTGGTTCCATTTGAAACT+TGG + chr4_4:69348382-69348401 None:intergenic 35.0%
TTTCAAATGGAACCAAACAC+TGG - chr4_4:69348384-69348403 Msa0698900:intron 35.0%
!!! TGACTTTTGATGATGTTGCT+GGG - chr4_4:69348409-69348428 Msa0698900:intron 35.0%
!! GTTCCGTTTTTCTCTATATC+AGG - chr4_4:69348594-69348613 Msa0698900:CDS 35.0%
!! GAGTTTGTTGAGATGTTTGT+TGG - chr4_4:69348621-69348640 Msa0698900:CDS 35.0%
! GTTGAGATGTTTGTTGGTAT+TGG - chr4_4:69348627-69348646 Msa0698900:CDS 35.0%
TAGCCTTCTTGAACAAATCA+CGG + chr4_4:69348665-69348684 None:intergenic 35.0%
! TTCTGTCAAAAGTTGGTTGA+GGG + chr4_4:69348887-69348906 None:intergenic 35.0%
! TTTCTGTCAAAAGTTGGTTG+AGG + chr4_4:69348888-69348907 None:intergenic 35.0%
! CAACCAACTTTTGACAGAAA+TGG - chr4_4:69348888-69348907 Msa0698900:CDS 35.0%
! CAACTTTTGACAGAAATGGA+CGG - chr4_4:69348892-69348911 Msa0698900:CDS 35.0%
TTCATACCTGTCTATCGAAT+CGG + chr4_4:69348999-69349018 None:intergenic 35.0%
!! CAGAATGTTTTTGCAGGTAT+CGG - chr4_4:69349072-69349091 Msa0698900:CDS 35.0%
!! AGCATGAACCTTTAGGATTT+CGG + chr4_4:69349125-69349144 None:intergenic 35.0%
AATGAAGCTGCTATATTAGC+TGG - chr4_4:69349235-69349254 Msa0698900:CDS 35.0%
TCTATTGATAGGATTGTTGC+TGG - chr4_4:69349301-69349320 Msa0698900:CDS 35.0%
AAGGAACATTAATGACCGAT+GGG - chr4_4:69349329-69349348 Msa0698900:CDS 35.0%
! TAAACTTTTGCTCTTCCCAT+CGG + chr4_4:69349347-69349366 None:intergenic 35.0%
TTAGTGGCATATCATGAAGT+TGG - chr4_4:69349364-69349383 Msa0698900:CDS 35.0%
GCTAATTTCTTACCCACAAA+TGG + chr4_4:69349395-69349414 None:intergenic 35.0%
GTAACATTGCAATGAAAGCA+AGG - chr4_4:69349446-69349465 Msa0698900:intron 35.0%
!! CTTTGTGGGAATTTTTAGAG+TGG + chr4_4:69349518-69349537 None:intergenic 35.0%
GATGTTACAAACCAACTTTG+TGG + chr4_4:69349533-69349552 None:intergenic 35.0%
!!! GTTGTTTTGAGATCAGAGTT+GGG + chr4_4:69349668-69349687 None:intergenic 35.0%
!!! TGTTGTTTTGAGATCAGAGT+TGG + chr4_4:69349669-69349688 None:intergenic 35.0%
CAACTCTTTGCAAGAATTGT+TGG - chr4_4:69349687-69349706 Msa0698900:intron 35.0%
!!! AATTATTTTTGGTGAGCCTG+AGG - chr4_4:69349737-69349756 Msa0698900:intron 35.0%
! AATTACCTGTCTTGCTATAC+CGG + chr4_4:69349799-69349818 None:intergenic 35.0%
AAATCTGCATCATCGTTGTA+AGG + chr4_4:69350115-69350134 None:intergenic 35.0%
AACGATGATGCAGATTTAGA+AGG - chr4_4:69350118-69350137 Msa0698900:intron 35.0%
GTTAATGATACTCTTGCAGA+TGG - chr4_4:69350207-69350226 Msa0698900:intron 35.0%
CGATGTTATCATGAGAATGA+TGG - chr4_4:69350294-69350313 Msa0698900:intron 35.0%
TTATCATGAGAATGATGGCA+AGG - chr4_4:69350299-69350318 Msa0698900:intron 35.0%
CAATCTTATCAATTGCCTCA+CGG + chr4_4:69350423-69350442 None:intergenic 35.0%
TGAGGCAATTGATAAGATTG+TGG - chr4_4:69350423-69350442 Msa0698900:intron 35.0%
AACAAGCCATTAATCGTAAC+TGG - chr4_4:69350806-69350825 Msa0698900:intron 35.0%
