AlfalfaGEDB | Msa0876690

M. sativa cultivar zhongmu-4 / Msa0876690

KEGG: -
GO: -
PFAM: PF00657.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0876690	XP_003618755.1	95.902	366	15	0	1	366	1	366	0.0	725

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0876690	sp\|Q8LB81\|GDL79_ARATH	69.679	343	103	1	24	366	25	366	0.0	513

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0876690	G7KMT3	95.902	366	15	0	1	366	1	366	0.0	725

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0018220	Msa0876690	0.818845	1.584771e-52	-8.615850e-47
Msa0052460	Msa0876690	0.840674	7.543757e-58	-8.615850e-47
Msa0097050	Msa0876690	0.821575	3.754052e-53	-8.615850e-47
Msa0641620	Msa0876690	0.803057	4.181009e-49	-8.615850e-47
Msa0669840	Msa0876690	0.806515	7.925650e-50	-8.615850e-47
Msa0680150	Msa0876690	0.808326	3.272860e-50	-8.615850e-47
Msa0691160	Msa0876690	0.834295	3.256081e-56	-8.615850e-47
Msa0707220	Msa0876690	0.815434	9.262696e-52	-8.615850e-47
Msa0723150	Msa0876690	0.800795	1.218582e-48	-8.615850e-47
Msa0802840	Msa0876690	0.807082	6.012487e-50	-8.615850e-47
Msa0161100	Msa0876690	0.818406	1.992868e-52	-8.615850e-47
Msa0181090	Msa0876690	0.804725	1.881889e-49	-8.615850e-47
Msa0203020	Msa0876690	0.807127	5.882390e-50	-8.615850e-47
Msa0203030	Msa0876690	0.811675	6.216401e-51	-8.615850e-47
Msa0219190	Msa0876690	0.806058	9.888315e-50	-8.615850e-47
Msa0413930	Msa0876690	0.813993	1.931650e-51	-8.615850e-47
Msa0451400	Msa0876690	0.802482	5.493234e-49	-8.615850e-47
Msa0259720	Msa0876690	0.812151	4.898074e-51	-8.615850e-47
Msa0260970	Msa0876690	0.806982	6.312991e-50	-8.615850e-47
Msa0305500	Msa0876690	0.801959	7.038210e-49	-8.615850e-47
Msa0322840	Msa0876690	0.806124	9.579809e-50	-8.615850e-47
Msa0331900	Msa0876690	0.823436	1.386571e-53	-8.615850e-47
Msa0359250	Msa0876690	0.807537	4.816393e-50	-8.615850e-47
Msa0601110	Msa0876690	0.804660	1.941940e-49	-8.615850e-47
Msa0867350	Msa0876690	0.810090	1.370370e-50	-8.615850e-47
Msa0873190	Msa0876690	0.825658	4.158115e-54	-8.615850e-47
Msa0876690	Msa0929870	0.816232	6.150107e-52	-8.615850e-47
Msa0876690	Msa0941960	0.964094	6.775177e-123	-8.615850e-47
Msa0876690	Msa0951960	0.806909	6.543063e-50	-8.615850e-47
Msa0876690	Msa0975580	0.800613	1.327508e-48	-8.615850e-47
Msa0876690	Msa0979030	0.838705	2.452974e-57	-8.615850e-47
Msa0876690	Msa1145020	0.804245	2.370160e-49	-8.615850e-47
Msa0876690	Msa1173710	0.810552	1.089027e-50	-8.615850e-47
Msa0876690	Msa1348400	0.934563	3.325400e-96	-8.615850e-47
Msa0876690	Msa1420060	0.827793	1.285914e-54	-8.615850e-47
Msa0876690	Msa1421550	0.808505	2.996427e-50	-8.615850e-47
Msa0876690	Msa1435670	0.803299	3.724759e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0876690	MtrunA17_Chr6g0457921	95.902	366	15	0	1	366	1	366	0.0	725
Msa0876690	MtrunA17_Chr7g0275021	72.237	371	97	2	1	366	1	370	0.0	556
Msa0876690	MtrunA17_Chr7g0275011	75.942	345	81	2	20	364	26	368	0.0	545
Msa0876690	MtrunA17_Chr7g0275001	69.315	365	105	3	3	366	4	362	0.0	520
Msa0876690	MtrunA17_Chr1g0189931	67.967	359	113	2	6	363	8	365	0.0	513
Msa0876690	MtrunA17_Chr7g0274991	69.388	343	104	1	24	366	28	369	0.0	508
Msa0876690	MtrunA17_Chr7g0215961	66.577	371	104	4	1	366	1	356	0.0	505
Msa0876690	MtrunA17_Chr4g0008851	66.758	364	114	4	5	366	12	370	9.20e-179	500
Msa0876690	MtrunA17_Chr1g0189901	69.139	337	103	1	28	364	30	365	3.74e-178	499
Msa0876690	MtrunA17_Chr1g0182811	61.064	357	136	3	10	364	14	369	2.64e-168	474
Msa0876690	MtrunA17_Chr1g0189891	63.889	360	119	6	8	364	7	358	4.42e-163	460
Msa0876690	MtrunA17_Chr5g0434621	40.952	315	181	5	32	345	28	338	1.15e-76	240
Msa0876690	MtrunA17_Chr8g0374101	39.528	339	197	7	31	362	39	376	5.26e-76	239
Msa0876690	MtrunA17_Chr5g0438621	38.535	314	186	6	31	341	32	341	2.20e-72	229
Msa0876690	MtrunA17_Chr3g0131321	38.138	333	194	5	31	356	36	363	4.28e-72	229
Msa0876690	MtrunA17_Chr3g0120861	38.199	322	192	6	31	349	40	357	5.38e-72	228
Msa0876690	MtrunA17_Chr4g0068441	38.298	329	197	4	31	356	37	362	1.22e-70	225
Msa0876690	MtrunA17_Chr8g0380041	36.986	365	213	9	6	362	8	363	2.48e-70	224
Msa0876690	MtrunA17_Chr3g0077571	35.933	359	221	7	4	362	8	357	2.59e-70	224
Msa0876690	MtrunA17_Chr3g0086641	38.395	349	197	8	8	350	15	351	3.70e-70	224
Msa0876690	MtrunA17_Chr5g0432101	38.608	316	185	6	29	339	33	344	1.19e-69	222
Msa0876690	MtrunA17_Chr5g0438631	38.730	315	185	6	31	341	30	340	4.72e-69	220
Msa0876690	MtrunA17_Chr4g0017431	33.607	366	236	4	1	362	1	363	9.76e-69	220
Msa0876690	MtrunA17_Chr5g0438641	34.582	347	218	7	2	344	5	346	3.20e-67	216
Msa0876690	MtrunA17_Chr3g0105401	37.580	314	190	6	31	341	30	340	4.16e-67	215
Msa0876690	MtrunA17_Chr2g0294301	35.556	360	224	5	4	360	12	366	2.10e-66	214
Msa0876690	MtrunA17_Chr2g0285061	35.838	346	212	6	22	362	25	365	6.71e-65	210
Msa0876690	MtrunA17_Chr2g0330781	36.991	319	193	7	30	344	32	346	2.32e-64	208
Msa0876690	MtrunA17_Chr3g0092131	36.070	341	208	7	8	344	3	337	4.03e-64	208
Msa0876690	MtrunA17_Chr3g0099161	36.240	367	210	10	7	362	73	426	4.57e-64	210
Msa0876690	MtrunA17_Chr5g0405831	36.000	325	201	6	24	345	39	359	6.00e-64	207
Msa0876690	MtrunA17_Chr5g0444401	34.511	368	222	8	2	361	5	361	1.32e-63	207
Msa0876690	MtrunA17_Chr2g0294311	36.261	353	200	9	24	360	28	371	4.05e-63	206
Msa0876690	MtrunA17_Chr1g0156891	36.080	352	213	7	1	344	10	357	4.41e-63	205
Msa0876690	MtrunA17_Chr8g0371491	37.618	319	183	10	24	335	32	341	4.87e-63	205
Msa0876690	MtrunA17_Chr5g0405821	35.072	345	211	8	4	339	14	354	7.33e-62	202
Msa0876690	MtrunA17_Chr3g0085881	36.257	342	200	8	21	360	26	351	2.47e-61	201
