AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0887280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0887280 MtrunA17_Chr6g0466901 95.777 521 22 0 1 521 1 521 0.0 1042
Msa0887280 MtrunA17_Chr6g0466941 89.847 522 52 1 1 521 1 522 0.0 983
Msa0887280 MtrunA17_Chr6g0451641 62.115 520 188 6 5 521 8 521 0.0 680
Msa0887280 MtrunA17_Chr6g0451741 59.465 523 203 5 6 521 30 550 0.0 656
Msa0887280 MtrunA17_Chr6g0451751 58.157 521 209 5 6 521 12 528 0.0 637
Msa0887280 MtrunA17_Chr6g0451691 57.443 524 214 5 6 521 10 532 0.0 633
Msa0887280 MtrunA17_Chr3g0082701 57.414 526 216 5 2 521 6 529 0.0 630
Msa0887280 MtrunA17_Chr4g0008101 56.900 529 219 4 1 521 1 528 0.0 630
Msa0887280 MtrunA17_Chr6g0451781 56.214 523 226 3 1 521 40 561 0.0 615
Msa0887280 MtrunA17_Chr4g0046631 49.900 499 236 5 25 521 37 523 6.35e-179 513
Msa0887280 MtrunA17_Chr2g0304871 48.633 512 254 6 7 516 10 514 3.58e-178 511
Msa0887280 MtrunA17_Chr6g0451681 49.031 516 196 6 6 521 33 481 6.80e-171 491
Msa0887280 MtrunA17_Chr8g0339311 45.400 500 262 7 24 521 37 527 3.11e-151 443
Msa0887280 MtrunA17_Chr6g0458561 42.771 498 269 7 28 521 47 532 2.25e-135 402
Msa0887280 MtrunA17_Chr8g0339331 43.173 498 272 5 26 521 31 519 5.99e-134 398
Msa0887280 MtrunA17_Chr6g0451801 49.530 319 157 4 1 315 5 323 2.42e-113 338
Msa0887280 MtrunA17_Chr4g0053621 37.030 505 298 7 12 515 9 494 1.39e-109 335
Msa0887280 MtrunA17_Chr5g0401681 36.328 512 299 8 7 515 3 490 5.78e-103 318
Msa0887280 MtrunA17_Chr5g0402971 50.680 294 137 3 24 314 27 315 1.01e-101 308
Msa0887280 MtrunA17_Chr6g0451811 68.932 206 63 1 316 521 5 209 9.46e-100 299
Msa0887280 MtrunA17_Chr6g0451771 68.116 207 65 1 315 521 21 226 8.06e-99 298
Msa0887280 MtrunA17_Chr3g0086691 35.670 485 293 7 43 521 41 512 2.94e-95 298
Msa0887280 MtrunA17_Chr5g0401691 34.549 521 303 11 1 515 19 507 9.77e-95 297
Msa0887280 MtrunA17_Chr3g0086661 36.701 485 288 7 43 521 41 512 1.04e-94 297
Msa0887280 MtrunA17_Chr4g0039391 35.789 475 282 10 44 515 45 499 1.13e-94 297
Msa0887280 MtrunA17_Chr8g0344151 33.849 517 318 10 10 521 13 510 1.64e-94 296
Msa0887280 MtrunA17_Chr3g0086651 36.082 485 291 7 43 521 41 512 8.16e-94 295
Msa0887280 MtrunA17_Chr8g0344181 34.756 492 298 9 35 521 39 512 8.37e-93 292
Msa0887280 MtrunA17_Chr4g0058231 35.108 507 300 11 12 508 4 491 5.71e-92 290
Msa0887280 MtrunA17_Chr4g0052861 33.202 509 299 9 15 515 15 490 1.11e-91 289
Msa0887280 MtrunA17_Chr4g0061381 34.497 487 294 8 43 521 40 509 4.34e-91 288
Msa0887280 MtrunA17_Chr1g0156101 36.052 466 276 11 26 483 25 476 1.27e-90 286
Msa0887280 MtrunA17_Chr7g0235551 34.034 523 319 9 5 518 5 510 3.92e-90 285
Msa0887280 MtrunA17_Chr3g0094171 34.170 518 309 13 15 521 17 513 1.22e-88 281
Msa0887280 MtrunA17_Chr6g0451761 45.425 306 132 6 2 303 6 280 4.99e-87 269
Msa0887280 MtrunA17_Chr4g0058191 33.661 508 308 12 12 514 4 487 1.03e-86 276
Msa0887280 MtrunA17_Chr4g0052881 32.681 511 316 8 10 515 4 491 1.14e-86 276
Msa0887280 MtrunA17_Chr8g0344191 32.302 517 324 11 13 521 46 544 2.02e-86 276
Msa0887280 MtrunA17_Chr7g0254641 32.869 502 315 11 27 521 34 520 4.91e-86 275
Msa0887280 MtrunA17_Chr3g0094231 33.603 494 308 9 29 521 31 505 1.39e-85 273
Msa0887280 MtrunA17_Chr4g0046671 44.523 283 146 3 34 314 44 317 1.47e-85 267
Msa0887280 MtrunA17_Chr6g0484841 33.686 472 277 11 22 483 24 469 3.22e-85 272
Msa0887280 MtrunA17_Chr5g0430131 34.949 495 281 12 1 482 1 467 1.78e-84 270
Msa0887280 MtrunA17_Chr4g0011961 33.136 507 314 10 12 513 7 493 2.42e-84 270
Msa0887280 MtrunA17_Chr6g0472311 33.922 510 302 13 12 505 14 504 9.44e-84 269
Msa0887280 MtrunA17_Chr4g0011901 34.483 464 282 10 22 483 18 461 1.18e-83 268
Msa0887280 MtrunA17_Chr3g0116681 32.290 511 310 11 15 514 17 502 2.11e-83 268
Msa0887280 MtrunA17_Chr2g0296661 35.294 459 277 8 57 513 53 493 8.97e-83 266
Msa0887280 MtrunA17_Chr4g0030701 33.628 452 277 9 40 483 41 477 1.67e-82 266
Msa0887280 MtrunA17_Chr2g0310381 34.310 478 287 10 12 483 2 458 5.00e-82 263
Msa0887280 MtrunA17_Chr6g0484811 33.333 519 309 14 12 516 11 506 5.37e-82 264
Msa0887280 MtrunA17_Chr5g0430101 35.031 491 284 12 1 482 1 465 1.01e-81 263
Msa0887280 MtrunA17_Chr7g0258221 33.074 514 318 11 10 517 13 506 2.05e-81 262
Msa0887280 MtrunA17_Chr1g0174471 32.941 510 321 9 12 517 30 522 2.50e-81 263
Msa0887280 MtrunA17_Chr5g0419691 35.043 468 268 11 25 483 21 461 2.63e-81 262
Msa0887280 MtrunA17_Chr1g0156081 35.776 464 277 10 28 483 50 500 1.60e-80 261
Msa0887280 MtrunA17_Chr2g0296651 31.631 509 324 7 8 515 5 490 1.73e-80 259
Msa0887280 MtrunA17_Chr2g0310391 33.966 474 288 10 15 484 7 459 1.77e-80 259
Msa0887280 MtrunA17_Chr4g0011981 34.077 493 289 10 32 513 27 494 2.18e-80 259
Msa0887280 MtrunA17_Chr4g0052851 33.333 483 287 9 34 515 34 482 5.58e-80 258
Msa0887280 MtrunA17_Chr8g0390881 33.264 481 288 13 12 482 11 468 6.49e-80 258
Msa0887280 MtrunA17_Chr4g0046691 41.869 289 150 3 26 314 31 301 9.55e-80 251
Msa0887280 MtrunA17_Chr4g0058201 32.193 497 309 11 24 514 18 492 1.52e-79 257
Msa0887280 MtrunA17_Chr5g0445461 31.828 487 298 11 3 483 7 465 2.33e-79 257
Msa0887280 MtrunA17_Chr5g0445441 32.854 487 293 12 3 483 48 506 2.61e-79 258
Msa0887280 MtrunA17_Chr5g0430081 34.151 489 289 12 3 482 2 466 6.75e-79 256
