Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488850 | XP_003598178.1 | 98.232 | 509 | 9 | 0 | 1 | 509 | 1 | 509 | 0.0 | 1010 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488850 | sp|Q07423|HEX6_RICCO | 78.384 | 495 | 107 | 0 | 6 | 500 | 5 | 499 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488850 | G7IVL0 | 98.232 | 509 | 9 | 0 | 1 | 509 | 1 | 509 | 0.0 | 1010 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0488850 | 0.809284 | 2.041715e-50 | -8.615850e-47 |
| Msa0008850 | Msa0488850 | 0.802998 | 4.299541e-49 | -8.615850e-47 |
| Msa0028280 | Msa0488850 | 0.809037 | 2.306004e-50 | -8.615850e-47 |
| Msa0030030 | Msa0488850 | 0.814595 | 1.421917e-51 | -8.615850e-47 |
| Msa0039200 | Msa0488850 | 0.805885 | 1.075656e-49 | -8.615850e-47 |
| Msa0043960 | Msa0488850 | -0.801957 | 7.045227e-49 | -8.615850e-47 |
| Msa0047470 | Msa0488850 | 0.839293 | 1.728003e-57 | -8.615850e-47 |
| Msa0051100 | Msa0488850 | 0.816069 | 6.687609e-52 | -8.615850e-47 |
| Msa0055280 | Msa0488850 | 0.815567 | 8.654687e-52 | -8.615850e-47 |
| Msa0059590 | Msa0488850 | 0.802931 | 4.438972e-49 | -8.615850e-47 |
| Msa0077330 | Msa0488850 | 0.807407 | 5.131430e-50 | -8.615850e-47 |
| Msa0083160 | Msa0488850 | 0.804343 | 2.260770e-49 | -8.615850e-47 |
| Msa0086820 | Msa0488850 | 0.803180 | 3.942702e-49 | -8.615850e-47 |
| Msa0090620 | Msa0488850 | -0.800201 | 1.610488e-48 | -8.615850e-47 |
| Msa0100250 | Msa0488850 | 0.809501 | 1.834509e-50 | -8.615850e-47 |
| Msa0101060 | Msa0488850 | 0.821613 | 3.679445e-53 | -8.615850e-47 |
| Msa0103060 | Msa0488850 | 0.808995 | 2.354076e-50 | -8.615850e-47 |
| Msa0133670 | Msa0488850 | 0.804629 | 1.971169e-49 | -8.615850e-47 |
| Msa0133880 | Msa0488850 | 0.804770 | 1.841349e-49 | -8.615850e-47 |
| Msa0146840 | Msa0488850 | 0.812366 | 4.395645e-51 | -8.615850e-47 |
| Msa0169960 | Msa0488850 | 0.826895 | 2.110880e-54 | -8.615850e-47 |
| Msa0175720 | Msa0488850 | 0.805011 | 1.639772e-49 | -8.615850e-47 |
| Msa0183800 | Msa0488850 | -0.800111 | 1.679701e-48 | -8.615850e-47 |
| Msa0184120 | Msa0488850 | 0.803782 | 2.957260e-49 | -8.615850e-47 |
| Msa0197730 | Msa0488850 | 0.811218 | 7.813469e-51 | -8.615850e-47 |
| Msa0203180 | Msa0488850 | 0.831776 | 1.378036e-55 | -8.615850e-47 |
| Msa0210880 | Msa0488850 | 0.807659 | 4.537599e-50 | -8.615850e-47 |
| Msa0216560 | Msa0488850 | 0.802865 | 4.579581e-49 | -8.615850e-47 |
| Msa0223100 | Msa0488850 | 0.816215 | 6.204366e-52 | -8.615850e-47 |
| Msa0369780 | Msa0488850 | 0.814624 | 1.401447e-51 | -8.615850e-47 |
| Msa0379500 | Msa0488850 | 0.807994 | 3.850113e-50 | -8.615850e-47 |
| Msa0379540 | Msa0488850 | 0.810161 | 1.322857e-50 | -8.615850e-47 |
| Msa0393520 | Msa0488850 | 0.901810 | 1.837282e-78 | -8.615850e-47 |
| Msa0417150 | Msa0488850 | 0.821277 | 4.398005e-53 | -8.615850e-47 |
| Msa0421800 | Msa0488850 | 0.814894 | 1.221148e-51 | -8.615850e-47 |
| Msa0431830 | Msa0488850 | 0.805558 | 1.259487e-49 | -8.615850e-47 |
| Msa0456480 | Msa0488850 | 0.836310 | 1.008400e-56 | -8.615850e-47 |
| Msa0462140 | Msa0488850 | 0.875933 | 2.084970e-68 | -8.615850e-47 |
| Msa0467800 | Msa0488850 | 0.823314 | 1.481041e-53 | -8.615850e-47 |
| Msa0467880 | Msa0488850 | 0.822548 | 2.233519e-53 | -8.615850e-47 |
| Msa0246300 | Msa0488850 | 0.818703 | 1.706545e-52 | -8.615850e-47 |
| Msa0256430 | Msa0488850 | 0.816014 | 6.879638e-52 | -8.615850e-47 |
| Msa0270460 | Msa0488850 | 0.803758 | 2.991247e-49 | -8.615850e-47 |
| Msa0281940 | Msa0488850 | 0.808244 | 3.406049e-50 | -8.615850e-47 |
| Msa0284870 | Msa0488850 | 0.838769 | 2.361982e-57 | -8.615850e-47 |
| Msa0295840 | Msa0488850 | 0.813263 | 2.797180e-51 | -8.615850e-47 |
| Msa0349050 | Msa0488850 | 0.930627 | 1.243664e-93 | -8.615850e-47 |
| Msa0362430 | Msa0488850 | 0.807625 | 4.614034e-50 | -8.615850e-47 |
| Msa0488850 | Msa0509540 | 0.820123 | 8.100007e-53 | -8.615850e-47 |
| Msa0488850 | Msa0514260 | 0.813135 | 2.983838e-51 | -8.615850e-47 |
| Msa0488850 | Msa0534420 | 0.809255 | 2.070718e-50 | -8.615850e-47 |
| Msa0488850 | Msa0558890 | 0.812891 | 3.374559e-51 | -8.615850e-47 |
| Msa0488850 | Msa0620640 | 0.825964 | 3.517474e-54 | -8.615850e-47 |
| Msa0488850 | Msa0646390 | 0.811763 | 5.950151e-51 | -8.615850e-47 |
| Msa0488850 | Msa0653710 | 0.810202 | 1.296028e-50 | -8.615850e-47 |
| Msa0488850 | Msa0654060 | 0.810650 | 1.037155e-50 | -8.615850e-47 |
| Msa0488850 | Msa0656270 | 0.805083 | 1.584404e-49 | -8.615850e-47 |
| Msa0488850 | Msa0698900 | 0.816028 | 6.830578e-52 | -8.615850e-47 |
| Msa0488850 | Msa0700070 | 0.806260 | 8.968965e-50 | -8.615850e-47 |
| Msa0488850 | Msa0736930 | 0.813233 | 2.839885e-51 | -8.615850e-47 |
| Msa0488850 | Msa0739610 | 0.818365 | 2.035870e-52 | -8.615850e-47 |
| Msa0488850 | Msa0763880 | 0.805839 | 1.099714e-49 | -8.615850e-47 |
| Msa0488850 | Msa0763910 | 0.825375 | 4.851754e-54 | -8.615850e-47 |
| Msa0488850 | Msa0771960 | 0.825362 | 4.885329e-54 | -8.615850e-47 |
| Msa0488850 | Msa0782030 | 0.804861 | 1.762668e-49 | -8.615850e-47 |
| Msa0488850 | Msa0787720 | 0.805506 | 1.291480e-49 | -8.615850e-47 |
| Msa0488850 | Msa0793060 | 0.807722 | 4.398682e-50 | -8.615850e-47 |
| Msa0488850 | Msa0822370 | 0.805582 | 1.245119e-49 | -8.615850e-47 |
| Msa0488850 | Msa0824770 | 0.809053 | 2.287854e-50 | -8.615850e-47 |
| Msa0488850 | Msa0844100 | 0.822129 | 2.794494e-53 | -8.615850e-47 |
| Msa0488850 | Msa0855370 | 0.804165 | 2.462394e-49 | -8.615850e-47 |
| Msa0488850 | Msa0861560 | 0.823960 | 1.045333e-53 | -8.615850e-47 |
| Msa0488850 | Msa0887070 | 0.806475 | 8.078906e-50 | -8.615850e-47 |
| Msa0488850 | Msa0934830 | 0.829225 | 5.800043e-55 | -8.615850e-47 |
| Msa0488850 | Msa0950410 | 0.824462 | 7.967629e-54 | -8.615850e-47 |
| Msa0488850 | Msa0964680 | 0.808832 | 2.551316e-50 | -8.615850e-47 |
| Msa0488850 | Msa0971860 | 0.843903 | 1.052072e-58 | -8.615850e-47 |
| Msa0488850 | Msa0978000 | 0.819458 | 1.149340e-52 | -8.615850e-47 |
| Msa0488850 | Msa0982590 | 0.819919 | 9.018001e-53 | -8.615850e-47 |
| Msa0488850 | Msa1016110 | 0.819785 | 9.677769e-53 | -8.615850e-47 |
| Msa0488850 | Msa1033160 | 0.802479 | 5.502248e-49 | -8.615850e-47 |
| Msa0488850 | Msa1043870 | 0.807799 | 4.236109e-50 | -8.615850e-47 |
| Msa0488850 | Msa1102180 | 0.830261 | 3.243852e-55 | -8.615850e-47 |
| Msa0488850 | Msa1102200 | 0.808589 | 2.875613e-50 | -8.615850e-47 |
| Msa0488850 | Msa1120620 | 0.816076 | 6.663732e-52 | -8.615850e-47 |
| Msa0488850 | Msa1138600 | 0.812603 | 3.900748e-51 | -8.615850e-47 |
| Msa0488850 | Msa1166450 | 0.808064 | 3.720989e-50 | -8.615850e-47 |
| Msa0488850 | Msa1182990 | 0.836548 | 8.772865e-57 | -8.615850e-47 |
| Msa0488850 | Msa1186580 | 0.801262 | 9.783762e-49 | -8.615850e-47 |
| Msa0488850 | Msa1211390 | 0.815807 | 7.651187e-52 | -8.615850e-47 |