Msa0876690	MtrunA17_Chr8g0341001	33.807	352	220	8	1	344	1	347	4.60e-61	200
Msa0876690	MtrunA17_Chr4g0046151	34.615	364	213	9	3	346	8	366	2.04e-60	198
Msa0876690	MtrunA17_Chr5g0396511	34.036	332	215	4	31	360	48	377	2.23e-60	199
Msa0876690	MtrunA17_Chr1g0156921	34.835	333	202	8	25	352	39	361	4.31e-60	197
Msa0876690	MtrunA17_Chr2g0320671	34.000	350	219	9	1	344	1	344	4.90e-60	197
Msa0876690	MtrunA17_Chr3g0099151	33.787	367	224	8	6	362	65	422	5.06e-60	199
Msa0876690	MtrunA17_Chr4g0060811	37.107	318	191	6	31	344	29	341	2.53e-59	196
Msa0876690	MtrunA17_Chr1g0156931	34.278	353	215	9	1	344	9	353	3.70e-59	195
Msa0876690	MtrunA17_Chr8g0371481	35.514	321	195	10	31	345	43	357	5.23e-58	192
Msa0876690	MtrunA17_Chr3g0077581	35.207	338	210	7	30	362	37	370	5.91e-58	192
Msa0876690	MtrunA17_Chr1g0156911	35.897	312	194	5	31	340	39	346	7.46e-58	191
Msa0876690	MtrunA17_Chr1g0156901	35.211	355	208	9	5	344	16	363	3.91e-57	190
Msa0876690	MtrunA17_Chr3g0099231	32.410	361	226	8	7	360	10	359	1.06e-56	189
Msa0876690	MtrunA17_Chr8g0371471	34.268	321	198	11	31	345	43	356	2.62e-56	187
Msa0876690	MtrunA17_Chr8g0380031	33.433	335	208	6	30	362	85	406	4.47e-56	188
Msa0876690	MtrunA17_Chr2g0284951	34.783	345	207	8	19	360	24	353	1.48e-55	186
Msa0876690	MtrunA17_Chr2g0283191	32.958	355	204	10	4	335	9	352	4.95e-55	184
Msa0876690	MtrunA17_Chr4g0027521	33.046	348	220	8	5	345	4	345	1.08e-54	183
Msa0876690	MtrunA17_Chr1g0189911	56.164	146	63	1	219	363	2	147	6.60e-54	174
Msa0876690	MtrunA17_Chr2g0301641	32.884	371	230	8	4	363	16	378	6.66e-54	182
Msa0876690	MtrunA17_Chr3g0142941	33.542	319	202	6	30	344	48	360	8.13e-54	181
Msa0876690	MtrunA17_Chr2g0284921	34.049	326	200	7	30	353	35	347	4.17e-53	179
Msa0876690	MtrunA17_Chr3g0142921	34.579	321	202	7	27	344	35	350	5.92e-53	179
Msa0876690	MtrunA17_Chr8g0370951	34.985	343	199	13	32	360	34	366	9.40e-53	179
Msa0876690	MtrunA17_Chr2g0285001	34.897	341	197	8	30	360	34	359	2.69e-52	177
Msa0876690	MtrunA17_Chr2g0284991	33.531	337	198	8	13	336	9	332	2.45e-50	172
Msa0876690	MtrunA17_Chr5g0437421	30.793	328	206	8	26	341	30	348	8.08e-49	168
Msa0876690	MtrunA17_Chr1g0157001	32.628	331	212	5	34	360	41	364	1.40e-48	168
Msa0876690	MtrunA17_Chr1g0189921	68.504	127	35	4	1	124	1	125	4.78e-48	159
Msa0876690	MtrunA17_Chr8g0344941	33.131	329	198	8	28	345	40	357	9.15e-48	166
Msa0876690	MtrunA17_Chr8g0349341	31.287	342	206	10	31	360	39	363	1.77e-46	162
Msa0876690	MtrunA17_Chr5g0420811	33.441	311	187	9	32	338	36	330	7.97e-46	160
Msa0876690	MtrunA17_Chr8g0344931	30.769	338	217	7	29	362	37	361	6.26e-45	158
Msa0876690	MtrunA17_Chr8g0370981	30.049	406	223	10	7	361	23	418	1.08e-44	159
Msa0876690	MtrunA17_Chr8g0349321	30.205	341	211	8	31	360	39	363	4.76e-44	155
Msa0876690	MtrunA17_Chr7g0228261	71.277	94	27	0	271	364	1	94	2.61e-43	145
Msa0876690	MtrunA17_Chr3g0085231	30.931	333	208	8	32	360	34	348	1.29e-42	151
Msa0876690	MtrunA17_Chr2g0284941	30.411	365	214	10	4	360	5	337	8.01e-42	149
Msa0876690	MtrunA17_Chr8g0349331	29.912	341	182	9	31	360	37	331	5.88e-38	139
Msa0876690	MtrunA17_Chr8g0349301	32.042	284	174	7	31	310	39	307	1.42e-37	137
Msa0876690	MtrunA17_Chr8g0370961	29.536	237	155	4	127	359	14	242	4.07e-36	131
Msa0876690	MtrunA17_Chr2g0283481	29.759	373	227	14	10	359	28	388	5.29e-33	127
Msa0876690	MtrunA17_Chr1g0159971	29.248	359	208	13	24	353	42	383	1.24e-31	123
Msa0876690	MtrunA17_Chr1g0160031	29.706	340	199	11	33	346	43	368	3.45e-31	121
Msa0876690	MtrunA17_Chr8g0381581	27.746	346	203	12	33	346	44	374	3.42e-30	119
Msa0876690	MtrunA17_Chr1g0160011	28.496	379	225	14	3	353	14	374	6.24e-30	118
Msa0876690	MtrunA17_Chr4g0027571	29.412	221	152	3	133	351	3	221	1.82e-29	113
Msa0876690	MtrunA17_Chr7g0271551	29.971	347	209	13	22	353	29	356	3.79e-29	115
Msa0876690	MtrunA17_Chr7g0254461	26.857	350	204	11	33	347	47	379	3.08e-27	111
Msa0876690	MtrunA17_Chr6g0455661	25.943	212	155	2	151	362	263	472	6.00e-27	111
Msa0876690	MtrunA17_Chr6g0455661	52.222	90	39	2	32	121	34	119	2.13e-18	86.3
Msa0876690	MtrunA17_Chr1g0160101	28.814	354	199	14	33	353	46	379	6.68e-27	110
Msa0876690	MtrunA17_Chr7g0229591	35.577	208	126	6	1	205	1	203	8.53e-27	105
Msa0876690	MtrunA17_Chr6g0459921	25.822	213	156	2	150	362	151	361	9.23e-27	109
Msa0876690	MtrunA17_Chr2g0283511	28.443	334	210	12	34	346	36	361	7.67e-26	107
Msa0876690	MtrunA17_Chr1g0159991	28.612	353	200	14	33	353	40	372	9.63e-26	106
Msa0876690	MtrunA17_Chr8g0347751	27.246	345	207	12	33	347	40	370	1.45e-25	106
Msa0876690	MtrunA17_Chr7g0275291	25.210	357	223	10	24	353	28	367	1.01e-24	103
Msa0876690	MtrunA17_Chr2g0283501	27.500	360	226	13	10	346	13	360	1.91e-24	102
Msa0876690	MtrunA17_Chr6g0450731	27.879	330	206	10	33	347	37	349	1.13e-23	100
Msa0876690	MtrunA17_Chr1g0191461	26.431	367	221	13	8	345	15	361	3.69e-23	99.4
Msa0876690	MtrunA17_Chr8g0352901	28.926	363	210	14	19	347	12	360	6.65e-23	98.6
Msa0876690	MtrunA17_Chr6g0450701	29.118	340	200	11	33	347	43	366	1.59e-22	97.4
Msa0876690	MtrunA17_Chr3g0104821	27.326	344	214	12	33	353	48	378	2.74e-22	97.1
Msa0876690	MtrunA17_Chr6g0450721	27.410	332	203	12	33	347	37	347	4.76e-22	95.9
Msa0876690	MtrunA17_Chr1g0159981	25.852	352	211	12	33	353	50	382	4.84e-22	96.3
Msa0876690	MtrunA17_Chr7g0273101	26.989	352	208	12	33	353	33	366	1.28e-21	95.1
Msa0876690	MtrunA17_Chr1g0178941	24.478	335	210	12	28	343	39	349	1.47e-21	94.7
Msa0876690	MtrunA17_Chr6g0450711	28.739	341	200	12	33	347	126	449	2.69e-21	94.7
Msa0876690	MtrunA17_Chr1g0178931	24.308	325	215	12	28	343	36	338	2.79e-21	93.6
Msa0876690	MtrunA17_Chr7g0226911	24.069	349	216	11	33	347	39	372	2.86e-21	94.0