ATCTAATTCTTGGAGTGGAG+CGG - chr4_4:69346336-69346355 Msa0698900:three_prime_UTR 40.0%
! AGCACTAAGGTACCTTTCTT+CGG - chr4_4:69346528-69346547 Msa0698900:three_prime_UTR 40.0%
ATCACGTTACCATACTCATG+TGG + chr4_4:69346791-69346810 None:intergenic 40.0%
ATCACGTCAGTTAATTCTCG+TGG + chr4_4:69347069-69347088 None:intergenic 40.0%
! AATTTGGGGTAAAACATGCG+GGG - chr4_4:69347162-69347181 Msa0698900:intron 40.0%
ACGTTAATAGAAAGCCACGT+AGG - chr4_4:69347258-69347277 Msa0698900:intron 40.0%
GATTTATGAAGGATTGGGTG+TGG + chr4_4:69347295-69347314 None:intergenic 40.0%
GTGAGAGAAGAATGTATGGA+AGG + chr4_4:69347384-69347403 None:intergenic 40.0%
ATCCTTGGAACAAAATCAGC+AGG - chr4_4:69347879-69347898 Msa0698900:CDS 40.0%
!!! TTCCTGCTGATTTTGTTCCA+AGG + chr4_4:69347884-69347903 None:intergenic 40.0%
TTGGAACAAAATCAGCAGGA+AGG - chr4_4:69347883-69347902 Msa0698900:CDS 40.0%
AAAATCAGCAGGAAGGAAGA+AGG - chr4_4:69347890-69347909 Msa0698900:CDS 40.0%
AAATCAGCAGGAAGGAAGAA+GGG - chr4_4:69347891-69347910 Msa0698900:CDS 40.0%
!! GGGATTCTGAAATTGTTGCT+TGG - chr4_4:69347913-69347932 Msa0698900:CDS 40.0%
CTTATGCTGCTGATGAACAA+GGG - chr4_4:69347980-69347999 Msa0698900:CDS 40.0%
AAACCTCGAATACGACATTC+TGG + chr4_4:69348013-69348032 None:intergenic 40.0%
TGGAACCATAGCTATTGTTG+AGG - chr4_4:69348083-69348102 Msa0698900:intron 40.0%
TGTCTCCTGAATTGGGAAAT+AGG - chr4_4:69348109-69348128 Msa0698900:intron 40.0%
TGCAACCTATTTCCCAATTC+AGG + chr4_4:69348117-69348136 None:intergenic 40.0%
CCTGGATTTCCTATGCAATT+CGG - chr4_4:69348345-69348364 Msa0698900:intron 40.0%
TCAAAAGTCACTCCAGTGTT+TGG + chr4_4:69348399-69348418 None:intergenic 40.0%
!!! GTGACTTTTGATGATGTTGC+TGG - chr4_4:69348408-69348427 Msa0698900:intron 40.0%
!!! GACTTTTGATGATGTTGCTG+GGG - chr4_4:69348410-69348429 Msa0698900:intron 40.0%
! TGAAGCCAAGCAGGATTTTA+TGG - chr4_4:69348437-69348456 Msa0698900:intron 40.0%
AATTTCTCAAGAAGCCTGAG+AGG - chr4_4:69348469-69348488 Msa0698900:intron 40.0%
! CCAACAAGAAGAACTCCTTT+TGG + chr4_4:69348519-69348538 None:intergenic 40.0%
CCAAAAGGAGTTCTTCTTGT+TGG - chr4_4:69348516-69348535 Msa0698900:CDS 40.0%
!! TGTCCGTGATTTGTTCAAGA+AGG - chr4_4:69348659-69348678 Msa0698900:CDS 40.0%
CGTCCATTTCTGTCAAAAGT+TGG + chr4_4:69348894-69348913 None:intergenic 40.0%
! ACAGAAATGGACGGATTTGA+GGG - chr4_4:69348901-69348920 Msa0698900:CDS 40.0%
! TTGTTGTTGCTGCAACTAAC+AGG - chr4_4:69348938-69348957 Msa0698900:CDS 40.0%
TGTTGTTGCTGCAACTAACA+GGG - chr4_4:69348939-69348958 Msa0698900:CDS 40.0%
TAACGCAGAGTCAAGAATGT+CGG + chr4_4:69348965-69348984 None:intergenic 40.0%
! GGTTGATGTTCCAGATGTAA+GGG - chr4_4:69349093-69349112 Msa0698900:CDS 40.0%
GTTGATGTTCCAGATGTAAG+GGG - chr4_4:69349094-69349113 Msa0698900:CDS 40.0%
AAGCTGCTATATTAGCTGGT+CGG - chr4_4:69349239-69349258 Msa0698900:CDS 40.0%