| Msa0488850 | Msa1235020 | 0.820487 | 6.682431e-53 | -8.615850e-47 |
| Msa0488850 | Msa1238410 | 0.806122 | 9.587685e-50 | -8.615850e-47 |
| Msa0488850 | Msa1272130 | 0.832906 | 7.235161e-56 | -8.615850e-47 |
| Msa0488850 | Msa1282210 | 0.824179 | 9.288109e-54 | -8.615850e-47 |
| Msa0488850 | Msa1286910 | 0.813247 | 2.819342e-51 | -8.615850e-47 |
| Msa0488850 | Msa1306700 | 0.823415 | 1.402717e-53 | -8.615850e-47 |
| Msa0488850 | Msa1327040 | 0.808145 | 3.575751e-50 | -8.615850e-47 |
| Msa0488850 | Msa1335720 | 0.814832 | 1.260163e-51 | -8.615850e-47 |
| Msa0488850 | Msa1346540 | 0.843110 | 1.714098e-58 | -8.615850e-47 |
| Msa0488850 | Msa1360380 | 0.832217 | 1.071969e-55 | -8.615850e-47 |
| Msa0488850 | Msa1405470 | 0.831922 | 1.268482e-55 | -8.615850e-47 |
| Msa0488850 | Msa1440180 | 0.830103 | 3.546039e-55 | -8.615850e-47 |
| Msa0488850 | Msa1449740 | 0.828526 | 8.561050e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488850 | MtrunA17_Chr3g0078971 | 98.232 | 509 | 9 | 0 | 1 | 509 | 1 | 509 | 0.0 | 1010 |
| Msa0488850 | MtrunA17_Chr3g0078991 | 76.082 | 485 | 115 | 1 | 16 | 499 | 16 | 500 | 0.0 | 763 |
| Msa0488850 | MtrunA17_Chr4g0065311 | 59.213 | 483 | 194 | 3 | 15 | 497 | 13 | 492 | 0.0 | 600 |
| Msa0488850 | MtrunA17_Chr5g0394341 | 56.823 | 491 | 208 | 4 | 15 | 502 | 14 | 503 | 0.0 | 595 |
| Msa0488850 | MtrunA17_Chr5g0437021 | 59.879 | 496 | 193 | 4 | 9 | 501 | 9 | 501 | 0.0 | 592 |
| Msa0488850 | MtrunA17_Chr7g0257631 | 59.834 | 483 | 191 | 3 | 15 | 497 | 53 | 532 | 0.0 | 589 |
| Msa0488850 | MtrunA17_Chr5g0445601 | 58.230 | 486 | 200 | 3 | 15 | 500 | 19 | 501 | 0.0 | 589 |
| Msa0488850 | MtrunA17_Chr1g0164871 | 58.097 | 494 | 201 | 4 | 13 | 503 | 13 | 503 | 0.0 | 579 |
| Msa0488850 | MtrunA17_Chr1g0164851 | 58.571 | 490 | 197 | 4 | 13 | 499 | 13 | 499 | 0.0 | 578 |
| Msa0488850 | MtrunA17_Chr4g0065324 | 55.761 | 486 | 212 | 3 | 15 | 500 | 21 | 503 | 0.0 | 572 |
| Msa0488850 | MtrunA17_Chr4g0048411 | 59.274 | 496 | 196 | 3 | 13 | 503 | 13 | 507 | 0.0 | 571 |
| Msa0488850 | MtrunA17_Chr5g0420841 | 56.701 | 485 | 205 | 3 | 15 | 495 | 13 | 496 | 0.0 | 561 |
| Msa0488850 | MtrunA17_Chr5g0417611 | 57.315 | 499 | 206 | 4 | 8 | 500 | 6 | 503 | 0.0 | 554 |
| Msa0488850 | MtrunA17_Chr1g0205691 | 56.200 | 500 | 212 | 6 | 11 | 505 | 10 | 507 | 0.0 | 552 |
| Msa0488850 | MtrunA17_Chr3g0128081 | 56.619 | 491 | 208 | 3 | 11 | 497 | 10 | 499 | 0.0 | 546 |
| Msa0488850 | MtrunA17_Chr1g0205681 | 52.893 | 484 | 224 | 4 | 15 | 495 | 15 | 497 | 0.0 | 543 |
| Msa0488850 | MtrunA17_Chr3g0115741 | 52.429 | 494 | 226 | 7 | 17 | 505 | 20 | 509 | 0.0 | 540 |
| Msa0488850 | MtrunA17_Chr3g0115751 | 52.096 | 501 | 232 | 6 | 1 | 497 | 6 | 502 | 0.0 | 539 |
| Msa0488850 | MtrunA17_Chr1g0205671 | 52.795 | 483 | 225 | 3 | 15 | 495 | 15 | 496 | 0.0 | 538 |
| Msa0488850 | MtrunA17_Chr3g0115721 | 51.594 | 502 | 235 | 6 | 8 | 505 | 8 | 505 | 0.0 | 538 |
| Msa0488850 | MtrunA17_Chr8g0390261 | 53.704 | 486 | 222 | 3 | 15 | 499 | 18 | 501 | 0.0 | 536 |
| Msa0488850 | MtrunA17_Chr3g0115781 | 52.535 | 493 | 225 | 7 | 18 | 505 | 20 | 508 | 0.0 | 532 |
| Msa0488850 | MtrunA17_Chr4g0048051 | 56.275 | 510 | 214 | 3 | 1 | 502 | 1 | 509 | 0.0 | 532 |
| Msa0488850 | MtrunA17_Chr6g0486681 | 52.738 | 493 | 230 | 3 | 15 | 506 | 18 | 508 | 0.0 | 529 |
| Msa0488850 | MtrunA17_Chr6g0486671 | 52.738 | 493 | 230 | 3 | 15 | 506 | 18 | 508 | 0.0 | 529 |
| Msa0488850 | MtrunA17_Chr3g0115711 | 51.509 | 497 | 228 | 6 | 16 | 509 | 16 | 502 | 0.0 | 525 |
| Msa0488850 | MtrunA17_Chr3g0085971 | 53.521 | 497 | 225 | 4 | 15 | 507 | 13 | 507 | 6.76e-180 | 514 |
| Msa0488850 | MtrunA17_Chr8g0390141 | 51.703 | 499 | 235 | 4 | 15 | 509 | 18 | 514 | 2.82e-177 | 508 |
| Msa0488850 | MtrunA17_Chr3g0128171 | 55.211 | 451 | 196 | 3 | 50 | 495 | 1 | 450 | 6.16e-171 | 490 |
| Msa0488850 | MtrunA17_Chr3g0115731 | 47.036 | 506 | 223 | 10 | 8 | 502 | 8 | 479 | 3.90e-159 | 461 |
| Msa0488850 | MtrunA17_Chr3g0078791 | 52.740 | 438 | 180 | 4 | 68 | 502 | 16 | 429 | 7.01e-157 | 453 |
| Msa0488850 | MtrunA17_Chr4g0065351 | 54.386 | 342 | 154 | 2 | 161 | 502 | 1 | 340 | 9.88e-137 | 399 |
| Msa0488850 | MtrunA17_Chr3g0115771 | 37.261 | 314 | 149 | 8 | 151 | 461 | 5 | 273 | 2.73e-62 | 205 |
| Msa0488850 | MtrunA17_Chr6g0485661 | 28.976 | 459 | 294 | 10 | 28 | 476 | 63 | 499 | 6.01e-56 | 195 |
| Msa0488850 | MtrunA17_Chr4g0034681 | 27.054 | 499 | 319 | 10 | 27 | 502 | 34 | 510 | 3.31e-55 | 193 |
| Msa0488850 | MtrunA17_Chr3g0144361 | 28.184 | 479 | 301 | 10 | 27 | 484 | 32 | 488 | 2.53e-54 | 191 |
| Msa0488850 | MtrunA17_Chr8g0390521 | 26.367 | 512 | 336 | 10 | 10 | 505 | 3 | 489 | 3.39e-53 | 187 |
| Msa0488850 | MtrunA17_Chr8g0373531 | 29.124 | 491 | 303 | 12 | 28 | 496 | 24 | 491 | 4.11e-52 | 184 |
| Msa0488850 | MtrunA17_Chr4g0021771 | 26.205 | 477 | 318 | 9 | 23 | 490 | 55 | 506 | 6.83e-51 | 181 |
| Msa0488850 | MtrunA17_Chr4g0036021 | 26.283 | 487 | 317 | 10 | 27 | 495 | 31 | 493 | 2.28e-50 | 180 |
| Msa0488850 | MtrunA17_Chr5g0432581 | 27.530 | 494 | 315 | 10 | 18 | 490 | 14 | 485 | 8.97e-50 | 178 |
| Msa0488850 | MtrunA17_Chr2g0282031 | 27.941 | 476 | 305 | 12 | 24 | 488 | 53 | 501 | 2.32e-48 | 174 |
| Msa0488850 | MtrunA17_Chr4g0065341 | 55.405 | 148 | 63 | 2 | 7 | 152 | 9 | 155 | 3.67e-48 | 164 |
| Msa0488850 | MtrunA17_Chr1g0213611 | 27.403 | 489 | 315 | 12 | 20 | 495 | 75 | 536 | 7.54e-47 | 171 |
| Msa0488850 | MtrunA17_Chr4g0039651 | 28.661 | 478 | 298 | 10 | 24 | 484 | 46 | 497 | 3.25e-46 | 168 |
| Msa0488850 | MtrunA17_Chr7g0214451 | 26.598 | 485 | 320 | 12 | 20 | 495 | 30 | 487 | 2.64e-45 | 166 |
| Msa0488850 | MtrunA17_Chr1g0213631 | 28.354 | 395 | 269 | 9 | 103 | 490 | 48 | 435 | 4.60e-44 | 161 |
| Msa0488850 | MtrunA17_Chr5g0446681 | 57.812 | 128 | 54 | 0 | 375 | 502 | 157 | 284 | 1.69e-41 | 150 |
| Msa0488850 | MtrunA17_Chr5g0446681 | 43.646 | 181 | 66 | 2 | 13 | 193 | 12 | 156 | 8.32e-35 | 132 |
| Msa0488850 | MtrunA17_Chr7g0250881 | 25.780 | 481 | 323 | 11 | 6 | 485 | 53 | 500 | 7.07e-41 | 154 |
| Msa0488850 | MtrunA17_Chr6g0457781 | 26.763 | 482 | 317 | 10 | 6 | 485 | 93 | 540 | 1.74e-40 | 153 |
| Msa0488850 | MtrunA17_Chr5g0403831 | 27.111 | 450 | 294 | 11 | 65 | 490 | 59 | 498 | 7.96e-40 | 150 |
| Msa0488850 | MtrunA17_Chr4g0032021 | 27.869 | 488 | 294 | 11 | 23 | 484 | 96 | 551 | 3.00e-39 | 150 |
| Msa0488850 | MtrunA17_Chr4g0066581 | 27.292 | 480 | 312 | 12 | 8 | 484 | 38 | 483 | 4.38e-39 | 148 |
| Msa0488850 | MtrunA17_Chr8g0373181 | 26.216 | 473 | 301 | 11 | 23 | 484 | 47 | 482 | 7.27e-37 | 142 |
| Msa0488850 | MtrunA17_Chr7g0273281 | 26.316 | 494 | 309 | 11 | 8 | 484 | 37 | 492 | 3.35e-36 | 140 |
| Msa0488850 | MtrunA17_Chr1g0155221 | 25.470 | 479 | 317 | 10 | 18 | 488 | 43 | 489 | 1.62e-34 | 135 |
| Msa0488850 | MtrunA17_Chr2g0286721 | 26.033 | 484 | 313 | 12 | 8 | 484 | 35 | 480 | 1.91e-34 | 135 |