Msa0876690	MtrunA17_Chr7g0266061	25.301	332	218	11	21	343	34	344	8.22e-21	92.4
Msa0876690	MtrunA17_Chr7g0226941	26.012	346	209	12	33	347	37	366	1.58e-20	92.0
Msa0876690	MtrunA17_Chr2g0283531	28.090	356	200	16	26	346	25	359	3.73e-20	90.9
Msa0876690	MtrunA17_Chr7g0226931	25.278	360	209	13	33	347	42	386	2.22e-19	89.0
Msa0876690	MtrunA17_Chr7g0229581	30.612	147	100	2	207	351	8	154	5.09e-19	83.2
Msa0876690	MtrunA17_Chr1g0198351	23.926	326	190	12	30	333	44	333	9.52e-19	86.3
Msa0876690	MtrunA17_Chr0c01g0489581	26.331	338	208	12	28	346	29	344	1.09e-18	86.3
Msa0876690	MtrunA17_Chr4g0027561	42.636	129	69	4	1	126	1	127	1.19e-18	81.6
Msa0876690	MtrunA17_Chr8g0370971	43.548	124	56	5	7	121	16	134	1.21e-18	82.4
Msa0876690	MtrunA17_Chr6g0469511	42.982	114	62	3	30	142	31	142	1.37e-18	81.6
Msa0876690	MtrunA17_Chr2g0317271	26.331	338	208	12	28	346	29	344	1.75e-18	85.9
Msa0876690	MtrunA17_Chr0c01g0489571	26.331	338	208	12	28	346	29	344	2.08e-18	85.5
Msa0876690	MtrunA17_Chr3g0093031	25.959	339	218	13	33	350	34	360	1.34e-17	83.2
Msa0876690	MtrunA17_Chr2g0301581	27.697	343	197	14	33	353	38	351	1.60e-17	82.8
Msa0876690	MtrunA17_Chr5g0440501	24.359	234	158	6	117	339	1	226	4.67e-16	77.0
Msa0876690	MtrunA17_Chr2g0301541	27.114	343	199	14	33	353	38	351	7.19e-16	78.2
Msa0876690	MtrunA17_Chr1g0198381	23.780	328	213	13	30	345	3	305	2.54e-15	75.9
Msa0876690	MtrunA17_Chr3g0112691	26.377	345	207	16	33	350	34	358	4.29e-15	75.9
Msa0876690	MtrunA17_Chr2g0321991	48.235	85	42	2	32	115	36	119	1.20e-14	70.1
Msa0876690	MtrunA17_Chr8g0339251	28.025	314	188	12	19	314	12	305	3.93e-13	69.7
Msa0876690	MtrunA17_Chr2g0284931	26.178	191	116	3	149	339	30	195	2.21e-12	65.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0876690	AT5G33370.1	69.679	343	103	1	24	366	25	366	0.0	513
Msa0876690	AT3G04290.1	66.298	362	117	2	4	365	8	364	2.29e-180	505
Msa0876690	AT5G18430.1	65.574	366	116	5	1	362	3	362	6.41e-176	493
Msa0876690	AT4G28780.1	67.160	338	108	3	28	364	30	365	6.27e-171	481
Msa0876690	AT5G33370.2	69.663	267	80	1	24	290	25	290	1.48e-137	395
Msa0876690	AT3G50400.1	41.317	334	187	9	31	356	36	368	4.13e-79	247
Msa0876690	AT2G23540.1	39.286	336	196	7	31	359	50	384	1.96e-77	243
Msa0876690	AT5G37690.1	40.764	314	181	5	32	344	30	339	2.71e-74	234
Msa0876690	AT2G04570.1	36.261	353	211	10	1	347	1	345	1.42e-70	224
Msa0876690	AT1G71691.2	37.910	335	201	6	30	363	56	384	3.84e-70	224
Msa0876690	AT2G42990.1	38.006	321	192	6	31	348	30	346	9.87e-70	223
Msa0876690	AT5G08460.1	36.134	357	222	4	7	359	28	382	2.61e-69	223
Msa0876690	AT5G15720.1	36.795	337	206	4	30	362	31	364	6.19e-69	221
Msa0876690	AT5G37690.2	39.172	314	178	6	32	344	30	331	1.20e-68	219
Msa0876690	AT4G26790.1	37.224	317	192	6	31	344	31	343	4.05e-68	218
Msa0876690	AT4G26790.2	37.224	317	192	6	31	344	31	343	4.05e-68	218
Msa0876690	AT5G42170.1	36.478	318	192	6	30	344	51	361	5.49e-67	216
Msa0876690	AT5G03820.1	37.609	343	202	7	10	344	11	349	6.65e-67	215
Msa0876690	AT1G75890.2	38.199	322	186	9	24	339	43	357	1.37e-66	215
Msa0876690	AT5G03810.1	37.758	339	200	7	13	344	11	345	1.50e-66	214
Msa0876690	AT1G29660.1	35.854	357	222	5	9	362	12	364	1.71e-66	214
Msa0876690	AT5G03820.2	37.609	343	202	7	10	344	39	377	2.30e-66	215
Msa0876690	AT1G75890.3	38.199	322	186	9	24	339	72	386	2.61e-66	215
Msa0876690	AT5G45670.1	36.550	342	210	5	1	339	1	338	7.34e-66	213
Msa0876690	AT4G18970.1	38.535	314	184	5	30	339	29	337	5.59e-65	211
Msa0876690	AT1G29670.1	35.068	365	225	6	4	362	5	363	6.36e-65	210
Msa0876690	AT1G71250.1	33.724	341	221	3	24	362	36	373	7.23e-65	211
Msa0876690	AT1G75880.1	35.028	354	217	6	2	345	18	368	1.05e-64	210
Msa0876690	AT4G18970.2	38.535	314	184	5	30	339	29	337	2.86e-64	210
Msa0876690	AT1G06990.1	35.987	314	193	5	30	339	38	347	3.32e-64	208
Msa0876690	AT1G75890.1	36.336	333	190	9	24	339	43	370	3.82e-64	209
Msa0876690	AT1G29670.2	35.068	365	225	6	4	362	73	431	3.93e-64	210
Msa0876690	AT1G75880.2	35.028	354	216	7	2	345	18	367	8.93e-64	208
Msa0876690	AT1G58430.1	35.692	325	202	6	31	351	37	358	2.05e-63	206
Msa0876690	AT3G16370.1	36.792	318	193	7	31	344	32	345	3.74e-63	206
Msa0876690	AT5G41890.1	33.777	376	215	10	2	356	7	369	5.90e-63	206
Msa0876690	AT1G33811.1	36.705	346	208	8	24	362	29	370	7.19e-63	205
Msa0876690	AT2G24560.1	35.806	310	186	7	31	333	36	339	7.61e-63	205
Msa0876690	AT2G31540.1	37.421	318	186	7	31	341	37	348	8.69e-63	205
Msa0876690	AT3G53100.1	36.416	346	209	9	12	352	12	351	1.38e-62	204
Msa0876690	AT1G74460.1	36.795	337	206	7	7	341	3	334	2.68e-62	204
Msa0876690	AT2G30220.1	36.280	328	196	7	31	351	35	356	3.68e-62	203
Msa0876690	AT5G22810.1	36.137	321	193	8	31	344	36	351	2.55e-60	198
Msa0876690	AT2G30310.1	35.737	319	192	7	30	341	35	347	8.98e-60	197
Msa0876690	AT3G14820.1	34.421	337	202	9	23	352	26	350	8.01e-59	194
Msa0876690	AT5G45950.1	34.462	325	203	9	29	351	40	356	2.03e-58	193
Msa0876690	AT1G20120.1	34.295	312	198	6	31	339	80	387	3.44e-58	194
Msa0876690	AT5G45960.1	35.350	314	188	8	31	335	49	356	5.28e-58	193
Msa0876690	AT1G59406.1	34.286	350	216	8	7	350	8	349	6.56e-58	192
Msa0876690	AT1G59030.1	34.286	350	216	8	7	350	8	349	6.56e-58	192
Msa0876690	AT1G58725.1	34.286	350	216	8	7	350	8	349	6.56e-58	192
Msa0876690	AT2G19060.1	34.365	323	189	9	30	346	31	336	1.73e-57	191
Msa0876690	AT1G75900.1	34.906	318	191	8	31	341	45	353	2.91e-57	191
Msa0876690	AT2G40250.1	32.808	317	200	5	33	341	40	351	4.93e-56	187
Msa0876690	AT1G58520.3	35.119	336	197	9	21	350	22	342	6.53e-56	186
Msa0876690	AT1G58525.1	35.119	336	197	9	21	350	22	342	6.53e-56	186
Msa0876690	AT1G20132.1	33.229	319	205	7	24	339	57	370	6.87e-55	185