TGATAGGATTGTTGCTGGAA+TGG - chr4_4:69349306-69349325 Msa0698900:CDS 40.0%
GAAGGAACATTAATGACCGA+TGG - chr4_4:69349328-69349347 Msa0698900:CDS 40.0%
TGGGAAGAGCAAAAGTTTAG+TGG - chr4_4:69349348-69349367 Msa0698900:CDS 40.0%
! AAGTTGGTCATGCCATTTGT+GGG - chr4_4:69349380-69349399 Msa0698900:CDS 40.0%
! GCAATGAAAGCAAGGTTTTG+TGG - chr4_4:69349454-69349473 Msa0698900:intron 40.0%
CTCTTTGCAAGAATTGTTGG+AGG - chr4_4:69349690-69349709 Msa0698900:intron 40.0%
GCAAGAATTGTTGGAGGATT+AGG - chr4_4:69349696-69349715 Msa0698900:intron 40.0%
AGAATTGTTGGAGGATTAGG+TGG - chr4_4:69349699-69349718 Msa0698900:intron 40.0%
AAAATGTTAACTACTGCCCC+CGG - chr4_4:69350013-69350032 Msa0698900:intron 40.0%
GCATCATCGTTGTAAGGAAT+AGG + chr4_4:69350109-69350128 None:intergenic 40.0%
TTGCAGATGGTAGTCACATT+TGG - chr4_4:69350220-69350239 Msa0698900:intron 40.0%
GAATGTCTGATATTGGTCCT+TGG - chr4_4:69350242-69350261 Msa0698900:intron 40.0%
TATTGGTCCTTGGTCACTTA+TGG - chr4_4:69350252-69350271 Msa0698900:intron 40.0%
ATCTGACAATCTCTTGACAG+CGG + chr4_4:69350362-69350381 None:intergenic 40.0%
TAAGATTGTGGAAGTCCTTC+TGG - chr4_4:69350435-69350454 Msa0698900:intron 40.0%
ACATACAGGCCATTCAAACA+GGG + chr4_4:69350561-69350580 None:intergenic 40.0%
TACATACAGGCCATTCAAAC+AGG + chr4_4:69350562-69350581 None:intergenic 40.0%
GCATAATGAAGAGGGTAACT+TGG + chr4_4:69350618-69350637 None:intergenic 40.0%
TCGTAACTGGTCAATAGGAA+TGG - chr4_4:69350819-69350838 Msa0698900:intron 40.0%
CGTAACTGGTCAATAGGAAT+GGG - chr4_4:69350820-69350839 Msa0698900:intron 40.0%
TGGTCAATAGGAATGGGAAT+AGG - chr4_4:69350826-69350845 Msa0698900:intron 40.0%
GAAGTGTACACACCGAAGAA+AGG + chr4_4:69346543-69346562 None:intergenic 45.0%
GAGTTGGAGTTAGCAACAAG+TGG + chr4_4:69347317-69347336 None:intergenic 45.0%
GCATCATCAGCATGTCTTGT+TGG - chr4_4:69347730-69347749 Msa0698900:intron 45.0%
AATCAGCAGGAAGGAAGAAG+GGG - chr4_4:69347892-69347911 Msa0698900:CDS 45.0%
TTGCTTGGAAATGTCGGTGT+TGG - chr4_4:69347928-69347947 Msa0698900:CDS 45.0%
!! AAATGTCGGTGTTGGTTTGC+CGG - chr4_4:69347936-69347955 Msa0698900:CDS 45.0%
!! TGTTGGTTTGCCGGCATTAT+TGG - chr4_4:69347945-69347964 Msa0698900:CDS 45.0%
!! GTTGGTTTGCCGGCATTATT+GGG - chr4_4:69347946-69347965 Msa0698900:CDS 45.0%
TTGCCGGCATTATTGGGAAA+TGG - chr4_4:69347952-69347971 Msa0698900:CDS 45.0%
GCTTATGCTGCTGATGAACA+AGG - chr4_4:69347979-69347998 Msa0698900:CDS 45.0%
CACAGCCTCAACAATAGCTA+TGG + chr4_4:69348091-69348110 None:intergenic 45.0%
ATACACCAATGACAGCAGCA+GGG + chr4_4:69348278-69348297 None:intergenic 45.0%
AATACACCAATGACAGCAGC+AGG + chr4_4:69348279-69348298 None:intergenic 45.0%
GTGTATTGTTCCTTCTCTCG+AGG - chr4_4:69348292-69348311 Msa0698900:CDS 45.0%
TATTGTTCCTTCTCTCGAGG+CGG - chr4_4:69348295-69348314 Msa0698900:CDS 45.0%
CCGAATTGCATAGGAAATCC+AGG + chr4_4:69348348-69348367 None:intergenic 45.0%