| Msa0488850 | MtrunA17_Chr7g0228781 | 40.984 | 183 | 72 | 3 | 6 | 152 | 21 | 203 | 4.58e-34 | 127 |
| Msa0488850 | MtrunA17_Chr2g0303701 | 31.268 | 339 | 203 | 9 | 20 | 351 | 23 | 338 | 6.93e-34 | 135 |
| Msa0488850 | MtrunA17_Chr2g0303731 | 31.792 | 346 | 199 | 12 | 20 | 353 | 23 | 343 | 4.50e-33 | 132 |
| Msa0488850 | MtrunA17_Chr8g0376631 | 31.105 | 344 | 204 | 11 | 20 | 353 | 23 | 343 | 8.56e-33 | 131 |
| Msa0488850 | MtrunA17_Chr8g0373191 | 25.696 | 467 | 291 | 11 | 23 | 484 | 39 | 454 | 7.58e-32 | 127 |
| Msa0488850 | MtrunA17_Chr2g0290181 | 28.232 | 379 | 234 | 10 | 20 | 381 | 24 | 381 | 2.39e-31 | 127 |
| Msa0488850 | MtrunA17_Chr2g0290181 | 32.075 | 106 | 71 | 1 | 387 | 491 | 455 | 560 | 3.08e-11 | 65.9 |
| Msa0488850 | MtrunA17_Chr4g0004821 | 26.065 | 399 | 267 | 8 | 95 | 484 | 90 | 469 | 4.21e-31 | 125 |
| Msa0488850 | MtrunA17_Chr7g0259471 | 25.581 | 430 | 294 | 9 | 62 | 484 | 60 | 470 | 1.47e-30 | 124 |
| Msa0488850 | MtrunA17_Chr8g0376611 | 32.296 | 257 | 162 | 6 | 103 | 351 | 22 | 274 | 6.90e-29 | 119 |
| Msa0488850 | MtrunA17_Chr8g0376601 | 27.616 | 344 | 216 | 10 | 18 | 351 | 21 | 341 | 9.32e-29 | 119 |
| Msa0488850 | MtrunA17_Chr3g0119401 | 22.894 | 463 | 322 | 12 | 28 | 485 | 98 | 530 | 4.32e-28 | 117 |
| Msa0488850 | MtrunA17_Chr3g0115761 | 51.456 | 103 | 49 | 1 | 50 | 152 | 1 | 102 | 9.50e-28 | 107 |
| Msa0488850 | MtrunA17_Chr6g0486021 | 23.980 | 392 | 286 | 6 | 94 | 484 | 103 | 483 | 4.64e-27 | 114 |
| Msa0488850 | MtrunA17_Chr7g0259221 | 25.980 | 408 | 275 | 10 | 85 | 484 | 84 | 472 | 6.16e-26 | 110 |
| Msa0488850 | MtrunA17_Chr2g0290161 | 28.866 | 291 | 165 | 8 | 99 | 378 | 19 | 278 | 1.16e-23 | 103 |
| Msa0488850 | MtrunA17_Chr3g0121674 | 26.263 | 297 | 199 | 8 | 205 | 490 | 2 | 289 | 1.42e-22 | 98.2 |
| Msa0488850 | MtrunA17_Chr7g0273261 | 30.000 | 210 | 138 | 4 | 276 | 484 | 33 | 234 | 4.75e-19 | 87.0 |
| Msa0488850 | MtrunA17_Chr5g0434231 | 30.337 | 178 | 97 | 2 | 82 | 259 | 4 | 154 | 7.85e-19 | 83.6 |
| Msa0488850 | MtrunA17_Chr5g0407441 | 27.386 | 241 | 152 | 6 | 23 | 261 | 4 | 223 | 8.75e-17 | 83.6 |
| Msa0488850 | MtrunA17_Chr3g0146061 | 30.636 | 173 | 117 | 3 | 91 | 262 | 54 | 224 | 2.90e-16 | 82.0 |
| Msa0488850 | MtrunA17_Chr3g0144261 | 30.412 | 194 | 128 | 4 | 74 | 262 | 31 | 222 | 1.56e-15 | 79.7 |
| Msa0488850 | MtrunA17_Chr3g0144261 | 26.033 | 242 | 160 | 6 | 257 | 481 | 472 | 711 | 8.47e-11 | 64.7 |
| Msa0488850 | MtrunA17_Chr8g0370141 | 26.540 | 211 | 145 | 4 | 78 | 280 | 41 | 249 | 3.38e-14 | 74.3 |
| Msa0488850 | MtrunA17_Chr5g0419321 | 26.590 | 173 | 124 | 3 | 90 | 261 | 81 | 251 | 4.06e-14 | 75.1 |
| Msa0488850 | MtrunA17_Chr5g0404191 | 24.521 | 261 | 167 | 6 | 23 | 281 | 50 | 282 | 3.32e-13 | 70.5 |
| Msa0488850 | MtrunA17_Chr1g0211861 | 46.575 | 73 | 37 | 1 | 338 | 408 | 21 | 93 | 7.56e-13 | 65.1 |
| Msa0488850 | MtrunA17_Chr8g0370151 | 28.571 | 224 | 142 | 5 | 270 | 481 | 125 | 342 | 3.21e-12 | 68.2 |
| Msa0488850 | MtrunA17_Chr5g0434251 | 30.081 | 123 | 81 | 2 | 383 | 500 | 34 | 156 | 9.44e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0488850 | AT5G61520.1 | 61.837 | 490 | 178 | 4 | 17 | 500 | 18 | 504 | 0.0 | 613 |
| Msa0488850 | AT5G26340.1 | 58.704 | 494 | 200 | 4 | 9 | 499 | 9 | 501 | 0.0 | 607 |
| Msa0488850 | AT3G19930.1 | 60.816 | 490 | 188 | 3 | 13 | 500 | 13 | 500 | 0.0 | 604 |
| Msa0488850 | AT3G19930.2 | 60.816 | 490 | 188 | 3 | 13 | 500 | 13 | 500 | 0.0 | 604 |
| Msa0488850 | AT4G02050.2 | 57.938 | 485 | 201 | 3 | 15 | 499 | 19 | 500 | 0.0 | 599 |
| Msa0488850 | AT4G02050.1 | 57.938 | 485 | 201 | 3 | 15 | 499 | 19 | 500 | 0.0 | 599 |
| Msa0488850 | AT3G19940.1 | 58.367 | 490 | 199 | 4 | 19 | 505 | 21 | 508 | 0.0 | 594 |
| Msa0488850 | AT1G11260.1 | 58.182 | 495 | 203 | 2 | 8 | 499 | 8 | 501 | 0.0 | 592 |
| Msa0488850 | AT1G50310.1 | 57.320 | 485 | 202 | 4 | 19 | 500 | 21 | 503 | 0.0 | 580 |
| Msa0488850 | AT5G23270.1 | 58.163 | 490 | 201 | 3 | 9 | 495 | 10 | 498 | 0.0 | 577 |
| Msa0488850 | AT5G61520.2 | 61.572 | 458 | 167 | 4 | 49 | 500 | 2 | 456 | 0.0 | 568 |
| Msa0488850 | AT4G21480.1 | 57.256 | 503 | 209 | 3 | 1 | 500 | 1 | 500 | 0.0 | 562 |
| Msa0488850 | AT1G77210.2 | 50.920 | 489 | 237 | 3 | 15 | 502 | 18 | 504 | 0.0 | 525 |
| Msa0488850 | AT1G77210.1 | 50.920 | 489 | 237 | 3 | 15 | 502 | 18 | 504 | 0.0 | 525 |
| Msa0488850 | AT1G34580.1 | 51.303 | 499 | 231 | 7 | 4 | 495 | 6 | 499 | 0.0 | 523 |
| Msa0488850 | AT5G26250.1 | 49.020 | 510 | 249 | 7 | 1 | 507 | 1 | 502 | 6.70e-172 | 494 |
| Msa0488850 | AT1G34580.2 | 50.993 | 453 | 211 | 6 | 50 | 495 | 1 | 449 | 5.71e-165 | 475 |
| Msa0488850 | AT1G07340.1 | 50.996 | 502 | 239 | 6 | 1 | 499 | 1 | 498 | 3.64e-164 | 474 |
| Msa0488850 | AT3G05960.1 | 47.023 | 487 | 254 | 4 | 10 | 495 | 8 | 491 | 4.84e-163 | 472 |
| Msa0488850 | AT1G50310.2 | 56.250 | 352 | 149 | 4 | 152 | 500 | 11 | 360 | 6.02e-144 | 418 |
| Msa0488850 | AT1G77210.3 | 50.284 | 352 | 172 | 3 | 152 | 502 | 6 | 355 | 2.07e-126 | 373 |
| Msa0488850 | AT4G36670.1 | 30.435 | 506 | 294 | 15 | 25 | 505 | 18 | 490 | 3.59e-59 | 203 |
| Msa0488850 | AT2G18480.1 | 29.263 | 475 | 285 | 12 | 37 | 487 | 36 | 483 | 2.13e-56 | 196 |
| Msa0488850 | AT3G18830.1 | 28.515 | 505 | 314 | 12 | 27 | 509 | 40 | 519 | 3.17e-56 | 196 |
| Msa0488850 | AT2G16120.1 | 28.893 | 488 | 308 | 8 | 27 | 495 | 30 | 497 | 2.87e-55 | 193 |
| Msa0488850 | AT2G16130.1 | 28.657 | 499 | 317 | 8 | 16 | 495 | 19 | 497 | 5.32e-55 | 192 |
| Msa0488850 | AT3G05165.3 | 26.582 | 474 | 307 | 11 | 16 | 484 | 23 | 460 | 3.44e-43 | 159 |
| Msa0488850 | AT3G05165.2 | 26.582 | 474 | 307 | 11 | 16 | 484 | 23 | 460 | 3.44e-43 | 159 |
| Msa0488850 | AT3G05165.1 | 26.582 | 474 | 307 | 11 | 16 | 484 | 23 | 460 | 3.44e-43 | 159 |
| Msa0488850 | AT5G17010.1 | 28.302 | 477 | 301 | 12 | 24 | 484 | 48 | 499 | 1.81e-42 | 158 |
| Msa0488850 | AT5G17010.3 | 28.302 | 477 | 301 | 12 | 24 | 484 | 48 | 499 | 1.81e-42 | 158 |
| Msa0488850 | AT5G17010.4 | 28.302 | 477 | 301 | 12 | 24 | 484 | 48 | 499 | 1.81e-42 | 158 |
| Msa0488850 | AT5G27360.1 | 25.413 | 484 | 320 | 8 | 6 | 484 | 18 | 465 | 4.43e-42 | 157 |
| Msa0488850 | AT5G27360.3 | 25.413 | 484 | 320 | 8 | 6 | 484 | 66 | 513 | 1.70e-41 | 156 |
| Msa0488850 | AT2G20780.1 | 25.208 | 480 | 328 | 11 | 11 | 484 | 43 | 497 | 2.20e-41 | 155 |
| Msa0488850 | AT5G27350.1 | 27.234 | 470 | 305 | 11 | 18 | 484 | 26 | 461 | 2.45e-41 | 154 |
| Msa0488850 | AT2G43330.1 | 25.157 | 477 | 319 | 9 | 27 | 492 | 35 | 484 | 1.14e-40 | 153 |
| Msa0488850 | AT5G59250.1 | 27.743 | 483 | 301 | 10 | 23 | 484 | 98 | 553 | 3.94e-40 | 153 |
| Msa0488850 | AT3G05150.2 | 26.186 | 485 | 316 | 10 | 6 | 484 | 18 | 466 | 1.60e-39 | 150 |
| Msa0488850 | AT2G20780.2 | 26.340 | 429 | 299 | 10 | 66 | 488 | 26 | 443 | 1.64e-39 | 149 |