Msa0887280 MtrunA17_Chr4g0011921 32.885 520 305 12 12 513 1 494 1.65e-78 254
Msa0887280 MtrunA17_Chr3g0101631 33.264 481 273 13 16 483 16 461 2.14e-78 254
Msa0887280 MtrunA17_Chr7g0218601 33.474 475 281 11 17 483 17 464 3.55e-78 254
Msa0887280 MtrunA17_Chr5g0430031 33.605 491 277 15 13 482 6 468 3.82e-78 254
Msa0887280 MtrunA17_Chr8g0372251 35.065 462 259 13 34 482 36 469 4.04e-78 254
Msa0887280 MtrunA17_Chr4g0057001 33.008 512 317 10 14 521 31 520 5.06e-78 254
Msa0887280 MtrunA17_Chr7g0255531 31.467 518 331 13 7 521 6 502 8.71e-78 253
Msa0887280 MtrunA17_Chr4g0035921 30.337 534 332 14 1 517 5 515 1.08e-77 253
Msa0887280 MtrunA17_Chr4g0011881 33.047 466 291 9 20 483 15 461 1.37e-77 252
Msa0887280 MtrunA17_Chr4g0046661 55.204 221 98 1 301 521 10 229 1.47e-77 243
Msa0887280 MtrunA17_Chr3g0101721 32.321 461 286 10 27 483 30 468 1.85e-77 252
Msa0887280 MtrunA17_Chr5g0403351 31.928 498 299 11 17 498 13 486 1.85e-77 252
Msa0887280 MtrunA17_Chr4g0030711 29.960 494 314 8 45 521 48 526 1.88e-77 253
Msa0887280 MtrunA17_Chr4g0046681 55.665 203 89 1 315 517 30 231 2.71e-77 243
Msa0887280 MtrunA17_Chr7g0218611 33.909 463 273 10 29 483 28 465 3.03e-77 251
Msa0887280 MtrunA17_Chr1g0174451 30.980 510 331 8 12 517 15 507 3.77e-77 251
Msa0887280 MtrunA17_Chr1g0174481 31.755 507 324 8 12 516 14 500 7.07e-77 250
Msa0887280 MtrunA17_Chr3g0101731 32.323 495 302 12 13 495 8 481 1.27e-76 250
Msa0887280 MtrunA17_Chr3g0084921 31.976 491 310 10 1 483 2 476 1.72e-76 249
Msa0887280 MtrunA17_Chr4g0011871 33.619 467 275 11 26 483 22 462 3.10e-76 248
Msa0887280 MtrunA17_Chr1g0207841 31.504 492 301 11 45 518 49 522 3.34e-76 249
Msa0887280 MtrunA17_Chr7g0224551 31.470 483 294 10 12 483 11 467 3.68e-76 249
Msa0887280 MtrunA17_Chr3g0101621 31.373 510 298 12 16 507 13 488 6.36e-76 248
Msa0887280 MtrunA17_Chr5g0430091 33.333 492 294 13 1 482 1 468 9.12e-76 248
Msa0887280 MtrunA17_Chr3g0101611 30.938 501 312 10 27 516 32 509 9.84e-76 248
Msa0887280 MtrunA17_Chr1g0174441 32.129 498 313 9 27 516 47 527 1.23e-75 248
Msa0887280 MtrunA17_Chr4g0047661 32.558 473 292 11 17 483 31 482 1.80e-75 247
Msa0887280 MtrunA17_Chr5g0395331 35.569 492 284 17 18 499 20 488 2.13e-75 246
Msa0887280 MtrunA17_Chr3g0116741 30.924 498 317 9 16 508 34 509 4.14e-75 246
Msa0887280 MtrunA17_Chr1g0174461 32.427 515 317 12 12 517 14 506 4.19e-75 246
Msa0887280 MtrunA17_Chr3g0101601 32.135 473 288 11 17 483 17 462 5.89e-75 245
Msa0887280 MtrunA17_Chr5g0445451 31.873 502 305 13 3 495 7 480 6.76e-75 245
Msa0887280 MtrunA17_Chr5g0431641 30.977 481 295 13 12 483 13 465 1.05e-74 244
Msa0887280 MtrunA17_Chr4g0020041 31.056 483 297 12 12 483 10 467 1.21e-74 244
Msa0887280 MtrunA17_Chr4g0047631 32.129 498 308 13 17 508 32 505 1.25e-74 245
Msa0887280 MtrunA17_Chr7g0224561 31.263 483 295 10 12 483 11 467 1.35e-74 245
Msa0887280 MtrunA17_Chr7g0265611 31.890 508 320 11 16 516 28 516 2.42e-74 244
Msa0887280 MtrunA17_Chr5g0406651 33.049 469 293 8 18 483 12 462 3.42e-74 243
Msa0887280 MtrunA17_Chr4g0017411 31.474 502 305 10 17 515 14 479 8.08e-74 242
Msa0887280 MtrunA17_Chr4g0047641 31.076 502 317 10 16 508 28 509 1.16e-73 242
Msa0887280 MtrunA17_Chr4g0058281 31.189 513 310 12 12 510 26 509 2.68e-73 241
Msa0887280 MtrunA17_Chr7g0258211 31.545 466 280 10 43 494 48 488 3.28e-73 241
Msa0887280 MtrunA17_Chr8g0361471 30.346 491 302 13 8 483 1 466 5.11e-73 240
Msa0887280 MtrunA17_Chr4g0024771 29.116 498 324 8 3 495 7 480 9.65e-73 239
Msa0887280 MtrunA17_Chr8g0382901 32.851 484 298 10 1 483 462 919 1.08e-72 248
Msa0887280 MtrunA17_Chr8g0382901 32.773 476 279 10 8 483 6 440 2.37e-70 242
Msa0887280 MtrunA17_Chr3g0101761 32.323 495 302 10 13 495 8 481 1.81e-72 239
Msa0887280 MtrunA17_Chr5g0403331 32.353 476 290 10 18 482 14 468 2.50e-72 238
Msa0887280 MtrunA17_Chr1g0162811 30.480 479 301 11 13 483 11 465 2.68e-72 238
Msa0887280 MtrunA17_Chr5g0405001 30.902 521 319 14 12 516 19 514 3.15e-72 238
Msa0887280 MtrunA17_Chr5g0445381 30.857 525 328 13 1 515 32 531 3.27e-72 239
Msa0887280 MtrunA17_Chr3g0101711 31.423 471 293 11 42 504 45 493 5.55e-72 238
Msa0887280 MtrunA17_Chr4g0056951 32.278 474 305 7 49 521 57 515 2.35e-71 236
Msa0887280 MtrunA17_Chr3g0101581 29.897 485 316 9 2 483 4 467 2.70e-71 236
Msa0887280 MtrunA17_Chr5g0431671 30.482 456 283 12 34 483 39 466 3.27e-71 235
Msa0887280 MtrunA17_Chr3g0101831 31.452 496 306 10 13 495 8 482 4.23e-71 235
Msa0887280 MtrunA17_Chr3g0101651 31.250 480 297 12 34 504 39 494 4.33e-71 235
Msa0887280 MtrunA17_Chr5g0431501 30.952 504 293 13 34 516 34 503 6.75e-71 234
Msa0887280 MtrunA17_Chr5g0431461 30.952 504 293 13 34 516 34 503 6.75e-71 234
Msa0887280 MtrunA17_Chr5g0395321 33.855 511 287 20 18 512 25 500 8.43e-71 235
Msa0887280 MtrunA17_Chr5g0402981 56.345 197 84 2 326 521 2 197 2.67e-70 223
Msa0887280 MtrunA17_Chr5g0403321 31.743 482 297 12 23 494 24 483 3.25e-70 233
Msa0887280 MtrunA17_Chr3g0101671 29.691 485 302 12 13 483 11 470 3.80e-70 233
Msa0887280 MtrunA17_Chr8g0362701 32.008 478 303 11 45 517 46 506 4.06e-70 233
Msa0887280 MtrunA17_Chr3g0101811 30.980 510 304 12 13 495 8 496 4.63e-70 233
Msa0887280 MtrunA17_Chr3g0101821 31.313 495 307 11 13 495 8 481 7.76e-70 232
Msa0887280 MtrunA17_Chr8g0362481 32.812 448 281 10 75 517 5 437 1.13e-69 229