Msa0876690	AT2G19050.1	32.915	319	197	6	30	346	32	335	2.22e-54	182
Msa0876690	AT1G20135.1	34.132	334	200	9	12	340	9	327	1.05e-53	180
Msa0876690	AT3G43570.1	32.464	345	194	9	10	350	11	320	1.98e-53	179
Msa0876690	AT5G55050.1	32.743	339	214	8	32	361	42	375	2.92e-53	181
Msa0876690	AT4G10950.2	31.832	333	223	4	30	360	72	402	4.51e-53	181
Msa0876690	AT2G19010.1	32.295	353	216	10	3	350	6	340	1.28e-52	178
Msa0876690	AT4G30140.1	34.018	341	204	9	21	360	27	347	1.58e-52	178
Msa0876690	AT1G71691.1	34.737	285	181	5	80	363	3	283	3.03e-52	175
Msa0876690	AT2G19010.2	33.742	326	195	9	30	350	61	370	4.28e-52	177
Msa0876690	AT4G10950.1	31.737	334	218	6	30	360	72	398	4.20e-50	173
Msa0876690	AT2G24560.2	34.686	271	164	7	31	294	36	300	4.55e-49	168
Msa0876690	AT1G20130.1	33.537	328	199	10	24	339	200	520	6.79e-49	172
Msa0876690	AT1G20130.2	33.537	328	199	10	24	339	180	500	8.23e-49	172
Msa0876690	AT5G40990.1	32.565	347	211	8	30	363	38	374	5.19e-48	167
Msa0876690	AT5G15720.3	32.517	286	189	3	81	362	48	333	6.14e-48	165
Msa0876690	AT4G16230.1	42.411	224	119	5	12	229	10	229	6.88e-48	163
Msa0876690	AT5G15720.2	36.059	269	165	4	30	294	31	296	1.06e-47	164
Msa0876690	AT1G71691.3	38.550	262	154	6	30	290	56	311	1.31e-47	164
Msa0876690	AT1G53940.2	33.524	349	203	12	31	363	41	376	2.80e-47	165
Msa0876690	AT1G73610.1	33.636	330	199	8	25	351	31	343	5.43e-47	163
Msa0876690	AT1G71120.1	33.138	341	206	12	24	356	26	352	8.59e-47	163
Msa0876690	AT5G63170.1	33.657	309	184	9	31	335	30	321	1.36e-45	159
Msa0876690	AT2G19050.2	34.375	256	157	4	30	283	32	278	1.15e-44	155
Msa0876690	AT1G53920.1	29.558	362	226	9	3	346	14	364	1.11e-43	155
Msa0876690	AT1G75920.2	31.373	357	204	12	10	346	6	341	4.51e-43	153
Msa0876690	AT3G14225.1	30.347	346	220	7	31	362	39	377	1.14e-42	152
Msa0876690	AT3G14225.2	30.398	352	208	8	31	362	39	373	1.39e-42	152
Msa0876690	AT1G53990.1	30.747	348	211	9	31	365	37	367	1.65e-42	152
Msa0876690	AT3G43550.1	34.066	273	169	6	21	290	22	286	7.88e-41	145
Msa0876690	AT2G03980.2	30.696	316	202	8	30	338	44	349	1.97e-39	144
Msa0876690	AT2G03980.3	30.696	316	202	8	30	338	44	349	1.97e-39	144
Msa0876690	AT2G03980.1	30.696	316	202	8	30	338	44	349	1.97e-39	144
Msa0876690	AT2G03980.4	30.696	316	202	8	30	338	44	349	1.97e-39	144
Msa0876690	AT1G75920.1	30.108	372	204	13	10	346	1	351	2.80e-39	143
Msa0876690	AT1G75910.1	30.836	347	215	10	12	346	8	341	4.44e-39	142
Msa0876690	AT1G23500.1	32.432	333	203	9	20	348	27	341	1.23e-38	141
Msa0876690	AT1G75930.1	31.014	345	213	11	10	344	6	335	8.51e-38	139
Msa0876690	AT2G31550.1	33.019	212	133	3	137	343	2	209	8.51e-37	133
Msa0876690	AT1G75920.3	29.830	352	185	11	10	346	6	310	2.21e-34	129
Msa0876690	AT1G75920.4	29.967	307	178	11	56	346	28	313	5.55e-31	120
Msa0876690	AT1G56670.1	30.537	298	176	8	66	345	73	357	2.12e-30	119
Msa0876690	AT3G14220.1	27.072	362	214	15	23	365	26	356	9.95e-29	115
Msa0876690	AT1G53940.1	32.234	273	162	11	31	293	41	300	1.48e-28	113
Msa0876690	AT1G54030.1	27.139	339	217	12	28	362	51	363	5.27e-28	114
Msa0876690	AT2G04020.1	32.895	228	133	6	30	247	44	261	8.24e-28	110
Msa0876690	AT1G09390.1	28.190	337	209	9	26	345	34	354	7.43e-27	110
Msa0876690	AT2G04020.2	28.115	313	168	10	30	336	44	305	8.22e-27	108
Msa0876690	AT3G09930.2	26.786	336	212	13	27	349	37	351	2.43e-26	108
Msa0876690	AT3G09930.1	26.786	336	212	13	27	349	37	351	2.43e-26	108
Msa0876690	AT5G03610.1	25.281	356	214	13	7	334	8	339	5.41e-26	107
Msa0876690	AT1G67830.1	28.775	351	200	14	33	349	34	368	1.05e-25	106
Msa0876690	AT5G45910.1	28.940	349	195	16	33	346	34	364	1.15e-25	106
Msa0876690	AT2G27360.1	29.640	361	208	17	28	359	32	375	1.26e-25	107
Msa0876690	AT1G28570.1	28.133	391	233	18	1	359	1	375	6.65e-25	104
Msa0876690	AT1G54790.3	27.429	350	209	12	33	353	36	369	1.39e-24	103
Msa0876690	AT3G26430.1	26.705	352	211	10	33	353	35	370	2.37e-24	103
Msa0876690	AT1G28600.1	27.949	390	218	17	1	353	1	364	3.21e-24	102
Msa0876690	AT3G27950.1	28.152	341	201	10	33	347	36	358	4.70e-24	102
Msa0876690	AT4G01130.1	27.056	377	225	14	8	350	11	371	6.46e-24	102
Msa0876690	AT1G28610.2	27.778	378	222	16	1	346	1	359	8.60e-24	101
Msa0876690	AT1G28670.1	27.968	379	229	17	2	349	3	368	1.79e-23	100
Msa0876690	AT5G14450.1	26.879	346	204	12	33	346	45	373	3.64e-23	100
Msa0876690	AT1G31550.2	28.000	400	229	18	1	362	1	379	7.79e-23	99.0
Msa0876690	AT1G28580.1	29.143	350	204	17	28	349	36	369	1.38e-22	98.2
Msa0876690	AT4G16220.1	50.000	126	52	5	1	121	1	120	5.01e-22	94.0
Msa0876690	AT3G62280.1	27.381	336	207	11	33	350	40	356	5.90e-22	96.3
Msa0876690	AT1G28590.1	27.248	367	219	14	28	358	35	389	6.71e-22	96.7
Msa0876690	AT1G28650.1	27.273	374	230	16	1	346	7	366	6.96e-21	93.2
Msa0876690	AT1G28640.1	26.842	380	231	18	2	349	3	367	1.31e-20	92.8
Msa0876690	AT1G54020.2	24.702	336	228	8	30	361	34	348	1.61e-20	92.0
Msa0876690	AT1G54790.1	26.286	350	213	12	33	353	35	368	2.70e-20	91.7
Msa0876690	AT3G05180.1	26.100	341	213	11	33	346	40	368	5.82e-20	90.5
Msa0876690	AT1G54000.1	24.074	378	243	13	1	359	2	354	2.47e-19	89.0
Msa0876690	AT1G28660.2	28.460	383	220	19	2	349	3	366	2.62e-19	89.0
Msa0876690	AT1G56670.2	30.126	239	141	7	65	290	72	297	4.68e-19	87.0
Msa0876690	AT4G16233.1	32.540	126	84	1	238	362	5	130	1.28e-18	81.6
Msa0876690	AT3G14210.1	25.474	369	216	14	18	361	24	358	2.58e-18	85.9
Msa0876690	AT1G54030.2	28.631	241	146	10	28	265	51	268	2.80e-18	85.1
Msa0876690	AT5G03600.2	26.496	351	216	16	3	339	20	342	8.57e-18	84.0
Msa0876690	AT5G03600.1	27.077	325	197	16	26	339	12	307	2.37e-16	79.3
Msa0876690	AT4G01130.3	26.712	292	175	10	91	350	1	285	2.46e-16	79.0