| Msa0488850 | AT3G05150.1 | 26.186 | 485 | 316 | 10 | 6 | 484 | 18 | 466 | 1.73e-39 | 149 |
| Msa0488850 | AT3G05150.3 | 26.186 | 485 | 316 | 10 | 6 | 484 | 18 | 466 | 1.73e-39 | 149 |
| Msa0488850 | AT5G16150.2 | 24.896 | 482 | 324 | 11 | 6 | 484 | 93 | 539 | 1.06e-38 | 149 |
| Msa0488850 | AT5G16150.1 | 24.896 | 482 | 324 | 11 | 6 | 484 | 93 | 539 | 1.06e-38 | 149 |
| Msa0488850 | AT5G16150.3 | 24.896 | 482 | 324 | 11 | 6 | 484 | 93 | 539 | 1.06e-38 | 149 |
| Msa0488850 | AT3G03090.1 | 27.719 | 469 | 300 | 10 | 31 | 484 | 55 | 499 | 1.78e-38 | 147 |
| Msa0488850 | AT1G08900.5 | 26.355 | 406 | 276 | 8 | 85 | 484 | 25 | 413 | 2.93e-38 | 145 |
| Msa0488850 | AT5G27360.2 | 27.500 | 360 | 240 | 5 | 130 | 484 | 18 | 361 | 3.65e-38 | 144 |
| Msa0488850 | AT5G27360.5 | 27.500 | 360 | 240 | 5 | 130 | 484 | 18 | 361 | 3.65e-38 | 144 |
| Msa0488850 | AT1G08900.3 | 26.355 | 406 | 276 | 8 | 85 | 484 | 59 | 447 | 5.77e-38 | 145 |
| Msa0488850 | AT1G08900.1 | 26.355 | 406 | 276 | 8 | 85 | 484 | 67 | 455 | 7.09e-38 | 145 |
| Msa0488850 | AT1G08900.2 | 26.355 | 406 | 276 | 8 | 85 | 484 | 67 | 455 | 7.09e-38 | 145 |
| Msa0488850 | AT3G05160.1 | 25.212 | 472 | 316 | 10 | 16 | 484 | 14 | 451 | 8.13e-38 | 144 |
| Msa0488850 | AT1G08890.1 | 26.799 | 403 | 280 | 7 | 85 | 485 | 69 | 458 | 1.81e-37 | 144 |
| Msa0488850 | AT3G05160.3 | 26.238 | 404 | 283 | 7 | 83 | 484 | 12 | 402 | 2.36e-37 | 142 |
| Msa0488850 | AT3G05160.2 | 26.238 | 404 | 283 | 7 | 83 | 484 | 12 | 402 | 2.36e-37 | 142 |
| Msa0488850 | AT1G08930.1 | 25.474 | 475 | 307 | 11 | 18 | 484 | 53 | 488 | 2.84e-37 | 144 |
| Msa0488850 | AT1G08930.2 | 25.474 | 475 | 307 | 11 | 18 | 484 | 53 | 488 | 2.84e-37 | 144 |
| Msa0488850 | AT1G54730.2 | 26.767 | 467 | 289 | 9 | 29 | 484 | 38 | 462 | 3.12e-37 | 143 |
| Msa0488850 | AT1G75220.1 | 26.415 | 477 | 314 | 11 | 18 | 488 | 42 | 487 | 3.65e-37 | 143 |
| Msa0488850 | AT5G18840.1 | 27.479 | 484 | 303 | 14 | 16 | 490 | 37 | 481 | 8.68e-37 | 142 |
| Msa0488850 | AT3G05165.6 | 25.951 | 447 | 290 | 11 | 16 | 457 | 23 | 433 | 2.75e-36 | 141 |
| Msa0488850 | AT3G05155.1 | 25.212 | 472 | 316 | 11 | 16 | 485 | 20 | 456 | 6.89e-36 | 139 |
| Msa0488850 | AT3G05165.4 | 26.683 | 416 | 264 | 11 | 16 | 426 | 23 | 402 | 1.75e-35 | 138 |
| Msa0488850 | AT3G05165.5 | 26.683 | 416 | 264 | 11 | 16 | 426 | 23 | 402 | 1.75e-35 | 138 |
| Msa0488850 | AT3G05400.1 | 25.370 | 473 | 314 | 12 | 16 | 484 | 19 | 456 | 4.96e-35 | 137 |
| Msa0488850 | AT2G48020.2 | 25.806 | 496 | 315 | 11 | 2 | 486 | 7 | 460 | 1.38e-34 | 135 |
| Msa0488850 | AT2G48020.1 | 25.806 | 496 | 315 | 11 | 2 | 486 | 7 | 460 | 1.38e-34 | 135 |
| Msa0488850 | AT1G19450.1 | 27.557 | 479 | 306 | 13 | 18 | 488 | 43 | 488 | 5.10e-34 | 134 |
| Msa0488850 | AT1G30220.1 | 29.360 | 344 | 210 | 11 | 20 | 353 | 25 | 345 | 9.69e-33 | 132 |
| Msa0488850 | AT1G30220.1 | 33.051 | 118 | 74 | 2 | 383 | 495 | 451 | 568 | 9.64e-11 | 64.7 |
| Msa0488850 | AT3G05400.2 | 24.736 | 473 | 297 | 13 | 16 | 484 | 19 | 436 | 1.00e-32 | 130 |
| Msa0488850 | AT4G04750.1 | 26.458 | 480 | 313 | 13 | 16 | 490 | 30 | 474 | 2.76e-32 | 129 |
| Msa0488850 | AT4G04750.2 | 26.458 | 480 | 313 | 13 | 16 | 490 | 30 | 474 | 2.76e-32 | 129 |
| Msa0488850 | AT4G04750.3 | 26.829 | 410 | 283 | 9 | 85 | 490 | 122 | 518 | 4.80e-32 | 129 |
| Msa0488850 | AT1G54730.3 | 26.588 | 425 | 259 | 9 | 29 | 442 | 38 | 420 | 8.26e-32 | 127 |
| Msa0488850 | AT4G04760.1 | 25.157 | 477 | 309 | 11 | 24 | 490 | 32 | 470 | 3.66e-31 | 126 |
| Msa0488850 | AT1G54730.5 | 25.482 | 467 | 274 | 10 | 29 | 484 | 38 | 441 | 5.16e-31 | 125 |
| Msa0488850 | AT1G05030.1 | 24.892 | 462 | 309 | 12 | 29 | 484 | 85 | 514 | 9.49e-31 | 125 |
| Msa0488850 | AT4G04760.3 | 25.542 | 415 | 283 | 8 | 85 | 490 | 14 | 411 | 1.20e-30 | 124 |
| Msa0488850 | AT1G05030.2 | 25.061 | 411 | 291 | 9 | 79 | 484 | 64 | 462 | 2.57e-30 | 124 |
| Msa0488850 | AT1G08900.4 | 25.549 | 364 | 248 | 8 | 85 | 442 | 67 | 413 | 5.68e-30 | 122 |
| Msa0488850 | AT4G16480.2 | 28.732 | 355 | 212 | 10 | 20 | 360 | 24 | 351 | 1.25e-29 | 122 |
| Msa0488850 | AT4G16480.2 | 27.083 | 144 | 96 | 3 | 352 | 486 | 416 | 559 | 4.14e-11 | 65.9 |
| Msa0488850 | AT4G16480.3 | 28.732 | 355 | 212 | 10 | 20 | 360 | 24 | 351 | 1.25e-29 | 122 |
| Msa0488850 | AT4G16480.3 | 27.083 | 144 | 96 | 3 | 352 | 486 | 416 | 559 | 4.14e-11 | 65.9 |
| Msa0488850 | AT4G16480.1 | 28.732 | 355 | 212 | 10 | 20 | 360 | 24 | 351 | 1.25e-29 | 122 |
| Msa0488850 | AT4G16480.1 | 27.083 | 144 | 96 | 3 | 352 | 486 | 416 | 559 | 4.14e-11 | 65.9 |
| Msa0488850 | AT2G35740.1 | 28.205 | 351 | 217 | 10 | 21 | 360 | 24 | 350 | 1.49e-29 | 122 |
| Msa0488850 | AT2G35740.1 | 31.532 | 111 | 75 | 1 | 382 | 491 | 453 | 563 | 1.66e-11 | 67.0 |
| Msa0488850 | AT4G04760.2 | 25.364 | 481 | 298 | 13 | 24 | 489 | 32 | 466 | 4.01e-29 | 120 |
| Msa0488850 | AT1G67300.2 | 24.510 | 408 | 265 | 8 | 95 | 484 | 105 | 487 | 6.24e-29 | 120 |
| Msa0488850 | AT1G67300.1 | 24.265 | 408 | 265 | 8 | 95 | 484 | 105 | 486 | 1.11e-28 | 119 |
| Msa0488850 | AT1G67300.3 | 24.265 | 408 | 265 | 8 | 95 | 484 | 105 | 486 | 1.11e-28 | 119 |
| Msa0488850 | AT1G08920.1 | 22.199 | 473 | 325 | 9 | 18 | 484 | 27 | 462 | 3.59e-28 | 117 |
| Msa0488850 | AT5G27360.4 | 23.810 | 420 | 279 | 8 | 6 | 420 | 18 | 401 | 1.06e-27 | 115 |
| Msa0488850 | AT1G08920.2 | 22.708 | 480 | 321 | 11 | 18 | 484 | 27 | 469 | 1.35e-27 | 115 |
| Msa0488850 | AT1G67300.6 | 24.438 | 356 | 226 | 7 | 95 | 433 | 105 | 434 | 2.51e-27 | 114 |
| Msa0488850 | AT1G67300.7 | 24.438 | 356 | 226 | 7 | 95 | 433 | 105 | 434 | 2.51e-27 | 114 |
| Msa0488850 | AT1G67300.4 | 24.713 | 348 | 219 | 7 | 95 | 425 | 105 | 426 | 9.35e-27 | 112 |
| Msa0488850 | AT1G67300.5 | 24.713 | 348 | 219 | 7 | 95 | 425 | 105 | 426 | 9.35e-27 | 112 |
| Msa0488850 | AT1G79820.2 | 25.432 | 405 | 262 | 14 | 95 | 484 | 108 | 487 | 1.24e-25 | 110 |
| Msa0488850 | AT1G79820.1 | 25.432 | 405 | 262 | 14 | 95 | 484 | 108 | 487 | 1.24e-25 | 110 |
| Msa0488850 | AT1G54730.4 | 25.176 | 425 | 244 | 10 | 29 | 442 | 38 | 399 | 1.47e-25 | 109 |
| Msa0488850 | AT1G54730.9 | 26.065 | 399 | 238 | 10 | 29 | 414 | 38 | 392 | 1.27e-24 | 106 |
| Msa0488850 | AT1G54730.7 | 26.065 | 399 | 238 | 10 | 29 | 414 | 38 | 392 | 1.27e-24 | 106 |
| Msa0488850 | AT1G08920.3 | 21.379 | 435 | 299 | 9 | 18 | 446 | 27 | 424 | 6.01e-23 | 102 |
| Msa0488850 | AT3G05155.2 | 24.412 | 340 | 221 | 10 | 16 | 353 | 20 | 325 | 1.14e-22 | 99.4 |
| Msa0488850 | AT5G17010.2 | 23.689 | 515 | 268 | 16 | 7 | 484 | 10 | 436 | 6.06e-22 | 99.0 |
| Msa0488850 | AT1G79820.4 | 24.348 | 345 | 238 | 10 | 95 | 433 | 108 | 435 | 4.03e-21 | 96.3 |
| Msa0488850 | AT1G54730.11 | 26.786 | 336 | 195 | 8 | 29 | 353 | 38 | 333 | 6.51e-21 | 94.4 |
| Msa0488850 | AT3G20460.1 | 21.782 | 404 | 297 | 7 | 85 | 484 | 95 | 483 | 1.41e-20 | 95.1 |