Msa0887280 MtrunA17_Chr4g0047691 31.799 478 289 13 16 483 30 480 2.43e-69 231
Msa0887280 MtrunA17_Chr5g0431511 31.440 493 305 13 34 516 34 503 3.44e-69 230
Msa0887280 MtrunA17_Chr6g0466331 29.388 490 308 12 8 483 1 466 5.20e-69 230
Msa0887280 MtrunA17_Chr3g0101661 29.923 518 324 13 1 504 1 493 6.53e-69 230
Msa0887280 MtrunA17_Chr6g0465511 29.388 490 308 12 8 483 1 466 1.05e-68 229
Msa0887280 MtrunA17_Chr5g0445421 30.339 501 293 13 3 495 81 533 1.07e-68 230
Msa0887280 MtrunA17_Chr5g0446161 31.911 492 296 15 31 514 39 499 6.17e-68 227
Msa0887280 MtrunA17_Chr3g0101691 28.681 523 331 14 5 508 4 503 6.93e-68 227
Msa0887280 MtrunA17_Chr5g0395381 32.745 510 263 19 10 499 7 456 8.29e-68 226
Msa0887280 MtrunA17_Chr5g0430111 34.305 446 261 12 1 436 1 424 1.06e-67 224
Msa0887280 MtrunA17_Chr1g0162801 30.705 482 301 12 12 483 10 468 1.12e-67 226
Msa0887280 MtrunA17_Chr3g0101801 31.098 492 310 11 12 495 18 488 1.21e-67 226
Msa0887280 MtrunA17_Chr4g0046321 30.538 465 282 11 34 484 35 472 1.98e-67 226
Msa0887280 MtrunA17_Chr3g0101751 32.174 460 285 9 42 495 50 488 2.94e-67 225
Msa0887280 MtrunA17_Chr1g0164211 32.990 485 300 12 30 511 28 490 3.47e-67 224
Msa0887280 MtrunA17_Chr3g0101571 28.958 480 310 10 12 483 8 464 6.87e-67 224
Msa0887280 MtrunA17_Chr6g0463791 31.809 503 305 15 12 501 8 485 9.09e-67 224
Msa0887280 MtrunA17_Chr7g0246221 31.837 490 301 12 14 494 15 480 1.05e-66 224
Msa0887280 MtrunA17_Chr5g0445531 29.360 453 290 9 34 483 39 464 1.21e-66 223
Msa0887280 MtrunA17_Chr8g0357421 31.933 476 293 9 27 495 30 481 2.72e-66 223
Msa0887280 MtrunA17_Chr4g0046331 29.175 497 300 12 13 484 5 474 3.53e-66 223
Msa0887280 MtrunA17_Chr1g0167321 32.056 496 301 14 13 495 8 480 4.15e-66 222
Msa0887280 MtrunA17_Chr8g0356001 31.440 493 306 14 1 483 1 471 4.33e-66 222
Msa0887280 MtrunA17_Chr5g0446151 30.876 502 310 15 22 514 27 500 7.44e-66 221
Msa0887280 MtrunA17_Chr1g0200961 32.417 509 311 10 12 511 9 493 1.07e-65 221
Msa0887280 MtrunA17_Chr1g0160851 28.745 494 327 11 3 494 4 474 1.26e-65 221
Msa0887280 MtrunA17_Chr4g0046351 29.892 465 285 11 34 484 35 472 1.27e-65 221
Msa0887280 MtrunA17_Chr7g0246121 31.660 518 327 11 1 512 1 497 1.99e-65 220
Msa0887280 MtrunA17_Chr8g0346261 32.359 479 298 12 40 515 90 545 3.60e-65 221
Msa0887280 MtrunA17_Chr3g0101701 29.237 472 302 12 42 504 46 494 1.17e-64 218
Msa0887280 MtrunA17_Chr8g0357431 33.122 474 291 10 27 495 30 482 1.13e-63 216
Msa0887280 MtrunA17_Chr1g0205371 29.845 516 335 12 1 511 1 494 1.51e-63 215
Msa0887280 MtrunA17_Chr4g0076161 31.417 487 291 15 12 482 8 467 1.84e-63 215
Msa0887280 MtrunA17_Chr8g0355961 30.894 492 310 13 1 483 1 471 2.75e-63 214
Msa0887280 MtrunA17_Chr7g0246131 32.460 496 303 13 8 494 9 481 6.05e-63 214
Msa0887280 MtrunA17_Chr4g0046701 54.938 162 73 0 360 521 2 163 6.08e-63 203
Msa0887280 MtrunA17_Chr4g0058261 29.124 491 316 12 29 510 61 528 7.52e-63 214
Msa0887280 MtrunA17_Chr6g0463801 30.998 471 291 13 34 498 38 480 9.84e-63 213
Msa0887280 MtrunA17_Chr8g0351801 30.021 483 305 10 44 508 44 511 1.09e-62 213
Msa0887280 MtrunA17_Chr1g0205361 30.019 523 330 16 1 514 1 496 1.22e-62 213
Msa0887280 MtrunA17_Chr1g0213671 30.830 506 318 14 21 514 21 506 2.33e-61 210
Msa0887280 MtrunA17_Chr3g0101741 30.993 413 256 10 73 483 3 388 2.74e-60 204
Msa0887280 MtrunA17_Chr1g0174431 49.524 210 97 4 316 518 1 208 1.12e-59 196
Msa0887280 MtrunA17_Chr8g0370651 27.831 521 356 13 12 521 17 528 4.02e-59 204
Msa0887280 MtrunA17_Chr5g0419451 30.505 495 306 16 26 514 54 516 4.33e-59 204
Msa0887280 MtrunA17_Chr2g0314731 29.289 478 316 10 7 483 6 462 5.09e-59 202
Msa0887280 MtrunA17_Chr8g0370641 27.652 528 360 13 8 521 5 524 5.27e-59 204
Msa0887280 MtrunA17_Chr4g0039901 31.172 478 296 13 42 511 43 495 2.47e-58 201
Msa0887280 MtrunA17_Chr3g0107611 27.885 520 359 11 12 521 24 537 1.09e-57 200
Msa0887280 MtrunA17_Chr7g0246151 30.385 441 290 9 57 495 55 480 4.93e-57 198
Msa0887280 MtrunA17_Chr1g0176831 29.498 478 315 11 7 483 36 492 1.55e-56 197
Msa0887280 MtrunA17_Chr2g0314721 28.986 483 322 9 1 483 12 473 4.73e-56 195
Msa0887280 MtrunA17_Chr1g0200951 29.622 503 321 17 24 516 50 529 9.57e-55 192
Msa0887280 MtrunA17_Chr5g0430071 37.793 299 165 8 191 483 39 322 1.24e-54 187
Msa0887280 MtrunA17_Chr2g0280261 29.752 484 294 12 26 497 27 476 1.63e-54 191
Msa0887280 MtrunA17_Chr1g0197881 31.028 506 302 18 1 494 1 471 1.94e-54 191
Msa0887280 MtrunA17_Chr1g0197851 31.164 507 301 19 1 494 1 472 5.60e-54 189
Msa0887280 MtrunA17_Chr1g0197891 30.495 505 307 17 1 494 1 472 1.05e-52 186
Msa0887280 MtrunA17_Chr1g0197871 30.237 506 302 20 4 494 3 472 1.81e-52 185
Msa0887280 MtrunA17_Chr7g0246181 30.266 489 313 10 1 483 1 467 2.49e-51 182
Msa0887280 MtrunA17_Chr8g0377341 29.630 486 303 16 40 517 73 527 3.49e-51 182
Msa0887280 MtrunA17_Chr1g0198191 27.011 522 339 17 12 515 18 515 9.59e-51 181
Msa0887280 MtrunA17_Chr5g0432751 29.011 455 299 9 34 485 39 472 3.83e-50 179
Msa0887280 MtrunA17_Chr3g0107541 28.131 487 328 12 43 521 59 531 8.87e-50 179
Msa0887280 MtrunA17_Chr1g0210091 27.129 505 327 13 7 495 36 515 5.50e-48 174
Msa0887280 MtrunA17_Chr4g0011851 45.556 180 93 3 305 483 5 180 6.17e-48 165
Msa0887280 MtrunA17_Chr4g0011941 47.024 168 86 2 316 483 1 165 8.43e-48 164