Msa0876690	AT2G36325.1	24.260	338	213	13	27	348	45	355	7.00e-15	75.5
Msa0876690	AT3G62280.2	29.858	211	122	7	33	236	40	231	2.02e-12	67.8
Msa0876690	AT1G28600.2	31.390	223	105	13	1	199	1	199	1.20e-11	64.3
Msa0876690	AT1G28580.2	25.660	265	168	11	106	349	32	288	6.25e-11	63.2

Find 71 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGCGTTGAAATAATTAAAA+AGG	0.216438	6_1:-15061328	Msa0876690:three_prime_UTR
AGTACAATGTAACAACATTA+TGG	0.219838	6_1:+15061417	None:intergenic
ATAGAGACGTGTATGCATTT+TGG	0.247136	6_1:-15061752	Msa0876690:CDS
AATTCCAGCTGAAGCAAAAT+TGG	0.255973	6_1:+15063593	None:intergenic
CAACTTGAAAACATGCTTCT+AGG	0.266917	6_1:-15062250	Msa0876690:CDS
GTTACAGAAACTATATGATT+TGG	0.274074	6_1:-15062398	Msa0876690:intron
CCAAGAACATTCTTAGTGTT+TGG	0.281405	6_1:-15064450	Msa0876690:CDS
ATAAGATACTTGACATATTC+AGG	0.294015	6_1:+15063038	None:intergenic
CCAAACACTAAGAATGTTCT+TGG	0.305388	6_1:+15064450	None:intergenic
GGAGATTCACTTGTTGATAA+TGG	0.312652	6_1:-15064429	Msa0876690:CDS
TGACGAGACCTTGCAGAATA+AGG	0.321945	6_1:+15063071	None:intergenic
TGATATTATGTCTGGCTCTA+AGG	0.324308	6_1:-15061685	Msa0876690:CDS
CTTAATTCAGGGCTTAAGTA+TGG	0.326158	6_1:+15063639	None:intergenic
AGTAGGTTAAGTGCTCTTAT+TGG	0.359500	6_1:-15063182	Msa0876690:CDS
AAGATAGTGCTAAGATTCAT+TGG	0.366536	6_1:+15061651	None:intergenic
ACATGCTTCTAGGACTTAAC+AGG	0.380135	6_1:-15062240	Msa0876690:CDS
TTACAGAAACTATATGATTT+GGG	0.387755	6_1:-15062397	Msa0876690:intron
AGAGTTCTTGTGACAGGAAC+AGG	0.398532	6_1:-15062367	Msa0876690:CDS
GTACAATGTAACAACATTAT+GGG	0.400676	6_1:+15061418	None:intergenic
CATAATCCAATACCATTGTT+AGG	0.403360	6_1:+15061801	None:intergenic
ATTGCACAACGTGGTAGAAA+TGG	0.411691	6_1:-15062319	Msa0876690:CDS
CAAAGATGCCATTGAAAATG+AGG	0.424225	6_1:+15064539	None:intergenic
AGAGGAGAAAAGCTTCTAGT+TGG	0.427534	6_1:-15063618	Msa0876690:CDS
ATTGTGAATGATATTATGTC+TGG	0.429709	6_1:-15061693	Msa0876690:CDS
TAAGAGCACTTAACCTACTT+TGG	0.431627	6_1:+15063186	None:intergenic
TAAACTTAACTGATAAAATC+AGG	0.445628	6_1:+15064297	None:intergenic
CAAGGACCTAACAATGGTAT+TGG	0.445856	6_1:-15061807	Msa0876690:CDS
TACTTAAGCCCTGAATTAAG+AGG	0.450132	6_1:-15063636	Msa0876690:CDS
GTTGATAATCAATACCATAA+GGG	0.451249	6_1:+15064364	None:intergenic
CAACCATCTCATAGACCAAC+TGG	0.454129	6_1:-15064345	Msa0876690:CDS
TAATGGAAATAACAATTACT+TGG	0.456317	6_1:-15064412	Msa0876690:CDS
GACTTAACAGGAAACTTGGC+AGG	0.465462	6_1:-15062228	Msa0876690:CDS
ATCAGGAATATTGTAGCCAT+TGG	0.467892	6_1:+15064314	None:intergenic
CTAGGACTTAACAGGAAACT+TGG	0.469763	6_1:-15062232	Msa0876690:CDS
TGTGACAGGAACAGGACCTA+TGG	0.476833	6_1:-15062359	Msa0876690:CDS
ATTAATAATCCCGGTCAATA+CGG	0.480874	6_1:-15062160	Msa0876690:intron
TCTTAGCACTATCTTAGCAT+TGG	0.484703	6_1:-15061643	Msa0876690:CDS
CCAATGCAAACACTTGTGCT+TGG	0.488506	6_1:+15061573	None:intergenic
GGTTGATAATCAATACCATA+AGG	0.491148	6_1:+15064363	None:intergenic
TGCATTCCATCCATCTGAAA+AGG	0.494067	6_1:-15061727	Msa0876690:CDS
CTTAACTTTATTAATAATCC+CGG	0.500065	6_1:-15062169	Msa0876690:CDS
GGGCTTAAGTATGGCAATGT+TGG	0.506421	6_1:+15063648	None:intergenic
GTCTCTATTTGAGCACAAGT+TGG	0.508907	6_1:+15061767	None:intergenic
ATGAAATTAGTACTACATAA+AGG	0.509543	6_1:+15061290	None:intergenic
CCAAGCACAAGTGTTTGCAT+TGG	0.523392	6_1:-15061573	Msa0876690:three_prime_UTR
CACAAAATCATTGCCACCAA+CGG	0.525761	6_1:+15063112	None:intergenic
AGCGTGATTACCGTATTGAC+CGG	0.526253	6_1:+15062150	None:intergenic
CTTGTTCTCATAACCGTTGG+TGG	0.534126	6_1:-15063125	Msa0876690:CDS
GTGACAGGAACAGGACCTAT+GGG	0.546023	6_1:-15062358	Msa0876690:CDS
GCTAGAAGAGTTCTTGTGAC+AGG	0.550959	6_1:-15062373	Msa0876690:CDS
AAAATAGCTTGTTGTGGACA+AGG	0.552118	6_1:-15061825	Msa0876690:CDS
TTGATAATCAATACCATAAG+GGG	0.553672	6_1:+15064365	None:intergenic
TTGTTGATGCATCCTTTGTG+TGG	0.558257	6_1:-15061383	Msa0876690:three_prime_UTR
CTACCAGTTGGTCTATGAGA+TGG	0.564585	6_1:+15064342	None:intergenic
CCACGTTGTGCAATTTCTGA+AGG	0.567063	6_1:+15062328	None:intergenic
ATTGGAATACTCAATGACAC+TGG	0.571915	6_1:-15063573	Msa0876690:CDS
ACTTGGTGCCTTATTCTGCA+AGG	0.583391	6_1:-15063079	Msa0876690:CDS
ACATCTAAAATAGCTTGTTG+TGG	0.584171	6_1:-15061831	Msa0876690:CDS
GCACTTGTTCTCATAACCGT+TGG	0.594141	6_1:-15063128	Msa0876690:CDS
GGGTGCATCAGCACGTGCAG+TGG	0.594910	6_1:+15064386	None:intergenic
TACAATGTAACAACATTATG+GGG	0.611328	6_1:+15061419	None:intergenic
TTGATATAGCTTCCACACAA+AGG	0.619608	6_1:+15061371	None:intergenic
TCTGAAGGAACACAGCCCAT+AGG	0.624000	6_1:+15062343	None:intergenic
ACTCTATCTTCGAATTCATG+TGG	0.630846	6_1:+15061614	None:intergenic
CCAACTGGTAGATTCTCCAA+TGG	0.638927	6_1:-15064330	Msa0876690:CDS
TTGGAATACTCAATGACACT+GGG	0.640433	6_1:-15063572	Msa0876690:CDS
CCATTGGAGAATCTACCAGT+TGG	0.651226	6_1:+15064330	None:intergenic
ACTTAACAGGAAACTTGGCA+GGG	0.673315	6_1:-15062227	Msa0876690:CDS
CCTTCAGAAATTGCACAACG+TGG	0.692224	6_1:-15062328	Msa0876690:CDS
TGATAATCAATACCATAAGG+GGG	0.707998	6_1:+15064366	None:intergenic
TGTGGACAAGGACCTAACAA+TGG	0.712232	6_1:-15061813	Msa0876690:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATTAAAATAAATAAAAAA+TGG	-	chr6_1:15062381-15062400	Msa0876690:CDS	0.0%
!!	TATTAAGTAAAAATTAAAAC+CGG	-	chr6_1:15061779-15061798	Msa0876690:CDS	10.0%
!!!	AAATGGTTTAAATATATTTT+AGG	-	chr6_1:15062398-15062417	Msa0876690:intron	10.0%
!!	TAAAACATATATTATTTGTT+TGG	-	chr6_1:15062996-15063015	Msa0876690:intron	10.0%
!!!	TTTAAAATTTTAAAAACAGA+AGG	+	chr6_1:15063237-15063256	None:intergenic	10.0%
!!	TTCATTTGATTATACAAAAA+GGG	+	chr6_1:15062077-15062096	None:intergenic	15.0%
!!	ATGATTAGAGTATATAAAAT+TGG	+	chr6_1:15062312-15062331	None:intergenic	15.0%