| Msa0488850 | AT1G54730.8 | 24.561 | 399 | 223 | 11 | 29 | 414 | 38 | 371 | 1.12e-18 | 88.6 |
| Msa0488850 | AT2G48020.3 | 24.800 | 375 | 235 | 10 | 2 | 368 | 7 | 342 | 6.38e-18 | 85.9 |
| Msa0488850 | AT1G54730.10 | 25.559 | 313 | 185 | 7 | 29 | 330 | 38 | 313 | 7.59e-18 | 85.1 |
| Msa0488850 | AT1G54730.6 | 25.559 | 313 | 185 | 7 | 29 | 330 | 38 | 313 | 7.59e-18 | 85.1 |
| Msa0488850 | AT2G48020.4 | 24.802 | 379 | 235 | 11 | 2 | 372 | 7 | 343 | 1.99e-17 | 84.7 |
| Msa0488850 | AT3G51490.1 | 26.141 | 241 | 157 | 7 | 23 | 262 | 4 | 224 | 5.16e-17 | 84.7 |
| Msa0488850 | AT3G51490.2 | 26.141 | 241 | 157 | 7 | 23 | 262 | 4 | 224 | 5.73e-17 | 84.7 |
| Msa0488850 | AT3G51490.2 | 26.271 | 236 | 152 | 7 | 261 | 481 | 486 | 714 | 5.08e-12 | 68.9 |
| Msa0488850 | AT1G79820.3 | 21.465 | 396 | 241 | 9 | 95 | 484 | 108 | 439 | 3.51e-16 | 81.3 |
| Msa0488850 | AT3G51490.3 | 28.902 | 173 | 120 | 3 | 91 | 262 | 4 | 174 | 3.60e-16 | 82.0 |
| Msa0488850 | AT3G51490.3 | 26.271 | 236 | 152 | 7 | 261 | 481 | 436 | 664 | 5.91e-12 | 68.6 |
| Msa0488850 | AT1G20840.2 | 31.056 | 161 | 108 | 3 | 103 | 262 | 64 | 222 | 2.03e-14 | 76.6 |
| Msa0488850 | AT1G20840.1 | 31.056 | 161 | 108 | 3 | 103 | 262 | 64 | 222 | 2.03e-14 | 76.6 |
| Msa0488850 | AT4G35300.4 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.51e-13 | 72.0 |
| Msa0488850 | AT4G35300.8 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.51e-13 | 72.0 |
| Msa0488850 | AT4G35300.6 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.51e-13 | 72.0 |
| Msa0488850 | AT4G35300.11 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.51e-13 | 72.0 |
| Msa0488850 | AT4G35300.1 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.51e-13 | 72.0 |
| Msa0488850 | AT4G35300.10 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.51e-13 | 72.0 |
| Msa0488850 | AT4G35300.7 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.51e-13 | 72.0 |
| Msa0488850 | AT4G35300.9 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.61e-13 | 72.0 |
| Msa0488850 | AT4G35300.2 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.61e-13 | 72.0 |
| Msa0488850 | AT4G35300.3 | 29.480 | 173 | 119 | 3 | 91 | 262 | 54 | 224 | 5.61e-13 | 72.0 |
Find 90 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATGCTGTTTGGTGTTTC+TGG | 0.080373 | 3_4:-8993249 | None:intergenic |
| ATTGGAACATTCTTGGTTTC+TGG | 0.128771 | 3_4:-8993999 | None:intergenic |
| CTTTGTAAGATGTTCTTAAA+TGG | 0.219318 | 3_4:-8993396 | None:intergenic |
| AACATCATGTGTACCTCTTA+TGG | 0.246160 | 3_4:-8993316 | None:intergenic |
| GCCATTTCTGATAGATATAA+TGG | 0.247787 | 3_4:-8993045 | None:intergenic |
| ATACTTGGTCGTGTTCTTCT+TGG | 0.258509 | 3_4:+8992207 | Msa0488850:CDS |
| AAATAGGATTGGAGCATAAA+AGG | 0.275402 | 3_4:-8993493 | None:intergenic |
| GGTTATGATATAGGAATTTC+AGG | 0.277570 | 3_4:+8991045 | Msa0488850:CDS |
| TGGAATTGGCTTTGCTAATC+AGG | 0.280534 | 3_4:+8992233 | Msa0488850:CDS |
| GGTGGTGCTGCATTCCTTAT+TGG | 0.287192 | 3_4:+8992144 | Msa0488850:CDS |
| TTGCTCAATTGGAACATTCT+TGG | 0.300336 | 3_4:-8994006 | None:intergenic |
| ATGTTATGTCATTTCAAGTA+TGG | 0.305249 | 3_4:+8993915 | Msa0488850:CDS |
| ATTATCTTCGGTTATGATAT+AGG | 0.305759 | 3_4:+8991036 | Msa0488850:CDS |
| ACCCTATCCATTTGCTCAAT+TGG | 0.305882 | 3_4:-8994017 | None:intergenic |
| CTTGTTGTCTTGTTTCATCT+TGG | 0.317999 | 3_4:-8991986 | None:intergenic |
| ACATGATACTTGCTTCAATA+AGG | 0.321693 | 3_4:-8993356 | None:intergenic |
| GTTCTTCTTGGAGTTGGAAT+TGG | 0.324453 | 3_4:+8992219 | Msa0488850:CDS |
| CCAGCTTTAATCCTCACTTT+AGG | 0.346251 | 3_4:+8993213 | Msa0488850:CDS |
| TATTGTGATTCTCTCTTGTA+TGG | 0.347026 | 3_4:+8990996 | Msa0488850:CDS |
| TCTTGTATGGTGGCTGCCAC+TGG | 0.347170 | 3_4:+8991009 | Msa0488850:CDS |
| AAGCAAAGAAAGATGCTAAA+AGG | 0.350210 | 3_4:-8992077 | None:intergenic |
| TTGATTGCTCCTCTATATCT+TGG | 0.356231 | 3_4:-8993072 | None:intergenic |
| CCTCTTCCATTGCTTGCAAT+TGG | 0.356504 | 3_4:-8990952 | None:intergenic |
| CATTGATTCCTGTGAATTGT+TGG | 0.356994 | 3_4:-8993464 | None:intergenic |
| TTCATCTTGGTGTATACATC+TGG | 0.359272 | 3_4:-8991973 | None:intergenic |
| TTCTTCTCACAAATTCTAAT+AGG | 0.359757 | 3_4:+8993660 | Msa0488850:CDS |
| TTGATATGCATTTATGTTGC+CGG | 0.361579 | 3_4:+8993753 | Msa0488850:CDS |
| CACCAAGAGCTGCTCCAATA+AGG | 0.370888 | 3_4:-8992158 | None:intergenic |
| TTCCTTATTGGAGCAGCTCT+TGG | 0.384601 | 3_4:+8992156 | Msa0488850:CDS |
| TTGAGCAAATGGATAGGGTT+TGG | 0.386241 | 3_4:+8994021 | Msa0488850:CDS |
| ATATAGACCTCAACTTGTTA+TGG | 0.392956 | 3_4:+8993422 | Msa0488850:CDS |
| TTGCCGGATTTGCTTGGTCA+TGG | 0.394117 | 3_4:+8993769 | Msa0488850:CDS |
| TTATGCTGTTTGGTGTTTCT+GGG | 0.396973 | 3_4:-8993248 | None:intergenic |
| AGAAAAGATCAAAGACGATT+GGG | 0.404608 | 3_4:+8993158 | Msa0488850:CDS |
| GCACCACCTACAAGAATTGA+TGG | 0.406112 | 3_4:-8992129 | None:intergenic |
| TGCCGGATTTGCTTGGTCAT+GGG | 0.407730 | 3_4:+8993770 | Msa0488850:CDS |
| TCAGCAAATTTAATCAACTT+TGG | 0.419401 | 3_4:+8993132 | Msa0488850:CDS |
| GAATGTTCCAATTGAGCAAA+TGG | 0.420157 | 3_4:+8994010 | Msa0488850:CDS |
| GCAGTTATGGTAGGGATTGT+AGG | 0.422925 | 3_4:+8993555 | Msa0488850:CDS |
| CCCATTATATCTATCAGAAA+TGG | 0.423439 | 3_4:+8993044 | Msa0488850:CDS |
| TCATCAATCACAAGAGCCTT+TGG | 0.425277 | 3_4:+8992099 | Msa0488850:CDS |
| GGTCGTGTTCTTCTTGGAGT+TGG | 0.425536 | 3_4:+8992213 | Msa0488850:CDS |
| GCCACTGGAGGCATTATCTT+CGG | 0.431033 | 3_4:+8991024 | Msa0488850:CDS |
| AATTCTAATAGGAAGTATAA+TGG | 0.436111 | 3_4:+8993671 | Msa0488850:CDS |
| TTCCAACTATGTGTTGGAAT+TGG | 0.441232 | 3_4:+8993102 | Msa0488850:CDS |
| CTTATTGGAGCAGCTCTTGG+TGG | 0.464561 | 3_4:+8992159 | Msa0488850:CDS |
| CTAGGAACCAACCATCCTAA+TGG | 0.475289 | 3_4:-8993795 | None:intergenic |
| CACCAATTCCAACACATAGT+TGG | 0.481665 | 3_4:-8993104 | None:intergenic |
| CCATTTCTGATAGATATAAT+GGG | 0.482018 | 3_4:-8993044 | None:intergenic |
| GCCGGATTTGCTTGGTCATG+GGG | 0.494733 | 3_4:+8993771 | Msa0488850:CDS |
| TGATGTTCAACAAGAATTTG+AGG | 0.494949 | 3_4:+8993332 | Msa0488850:CDS |
| TCCAATTGAGCAAATGGATA+GGG | 0.497217 | 3_4:+8994016 | Msa0488850:CDS |
| ATTGTTGGAGACAAGATTGA+AGG | 0.501127 | 3_4:+8994068 | Msa0488850:CDS |
| CAGAAAAGATCAAAGACGAT+TGG | 0.503847 | 3_4:+8993157 | Msa0488850:CDS |
| TGCAGGTGGTGTAACATCAA+TGG | 0.504221 | 3_4:+8991927 | Msa0488850:intron |
| ATACAAGAGAGAATCACAAT+AGG | 0.504849 | 3_4:-8990994 | None:intergenic |
| GTGATGAAGTGAATGTTGTT+AGG | 0.505701 | 3_4:-8992041 | None:intergenic |
| TTAATGCTGCAATCCATAAG+AGG | 0.508403 | 3_4:+8993303 | Msa0488850:CDS |
| AGTATAATGGCAGCACAACT+TGG | 0.520104 | 3_4:+8993684 | Msa0488850:CDS |
| ACTTCATCACTATATATAGC+TGG | 0.520261 | 3_4:+8992054 | Msa0488850:CDS |
| ATGGCACTTCCAAGATATAG+AGG | 0.524996 | 3_4:+8993063 | Msa0488850:CDS |