Msa0887280 MtrunA17_Chr4g0058211 41.500 200 113 3 316 514 19 215 1.98e-47 164
Msa0887280 MtrunA17_Chr1g0160861 34.182 275 168 7 223 494 51 315 9.93e-46 163
Msa0887280 MtrunA17_Chr5g0431591 30.464 302 190 8 219 508 23 316 1.09e-45 162
Msa0887280 MtrunA17_Chr1g0156061 40.984 244 138 5 242 483 193 432 1.21e-45 166
Msa0887280 MtrunA17_Chr1g0156061 33.987 153 91 3 42 188 63 211 4.16e-20 93.2
Msa0887280 MtrunA17_Chr2g0334021 27.944 501 316 16 28 515 30 498 4.35e-43 160
Msa0887280 MtrunA17_Chr4g0074581 26.204 519 344 18 16 515 44 542 1.41e-41 156
Msa0887280 MtrunA17_Chr3g0086681 46.988 166 83 2 361 521 9 174 8.34e-40 142
Msa0887280 MtrunA17_Chr2g0310351 39.881 168 98 2 316 483 1 165 1.72e-39 142
Msa0887280 MtrunA17_Chr5g0409051 23.992 521 362 13 13 517 8 510 2.30e-39 150
Msa0887280 MtrunA17_Chr5g0446101 29.518 332 209 9 188 514 1 312 8.69e-39 144
Msa0887280 MtrunA17_Chr8g0390871 40.678 177 100 4 307 482 18 190 1.13e-38 141
Msa0887280 MtrunA17_Chr2g0314781 42.953 149 82 2 335 483 4 149 5.44e-38 137
Msa0887280 MtrunA17_Chr8g0364651 25.388 516 350 13 12 516 8 499 1.33e-36 142
Msa0887280 MtrunA17_Chr5g0413911 26.602 515 345 11 19 516 31 529 2.55e-36 141
Msa0887280 MtrunA17_Chr6g0463621 41.935 186 99 6 316 495 1 183 2.01e-35 131
Msa0887280 MtrunA17_Chr2g0280081 25.862 464 323 8 59 516 557 1005 2.79e-35 140
Msa0887280 MtrunA17_Chr2g0280081 24.276 449 319 8 59 501 56 489 1.94e-29 123
Msa0887280 MtrunA17_Chr2g0280121 25.105 474 336 7 49 516 50 510 5.13e-35 137
Msa0887280 MtrunA17_Chr5g0445761 42.515 167 93 2 316 482 1 164 4.13e-34 127
Msa0887280 MtrunA17_Chr2g0280071 25.104 482 337 10 42 515 71 536 4.55e-34 136
Msa0887280 MtrunA17_Chr1g0174421 29.021 286 189 6 8 293 22 293 3.15e-32 126
Msa0887280 MtrunA17_Chr3g0101591 34.759 187 119 2 319 505 42 225 7.35e-32 122
Msa0887280 MtrunA17_Chr5g0423621 37.705 183 106 4 332 511 1 178 1.80e-31 120
Msa0887280 MtrunA17_Chr2g0280011 35.468 203 125 3 319 516 11 212 4.03e-31 120
Msa0887280 MtrunA17_Chr5g0445351 40.000 145 82 2 360 501 67 209 6.41e-31 119
Msa0887280 MtrunA17_Chr5g0445371 30.545 275 147 7 252 521 1 236 1.61e-30 119
Msa0887280 MtrunA17_Chr6g0477081 35.437 206 116 3 223 428 54 242 1.83e-30 119
Msa0887280 MtrunA17_Chr8g0387101 25.786 477 325 15 50 516 50 507 2.38e-30 124
Msa0887280 MtrunA17_Chr5g0430041 40.845 142 80 3 342 482 1 139 3.76e-30 116
Msa0887280 MtrunA17_Chr2g0280061 34.483 203 127 3 319 516 11 212 1.83e-29 115
Msa0887280 MtrunA17_Chr4g0011861 27.985 268 177 6 26 292 22 274 2.11e-29 117
Msa0887280 MtrunA17_Chr2g0280041 23.800 521 375 8 3 516 31 536 2.81e-29 121
Msa0887280 MtrunA17_Chr5g0444981 40.761 184 101 5 335 517 30 206 1.60e-28 112
Msa0887280 MtrunA17_Chr5g0430151 41.727 139 77 3 345 482 4 139 1.76e-28 111
Msa0887280 MtrunA17_Chr3g0117301 40.517 116 67 1 368 483 1 114 1.34e-27 107
Msa0887280 MtrunA17_Chr4g0030741 25.581 344 227 8 1 339 30 349 2.62e-27 112
Msa0887280 MtrunA17_Chr1g0151221 25.048 519 328 16 1 482 1 495 9.13e-27 114
Msa0887280 MtrunA17_Chr4g0011931 26.207 290 190 7 12 293 1 274 1.06e-26 109
Msa0887280 MtrunA17_Chr3g0101541 40.146 137 77 2 365 498 1 135 1.41e-26 104
Msa0887280 MtrunA17_Chr3g0116731 40.426 141 70 3 370 510 3 129 3.65e-26 103
Msa0887280 MtrunA17_Chr0c19g0493771 25.106 470 304 20 67 519 218 656 8.22e-26 111
Msa0887280 MtrunA17_Chr5g0445471 47.312 93 48 1 148 239 3 95 1.41e-25 100
Msa0887280 MtrunA17_Chr3g0107551 30.876 217 134 5 313 521 2 210 6.48e-25 102
Msa0887280 MtrunA17_Chr5g0396521 25.260 289 182 7 238 496 269 553 8.85e-25 108
Msa0887280 MtrunA17_Chr8g0364631 26.638 473 293 16 66 515 65 506 1.01e-24 107
Msa0887280 MtrunA17_Chr6g0449331 24.649 499 334 18 7 484 9 486 2.07e-24 106
Msa0887280 MtrunA17_Chr3g0135841 23.002 513 334 18 8 482 14 503 2.10e-24 106
Msa0887280 MtrunA17_Chr4g0046651 43.810 105 51 2 118 219 1 100 2.35e-24 98.2
Msa0887280 MtrunA17_Chr3g0105761 31.905 210 131 6 317 521 1 203 2.61e-24 100
Msa0887280 MtrunA17_Chr2g0293411 25.833 480 291 23 22 484 28 459 9.23e-24 104
Msa0887280 MtrunA17_Chr5g0430171 29.555 247 152 6 1 243 1 229 5.17e-23 97.8
Msa0887280 MtrunA17_Chr1g0163451 23.440 529 332 20 1 492 11 503 1.06e-22 101
Msa0887280 MtrunA17_Chr5g0445361 42.593 108 57 2 391 495 12 117 1.85e-22 93.2
Msa0887280 MtrunA17_Chr4g0038271 24.023 512 341 15 5 493 54 540 5.80e-22 99.4
Msa0887280 MtrunA17_Chr8g0351391 24.222 450 282 15 57 482 65 479 6.59e-22 99.0
Msa0887280 MtrunA17_Chr4g0028321 37.405 131 78 3 390 517 30 159 1.61e-21 91.7
Msa0887280 MtrunA17_Chr6g0449341 22.555 501 346 15 7 484 53 534 2.58e-21 97.4
Msa0887280 MtrunA17_Chr1g0163421 22.461 512 338 17 9 492 39 519 2.68e-21 97.4
Msa0887280 MtrunA17_Chr4g0030761 37.931 116 53 3 370 483 3 101 7.29e-21 89.4
Msa0887280 MtrunA17_Chr6g0463611 25.784 287 180 11 14 292 26 287 8.97e-21 93.6
Msa0887280 MtrunA17_Chr3g0105751 27.797 295 198 7 12 299 21 307 9.90e-21 94.4
Msa0887280 MtrunA17_Chr1g0164321 28.986 276 172 9 225 484 251 518 1.55e-20 95.1
Msa0887280 MtrunA17_Chr1g0207851 25.000 256 170 7 45 292 49 290 2.68e-20 92.4
Msa0887280 MtrunA17_Chr2g0293421 30.568 229 140 7 257 482 242 454 2.73e-20 94.0
Msa0887280 MtrunA17_Chr8g0351401 27.103 428 228 18 109 495 106 490 3.27e-20 94.0
Msa0887280 MtrunA17_Chr8g0381571 31.776 214 125 9 283 491 266 463 5.37e-20 92.8