!!!	TTGATTAATATACATCTTTT+AGG	-	chr6_1:15062854-15062873	Msa0876690:intron	15.0%
!!!	ATTATTTGTTTGGATTTTTT+AGG	-	chr6_1:15063006-15063025	Msa0876690:intron	15.0%
!!!	AAAGTCAATGATTTTTTTTT+TGG	+	chr6_1:15063168-15063187	None:intergenic	15.0%
!!!	AAATTTTTTATATATAGACC+CGG	+	chr6_1:15063912-15063931	None:intergenic	15.0%
!!	TAATGGAAATAACAATTACT+TGG	-	chr6_1:15061407-15061426	Msa0876690:three_prime_UTR	20.0%
!!	TAAACTTAACTGATAAAATC+AGG	+	chr6_1:15061525-15061544	None:intergenic	20.0%
!!	AAATGAATGTTGAAACAAAA+GGG	+	chr6_1:15061595-15061614	None:intergenic	20.0%
!!	TAAATGAATGTTGAAACAAA+AGG	+	chr6_1:15061596-15061615	None:intergenic	20.0%
!!	TTCAACATTCATTTATTTGA+AGG	-	chr6_1:15061601-15061620	Msa0876690:three_prime_UTR	20.0%
!!!	TTTAGCAATGTTTTAAAAAC+CGG	-	chr6_1:15061669-15061688	Msa0876690:CDS	20.0%
!!!	TTTTTTTAGGCAAAAAGAAA+TGG	+	chr6_1:15062005-15062024	None:intergenic	20.0%
!!!	AAGAAATGAATGCTTTTTTT+AGG	+	chr6_1:15062018-15062037	None:intergenic	20.0%
!!	GTTCATTTGATTATACAAAA+AGG	+	chr6_1:15062078-15062097	None:intergenic	20.0%
!!!	CTAACTAATTGAATTTTTTC+AGG	-	chr6_1:15062129-15062148	Msa0876690:intron	20.0%
!!!	TAATTATGTATTGGTGTTTA+AGG	+	chr6_1:15062367-15062386	None:intergenic	20.0%
!!	TGAAAAACGAGAAAATTTAT+AGG	+	chr6_1:15062456-15062475	None:intergenic	20.0%
!!!	TATAAATTTTCTCGTTTTTC+AGG	-	chr6_1:15062455-15062474	Msa0876690:intron	20.0%
!!!	TGCAGTGAATTTTTTTTTTT+AGG	+	chr6_1:15062500-15062519	None:intergenic	20.0%
!!	TCAAAGAATTATCATTAAAG+AGG	+	chr6_1:15062838-15062857	None:intergenic	20.0%
!!	TTACAGAAACTATATGATTT+GGG	-	chr6_1:15063422-15063441	Msa0876690:intron	20.0%
!!	CTTAACTTTATTAATAATCC+CGG	-	chr6_1:15063650-15063669	Msa0876690:CDS	20.0%
!!!	ATGACAAAAGATATGTTTTA+GGG	-	chr6_1:15063738-15063757	Msa0876690:intron	20.0%
!!!	TTTTTAATTATTTCAACGCA+AGG	+	chr6_1:15064492-15064511	None:intergenic	20.0%
!!	TTGCGTTGAAATAATTAAAA+AGG	-	chr6_1:15064491-15064510	Msa0876690:CDS	20.0%
!!	ATGAAATTAGTACTACATAA+AGG	+	chr6_1:15064532-15064551	None:intergenic	20.0%
!!!	CTATTGTTTTTAGAAATGTG+TGG	+	chr6_1:15061247-15061266	None:intergenic	25.0%
!!!	TTGGAGGAATATTTTTTCAT+GGG	-	chr6_1:15061334-15061353	Msa0876690:three_prime_UTR	25.0%
!!	TTGATAATCAATACCATAAG+GGG	+	chr6_1:15061457-15061476	None:intergenic	25.0%
!!!	GTTGATAATCAATACCATAA+GGG	+	chr6_1:15061458-15061477	None:intergenic	25.0%
!	TAACCTATTGAACCATAAAT+CGG	+	chr6_1:15061867-15061886	None:intergenic	25.0%
!	CAAATGTGAATGAAATTTGA+AGG	+	chr6_1:15062047-15062066	None:intergenic	25.0%
!!!	ACTGCAAAATTTTAAAGTTG+AGG	-	chr6_1:15062514-15062533	Msa0876690:intron	25.0%
!!	TTTTGTGAATAACTACTACT+TGG	-	chr6_1:15062723-15062742	Msa0876690:intron	25.0%
!	ATAAGATACTTGACATATTC+AGG	+	chr6_1:15062784-15062803	None:intergenic	25.0%
!	GTACAATTAATCAAAAGCTT+AGG	-	chr6_1:15062876-15062895	Msa0876690:intron	25.0%
!!	ATTGCTTTAAATTCATGCTA+AGG	+	chr6_1:15062917-15062936	None:intergenic	25.0%
!!!	CAAAAAGAGCTTTTAAAAGT+AGG	-	chr6_1:15063189-15063208	Msa0876690:CDS	25.0%
!	ATAACTATGAGAAGTAACAT+AGG	+	chr6_1:15063395-15063414	None:intergenic	25.0%
!	GTTACAGAAACTATATGATT+TGG	-	chr6_1:15063421-15063440	Msa0876690:intron	25.0%
!!	TTTTGTCATGATAATTTCGA+CGG	+	chr6_1:15063727-15063746	None:intergenic	25.0%
!!	CATGACAAAAGATATGTTTT+AGG	-	chr6_1:15063737-15063756	Msa0876690:intron	25.0%
!!!	TTATGCAGTGTTTTAAAACT+CGG	-	chr6_1:15063802-15063821	Msa0876690:intron	25.0%
!!!	ATTTTAGATGTTTTGAAACC+TGG	+	chr6_1:15063979-15063998	None:intergenic	25.0%
!	ATTGTGAATGATATTATGTC+TGG	-	chr6_1:15064126-15064145	Msa0876690:intron	25.0%
!!!	TGTGCTTGGTTTTATTAATT+AGG	+	chr6_1:15064235-15064254	None:intergenic	25.0%
!	TACAATGTAACAACATTATG+GGG	+	chr6_1:15064403-15064422	None:intergenic	25.0%
!	GTACAATGTAACAACATTAT+GGG	+	chr6_1:15064404-15064423	None:intergenic	25.0%
!	AGTACAATGTAACAACATTA+TGG	+	chr6_1:15064405-15064424	None:intergenic	25.0%
!!!	TTTTTGATTATTTCAACGCA+AGG	+	chr6_1:15064558-15064577	None:intergenic	25.0%
!!	TTTTTAGAAATGTGTGGATG+TGG	+	chr6_1:15061241-15061260	None:intergenic	30.0%
!	TTTCAAAGCCTCATTTTCAA+TGG	-	chr6_1:15061272-15061291	Msa0876690:three_prime_UTR	30.0%
!!!	GCTTTGTTCATTTTAGTTGT+TGG	-	chr6_1:15061315-15061334	Msa0876690:three_prime_UTR	30.0%
!!!	TTGTTCATTTTAGTTGTTGG+AGG	-	chr6_1:15061318-15061337	Msa0876690:three_prime_UTR	30.0%
!!!	GTTGGAGGAATATTTTTTCA+TGG	-	chr6_1:15061333-15061352	Msa0876690:three_prime_UTR	30.0%
	TGATAATCAATACCATAAGG+GGG	+	chr6_1:15061456-15061475	None:intergenic	30.0%
!!	GGTTGATAATCAATACCATA+AGG	+	chr6_1:15061459-15061478	None:intergenic	30.0%
!	AATAGAGTCGGTGATATTTT+AGG	-	chr6_1:15061698-15061717	Msa0876690:CDS	30.0%
!	ATAGAGTCGGTGATATTTTA+GGG	-	chr6_1:15061699-15061718	Msa0876690:CDS	30.0%
!!	TTTTAGGGAAATGATGCAAT+TGG	-	chr6_1:15061714-15061733	Msa0876690:CDS	30.0%
	CAGTTCAATCACAGTTAAAT+CGG	-	chr6_1:15061743-15061762	Msa0876690:CDS	30.0%
	CAATCAATTGAACCAAAAAC+AGG	+	chr6_1:15061896-15061915	None:intergenic	30.0%
	AAATGGATGTTGTAACAAGA+AGG	+	chr6_1:15061988-15062007	None:intergenic	30.0%
	ATCAAATGAACATTGACACA+TGG	-	chr6_1:15062087-15062106	Msa0876690:intron	30.0%
!!!	ATTTTTTCAGGTCAGAAACT+TGG	-	chr6_1:15062141-15062160	Msa0876690:intron	30.0%
	CGAAAAGTGGTATATTTGTA+GGG	+	chr6_1:15062425-15062444	None:intergenic	30.0%
!!!	ATTTTCAAGAGTACCAAAGT+AGG	-	chr6_1:15062620-15062639	Msa0876690:intron	30.0%
!!	CTTTTAAAAGTAGGAACTCA+AGG	-	chr6_1:15063198-15063217	Msa0876690:CDS	30.0%
!	ATCAAACAAGTCAAGTCTTT+TGG	-	chr6_1:15063361-15063380	Msa0876690:intron	30.0%
	ATTAATAATCCCGGTCAATA+CGG	-	chr6_1:15063659-15063678	Msa0876690:CDS	30.0%
	TGACAACGTAGCTATAATTT+CGG	+	chr6_1:15063776-15063795	None:intergenic	30.0%