!!! TTTTGATGATGTTGCTGGGG+TGG - chr4_4:69348413-69348432 Msa0698900:intron 45.0%
! AGCCAAGCAGGATTTTATGG+AGG - chr4_4:69348440-69348459 Msa0698900:intron 45.0%
CACCTCCATAAAATCCTGCT+TGG + chr4_4:69348445-69348464 None:intergenic 45.0%
! CAAGCAGGATTTTATGGAGG+TGG - chr4_4:69348443-69348462 Msa0698900:intron 45.0%
AACAAAGTCTTTCCGGTTCC+TGG + chr4_4:69348546-69348565 None:intergenic 45.0%
AGGAACCGGAAAGACTTTGT+TGG - chr4_4:69348545-69348564 Msa0698900:CDS 45.0%
CTTGGCCAACAAAGTCTTTC+CGG + chr4_4:69348553-69348572 None:intergenic 45.0%
ACGCTGTTGGAAGACAAAGA+GGG - chr4_4:69348824-69348843 Msa0698900:CDS 45.0%
AGACAAAGAGGGACAGGAAT+TGG - chr4_4:69348835-69348854 Msa0698900:CDS 45.0%
! GACAGAAATGGACGGATTTG+AGG - chr4_4:69348900-69348919 Msa0698900:CDS 45.0%
! GACGGATTTGAGGGTAATAC+CGG - chr4_4:69348910-69348929 Msa0698900:CDS 45.0%
TGCAGCAACAACAATGACAC+CGG + chr4_4:69348932-69348951 None:intergenic 45.0%
! CGGTTGATGTTCCAGATGTA+AGG - chr4_4:69349092-69349111 Msa0698900:CDS 45.0%
ATGTTCCAGATGTAAGGGGA+AGG - chr4_4:69349098-69349117 Msa0698900:CDS 45.0%
GTGATTGCAATGAGAACACC+TGG - chr4_4:69349181-69349200 Msa0698900:CDS 45.0%
ATGAGAACACCTGGTTTCAG+CGG - chr4_4:69349190-69349209 Msa0698900:CDS 45.0%
AGGATTGTTGCTGGAATGGA+AGG - chr4_4:69349310-69349329 Msa0698900:CDS 45.0%
! GAAGTTGGTCATGCCATTTG+TGG - chr4_4:69349379-69349398 Msa0698900:CDS 45.0%
TTTGACTCCTGGTCATGATG+CGG - chr4_4:69349575-69349594 Msa0698900:intron 45.0%
! TTTTGTACCGCATCATGACC+AGG + chr4_4:69349585-69349604 None:intergenic 45.0%
TGGTCATGATGCGGTACAAA+AGG - chr4_4:69349584-69349603 Msa0698900:intron 45.0%
AAGGTGACATTAGTTCCTCG+AGG - chr4_4:69349603-69349622 Msa0698900:intron 45.0%
TGAGATCAGAGTTGGGTCAT+CGG + chr4_4:69349661-69349680 None:intergenic 45.0%
TTGTTGGAGGATTAGGTGGT+AGG - chr4_4:69349703-69349722 Msa0698900:intron 45.0%
TGTTGGAGGATTAGGTGGTA+GGG - chr4_4:69349704-69349723 Msa0698900:intron 45.0%
! GGTGATTTGCAGCAAATCAC+CGG - chr4_4:69349777-69349796 Msa0698900:CDS 45.0%
AATCACCGGTATAGCAAGAC+AGG - chr4_4:69349791-69349810 Msa0698900:CDS 45.0%
AAATGTTAACTACTGCCCCC+GGG - chr4_4:69350014-69350033 Msa0698900:intron 45.0%
ACAGATAAGGAACAACCGTG+AGG - chr4_4:69350405-69350424 Msa0698900:intron 45.0%
TCAATGTCTCCTTCTCCAGA+AGG + chr4_4:69350453-69350472 None:intergenic 45.0%
TAAACTCTGACAGTAGAGCG+CGG + chr4_4:69350489-69350508 None:intergenic 45.0%
ATTCAAACAGGGACTGCTAC+TGG + chr4_4:69350550-69350569 None:intergenic 45.0%
AGTAGCAGTCCCTGTTTGAA+TGG - chr4_4:69350549-69350568 Msa0698900:intron 45.0%
!! GACGCGTAGCTTTATTTCCG+TGG + chr4_4:69346383-69346402 None:intergenic 50.0%
ATCAGCAGGAAGGAAGAAGG+GGG - chr4_4:69347893-69347912 Msa0698900:CDS 50.0%
CCTCGAATACGACATTCTGG+AGG + chr4_4:69348010-69348029 None:intergenic 50.0%
CCTCCAGAATGTCGTATTCG+AGG - chr4_4:69348007-69348026 Msa0698900:CDS 50.0%