Msa0887280 MtrunA17_Chr4g0004481 26.506 249 167 7 241 484 226 463 1.02e-19 92.0
Msa0887280 MtrunA17_Chr8g0381541 31.707 205 120 8 283 482 266 455 1.26e-19 92.0
Msa0887280 MtrunA17_Chr4g0076171 36.559 186 82 8 335 507 4 166 2.22e-19 85.5
Msa0887280 MtrunA17_Chr3g0107561 24.920 313 213 7 1 299 1 305 2.75e-19 89.4
Msa0887280 MtrunA17_Chr3g0128461 24.594 431 275 17 66 482 99 493 2.84e-19 90.9
Msa0887280 MtrunA17_Chr4g0063221 24.528 424 279 16 67 480 94 486 3.79e-19 90.5
Msa0887280 MtrunA17_Chr5g0445411 32.911 158 102 2 10 163 17 174 5.97e-19 84.7
Msa0887280 MtrunA17_Chr5g0445751 24.611 321 186 10 21 325 32 312 6.18e-19 87.8
Msa0887280 MtrunA17_Chr7g0227281 22.244 499 336 17 12 492 9 473 1.38e-18 88.6
Msa0887280 MtrunA17_Chr1g0163281 25.391 256 181 7 241 492 249 498 1.48e-18 88.6
Msa0887280 MtrunA17_Chr5g0429651 26.897 290 173 10 245 515 239 508 1.88e-18 88.2
Msa0887280 MtrunA17_Chr8g0372591 34.959 123 79 1 314 436 1 122 2.27e-18 82.0
Msa0887280 MtrunA17_Chr8g0351311 23.991 446 289 16 57 482 65 480 4.06e-18 87.4
Msa0887280 MtrunA17_Chr5g0400411 22.407 540 332 18 1 506 4 490 8.32e-18 86.3
Msa0887280 MtrunA17_Chr7g0260831 28.807 243 156 6 247 485 243 472 9.94e-18 85.9
Msa0887280 MtrunA17_Chr1g0179811 29.319 191 131 2 314 502 342 530 2.49e-17 85.1
Msa0887280 MtrunA17_Chr4g0026941 22.911 371 258 10 125 484 156 509 3.10e-17 84.7
Msa0887280 MtrunA17_Chr1g0163461 22.091 507 330 18 9 484 18 490 4.30e-17 84.3
Msa0887280 MtrunA17_Chr7g0235261 22.706 436 289 15 66 489 87 486 5.57e-17 84.0
Msa0887280 MtrunA17_Chr1g0204271 23.117 385 249 11 121 484 120 478 5.58e-17 83.6
Msa0887280 MtrunA17_Chr7g0248991 35.246 122 76 3 314 435 233 351 5.67e-17 82.8
Msa0887280 MtrunA17_Chr1g0183611 24.806 258 185 8 241 492 150 404 5.88e-17 83.2
Msa0887280 MtrunA17_Chr6g0449381 22.945 292 213 6 178 463 170 455 8.86e-17 83.2
Msa0887280 MtrunA17_Chr5g0431631 30.556 144 99 1 2 145 19 161 9.50e-17 77.8
Msa0887280 MtrunA17_Chr1g0184461 22.351 519 358 16 17 519 19 508 1.69e-16 82.4
Msa0887280 MtrunA17_Chr3g0104351 28.992 238 144 9 243 467 245 470 1.79e-16 82.4
Msa0887280 MtrunA17_Chr2g0313751 25.474 369 237 15 125 482 171 512 1.96e-16 82.0
Msa0887280 MtrunA17_Chr8g0348751 30.058 173 111 2 305 467 292 464 2.46e-16 82.0
Msa0887280 MtrunA17_Chr2g0310371 36.301 146 85 3 8 152 6 144 2.64e-16 76.3
Msa0887280 MtrunA17_Chr6g0479681 24.783 460 279 18 47 482 82 498 3.00e-16 81.6
Msa0887280 MtrunA17_Chr1g0184421 20.962 520 356 15 17 515 19 504 8.56e-16 80.1
Msa0887280 MtrunA17_Chr8g0351461 23.219 379 256 10 121 483 119 478 1.03e-15 79.7
Msa0887280 MtrunA17_Chr8g0372711 27.027 259 144 10 231 480 226 448 1.07e-15 79.7
Msa0887280 MtrunA17_Chr6g0472221 29.960 247 152 10 274 508 289 526 1.24e-15 79.7
Msa0887280 MtrunA17_Chr3g0107511 24.046 524 328 18 8 515 8 477 1.93e-15 79.0
Msa0887280 MtrunA17_Chr6g0457421 23.664 393 257 12 125 515 146 497 2.55e-15 78.6
Msa0887280 MtrunA17_Chr8g0351421 27.059 255 167 7 241 483 232 479 2.72e-15 78.6
Msa0887280 MtrunA17_Chr5g0443731 25.614 285 177 11 188 467 173 427 3.06e-15 78.2
Msa0887280 MtrunA17_Chr1g0163351 24.028 283 205 9 215 492 207 484 3.10e-15 78.2
Msa0887280 MtrunA17_Chr8g0351441 24.601 313 199 8 187 483 187 478 4.42e-15 77.8
Msa0887280 MtrunA17_Chr6g0458571 40.594 101 56 2 6 104 27 125 4.76e-15 72.0
Msa0887280 MtrunA17_Chr2g0313791 23.529 374 244 15 120 482 138 480 6.07e-15 77.4
Msa0887280 MtrunA17_Chr3g0078411 30.220 182 107 7 305 480 262 429 9.62e-15 76.6
Msa0887280 MtrunA17_Chr8g0387001 27.706 231 134 6 305 504 289 517 1.21e-14 76.6
Msa0887280 MtrunA17_Chr1g0163211 26.693 251 163 8 241 484 236 472 1.32e-14 76.3
Msa0887280 MtrunA17_Chr7g0227291 22.289 498 337 17 12 492 9 473 1.34e-14 76.3
Msa0887280 MtrunA17_Chr1g0163491 24.701 251 182 6 247 492 252 500 1.36e-14 76.3
Msa0887280 MtrunA17_Chr8g0372331 30.233 129 87 3 395 521 2 129 1.52e-14 70.5
Msa0887280 MtrunA17_Chr1g0163511 27.083 192 122 4 304 484 306 490 2.06e-14 75.9
Msa0887280 MtrunA17_Chr8g0383801 50.000 50 25 0 420 469 4 53 2.17e-14 68.9
Msa0887280 MtrunA17_Chr4g0056981 49.315 73 36 1 342 414 1 72 4.52e-14 67.4
Msa0887280 MtrunA17_Chr8g0371761 31.293 147 88 3 335 469 1 146 7.89e-14 68.9
Msa0887280 MtrunA17_Chr7g0260821 25.103 243 165 6 247 485 244 473 7.99e-14 73.9
Msa0887280 MtrunA17_Chr8g0362731 23.656 372 234 15 125 482 42 377 8.90e-14 73.2
Msa0887280 MtrunA17_Chr6g0455461 29.670 182 108 6 305 480 262 429 9.18e-14 73.6
Msa0887280 MtrunA17_Chr1g0163371 25.128 195 140 4 302 492 9 201 1.08e-13 70.5
Msa0887280 MtrunA17_Chr3g0089351 27.488 211 131 6 280 484 169 363 1.66e-13 72.4
Msa0887280 MtrunA17_Chr1g0171041 24.901 253 177 8 241 484 230 478 6.28e-13 71.2
Msa0887280 MtrunA17_Chr1g0163501 27.136 199 138 5 306 498 288 485 6.28e-13 70.9
Msa0887280 MtrunA17_Chr7g0219961 20.758 501 300 19 7 482 2 430 6.83e-13 70.9
Msa0887280 MtrunA17_Chr2g0313811 22.368 380 247 15 125 482 144 497 8.71e-13 70.9
Msa0887280 MtrunA17_Chr5g0400421 20.696 517 319 20 1 484 4 462 9.53e-13 70.5
Msa0887280 MtrunA17_Chr8g0388921 28.365 208 124 8 285 483 257 448 1.24e-12 70.1
Msa0887280 MtrunA17_Chr1g0163431 27.692 195 133 6 247 437 199 389 1.49e-12 69.7
Msa0887280 MtrunA17_Chr2g0313801 22.493 369 248 13 125 482 144 485 1.72e-12 69.7