| AATATATACATGCTAATACT+TGG | 0.530434 | 3_4:+8992192 | Msa0488850:CDS |
| GCAGCACAACTTGGTGATCA+TGG | 0.536187 | 3_4:+8993693 | Msa0488850:CDS |
| GAGCTACCAATTGCAAGCAA+TGG | 0.546840 | 3_4:+8990946 | Msa0488850:CDS |
| CGCAAACCATCAATTCTTGT+AGG | 0.548548 | 3_4:+8992123 | Msa0488850:CDS |
| AATGGCTTCCAACTATGTGT+TGG | 0.553875 | 3_4:+8993096 | Msa0488850:CDS |
| CCTAAAGTGAGGATTAAAGC+TGG | 0.553920 | 3_4:-8993213 | None:intergenic |
| TAAAGCTGGAACTGCTGCCA+TGG | 0.554550 | 3_4:-8993199 | None:intergenic |
| AATTGATGGTTTGCGACCAA+AGG | 0.563264 | 3_4:-8992115 | None:intergenic |
| TTTATGTTGCCGGATTTGCT+TGG | 0.566712 | 3_4:+8993763 | Msa0488850:CDS |
| AAGTGAATGTTGTTAGGAGT+TGG | 0.571646 | 3_4:-8992035 | None:intergenic |
| TGTGATTCTCTCTTGTATGG+TGG | 0.579802 | 3_4:+8990999 | Msa0488850:CDS |
| AGATCAAAGACGATTGGGGA+TGG | 0.581178 | 3_4:+8993163 | Msa0488850:CDS |
| TTCCAATTGAGCAAATGGAT+AGG | 0.581303 | 3_4:+8994015 | Msa0488850:CDS |
| TGCAACTGTAATACTTTGCG+CGG | 0.587190 | 3_4:-8993847 | None:intergenic |
| CCAATTGCAAGCAATGGAAG+AGG | 0.588796 | 3_4:+8990952 | Msa0488850:CDS |
| TGTATGGTGGCTGCCACTGG+AGG | 0.591273 | 3_4:+8991012 | Msa0488850:CDS |
| AGCACTTTCACCTAATCCAA+TGG | 0.595224 | 3_4:-8993520 | None:intergenic |
| AGCAATGGAAGAGGATACAA+TGG | 0.603683 | 3_4:+8990961 | Msa0488850:CDS |
| GCTATTGCCATAACAAGTTG+AGG | 0.605625 | 3_4:-8993429 | None:intergenic |
| ATGCTTATAGTCGATAAACT+AGG | 0.611635 | 3_4:+8993600 | Msa0488850:CDS |
| CCGGATTTGCTTGGTCATGG+GGG | 0.615253 | 3_4:+8993772 | Msa0488850:CDS |
| ATGGCGAATTTCTCTAGCCA+TGG | 0.615608 | 3_4:+8993182 | Msa0488850:CDS |
| GACAAAATGCTCCTAAAGTG+AGG | 0.616967 | 3_4:-8993224 | None:intergenic |
| AAACCATCAATTCTTGTAGG+TGG | 0.619483 | 3_4:+8992126 | Msa0488850:CDS |
| GCGGCTGATCTAATCTCCAA+TGG | 0.626357 | 3_4:-8993828 | None:intergenic |
| GAAAAGATCAAAGACGATTG+GGG | 0.630273 | 3_4:+8993159 | Msa0488850:CDS |
| TATAGAGGAGCAATCAACAA+TGG | 0.645205 | 3_4:+8993078 | Msa0488850:CDS |
| ACCGAAGATAATGCCTCCAG+TGG | 0.655294 | 3_4:-8991025 | None:intergenic |
| GATTGAAGGCAAACACACTG+TGG | 0.740057 | 3_4:+8994082 | Msa0488850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCTATAATAACTATATAA+GGG | - | chr3_4:8991377-8991396 | None:intergenic | 10.0% |
| !! | ACTTCAAATTTAAAAATTTA+AGG | - | chr3_4:8991678-8991697 | None:intergenic | 10.0% |
| !! | TAAATATGTAAGTTAATATA+TGG | + | chr3_4:8992379-8992398 | Msa0488850:intron | 10.0% |
| !! | AAATGAAAGTTATAATTAGA+AGG | + | chr3_4:8991323-8991342 | Msa0488850:intron | 15.0% |
| !! | GTATCTATAATAACTATATA+AGG | - | chr3_4:8991378-8991397 | None:intergenic | 15.0% |
| !!! | AAATCTACAGTTTTTTTTAT+AGG | - | chr3_4:8991538-8991557 | None:intergenic | 15.0% |
| !!! | ATTTAAAGATTATTTGGTTT+TGG | - | chr3_4:8991710-8991729 | None:intergenic | 15.0% |
| !! | AGAAAAACATTGTAATATAT+TGG | - | chr3_4:8992271-8992290 | None:intergenic | 15.0% |
| !!! | AATGAATATTTTTATCTAGT+CGG | + | chr3_4:8992473-8992492 | Msa0488850:intron | 15.0% |
| !!! | AAATTTTAAGATGATATCAT+AGG | - | chr3_4:8992773-8992792 | None:intergenic | 15.0% |
| !! | TATGATATCATCTTAAAATT+TGG | + | chr3_4:8992772-8992791 | Msa0488850:intron | 15.0% |
| !!! | TTTTTTTGGAAAAAAATTGT+TGG | + | chr3_4:8994053-8994072 | Msa0488850:CDS | 15.0% |
| !!! | CTTAAATCTTTATTTGATTG+TGG | - | chr3_4:8991146-8991165 | None:intergenic | 20.0% |
| !! | ATATAAGGGATCAAAAATAT+TGG | - | chr3_4:8991363-8991382 | None:intergenic | 20.0% |
| !! | ACTATACAAAATAGATGATA+TGG | + | chr3_4:8991606-8991625 | Msa0488850:intron | 20.0% |
| !! | AAAATTCGTTGAAATTACAT+GGG | + | chr3_4:8991643-8991662 | Msa0488850:intron | 20.0% |
| !! | CTCGTAATTTAAAGATTATT+TGG | - | chr3_4:8991716-8991735 | None:intergenic | 20.0% |
| !! | CAAATAATCTTTAAATTACG+AGG | + | chr3_4:8991714-8991733 | Msa0488850:intron | 20.0% |
| !!! | AAATCCAAAGTTTTTTTACA+TGG | + | chr3_4:8991740-8991759 | Msa0488850:intron | 20.0% |
| !!! | AATCCAAAGTTTTTTTACAT+GGG | + | chr3_4:8991741-8991760 | Msa0488850:intron | 20.0% |
| !! | CAAAAAGAGAAAAAAATTGA+AGG | - | chr3_4:8991909-8991928 | None:intergenic | 20.0% |
| !! | AATATATACATGCTAATACT+TGG | + | chr3_4:8992192-8992211 | Msa0488850:CDS | 20.0% |
| !! | ATAATGAAAATGAGAGATAA+TGG | + | chr3_4:8992313-8992332 | Msa0488850:intron | 20.0% |
| !! | CACTAAAATTTCTAAATATG+TGG | - | chr3_4:8992350-8992369 | None:intergenic | 20.0% |
| !! | ACTAAAAAATAAAGTGTGTT+CGG | - | chr3_4:8992508-8992527 | None:intergenic | 20.0% |
| !! | TGTACAAAAGAAAATTAAGT+GGG | - | chr3_4:8992642-8992661 | None:intergenic | 20.0% |
| !! | TTGTACAAAAGAAAATTAAG+TGG | - | chr3_4:8992643-8992662 | None:intergenic | 20.0% |
| !! | ACATTAACATAAACTTTAGA+TGG | + | chr3_4:8992991-8993010 | Msa0488850:intron | 20.0% |
| !!! | AATTCTAATAGGAAGTATAA+TGG | + | chr3_4:8993671-8993690 | Msa0488850:CDS | 20.0% |
| ! | ATTATCTTCGGTTATGATAT+AGG | + | chr3_4:8991036-8991055 | Msa0488850:CDS | 25.0% |
| ! | GAAAAGATAATGAAGTTGAA+TGG | - | chr3_4:8991082-8991101 | None:intergenic | 25.0% |
| ! | AAGATTGTTATCGCAAAAAA+TGG | - | chr3_4:8991429-8991448 | None:intergenic | 25.0% |
| ! | AAAATAGATGATATGGTATG+AGG | + | chr3_4:8991613-8991632 | Msa0488850:intron | 25.0% |
| ! | AAATAGATGATATGGTATGA+GGG | + | chr3_4:8991614-8991633 | Msa0488850:intron | 25.0% |
| !! | CATGTAATTTCAACGAATTT+TGG | - | chr3_4:8991644-8991663 | None:intergenic | 25.0% |
| ! | CAAAATTCGTTGAAATTACA+TGG | + | chr3_4:8991642-8991661 | Msa0488850:intron | 25.0% |
| ! | AAATTCGTTGAAATTACATG+GGG | + | chr3_4:8991644-8991663 | Msa0488850:intron | 25.0% |
| ! | TATCCCATGTAAAAAAACTT+TGG | - | chr3_4:8991747-8991766 | None:intergenic | 25.0% |
| ! | TAAATCAAAATTTGCCCAAA+TGG | + | chr3_4:8991765-8991784 | Msa0488850:intron | 25.0% |
| !!! | CAATTTTTTTCTCTTTTTGC+AGG | + | chr3_4:8991910-8991929 | Msa0488850:intron | 25.0% |
| ! | CAATCTCTTAAAATTTGTGT+CGG | + | chr3_4:8992569-8992588 | Msa0488850:intron | 25.0% |
| !! | TCACTTATAAACTCATTTTC+AGG | + | chr3_4:8992847-8992866 | Msa0488850:intron | 25.0% |
| ! | GATGATCAAAAGTTCAAAAT+TGG | - | chr3_4:8992884-8992903 | None:intergenic | 25.0% |
| ! | TATTAAGCTCTTTAATTCGT+TGG | + | chr3_4:8992946-8992965 | Msa0488850:intron | 25.0% |
| !!! | AAAAGTTTATTTTCTTCTGC+AGG | + | chr3_4:8993017-8993036 | Msa0488850:intron | 25.0% |
| ! | CCATTTCTGATAGATATAAT+GGG | - | chr3_4:8993047-8993066 | None:intergenic | 25.0% |
| ! | TCAGCAAATTTAATCAACTT+TGG | + | chr3_4:8993132-8993151 | Msa0488850:CDS | 25.0% |
| ! | CTTTGTAAGATGTTCTTAAA+TGG | - | chr3_4:8993399-8993418 | None:intergenic | 25.0% |
| ! | CTAATCCAATGGTTAAAAAT+AGG | - | chr3_4:8993512-8993531 | None:intergenic | 25.0% |
| !!! | CTATTTTTAACCATTGGATT+AGG | + | chr3_4:8993510-8993529 | Msa0488850:CDS | 25.0% |
| ! | TTCTTCTCACAAATTCTAAT+AGG | + | chr3_4:8993660-8993679 | Msa0488850:CDS | 25.0% |
| !! | ATGTTATGTCATTTCAAGTA+TGG | + | chr3_4:8993915-8993934 | Msa0488850:CDS | 25.0% |