TGAGGCTGTGTCTCCTGAAT+TGG - chr4_4:69348101-69348120 Msa0698900:intron 50.0%
GAGGCTGTGTCTCCTGAATT+GGG - chr4_4:69348102-69348121 Msa0698900:intron 50.0%
! CGTGTTCGAGTTCAACTTCC+TGG - chr4_4:69348138-69348157 Msa0698900:intron 50.0%
AGAAGCTCTTGGCTAAGTCC+AGG + chr4_4:69348159-69348178 None:intergenic 50.0%
ATAGGAAATCCAGGTCCACC+GGG + chr4_4:69348339-69348358 None:intergenic 50.0%
CATAGGAAATCCAGGTCCAC+CGG + chr4_4:69348340-69348359 None:intergenic 50.0%
CCAACAGAAGTGAACCTCTC+AGG + chr4_4:69348486-69348505 None:intergenic 50.0%
CCTGAGAGGTTCACTTCTGT+TGG - chr4_4:69348483-69348502 Msa0698900:intron 50.0%
! GTTGGTGCTCGCATTCCAAA+AGG - chr4_4:69348501-69348520 Msa0698900:intron 50.0%
GTTCTTCTTGTTGGTCCTCC+AGG - chr4_4:69348525-69348544 Msa0698900:CDS 50.0%
AAAGTCTTTCCGGTTCCTGG+AGG + chr4_4:69348543-69348562 None:intergenic 50.0%
CGGAAAGACTTTGTTGGCCA+AGG - chr4_4:69348551-69348570 Msa0698900:CDS 50.0%
TTGTTGGCCAAGGCTATTGC+TGG - chr4_4:69348561-69348580 Msa0698900:CDS 50.0%
CAAGGCTATTGCTGGTGAAG+CGG - chr4_4:69348569-69348588 Msa0698900:CDS 50.0%
AAGGCTATTGCTGGTGAAGC+GGG - chr4_4:69348570-69348589 Msa0698900:CDS 50.0%
GACGCTGTTGGAAGACAAAG+AGG - chr4_4:69348823-69348842 Msa0698900:CDS 50.0%
GTTGGAAGACAAAGAGGGAC+AGG - chr4_4:69348829-69348848 Msa0698900:CDS 50.0%
CAAAGAGGGACAGGAATTGG+TGG - chr4_4:69348838-69348857 Msa0698900:CDS 50.0%
GACTCTGCGTTATTGAGACC+AGG - chr4_4:69348973-69348992 Msa0698900:CDS 50.0%
GGGAAGGACCGAAATCCTAA+AGG - chr4_4:69349114-69349133 Msa0698900:intron 50.0%
GGTTGCAGAACTTTGACTCC+TGG - chr4_4:69349564-69349583 Msa0698900:intron 50.0%
TAGTTCCTCGAGGTCAAGCT+CGG - chr4_4:69349613-69349632 Msa0698900:intron 50.0%
ATCAGAGTTGGGTCATCGGA+AGG + chr4_4:69349657-69349676 None:intergenic 50.0%
AATGTTAACTACTGCCCCCG+GGG - chr4_4:69350015-69350034 Msa0698900:intron 50.0%
GACGAGTCCATAAGTGACCA+AGG + chr4_4:69350262-69350281 None:intergenic 50.0%
ATGGACTCGTCAGCACAAAG+TGG - chr4_4:69350271-69350290 Msa0698900:intron 50.0%
! TGTGGAAGTCCTTCTGGAGA+AGG - chr4_4:69350441-69350460 Msa0698900:intron 50.0%
CTGGAGAAGGAGACATTGAG+TGG - chr4_4:69350454-69350473 Msa0698900:intron 50.0%
! GGAGGAACCCGATTTTCAAC+TGG + chr4_4:69350520-69350539 None:intergenic 50.0%
ACTGCTACTGGAGTTGAAGG+AGG + chr4_4:69350538-69350557 None:intergenic 50.0%
ATGGGAATAGGCGAGATGAC+TGG - chr4_4:69350838-69350857 Msa0698900:intron 50.0%
ACTTGAGCCTGAAGTAGGCT+AGG + chr4_4:69350864-69350883 None:intergenic 50.0%
TGGCTAGAGGAAGACCTACG+TGG + chr4_4:69347275-69347294 None:intergenic 55.0%
GAAGGATTGGGTGTGGCTAG+AGG + chr4_4:69347288-69347307 None:intergenic 55.0%
TTCCTCTGCACTGCACTCAG+AGG - chr4_4:69347352-69347371 Msa0698900:intron 55.0%
AACCTCTGAGTGCAGTGCAG+AGG + chr4_4:69347357-69347376 None:intergenic 55.0%