Msa0887280 MtrunA17_Chr1g0153371 23.246 499 322 23 1 490 1 447 1.95e-12 69.3
Msa0887280 MtrunA17_Chr8g0341951 21.138 492 324 20 6 482 2 444 2.82e-12 68.9
Msa0887280 MtrunA17_Chr4g0076181 33.696 92 61 0 73 164 3 94 3.54e-12 64.7
Msa0887280 MtrunA17_Chr8g0381561 35.200 125 69 5 367 491 2 114 4.84e-12 63.2
Msa0887280 MtrunA17_Chr5g0431601 36.250 80 50 1 73 152 3 81 1.28e-11 60.8
Msa0887280 MtrunA17_Chr8g0364081 24.800 250 165 9 250 482 267 510 1.31e-11 67.0
Msa0887280 MtrunA17_Chr6g0484771 26.923 130 89 1 71 200 1 124 1.34e-11 62.4
Msa0887280 MtrunA17_Chr8g0380931 27.397 219 132 9 272 481 270 470 1.37e-11 67.0
Msa0887280 MtrunA17_Chr8g0334891 23.418 474 306 20 29 491 34 461 2.16e-11 66.2
Msa0887280 MtrunA17_Chr1g0178971 27.092 251 159 9 241 484 246 479 2.71e-11 65.9
Msa0887280 MtrunA17_Chr1g0154731 27.108 166 112 4 318 482 315 472 2.79e-11 65.9
Msa0887280 MtrunA17_Chr8g0372411 29.146 199 126 7 286 480 257 444 2.95e-11 65.9
Msa0887280 MtrunA17_Chr1g0193811 24.186 430 276 19 67 482 92 485 3.03e-11 65.9
Msa0887280 MtrunA17_Chr5g0446131 21.410 383 264 15 111 482 127 483 3.18e-11 65.9
Msa0887280 MtrunA17_Chr2g0321171 25.714 245 164 5 241 484 241 468 3.44e-11 65.5
Msa0887280 MtrunA17_Chr7g0225531 21.386 505 336 19 17 492 19 491 6.11e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0887280 AT4G31970.1 47.438 527 266 8 1 521 1 522 3.45e-176 506
Msa0887280 AT4G31940.1 47.637 529 263 9 1 521 1 523 3.24e-174 501
Msa0887280 AT4G31950.1 45.265 528 265 10 1 521 1 511 1.17e-156 456
Msa0887280 AT3G25180.1 43.856 529 272 13 1 521 1 512 4.68e-142 419
Msa0887280 AT2G25160.1 41.683 523 292 8 6 521 2 518 3.24e-139 412
Msa0887280 AT5G07990.1 35.741 526 303 11 8 521 6 508 1.55e-99 310
Msa0887280 AT4G37320.1 37.187 519 291 12 1 515 1 488 3.86e-98 306
Msa0887280 AT4G37370.1 36.220 508 296 10 12 517 7 488 8.21e-98 305
Msa0887280 AT2G25160.2 40.389 411 232 8 6 409 2 406 7.08e-97 300
Msa0887280 AT4G37340.1 36.364 506 289 12 17 515 10 489 3.48e-94 296
Msa0887280 AT4G37330.1 35.397 517 300 11 1 515 1 485 8.72e-93 292
Msa0887280 AT4G37400.1 35.516 504 300 10 13 515 10 489 4.09e-92 290
Msa0887280 AT4G37360.1 35.317 504 294 10 16 515 13 488 8.17e-92 290
Msa0887280 AT4G37430.1 34.381 509 307 11 12 515 6 492 1.25e-91 289
Msa0887280 AT2G23190.1 34.510 510 300 11 12 515 51 532 2.01e-91 290
Msa0887280 AT3G25180.2 41.463 410 217 12 1 402 1 395 6.44e-89 279
Msa0887280 AT5G36220.1 34.314 510 301 13 12 515 13 494 1.10e-88 281
Msa0887280 AT4G37310.1 33.399 509 314 9 13 515 11 500 4.75e-86 275
Msa0887280 AT2G23220.1 33.333 495 304 8 22 515 35 504 1.56e-84 271
Msa0887280 AT4G37410.1 34.047 514 308 12 6 515 3 489 6.94e-84 269
Msa0887280 AT1G01280.1 32.479 468 302 7 57 521 53 509 1.47e-82 266
Msa0887280 AT5G57220.1 33.199 497 296 13 1 495 1 463 7.01e-82 263
Msa0887280 AT3G28740.1 34.623 491 293 9 27 515 33 497 1.85e-81 263
Msa0887280 AT5G57260.1 31.613 465 291 9 25 483 22 465 3.01e-79 257
Msa0887280 AT1G13080.1 33.013 521 290 16 12 511 15 497 8.34e-79 256
Msa0887280 AT3G26300.1 32.712 483 292 14 10 483 4 462 1.45e-78 255
Msa0887280 AT5G67310.1 31.548 504 315 11 8 508 16 492 1.30e-77 253
Msa0887280 AT1G66540.1 38.481 395 219 8 122 515 4 375 3.77e-77 248
Msa0887280 AT3G26310.1 32.298 483 293 11 10 483 4 461 5.37e-77 251
Msa0887280 AT3G48270.1 32.158 482 290 13 27 505 28 475 5.74e-77 250
Msa0887280 AT5G10600.1 31.558 507 315 10 12 514 27 505 7.47e-77 251
Msa0887280 AT3G48310.1 31.120 482 295 12 27 505 29 476 1.01e-76 250
Msa0887280 AT3G48280.1 32.039 515 313 14 10 517 6 490 1.34e-75 247
Msa0887280 AT2G40890.1 30.864 486 311 11 42 521 35 501 2.18e-75 247
Msa0887280 AT3G26280.1 32.809 509 315 11 16 517 15 503 2.70e-75 246
Msa0887280 AT3G26280.2 32.809 509 315 11 16 517 32 520 3.45e-75 247
Msa0887280 AT4G31500.1 31.875 480 301 10 8 483 6 463 6.79e-74 243
Msa0887280 AT3G48320.1 30.847 496 310 11 16 508 14 479 9.09e-74 242
Msa0887280 AT4G12320.1 32.190 525 326 11 3 517 8 512 3.32e-73 241
Msa0887280 AT3G26270.1 32.056 496 301 11 27 511 26 496 3.48e-73 241
Msa0887280 AT3G26330.1 31.072 457 286 11 32 483 30 462 7.72e-73 240
Msa0887280 AT4G12300.1 31.689 527 324 13 3 517 8 510 7.90e-73 240
Msa0887280 AT5G10610.1 31.703 511 317 10 8 514 7 489 1.63e-72 239
Msa0887280 AT3G48300.1 31.712 473 289 13 42 511 37 478 3.52e-72 238
Msa0887280 AT3G48300.2 31.712 473 289 13 42 511 39 480 3.70e-72 238
Msa0887280 AT3G26180.1 31.115 511 314 12 13 511 13 497 1.29e-70 234
Msa0887280 AT3G26320.1 29.362 470 306 8 18 483 15 462 3.82e-70 233
Msa0887280 AT3G26230.1 31.953 507 321 12 12 511 4 493 7.85e-70 232
Msa0887280 AT2G45560.1 32.778 540 314 16 1 519 1 512 1.78e-69 231
Msa0887280 AT3G26210.1 32.326 430 272 7 57 483 52 465 1.80e-69 231
Msa0887280 AT3G26170.1 31.008 516 313 13 10 511 11 497 2.27e-69 231
Msa0887280 AT4G36220.1 31.034 493 300 13 41 516 47 516 9.64e-69 230
Msa0887280 AT5G06900.1 30.462 476 304 10 35 508 35 485 1.20e-68 229
Msa0887280 AT3G26290.1 32.403 466 279 12 25 483 26 462 1.44e-68 229
Msa0887280 AT3G26290.2 32.403 466 279 12 25 483 39 475 1.47e-68 229
Msa0887280 AT1G13110.1 30.957 491 315 10 21 506 20 491 2.97e-68 228
Msa0887280 AT2G30770.1 30.738 488 296 13 28 505 28 483 3.10e-68 228
Msa0887280 AT3G48290.1 29.668 482 302 11 27 505 30 477 1.01e-67 226