| !!! | TATGGAACTTTCTTCTTTTT+TGG | + | chr3_4:8993933-8993952 | Msa0488850:CDS | 25.0% |
| !!! | TTTGGAGAGAACATTTTTTT+TGG | + | chr3_4:8994039-8994058 | Msa0488850:CDS | 25.0% |
| ATACAAGAGAGAATCACAAT+AGG | - | chr3_4:8990997-8991016 | None:intergenic | 30.0% | |
| TATTGTGATTCTCTCTTGTA+TGG | + | chr3_4:8990996-8991015 | Msa0488850:CDS | 30.0% | |
| GGTTATGATATAGGAATTTC+AGG | + | chr3_4:8991045-8991064 | Msa0488850:CDS | 30.0% | |
| !!! | TTTTTTTCTCTTTTTGCAGG+TGG | + | chr3_4:8991913-8991932 | Msa0488850:intron | 30.0% |
| GGAAAAAACTTCTCCAAAAA+TGG | - | chr3_4:8991955-8991974 | None:intergenic | 30.0% | |
| ACTTCATCACTATATATAGC+TGG | + | chr3_4:8992054-8992073 | Msa0488850:CDS | 30.0% | |
| AAGCAAAGAAAGATGCTAAA+AGG | - | chr3_4:8992080-8992099 | None:intergenic | 30.0% | |
| TAGGACAAAACTGATCTATT+AGG | + | chr3_4:8992422-8992441 | Msa0488850:intron | 30.0% | |
| ! | TGGATTGGATACTATTATCT+TGG | + | chr3_4:8992966-8992985 | Msa0488850:intron | 30.0% |
| CCCATTATATCTATCAGAAA+TGG | + | chr3_4:8993044-8993063 | Msa0488850:CDS | 30.0% | |
| GCCATTTCTGATAGATATAA+TGG | - | chr3_4:8993048-8993067 | None:intergenic | 30.0% | |
| AGAAAAGATCAAAGACGATT+GGG | + | chr3_4:8993158-8993177 | Msa0488850:CDS | 30.0% | |
| !!! | TTTGATGGTTTTTGCTGTTT+TGG | - | chr3_4:8993275-8993294 | None:intergenic | 30.0% |
| !! | GCATTAACTTAGCTTTTTGA+TGG | - | chr3_4:8993290-8993309 | None:intergenic | 30.0% |
| TGATGTTCAACAAGAATTTG+AGG | + | chr3_4:8993332-8993351 | Msa0488850:CDS | 30.0% | |
| ACATGATACTTGCTTCAATA+AGG | - | chr3_4:8993359-8993378 | None:intergenic | 30.0% | |
| !! | ATATAGACCTCAACTTGTTA+TGG | + | chr3_4:8993422-8993441 | Msa0488850:CDS | 30.0% |
| AAATAGGATTGGAGCATAAA+AGG | - | chr3_4:8993496-8993515 | None:intergenic | 30.0% | |
| CCAATGGTTAAAAATAGGAT+TGG | - | chr3_4:8993507-8993526 | None:intergenic | 30.0% | |
| !!! | CCAATCCTATTTTTAACCAT+TGG | + | chr3_4:8993504-8993523 | Msa0488850:CDS | 30.0% |
| !! | TTCACTTTTATCTGCAGTTA+TGG | + | chr3_4:8993542-8993561 | Msa0488850:CDS | 30.0% |
| ! | TTTTATCTGCAGTTATGGTA+GGG | + | chr3_4:8993547-8993566 | Msa0488850:CDS | 30.0% |
| ATGCTTATAGTCGATAAACT+AGG | + | chr3_4:8993600-8993619 | Msa0488850:CDS | 30.0% | |
| TTGATATGCATTTATGTTGC+CGG | + | chr3_4:8993753-8993772 | Msa0488850:CDS | 30.0% | |
| !!! | TTTCTTCTTTTTTGGAGGTT+GGG | + | chr3_4:8993941-8993960 | Msa0488850:CDS | 30.0% |
| GTCTTTACATCACTGTCATT+TGG | + | chr3_4:8991493-8991512 | Msa0488850:intron | 35.0% | |
| AAAATTTGCCCAAATGGCAT+AGG | + | chr3_4:8991771-8991790 | Msa0488850:intron | 35.0% | |
| AAATTTGCCCAAATGGCATA+GGG | + | chr3_4:8991772-8991791 | Msa0488850:intron | 35.0% | |
| !!! | AACATCAATGGTGCCATTTT+TGG | + | chr3_4:8991939-8991958 | Msa0488850:CDS | 35.0% |
| ! | TTCATCTTGGTGTATACATC+TGG | - | chr3_4:8991976-8991995 | None:intergenic | 35.0% |
| !! | CTTGTTGTCTTGTTTCATCT+TGG | - | chr3_4:8991989-8992008 | None:intergenic | 35.0% |
| AAGTGAATGTTGTTAGGAGT+TGG | - | chr3_4:8992038-8992057 | None:intergenic | 35.0% | |
| GTGATGAAGTGAATGTTGTT+AGG | - | chr3_4:8992044-8992063 | None:intergenic | 35.0% | |
| AAACCATCAATTCTTGTAGG+TGG | + | chr3_4:8992126-8992145 | Msa0488850:CDS | 35.0% | |
| TATTAGGTCGAAGAGTTTCA+AGG | + | chr3_4:8992438-8992457 | Msa0488850:intron | 35.0% | |
| !! | CATGTGAAACTGACTTGTAT+AGG | + | chr3_4:8992604-8992623 | Msa0488850:intron | 35.0% |
| !! | AAACTGACTTGTATAGGTGA+GGG | + | chr3_4:8992610-8992629 | Msa0488850:intron | 35.0% |
| !!! | TCTCACAAGTCGGTTTTTTA+TGG | - | chr3_4:8992814-8992833 | None:intergenic | 35.0% |
| GTCAGTGCAAAACATGTTTA+TGG | + | chr3_4:8992909-8992928 | Msa0488850:intron | 35.0% | |
| AGCTCTTTAATTCGTTGGAT+TGG | + | chr3_4:8992951-8992970 | Msa0488850:intron | 35.0% | |
| TTGATTGCTCCTCTATATCT+TGG | - | chr3_4:8993075-8993094 | None:intergenic | 35.0% | |
| TATAGAGGAGCAATCAACAA+TGG | + | chr3_4:8993078-8993097 | Msa0488850:CDS | 35.0% | |
| TTCCAACTATGTGTTGGAAT+TGG | + | chr3_4:8993102-8993121 | Msa0488850:CDS | 35.0% | |
| CAGAAAAGATCAAAGACGAT+TGG | + | chr3_4:8993157-8993176 | Msa0488850:CDS | 35.0% | |
| GAAAAGATCAAAGACGATTG+GGG | + | chr3_4:8993159-8993178 | Msa0488850:CDS | 35.0% | |
| !! | TTATGCTGTTTGGTGTTTCT+GGG | - | chr3_4:8993251-8993270 | None:intergenic | 35.0% |
| !! | ATTATGCTGTTTGGTGTTTC+TGG | - | chr3_4:8993252-8993271 | None:intergenic | 35.0% |
| !! | CTGTTTTGGATTATGCTGTT+TGG | - | chr3_4:8993261-8993280 | None:intergenic | 35.0% |
| TTAATGCTGCAATCCATAAG+AGG | + | chr3_4:8993303-8993322 | Msa0488850:CDS | 35.0% | |
| AACATCATGTGTACCTCTTA+TGG | - | chr3_4:8993319-8993338 | None:intergenic | 35.0% | |
| CCTGTGAATTGTTGGAAAAA+AGG | - | chr3_4:8993459-8993478 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTCCAACAATTCAC+AGG | + | chr3_4:8993456-8993475 | Msa0488850:CDS | 35.0% |
| !! | CATTGATTCCTGTGAATTGT+TGG | - | chr3_4:8993467-8993486 | None:intergenic | 35.0% |
| ! | CTTTTATCTGCAGTTATGGT+AGG | + | chr3_4:8993546-8993565 | Msa0488850:CDS | 35.0% |
| !!! | CGAAGAGTTTTGTTCATATC+AGG | + | chr3_4:8993624-8993643 | Msa0488850:CDS | 35.0% |
| !!! | AGAGTTTTGTTCATATCAGG+TGG | + | chr3_4:8993627-8993646 | Msa0488850:CDS | 35.0% |
| ! | TCCTAGTGAGATTTTTCCAT+TGG | + | chr3_4:8993812-8993831 | Msa0488850:CDS | 35.0% |
| TCCAATGGAAAAATCTCACT+AGG | - | chr3_4:8993816-8993835 | None:intergenic | 35.0% | |
| !!! | GGAACTTTCTTCTTTTTTGG+AGG | + | chr3_4:8993936-8993955 | Msa0488850:CDS | 35.0% |
| !!! | CTTTCTTCTTTTTTGGAGGT+TGG | + | chr3_4:8993940-8993959 | Msa0488850:CDS | 35.0% |
| ATTGGAACATTCTTGGTTTC+TGG | - | chr3_4:8994002-8994021 | None:intergenic | 35.0% | |
| TTGCTCAATTGGAACATTCT+TGG | - | chr3_4:8994009-8994028 | None:intergenic | 35.0% | |
| GAATGTTCCAATTGAGCAAA+TGG | + | chr3_4:8994010-8994029 | Msa0488850:CDS | 35.0% | |
| TTCCAATTGAGCAAATGGAT+AGG | + | chr3_4:8994015-8994034 | Msa0488850:CDS | 35.0% | |
| TCCAATTGAGCAAATGGATA+GGG | + | chr3_4:8994016-8994035 | Msa0488850:CDS | 35.0% | |
| ATTGTTGGAGACAAGATTGA+AGG | + | chr3_4:8994068-8994087 | Msa0488850:CDS | 35.0% | |
| AGCAATGGAAGAGGATACAA+TGG | + | chr3_4:8990961-8990980 | Msa0488850:CDS | 40.0% | |
| TGTGATTCTCTCTTGTATGG+TGG | + | chr3_4:8990999-8991018 | Msa0488850:CDS | 40.0% | |
| ! | GTGTTTACCCTATGCCATTT+GGG | - | chr3_4:8991782-8991801 | None:intergenic | 40.0% |
| TCATCAATCACAAGAGCCTT+TGG | + | chr3_4:8992099-8992118 | Msa0488850:CDS | 40.0% | |
| ! | AATTGATGGTTTGCGACCAA+AGG | - | chr3_4:8992118-8992137 | None:intergenic | 40.0% |
| CGCAAACCATCAATTCTTGT+AGG | + | chr3_4:8992123-8992142 | Msa0488850:CDS | 40.0% | |
| ATACTTGGTCGTGTTCTTCT+TGG | + | chr3_4:8992207-8992226 | Msa0488850:CDS | 40.0% | |
| GTTCTTCTTGGAGTTGGAAT+TGG | + | chr3_4:8992219-8992238 | Msa0488850:CDS | 40.0% | |
| !! | TGGAATTGGCTTTGCTAATC+AGG | + | chr3_4:8992233-8992252 | Msa0488850:CDS | 40.0% |