GCTTTCCCTGCTGCTGTCAT+TGG - chr4_4:69348270-69348289 Msa0698900:CDS 55.0%
CTTGTTGGTCCTCCAGGAAC+CGG - chr4_4:69348531-69348550 Msa0698900:CDS 55.0%
CGCTTCACCAGCAATAGCCT+TGG + chr4_4:69348571-69348590 None:intergenic 55.0%
AGAGGGACAGGAATTGGTGG+AGG - chr4_4:69348841-69348860 Msa0698900:CDS 55.0%
GAGGGACAGGAATTGGTGGA+GGG - chr4_4:69348842-69348861 Msa0698900:CDS 55.0%
!! ACCAGGCCGATTCGATAGAC+AGG - chr4_4:69348990-69349009 Msa0698900:CDS 55.0%
ACCTGTCTATCGAATCGGCC+TGG + chr4_4:69348994-69349013 None:intergenic 55.0%
TCGGTCCTTCCCCTTACATC+TGG + chr4_4:69349106-69349125 None:intergenic 55.0%
AGATCAGCTCCGCTGAAACC+AGG + chr4_4:69349202-69349221 None:intergenic 55.0%
GCTATATTAGCTGGTCGGCG+AGG - chr4_4:69349244-69349263 Msa0698900:CDS 55.0%
TATTAGCTGGTCGGCGAGGA+AGG - chr4_4:69349248-69349267 Msa0698900:CDS 55.0%
AGTTCCTCGAGGTCAAGCTC+GGG - chr4_4:69349614-69349633 Msa0698900:intron 55.0%
GTCAAGCTCGGGGTCTTACA+TGG - chr4_4:69349625-69349644 Msa0698900:intron 55.0%
GGTGAGCCTGAGGTTACAAC+TGG - chr4_4:69349747-69349766 Msa0698900:intron 55.0%
CCTGCACCAGTTGTAACCTC+AGG + chr4_4:69349756-69349775 None:intergenic 55.0%
CCTGAGGTTACAACTGGTGC+AGG - chr4_4:69349753-69349772 Msa0698900:intron 55.0%
GAGGTTACAACTGGTGCAGG+TGG - chr4_4:69349756-69349775 Msa0698900:intron 55.0%
TTTCCTTAACCAGTGCCCCG+GGG + chr4_4:69350033-69350052 None:intergenic 55.0%
GTTTCCTTAACCAGTGCCCC+GGG + chr4_4:69350034-69350053 None:intergenic 55.0%
GGTTTCCTTAACCAGTGCCC+CGG + chr4_4:69350035-69350054 None:intergenic 55.0%
GGGACTGCTACTGGAGTTGA+AGG + chr4_4:69350541-69350560 None:intergenic 55.0%
!! TGACTGGCCTAGCCTACTTC+AGG - chr4_4:69350854-69350873 Msa0698900:intron 55.0%
TTCCTTCTCTCGAGGCGGTC+CGG - chr4_4:69348300-69348319 Msa0698900:CDS 60.0%
TGGGGTGGATGAAGCCAAGC+AGG - chr4_4:69348428-69348447 Msa0698900:intron 60.0%
GTTCCTCGAGGTCAAGCTCG+GGG - chr4_4:69349615-69349634 Msa0698900:intron 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + chr4_4:69350032-69350051 None:intergenic 60.0%
TCGAGGCGGTCCGGTGGAAT+GGG - chr4_4:69348309-69348328 Msa0698900:CDS 65.0%
TCCGGTGGAATGGGAGGTCC+CGG - chr4_4:69348318-69348337 Msa0698900:CDS 65.0%
ACCGGGACCTCCCATTCCAC+CGG + chr4_4:69348322-69348341 None:intergenic 65.0%
CTGGTCGGCGAGGAAGGACA+GGG - chr4_4:69349254-69349273 Msa0698900:CDS 65.0%
AGACCCCGAGCTTGACCTCG+AGG + chr4_4:69349621-69349640 None:intergenic 65.0%
CACCGGACCGCCTCGAGAGA+AGG + chr4_4:69348305-69348324 None:intergenic 70.0%
CTTCTCTCGAGGCGGTCCGG+TGG - chr4_4:69348303-69348322 Msa0698900:CDS 70.0%
CTCGAGGCGGTCCGGTGGAA+TGG - chr4_4:69348308-69348327 Msa0698900:CDS 70.0%
AGGCGGTCCGGTGGAATGGG+AGG - chr4_4:69348312-69348331 Msa0698900:CDS 70.0%
GGTGGAATGGGAGGTCCCGG+TGG - chr4_4:69348321-69348340 Msa0698900:CDS 70.0%
ATGGGAGGTCCCGGTGGACC+TGG - chr4_4:69348327-69348346 Msa0698900:intron 70.0%