!!	ACATCTAAAATAGCTTGTTG+TGG	-	chr6_1:15063988-15064007	Msa0876690:intron	30.0%
	CATAATCCAATACCATTGTT+AGG	+	chr6_1:15064021-15064040	None:intergenic	30.0%
	AAGATAGTGCTAAGATTCAT+TGG	+	chr6_1:15064171-15064190	None:intergenic	30.0%
	CAAAGATGCCATTGAAAATG+AGG	+	chr6_1:15061283-15061302	None:intergenic	35.0%
	CCAAACACTAAGAATGTTCT+TGG	+	chr6_1:15061372-15061391	None:intergenic	35.0%
	CCAAGAACATTCTTAGTGTT+TGG	-	chr6_1:15061369-15061388	Msa0876690:three_prime_UTR	35.0%
!	GGAGATTCACTTGTTGATAA+TGG	-	chr6_1:15061390-15061409	Msa0876690:three_prime_UTR	35.0%
	ATCAGGAATATTGTAGCCAT+TGG	+	chr6_1:15061508-15061527	None:intergenic	35.0%
	AACCGGAATGAAAATAGAGT+CGG	-	chr6_1:15061686-15061705	Msa0876690:CDS	35.0%
	GTTGAACAAGTTTCTTCAAC+CGG	+	chr6_1:15061801-15061820	None:intergenic	35.0%
!	GTTGAAGAAACTTGTTCAAC+TGG	-	chr6_1:15061801-15061820	Msa0876690:CDS	35.0%
	AACACAAGGATCAAACCAAT+CGG	-	chr6_1:15061833-15061852	Msa0876690:CDS	35.0%
!	AAATCGGCAAATTTTCCGAT+TGG	+	chr6_1:15061851-15061870	None:intergenic	35.0%
!!	TCGGAAAATTTGCCGATTTA+TGG	-	chr6_1:15061852-15061871	Msa0876690:intron	35.0%
!!	TTGCCGATTTATGGTTCAAT+AGG	-	chr6_1:15061861-15061880	Msa0876690:intron	35.0%
	CAATTGAACCAAAAACAGGT+CGG	+	chr6_1:15061892-15061911	None:intergenic	35.0%
	GTTCAATTGATTGAATCGAC+TGG	-	chr6_1:15061903-15061922	Msa0876690:intron	35.0%
!	ATTGATTGAATCGACTGGTT+CGG	-	chr6_1:15061908-15061927	Msa0876690:intron	35.0%
	GAAGGCTCATTCAATATGTA+TGG	+	chr6_1:15061970-15061989	None:intergenic	35.0%
	CTTAATTCAGGGCTTAAGTA+TGG	+	chr6_1:15062183-15062202	None:intergenic	35.0%
	TACTTAAGCCCTGAATTAAG+AGG	-	chr6_1:15062183-15062202	Msa0876690:CDS	35.0%
!	GCTTTTCTCCTCTTAATTCA+GGG	+	chr6_1:15062194-15062213	None:intergenic	35.0%
!	AGCTTTTCTCCTCTTAATTC+AGG	+	chr6_1:15062195-15062214	None:intergenic	35.0%
	AATTCCAGCTGAAGCAAAAT+TGG	+	chr6_1:15062229-15062248	None:intergenic	35.0%
!	AATTTTGCTTCAGCTGGAAT+TGG	-	chr6_1:15062228-15062247	Msa0876690:CDS	35.0%
	ATTGGAATACTCAATGACAC+TGG	-	chr6_1:15062246-15062265	Msa0876690:CDS	35.0%
	TTGGAATACTCAATGACACT+GGG	-	chr6_1:15062247-15062266	Msa0876690:CDS	35.0%
	GCGAAAAGTGGTATATTTGT+AGG	+	chr6_1:15062426-15062445	None:intergenic	35.0%
	ATAGGTACTAAAGCGAAAAG+TGG	+	chr6_1:15062438-15062457	None:intergenic	35.0%
	GAGGACTTATATTATGCACA+TGG	-	chr6_1:15062533-15062552	Msa0876690:intron	35.0%
!!	TAAGAGCACTTAACCTACTT+TGG	+	chr6_1:15062636-15062655	None:intergenic	35.0%
	AGTAGGTTAAGTGCTCTTAT+TGG	-	chr6_1:15062637-15062656	Msa0876690:intron	35.0%
!	TGAGTACCAAAAACTTTTGC+AGG	-	chr6_1:15062807-15062826	Msa0876690:intron	35.0%
!	GTGTTACCTGCAAAAGTTTT+TGG	+	chr6_1:15062816-15062835	None:intergenic	35.0%
!!!	GAAGCATGTTTTCAAGTTGA+GGG	+	chr6_1:15063568-15063587	None:intergenic	35.0%
!!!	AGAAGCATGTTTTCAAGTTG+AGG	+	chr6_1:15063569-15063588	None:intergenic	35.0%
	CAACTTGAAAACATGCTTCT+AGG	-	chr6_1:15063569-15063588	Msa0876690:CDS	35.0%
!	TTTTCATTGCTGCAAACACT+GGG	-	chr6_1:15063618-15063637	Msa0876690:CDS	35.0%
!!	TTTATGTTGTTGCTTTGACC+AGG	-	chr6_1:15063958-15063977	Msa0876690:intron	35.0%
!!	AAAATAGCTTGTTGTGGACA+AGG	-	chr6_1:15063994-15064013	Msa0876690:intron	35.0%
!	ATAGAGACGTGTATGCATTT+TGG	-	chr6_1:15064067-15064086	Msa0876690:intron	35.0%
!	TAGAGACGTGTATGCATTTT+GGG	-	chr6_1:15064068-15064087	Msa0876690:intron	35.0%
!!	TGATATTATGTCTGGCTCTA+AGG	-	chr6_1:15064134-15064153	Msa0876690:intron	35.0%
	TCTTAGCACTATCTTAGCAT+TGG	-	chr6_1:15064176-15064195	Msa0876690:intron	35.0%
	ACTCTATCTTCGAATTCATG+TGG	+	chr6_1:15064208-15064227	None:intergenic	35.0%
	TTGATATAGCTTCCACACAA+AGG	+	chr6_1:15064451-15064470	None:intergenic	35.0%
!!!	CACCGACTCTATTTTCATTC+CGG	+	chr6_1:15061691-15061710	None:intergenic	40.0%
!	ACTGGTTCAATGAGAACACA+AGG	-	chr6_1:15061819-15061838	Msa0876690:CDS	40.0%
!	AGGTTAAACCGACCTGTTTT+TGG	-	chr6_1:15061881-15061900	Msa0876690:intron	40.0%
	AGAGGAGAAAAGCTTCTAGT+TGG	-	chr6_1:15062201-15062220	Msa0876690:CDS	40.0%
	CACAAAATCATTGCCACCAA+CGG	+	chr6_1:15062710-15062729	None:intergenic	40.0%
	ATTGCACAACGTGGTAGAAA+TGG	-	chr6_1:15063500-15063519	Msa0876690:intron	40.0%
!!	ACATGCTTCTAGGACTTAAC+AGG	-	chr6_1:15063579-15063598	Msa0876690:CDS	40.0%
	CTAGGACTTAACAGGAAACT+TGG	-	chr6_1:15063587-15063606	Msa0876690:CDS	40.0%
	ACTTAACAGGAAACTTGGCA+GGG	-	chr6_1:15063592-15063611	Msa0876690:CDS	40.0%
!	GTTTTCATTGCTGCAAACAC+TGG	-	chr6_1:15063617-15063636	Msa0876690:CDS	40.0%
	ACCAGTGATATATCCGGTTA+AGG	-	chr6_1:15063825-15063844	Msa0876690:intron	40.0%
	CAAGGACCTAACAATGGTAT+TGG	-	chr6_1:15064012-15064031	Msa0876690:intron	40.0%
	GTCTCTATTTGAGCACAAGT+TGG	+	chr6_1:15064055-15064074	None:intergenic	40.0%
	TGCATTCCATCCATCTGAAA+AGG	-	chr6_1:15064092-15064111	Msa0876690:intron	40.0%
!	TGTTTGCCTTTTCAGATGGA+TGG	+	chr6_1:15064101-15064120	None:intergenic	40.0%
!!	AGCTTGTTTGCCTTTTCAGA+TGG	+	chr6_1:15064105-15064124	None:intergenic	40.0%
	TTGTTGATGCATCCTTTGTG+TGG	-	chr6_1:15064436-15064455	Msa0876690:CDS	40.0%
	CAACCATCTCATAGACCAAC+TGG	-	chr6_1:15061474-15061493	Msa0876690:three_prime_UTR	45.0%
!	CTACCAGTTGGTCTATGAGA+TGG	+	chr6_1:15061480-15061499	None:intergenic	45.0%
	CCATTGGAGAATCTACCAGT+TGG	+	chr6_1:15061492-15061511	None:intergenic	45.0%
	CCAACTGGTAGATTCTCCAA+TGG	-	chr6_1:15061489-15061508	Msa0876690:three_prime_UTR	45.0%
	GGGCTTAAGTATGGCAATGT+TGG	+	chr6_1:15062174-15062193	None:intergenic	45.0%
	GCACTTGTTCTCATAACCGT+TGG	-	chr6_1:15062691-15062710	Msa0876690:intron	45.0%
	CTTGTTCTCATAACCGTTGG+TGG	-	chr6_1:15062694-15062713	Msa0876690:intron	45.0%
!!	ACTTGGTGCCTTATTCTGCA+AGG	-	chr6_1:15062740-15062759	Msa0876690:intron	45.0%
	TGACGAGACCTTGCAGAATA+AGG	+	chr6_1:15062751-15062770	None:intergenic	45.0%