Msa0887280 AT1G66540.2 39.583 336 182 7 181 515 1 316 2.96e-67 220
Msa0887280 AT1G13090.2 31.974 466 283 12 27 483 22 462 4.56e-67 224
Msa0887280 AT5G44620.1 32.099 486 295 10 43 516 55 517 6.91e-67 225
Msa0887280 AT4G12310.1 31.507 511 322 10 19 521 29 519 8.02e-67 224
Msa0887280 AT1G33720.1 31.827 509 311 14 16 508 12 500 9.50e-67 224
Msa0887280 AT2G45570.1 31.423 506 315 12 18 511 19 504 1.14e-66 224
Msa0887280 AT2G24180.1 30.519 462 292 9 26 483 32 468 2.55e-65 220
Msa0887280 AT1G74110.1 30.739 501 307 12 9 483 20 506 4.68e-65 220
Msa0887280 AT4G22710.1 31.388 497 323 8 26 521 45 524 7.02e-65 219
Msa0887280 AT2G30750.1 31.237 493 297 13 23 505 23 483 1.06e-64 218
Msa0887280 AT4G13290.1 30.407 467 285 13 22 482 22 454 1.18e-64 218
Msa0887280 AT4G13310.1 31.183 465 285 13 27 482 23 461 1.40e-64 218
Msa0887280 AT3G26220.1 32.604 503 309 13 17 511 16 496 1.78e-64 218
Msa0887280 AT5G25180.1 30.526 475 299 14 14 483 10 458 2.19e-64 218
Msa0887280 AT2G02580.1 30.913 482 302 11 10 483 4 462 2.40e-64 218
Msa0887280 AT5G04330.1 29.498 478 297 12 34 497 33 484 5.84e-64 217
Msa0887280 AT2G45550.1 30.942 446 285 9 42 483 46 472 8.23e-64 216
Msa0887280 AT4G22690.1 30.000 520 346 8 3 521 53 555 1.19e-63 217
Msa0887280 AT5G25120.1 30.655 473 295 13 17 483 13 458 2.05e-63 215
Msa0887280 AT2G42250.1 27.505 509 338 10 1 496 1 491 5.29e-63 214
Msa0887280 AT5G06905.1 30.364 494 313 9 1 482 1 475 8.70e-63 214
Msa0887280 AT3G48290.2 28.150 508 302 12 27 505 30 503 2.60e-62 213
Msa0887280 AT5G05260.2 28.195 493 332 11 40 521 46 527 4.97e-62 212
Msa0887280 AT3G26160.1 28.983 521 325 12 13 510 3 501 7.41e-62 211
Msa0887280 AT3G26200.1 30.364 494 316 11 29 514 24 497 2.35e-61 209
Msa0887280 AT4G12330.1 31.000 500 310 12 2 494 18 489 3.01e-61 210
Msa0887280 AT5G25130.1 30.233 473 294 13 17 483 16 458 3.65e-61 209
Msa0887280 AT3G26150.1 28.405 514 332 11 10 510 11 501 4.44e-61 209
Msa0887280 AT4G13770.1 28.916 498 328 12 8 500 6 482 5.09e-61 209
Msa0887280 AT2G45580.1 31.027 477 296 13 57 520 59 515 1.07e-60 208
Msa0887280 AT1G13710.1 30.672 476 303 13 45 515 59 512 1.25e-60 208
Msa0887280 AT4G15360.1 30.392 510 319 15 21 521 27 509 1.64e-60 208
Msa0887280 AT5G24950.1 27.932 469 308 9 42 505 40 483 1.78e-60 207
Msa0887280 AT3G26190.1 30.870 460 293 10 29 483 24 463 3.73e-60 206
Msa0887280 AT1G11610.1 29.501 461 293 11 28 483 28 461 4.88e-60 206
Msa0887280 AT1G11610.2 29.501 461 293 11 28 483 28 461 7.15e-60 206
Msa0887280 AT5G35715.1 29.890 455 278 10 73 511 3 432 8.12e-60 204
Msa0887280 AT3G20130.1 30.689 479 292 14 45 508 53 506 1.50e-59 205
Msa0887280 AT3G20120.4 31.818 462 285 10 18 467 16 459 2.25e-59 205
Msa0887280 AT3G53300.1 31.410 468 278 12 30 483 25 463 2.74e-59 204
Msa0887280 AT5G36220.2 36.095 338 196 8 178 515 31 348 4.60e-59 199
Msa0887280 AT3G32047.1 30.020 503 325 11 8 505 16 496 1.29e-58 202
Msa0887280 AT3G52970.1 27.713 516 348 12 10 514 11 512 2.29e-58 202
Msa0887280 AT3G61040.1 32.135 473 286 13 54 516 51 498 2.83e-58 201
Msa0887280 AT3G20090.2 29.638 469 310 10 53 518 61 512 3.43e-58 202
Msa0887280 AT1G33730.1 39.655 290 164 6 224 508 81 364 6.04e-58 197
Msa0887280 AT1G33730.2 39.655 290 164 6 224 508 81 364 6.04e-58 197
Msa0887280 AT5G25140.1 28.690 481 306 12 12 483 6 458 1.21e-57 199
Msa0887280 AT3G44250.1 31.183 465 284 11 29 483 24 462 2.01e-57 199
Msa0887280 AT4G15330.1 31.423 471 284 15 4 463 8 450 3.78e-57 199
Msa0887280 AT1G74550.1 28.980 490 298 12 43 521 36 486 4.37e-57 198
Msa0887280 AT5G24960.1 30.200 500 310 12 24 514 27 496 8.80e-57 197
Msa0887280 AT3G20110.1 28.916 498 319 12 25 518 34 500 9.00e-57 197
Msa0887280 AT3G20140.1 30.769 429 276 9 40 467 48 456 1.01e-56 197
Msa0887280 AT3G20940.1 28.512 477 316 11 35 506 43 499 1.53e-56 197
Msa0887280 AT1G13100.1 29.825 456 290 11 66 512 55 489 2.07e-56 196
Msa0887280 AT2G22330.1 28.392 479 327 7 11 483 33 501 3.35e-56 197
Msa0887280 AT2G22330.2 28.392 479 327 7 11 483 56 524 4.60e-56 197
Msa0887280 AT1G13080.2 33.590 390 222 12 136 511 13 379 5.40e-56 192
Msa0887280 AT1G33720.4 38.966 290 166 6 224 508 85 368 6.37e-56 192
Msa0887280 AT1G33720.3 38.966 290 166 6 224 508 85 368 6.37e-56 192
Msa0887280 AT1G33720.5 38.966 290 166 6 224 508 85 368 6.37e-56 192
Msa0887280 AT3G20100.1 28.008 482 318 11 43 514 50 512 6.79e-56 195
Msa0887280 AT1G50520.1 28.008 482 321 11 43 518 52 513 8.39e-56 196
Msa0887280 AT5G09970.1 29.560 477 309 15 42 512 77 532 1.90e-55 195
Msa0887280 AT3G53280.1 30.388 464 288 11 29 483 24 461 4.32e-55 193
Msa0887280 AT3G52970.2 27.032 529 349 13 10 514 11 526 4.45e-55 194
Msa0887280 AT4G39950.1 28.838 482 325 8 5 482 31 498 9.45e-55 193
Msa0887280 AT4G39950.2 28.838 482 325 8 5 482 71 538 1.73e-54 193
Msa0887280 AT3G26830.1 28.221 489 311 12 7 483 2 462 2.54e-54 191
Msa0887280 AT1G28430.1 29.350 477 314 10 10 483 18 474 3.01e-54 191
Msa0887280 AT5G42590.1 28.317 505 330 12 8 505 5 484 4.00e-54 190
Msa0887280 AT2G14100.1 27.968 497 328 13 8 498 17 489 1.61e-53 189
Msa0887280 AT2G46660.1 29.774 487 301 14 40 517 76 530 1.96e-53 189
Msa0887280 AT5G05260.1 26.559 497 303 11 40 521 46 495 2.16e-53 188
Msa0887280 AT3G61880.1 31.138 501 313 14 23 517 57 531 3.78e-53 188
Msa0887280 AT5G42580.1 29.502 522 332 12 1 518 7 496 5.01e-53 187