| ! | GAGAGATAATGGCACTCTTT+AGG | + | chr3_4:8992324-8992343 | Msa0488850:intron | 40.0% |
| !! | GAAACTGACTTGTATAGGTG+AGG | + | chr3_4:8992609-8992628 | Msa0488850:intron | 40.0% |
| GTCACACTAGACATATGTCT+GGG | - | chr3_4:8992703-8992722 | None:intergenic | 40.0% | |
| !! | AAAAACCGACTTGTGAGAAG+AGG | + | chr3_4:8992816-8992835 | Msa0488850:intron | 40.0% |
| ACATTCCTCTTCTCACAAGT+CGG | - | chr3_4:8992824-8992843 | None:intergenic | 40.0% | |
| ATGGCACTTCCAAGATATAG+AGG | + | chr3_4:8993063-8993082 | Msa0488850:CDS | 40.0% | |
| AATGGCTTCCAACTATGTGT+TGG | + | chr3_4:8993096-8993115 | Msa0488850:CDS | 40.0% | |
| CACCAATTCCAACACATAGT+TGG | - | chr3_4:8993107-8993126 | None:intergenic | 40.0% | |
| CCTAAAGTGAGGATTAAAGC+TGG | - | chr3_4:8993216-8993235 | None:intergenic | 40.0% | |
| ! | CCAGCTTTAATCCTCACTTT+AGG | + | chr3_4:8993213-8993232 | Msa0488850:CDS | 40.0% |
| GACAAAATGCTCCTAAAGTG+AGG | - | chr3_4:8993227-8993246 | None:intergenic | 40.0% | |
| GCTATTGCCATAACAAGTTG+AGG | - | chr3_4:8993432-8993451 | None:intergenic | 40.0% | |
| AGCACTTTCACCTAATCCAA+TGG | - | chr3_4:8993523-8993542 | None:intergenic | 40.0% | |
| AGTATAATGGCAGCACAACT+TGG | + | chr3_4:8993684-8993703 | Msa0488850:CDS | 40.0% | |
| ! | TTTATGTTGCCGGATTTGCT+TGG | + | chr3_4:8993763-8993782 | Msa0488850:CDS | 40.0% |
| TGCAACTGTAATACTTTGCG+CGG | - | chr3_4:8993850-8993869 | None:intergenic | 40.0% | |
| ACCCTATCCATTTGCTCAAT+TGG | - | chr3_4:8994020-8994039 | None:intergenic | 40.0% | |
| TTGAGCAAATGGATAGGGTT+TGG | + | chr3_4:8994021-8994040 | Msa0488850:CDS | 40.0% | |
| GAGCTACCAATTGCAAGCAA+TGG | + | chr3_4:8990946-8990965 | Msa0488850:CDS | 45.0% | |
| CCTCTTCCATTGCTTGCAAT+TGG | - | chr3_4:8990955-8990974 | None:intergenic | 45.0% | |
| CCAATTGCAAGCAATGGAAG+AGG | + | chr3_4:8990952-8990971 | Msa0488850:CDS | 45.0% | |
| AGATACGAGTAGCGTACAAG+TGG | + | chr3_4:8991392-8991411 | Msa0488850:intron | 45.0% | |
| CGTGTTTACCCTATGCCATT+TGG | - | chr3_4:8991783-8991802 | None:intergenic | 45.0% | |
| TGCAGGTGGTGTAACATCAA+TGG | + | chr3_4:8991927-8991946 | Msa0488850:intron | 45.0% | |
| GCACCACCTACAAGAATTGA+TGG | - | chr3_4:8992132-8992151 | None:intergenic | 45.0% | |
| TTCCTTATTGGAGCAGCTCT+TGG | + | chr3_4:8992156-8992175 | Msa0488850:CDS | 45.0% | |
| CGTCACACTAGACATATGTC+TGG | - | chr3_4:8992704-8992723 | None:intergenic | 45.0% | |
| TATGTCTAGTGTGACGTGAG+TGG | + | chr3_4:8992708-8992727 | Msa0488850:intron | 45.0% | |
| AGATCAAAGACGATTGGGGA+TGG | + | chr3_4:8993163-8993182 | Msa0488850:CDS | 45.0% | |
| ATGGCGAATTTCTCTAGCCA+TGG | + | chr3_4:8993182-8993201 | Msa0488850:CDS | 45.0% | |
| GCAGTTATGGTAGGGATTGT+AGG | + | chr3_4:8993555-8993574 | Msa0488850:CDS | 45.0% | |
| CTAGGAACCAACCATCCTAA+TGG | - | chr3_4:8993798-8993817 | None:intergenic | 45.0% | |
| !!! | CTTCTTTTTTGGAGGTTGGG+TGG | + | chr3_4:8993944-8993963 | Msa0488850:CDS | 45.0% |
| GATTGAAGGCAAACACACTG+TGG | + | chr3_4:8994082-8994101 | Msa0488850:CDS | 45.0% | |
| !! | GCCACTGGAGGCATTATCTT+CGG | + | chr3_4:8991024-8991043 | Msa0488850:CDS | 50.0% |
| ACCGAAGATAATGCCTCCAG+TGG | - | chr3_4:8991028-8991047 | None:intergenic | 50.0% | |
| !! | GGTGGTGCTGCATTCCTTAT+TGG | + | chr3_4:8992144-8992163 | Msa0488850:CDS | 50.0% |
| CACCAAGAGCTGCTCCAATA+AGG | - | chr3_4:8992161-8992180 | None:intergenic | 50.0% | |
| CTTATTGGAGCAGCTCTTGG+TGG | + | chr3_4:8992159-8992178 | Msa0488850:CDS | 50.0% | |
| GGTCGTGTTCTTCTTGGAGT+TGG | + | chr3_4:8992213-8992232 | Msa0488850:CDS | 50.0% | |
| TGCCTTTATGACACGCTGCT+AGG | + | chr3_4:8992403-8992422 | Msa0488850:intron | 50.0% | |
| GTCCTAGCAGCGTGTCATAA+AGG | - | chr3_4:8992408-8992427 | None:intergenic | 50.0% | |
| ACATATGTCTGGGCGTGAAG+GGG | - | chr3_4:8992693-8992712 | None:intergenic | 50.0% | |
| GACATATGTCTGGGCGTGAA+GGG | - | chr3_4:8992694-8992713 | None:intergenic | 50.0% | |
| AGACATATGTCTGGGCGTGA+AGG | - | chr3_4:8992695-8992714 | None:intergenic | 50.0% | |
| TAAAGCTGGAACTGCTGCCA+TGG | - | chr3_4:8993202-8993221 | None:intergenic | 50.0% | |
| ! | GCAGCACAACTTGGTGATCA+TGG | + | chr3_4:8993693-8993712 | Msa0488850:CDS | 50.0% |
| ! | TTGCCGGATTTGCTTGGTCA+TGG | + | chr3_4:8993769-8993788 | Msa0488850:CDS | 50.0% |
| ! | TGCCGGATTTGCTTGGTCAT+GGG | + | chr3_4:8993770-8993789 | Msa0488850:CDS | 50.0% |
| GCGGCTGATCTAATCTCCAA+TGG | - | chr3_4:8993831-8993850 | None:intergenic | 50.0% | |
| TCTTGTATGGTGGCTGCCAC+TGG | + | chr3_4:8991009-8991028 | Msa0488850:CDS | 55.0% | |
| CCGAAATCCGTTGAGCTACC+CGG | - | chr3_4:8992746-8992765 | None:intergenic | 55.0% | |
| ! | CCGGGTAGCTCAACGGATTT+CGG | + | chr3_4:8992743-8992762 | Msa0488850:intron | 55.0% |
| ! | GCCGGATTTGCTTGGTCATG+GGG | + | chr3_4:8993771-8993790 | Msa0488850:CDS | 55.0% |
| CCCCCATGACCAAGCAAATC+CGG | - | chr3_4:8993775-8993794 | None:intergenic | 55.0% | |
| ! | CCGGATTTGCTTGGTCATGG+GGG | + | chr3_4:8993772-8993791 | Msa0488850:CDS | 55.0% |
| ATGGGGGCCATTAGGATGGT+TGG | + | chr3_4:8993788-8993807 | Msa0488850:CDS | 55.0% | |
| TGTATGGTGGCTGCCACTGG+AGG | + | chr3_4:8991012-8991031 | Msa0488850:CDS | 60.0% | |
| TGACGTGAGTGGCCCGATAG+CGG | + | chr3_4:8992719-8992738 | Msa0488850:intron | 60.0% | |
| GCTTGGTCATGGGGGCCATT+AGG | + | chr3_4:8993780-8993799 | Msa0488850:CDS | 60.0% | |
| GGTCATGGGGGCCATTAGGA+TGG | + | chr3_4:8993784-8993803 | Msa0488850:CDS | 60.0% | |
| GACGTGAGTGGCCCGATAGC+GGG | + | chr3_4:8992720-8992739 | Msa0488850:intron | 65.0% | |
| TGAGCTACCCGGCCCGCTAT+CGG | - | chr3_4:8992735-8992754 | None:intergenic | 65.0% | |
| ! | TAGCGGGCCGGGTAGCTCAA+CGG | + | chr3_4:8992736-8992755 | Msa0488850:intron | 65.0% |
| !! | TGAGTGGCCCGATAGCGGGC+CGG | + | chr3_4:8992724-8992743 | Msa0488850:intron | 70.0% |
| GAGCTACCCGGCCCGCTATC+GGG | - | chr3_4:8992734-8992753 | None:intergenic | 70.0% | |
| !! | GAGTGGCCCGATAGCGGGCC+GGG | + | chr3_4:8992725-8992744 | Msa0488850:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 8990934 | 8994112 | 8990934 | ID=Msa0488850;Name=Msa0488850 |
| chr3_4 | mRNA | 8990934 | 8994112 | 8990934 | ID=Msa0488850-mRNA-1;Parent=Msa0488850;Name=Msa0488850-mRNA-1;_AED=0.57;_eAED=0.57;_QI=0|0|0|0.33|1|1|3|0|509 |
| chr3_4 | exon | 8990934 | 8991066 | 8990934 | ID=Msa0488850-mRNA-1:exon:2962;Parent=Msa0488850-mRNA-1 |
| chr3_4 | exon | 8991932 | 8992254 | 8991932 | ID=Msa0488850-mRNA-1:exon:2963;Parent=Msa0488850-mRNA-1 |
| chr3_4 | exon | 8993039 | 8994112 | 8993039 | ID=Msa0488850-mRNA-1:exon:2964;Parent=Msa0488850-mRNA-1 |
| chr3_4 | CDS | 8990934 | 8991066 | 8990934 | ID=Msa0488850-mRNA-1:cds;Parent=Msa0488850-mRNA-1 |
| chr3_4 | CDS | 8991932 | 8992254 | 8991932 | ID=Msa0488850-mRNA-1:cds;Parent=Msa0488850-mRNA-1 |
| chr3_4 | CDS | 8993039 | 8994112 | 8993039 | ID=Msa0488850-mRNA-1:cds;Parent=Msa0488850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