GCTGGTCGGCGAGGAAGGAC+AGG - chr4_4:69349253-69349272 Msa0698900:CDS 70.0%
AACTACTGCCCCCGGGGCAC+TGG - chr4_4:69350021-69350040 Msa0698900:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr4_4:69350027-69350046 Msa0698900:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 69346292 69350887 69346292 ID=Msa0698900;Name=Msa0698900
chr4_4 mRNA 69346292 69350887 69346292 ID=Msa0698900-mRNA-1;Parent=Msa0698900;Name=Msa0698900-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.3|0.27|0.81|1|0.90|11|320|687
chr4_4 exon 69346292 69346953 69346292 ID=Msa0698900-mRNA-1:exon:20774;Parent=Msa0698900-mRNA-1
chr4_4 exon 69347367 69347607 69347367 ID=Msa0698900-mRNA-1:exon:20773;Parent=Msa0698900-mRNA-1
chr4_4 exon 69347778 69348091 69347778 ID=Msa0698900-mRNA-1:exon:20772;Parent=Msa0698900-mRNA-1
chr4_4 exon 69348168 69348342 69348168 ID=Msa0698900-mRNA-1:exon:20771;Parent=Msa0698900-mRNA-1
chr4_4 exon 69348509 69348699 69348509 ID=Msa0698900-mRNA-1:exon:20770;Parent=Msa0698900-mRNA-1
chr4_4 exon 69348718 69348865 69348718 ID=Msa0698900-mRNA-1:exon:20769;Parent=Msa0698900-mRNA-1
chr4_4 exon 69348881 69349123 69348881 ID=Msa0698900-mRNA-1:exon:20768;Parent=Msa0698900-mRNA-1
chr4_4 exon 69349151 69349399 69349151 ID=Msa0698900-mRNA-1:exon:20767;Parent=Msa0698900-mRNA-1
chr4_4 exon 69349762 69349907 69349762 ID=Msa0698900-mRNA-1:exon:20766;Parent=Msa0698900-mRNA-1
chr4_4 exon 69350408 69350415 69350408 ID=Msa0698900-mRNA-1:exon:20765;Parent=Msa0698900-mRNA-1
chr4_4 exon 69350881 69350887 69350881 ID=Msa0698900-mRNA-1:exon:20764;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69350881 69350887 69350881 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69350408 69350415 69350408 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69349762 69349907 69349762 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69349151 69349399 69349151 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69348881 69349123 69348881 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69348718 69348865 69348718 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69348509 69348699 69348509 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69348168 69348342 69348168 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69347778 69348091 69347778 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69347367 69347607 69347367 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 CDS 69346612 69346953 69346612 ID=Msa0698900-mRNA-1:cds;Parent=Msa0698900-mRNA-1
chr4_4 three_prime_UTR 69346292 69346611 69346292 ID=Msa0698900-mRNA-1:three_prime_utr;Parent=Msa0698900-mRNA-1
Gene Sequence

>Msa0698900