	GCTAGAAGAGTTCTTGTGAC+AGG	-	chr6_1:15063446-15063465	Msa0876690:intron	45.0%
	AGAGTTCTTGTGACAGGAAC+AGG	-	chr6_1:15063452-15063471	Msa0876690:intron	45.0%
	CCACGTTGTGCAATTTCTGA+AGG	+	chr6_1:15063494-15063513	None:intergenic	45.0%
	CCTTCAGAAATTGCACAACG+TGG	-	chr6_1:15063491-15063510	Msa0876690:intron	45.0%
	GACTTAACAGGAAACTTGGC+AGG	-	chr6_1:15063591-15063610	Msa0876690:CDS	45.0%
!	AGCGTGATTACCGTATTGAC+CGG	+	chr6_1:15063672-15063691	None:intergenic	45.0%
	ACTCGGACCAGTGATATATC+CGG	-	chr6_1:15063819-15063838	Msa0876690:intron	45.0%
	GCCTTAACCGGATATATCAC+TGG	+	chr6_1:15063829-15063848	None:intergenic	45.0%
	GATATATCCGGTTAAGGCCT+AGG	-	chr6_1:15063831-15063850	Msa0876690:intron	45.0%
	TGTGGACAAGGACCTAACAA+TGG	-	chr6_1:15064006-15064025	Msa0876690:intron	45.0%
	CCAATGCAAACACTTGTGCT+TGG	+	chr6_1:15064249-15064268	None:intergenic	45.0%
	CCAAGCACAAGTGTTTGCAT+TGG	-	chr6_1:15064246-15064265	Msa0876690:intron	45.0%
!!!	TATTTATTTTAATTATGTAT+TGG	+	chr6_1:15062376-15062395	None:intergenic	5.0%
!	GGAGCCAATTTTGCTTCAGC+TGG	-	chr6_1:15062222-15062241	Msa0876690:CDS	50.0%
	TGTGACAGGAACAGGACCTA+TGG	-	chr6_1:15063460-15063479	Msa0876690:intron	50.0%
	GTGACAGGAACAGGACCTAT+GGG	-	chr6_1:15063461-15063480	Msa0876690:intron	50.0%
	TCTGAAGGAACACAGCCCAT+AGG	+	chr6_1:15063479-15063498	None:intergenic	50.0%
!	GCGTGATTACCGTATTGACC+GGG	+	chr6_1:15063671-15063690	None:intergenic	50.0%
	AGACCCGGTTAACAGTCTTG+CGG	+	chr6_1:15063897-15063916	None:intergenic	50.0%
	CCAGTGACCTAGGCCTTAAC+CGG	+	chr6_1:15063841-15063860	None:intergenic	55.0%
	CGGTTAAGGCCTAGGTCACT+GGG	-	chr6_1:15063839-15063858	Msa0876690:intron	55.0%
	GACCAATGACCCAGTGACCT+AGG	+	chr6_1:15063851-15063870	None:intergenic	55.0%
	TGGGTCATTGGTCAGACCAG+TGG	-	chr6_1:15063858-15063877	Msa0876690:intron	55.0%
	GGGTCATTGGTCAGACCAGT+GGG	-	chr6_1:15063859-15063878	Msa0876690:intron	55.0%
	TGGTCAGACCAGTGGGTCAA+TGG	-	chr6_1:15063866-15063885	Msa0876690:intron	55.0%
	CAGACCAGTGGGTCAATGGT+CGG	-	chr6_1:15063870-15063889	Msa0876690:intron	55.0%
	CGGACCGCAAGACTGTTAAC+CGG	-	chr6_1:15063890-15063909	Msa0876690:intron	55.0%
	GGACCGCAAGACTGTTAACC+GGG	-	chr6_1:15063891-15063910	Msa0876690:intron	55.0%
!	CGTGCTGATGCACCCCCTTA+TGG	-	chr6_1:15061441-15061460	Msa0876690:three_prime_UTR	60.0%
	CCGGTTAAGGCCTAGGTCAC+TGG	-	chr6_1:15063838-15063857	Msa0876690:intron	60.0%
	GGCCTAGGTCACTGGGTCAT+TGG	-	chr6_1:15063846-15063865	Msa0876690:intron	60.0%
	GGGTGCATCAGCACGTGCAG+TGG	+	chr6_1:15061436-15061455	None:intergenic	65.0%
	CGGTCCGACCATTGACCCAC+TGG	+	chr6_1:15063877-15063896	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_1	gene	15061238	15064603	15061238	ID=Msa0876690;Name=Msa0876690
chr6_1	mRNA	15061238	15064603	15061238	ID=Msa0876690-mRNA-1;Parent=Msa0876690;Name=Msa0876690-mRNA-1;_AED=0.10;_eAED=0.10;_QI=53\|1\|1\|1\|1\|1\|5\|391\|366
chr6_1	exon	15061238	15061861	15061238	ID=Msa0876690-mRNA-1:exon:4329;Parent=Msa0876690-mRNA-1
chr6_1	exon	15062161	15062413	15062161	ID=Msa0876690-mRNA-1:exon:4328;Parent=Msa0876690-mRNA-1
chr6_1	exon	15063013	15063255	15063013	ID=Msa0876690-mRNA-1:exon:4327;Parent=Msa0876690-mRNA-1
chr6_1	exon	15063563	15063690	15063563	ID=Msa0876690-mRNA-1:exon:4326;Parent=Msa0876690-mRNA-1
chr6_1	exon	15064307	15064603	15064307	ID=Msa0876690-mRNA-1:exon:4325;Parent=Msa0876690-mRNA-1
chr6_1	five_prime_UTR	15064551	15064603	15064551	ID=Msa0876690-mRNA-1:five_prime_utr;Parent=Msa0876690-mRNA-1
chr6_1	CDS	15064307	15064550	15064307	ID=Msa0876690-mRNA-1:cds;Parent=Msa0876690-mRNA-1
chr6_1	CDS	15063563	15063690	15063563	ID=Msa0876690-mRNA-1:cds;Parent=Msa0876690-mRNA-1
chr6_1	CDS	15063013	15063255	15063013	ID=Msa0876690-mRNA-1:cds;Parent=Msa0876690-mRNA-1
chr6_1	CDS	15062161	15062413	15062161	ID=Msa0876690-mRNA-1:cds;Parent=Msa0876690-mRNA-1
chr6_1	CDS	15061629	15061861	15061629	ID=Msa0876690-mRNA-1:cds;Parent=Msa0876690-mRNA-1
chr6_1	three_prime_UTR	15061238	15061628	15061238	ID=Msa0876690-mRNA-1:three_prime_utr;Parent=Msa0876690-mRNA-1

Gene Sequence

>Msa0876690

ATGGCATCTTTGTCAAGTTTTTTTGCTTTGTTCATTTTAGTTGTTGGAGGAATATTTTTTCATGGGATTGAAGCTACTCCAAGAACATTCTTAGTGTTTGGAGATTCACTTGTTGATAATGGAAATAACAATTACTTGGCTACCACTGCACGTGCTGATGCACCCCCTTATGGTATTGATTATCAACCATCTCATAGACCAACTGGTAGATTCTCCAATGGCTACAATATTCCTGATTTTATCAGTCAGAAACTTGGTGCTGAGCCAACATTGCCATACTTAAGCCCTGAATTAAGAGGAGAAAAGCTTCTAGTTGGAGCCAATTTTGCTTCAGCTGGAATTGGAATACTCAATGACACTGGGATTCAATTTATAAATATCATAAGAATGTATAGACAATATGAGTATTTTCAAGAGTACCAAAGTAGGTTAAGTGCTCTTATTGGTGCATCACAAGCAAAGACTCGTGTGAATCAAGCACTTGTTCTCATAACCGTTGGTGGCAATGATTTTGTGAATAACTACTACTTGGTGCCTTATTCTGCAAGGTCTCGTCAATATCAATTACCTGAATATGTCAAGTATCTTATCTCTGAGTACCAAAAACTTTTGCAGAAACTATATGATTTGGGAGCTAGAAGAGTTCTTGTGACAGGAACAGGACCTATGGGCTGTGTTCCTTCAGAAATTGCACAACGTGGTAGAAATGGACAATGTTCAACTGAACTACAAAGAGCTGCATCATTGTTTAACCCTCAACTTGAAAACATGCTTCTAGGACTTAACAGGAAACTTGGCAGGGATGTTTTCATTGCTGCAAACACTGGGAAAACACATCTTAACTTTATTAATAATCCCGGTCAATACGGTTTCAAAACATCTAAAATAGCTTGTTGTGGACAAGGACCTAACAATGGTATTGGATTATGCACACAACTTTCCAACTTGTGCTCAAATAGAGACGTGTATGCATTTTGGGATGCATTCCATCCATCTGAAAAGGCAAACAAGCTTATTGTGAATGATATTATGTCTGGCTCTAAGGCTTACATGAATCCAATGAATCTTAGCACTATCTTAGCATTGGATGCTACCACATGA

Protein sequence

>Msa0876690

MASLSSFFALFILVVGGIFFHGIEATPRTFLVFGDSLVDNGNNNYLATTARADAPPYGIDYQPSHRPTGRFSNGYNIPDFISQKLGAEPTLPYLSPELRGEKLLVGANFASAGIGILNDTGIQFINIIRMYRQYEYFQEYQSRLSALIGASQAKTRVNQALVLITVGGNDFVNNYYLVPYSARSRQYQLPEYVKYLISEYQKLLQKLYDLGARRVLVTGTGPMGCVPSEIAQRGRNGQCSTELQRAASLFNPQLENMLLGLNRKLGRDVFIAANTGKTHLNFINNPGQYGFKTSKIACCGQGPNNGIGLCTQLSNLCSNRDVYAFWDAFHPSEKANKLIVNDIMSGSKAYMNPMNLSTILALDATT*