ATGCAATTAAAAATGCCACGTAGGTCTTCCTCTAGCCACACCCAATCCTTCATAAATCCACTTGTTGCTAACTCCAACTCTTCTTCATCATCACTTTCCTCTGCACTGCACTCAGAGGTTCAAACCTTCCATACATTCTTCTCTCACATTTTACTTTTAAGGACTACTCTTAGTAAGGATTTGAATGGAAGATATCTCTTTTCATCATGGAGATTTTCATCATTCAATAATAAGGCATCAAAATCATTTTCCATAAAAGCATCCTTGGAACAAAATCAGCAGGAAGGAAGAAGGGGGATTCTGAAATTGTTGCTTGGAAATGTCGGTGTTGGTTTGCCGGCATTATTGGGAAATGGAAAAGCTTATGCTGCTGATGAACAAGGGTCGTCCTCCAGAATGTCGTATTCGAGAGTTACCAAAGTTGATCTATATGAGAATGGAACCATAGCTATTGTTGAGGCTGTGTCTCCTGAATTGGGAAATAGGTTGCAGCGTGTTCGAGTTCAACTTCCTGGACTTAGCCAAGAGCTTCTTCAGAAATTCAGGGAAAAGAACATTGACTTTGCAGCTCATAATGCTCAAGAAGATTCGGGTTCTCTTTTGTTTAATCTCATTGGGAATCTTGCTTTCCCTGCTGCTGTCATTGGTGTATTGCGGTCCGGTGGAATGGGAGGTCCCGGTGGACCTGGATTTCCTATGCAATTCGGTCAATCTAAAGCCAAGTTTCAAATGGAACCAAACACTGGAGTGACTTTTGATGATGTTGCTGGGGTGGATGAAGCCAAGCAGGATTTTATGGAGAAGCCTGAGAGGTTCACTTCTGTTGGTGCTCGCATTCCAAAAGGAGTTCTTCTTGTTGGTCCTCCAGGAACCGGAAAGACTTTGTTGGCCAAGGCTATTGCTGGTGAAGCGGGTGTTCCGTTTTTCTCTATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTATTGGTGCTTCTCGTGTCCGTGATTTACAAAGAGGGACAGGAATTGGTGGAGGGAATGACGAAAGAGAACAGACCCTCAACCAACTTTTGACAGAAATGGACGGATTTGAGGGTAATACCGGTGTCATTGTTGTTGCTGCAACTAACAGGGCCGACATTCTTGACTCTGCGTTATTGAGACCAGGCCGATTCGATAGACAGGTATCGGTTGATGTTCCAGATGTAAGGGGAAGGACCGAAATCCTAAAGGTTCATGCTAACAATAAAAAATTTGATAATGATGTTTCTCTTGAAGTGATTGCAATGAGAACACCTGGTTTCAGCGGAGCTGATCTTGCAAATCTATTGAATGAAGCTGCTATATTAGCTGGTCGGCGAGGAAGGACAGGGATTTCACCTAAAGAGATTGACGATTCTATTGATAGGATTGTTGCTGGAATGGAAGGAACATTAATGACCGATGGGAAGAGCAAAAGTTTAGTGGCATATCATGAAGTTGGTCATGCCATTTGTGGAACTTTGACTCCTGGTCATGATGCGGTACAAAAGGTGACATTAGTTCCTCGAGGTCAAGCTCGGGGTCTTACATGGTTCATTCCTTCCGATGACCCAACTCTGATCTCAAAACAACAACTCTTTGCAAGAATTGTTGGAGGATTAGGTGGTAGGGCAGCAGAAGAAATTATTTTTGGTGAGCCTGAGGTTACAACTGGTGCAGGTGGTGATTTGCAGCAAATCACCGGTATAGCAAGACAGATGGTAGTCACATTTGGAATGTCTGATATTGGTCCTTGGTCACTTATGGACTCGTCAGCACAAAGTGGCGATGTTATCATGAGAATGATGGCAAGGAACTCAATGTCAGAAAAGCTTGCAGAAGACATTGATACCGCTGTCAAGAGATTGTCAGATGAAGCATATGAAATTGCATTGACACAGATAAGGAACAACCGTGAGGCAATTGATAAGATTGTGGAAGTCCTTCTGGAGAAGGAGACATTGAGTGGAGATGAATTCCGCGCTCTACTGTCAGAGTTTACTGAAATTCCAGTTGAAAATCGGGTTCCTCCTTCAACTCCAGTAGCAGTCCCTGTTTGA
Protein sequence

>Msa0698900

MQLKMPRRSSSSHTQSFINPLVANSNSSSSSLSSALHSEVQTFHTFFSHILLLRTTLSKDLNGRYLFSSWRFSSFNNKASKSFSIKASLEQNQQEGRRGILKLLLGNVGVGLPALLGNGKAYAADEQGSSSRMSYSRVTKVDLYENGTIAIVEAVSPELGNRLQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPAAVIGVLRSGGMGGPGGPGFPMQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEKPERFTSVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGIGASRVRDLQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHANNKKFDNDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTGISPKEIDDSIDRIVAGMEGTLMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAGGDLQQITGIARQMVVTFGMSDIGPWSLMDSSAQSGDVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALTQIRNNREAIDKIVEVLLEKETLSGDEFRALLSEFTEIPVENRVPPSTPVAVPV*