Msa0887280 AT3G61880.2 30.986 497 311 14 29 517 59 531 8.82e-53 188
Msa0887280 AT1G33720.2 36.538 312 168 7 224 508 85 393 1.27e-52 184
Msa0887280 AT1G79370.1 26.325 547 368 13 1 521 1 538 1.94e-52 187
Msa0887280 AT4G15350.1 28.782 476 316 10 45 515 45 502 2.36e-52 186
Msa0887280 AT5G04630.1 27.500 520 344 12 7 516 13 509 2.87e-52 186
Msa0887280 AT3G20960.2 31.051 409 260 9 63 467 69 459 6.57e-52 185
Msa0887280 AT3G20130.2 31.469 429 255 13 95 508 74 478 8.58e-52 184
Msa0887280 AT1G16410.1 26.471 510 347 13 26 521 38 533 1.10e-51 184
Msa0887280 AT3G20950.1 27.032 529 349 15 1 515 7 512 2.48e-51 183
Msa0887280 AT2G27000.1 28.838 482 284 16 57 515 61 506 7.96e-51 182
Msa0887280 AT1G74540.1 29.047 451 274 12 58 495 49 466 1.91e-50 180
Msa0887280 AT3G10560.1 26.136 528 353 13 1 516 11 513 3.35e-50 180
Msa0887280 AT1G01190.1 29.980 507 309 20 19 515 61 531 8.97e-50 179
Msa0887280 AT1G01190.2 29.980 507 309 20 19 515 66 536 1.05e-49 179
Msa0887280 AT5G47990.1 27.731 476 314 11 46 515 56 507 2.20e-49 177
Msa0887280 AT1G50560.1 28.099 484 321 12 45 521 54 517 3.62e-49 177
Msa0887280 AT1G58260.1 26.275 510 340 13 30 521 34 525 3.69e-49 177
Msa0887280 AT2G45580.2 36.000 300 182 7 227 520 66 361 1.11e-48 172
Msa0887280 AT1G16400.1 25.940 532 353 14 9 521 23 532 1.62e-48 176
Msa0887280 AT5G04660.1 26.857 525 358 13 1 516 5 512 2.07e-48 175
Msa0887280 AT4G15330.2 30.573 471 260 16 4 463 8 422 2.45e-48 174
Msa0887280 AT3G26180.2 36.940 268 151 5 252 511 106 363 1.32e-47 169
Msa0887280 AT3G20080.2 28.656 506 313 14 30 515 32 509 3.24e-46 169
Msa0887280 AT3G20080.1 28.656 506 313 14 30 515 32 509 3.24e-46 169
Msa0887280 AT3G10570.1 25.991 454 317 8 66 516 76 513 4.78e-46 169
Msa0887280 AT3G20960.1 32.873 362 221 9 110 467 13 356 7.20e-46 166
Msa0887280 AT4G15380.1 28.172 465 296 12 63 517 70 506 2.97e-45 166
Msa0887280 AT3G20120.2 34.412 340 203 8 131 467 1 323 3.59e-45 163
Msa0887280 AT3G20120.3 34.412 340 203 8 131 467 1 323 3.59e-45 163
Msa0887280 AT3G20120.1 34.412 340 203 8 131 467 1 323 3.59e-45 163
Msa0887280 AT2G30490.1 27.650 434 294 8 56 485 54 471 1.11e-44 165
Msa0887280 AT3G20090.1 30.691 391 251 10 131 518 1 374 7.21e-44 160
Msa0887280 AT1G64940.1 26.306 517 357 12 12 517 7 510 6.52e-43 160
Msa0887280 AT2G05180.1 29.977 437 288 9 1 436 7 426 9.76e-43 158
Msa0887280 AT5G35917.1 24.597 496 315 10 35 521 43 488 9.76e-43 159
Msa0887280 AT4G13310.2 28.316 392 249 11 27 410 23 390 5.05e-42 155
Msa0887280 AT1G11600.1 27.799 536 339 16 1 515 1 509 2.35e-40 153
Msa0887280 AT5G25900.1 27.071 495 319 14 35 517 45 509 2.74e-40 152
Msa0887280 AT4G20240.1 27.716 451 284 15 31 473 28 444 5.12e-38 145
Msa0887280 AT2G27010.1 27.253 466 294 12 57 515 57 484 5.27e-38 146
Msa0887280 AT3G20080.4 29.825 399 239 12 131 515 1 372 1.10e-37 143
Msa0887280 AT3G20080.5 29.825 399 239 12 131 515 1 372 1.10e-37 143
Msa0887280 AT3G20080.6 29.825 399 239 12 131 515 1 372 1.10e-37 143
Msa0887280 AT3G20080.3 29.825 399 239 12 131 515 1 372 1.10e-37 143
Msa0887280 AT1G64950.1 25.567 485 339 12 41 517 39 509 1.27e-37 145
Msa0887280 AT3G20935.1 30.345 290 174 8 249 515 50 334 1.99e-37 141
Msa0887280 AT3G53290.1 28.571 385 232 10 88 468 10 355 2.17e-35 137
Msa0887280 AT1G64930.1 23.622 508 357 10 23 517 21 510 2.69e-35 139
Msa0887280 AT2G12190.1 24.587 484 347 10 41 517 39 511 4.09e-35 138
Msa0887280 AT1G16410.2 25.450 389 267 10 26 404 38 413 1.03e-32 130
Msa0887280 AT1G64900.1 25.380 461 324 10 60 515 58 503 5.44e-32 129
Msa0887280 AT5G61320.1 26.195 481 310 13 41 515 46 487 9.67e-32 128
Msa0887280 AT5G24960.2 26.854 391 252 10 28 411 28 391 2.60e-31 125
Msa0887280 AT3G03470.1 23.654 520 365 12 8 515 10 509 8.61e-30 122
Msa0887280 AT2G45580.3 26.796 362 239 9 57 410 59 402 4.11e-29 119
Msa0887280 AT4G20240.2 26.684 386 252 12 31 410 28 388 6.44e-29 118
Msa0887280 AT3G61040.2 29.201 363 228 10 57 413 54 393 2.40e-28 117
Msa0887280 AT1G31800.1 23.690 439 301 14 67 496 139 552 8.47e-25 108
Msa0887280 AT2G26710.1 25.967 362 238 14 125 482 149 484 1.21e-23 104
Msa0887280 AT4G15110.1 25.260 289 182 7 238 496 277 561 1.64e-23 104
Msa0887280 AT5G52320.2 24.289 457 305 13 24 463 20 452 4.72e-23 102
Msa0887280 AT5G52320.1 24.289 457 305 13 24 463 20 452 5.94e-23 102
Msa0887280 AT4G32170.1 22.865 363 265 10 127 484 122 474 2.14e-22 100
Msa0887280 AT4G39510.1 24.498 498 330 18 9 484 3 476 2.74e-22 100
Msa0887280 AT4G39500.1 24.688 320 215 10 179 484 130 437 3.85e-22 99.8
Msa0887280 AT4G39500.2 24.688 320 215 10 179 484 180 487 4.05e-22 100
Msa0887280 AT4G39480.1 23.501 417 248 12 127 511 123 500 3.12e-21 97.4
Msa0887280 AT1G05160.2 24.051 474 302 20 29 490 41 468 6.96e-21 96.3
Msa0887280 AT1G05160.1 24.051 474 302 20 29 490 41 468 6.96e-21 96.3
Msa0887280 AT1G13090.1 27.046 281 178 9 27 302 22 280 7.09e-21 93.6
Msa0887280 AT5G02900.1 26.016 246 173 6 247 484 205 449 3.69e-20 94.0
Msa0887280 AT1G47620.1 22.164 379 269 11 127 493 131 495 4.77e-20 93.6
Msa0887280 AT1G65340.1 23.181 371 252 12 127 484 124 474 7.76e-20 93.2
Msa0887280 AT2G21910.1 20.988 324 249 5 180 498 170 491 8.52e-20 92.8
Msa0887280 AT2G26170.1 31.020 245 150 9 251 484 260 496 2.10e-19 91.7
Msa0887280 AT3G14620.1 25.405 370 241 16 120 482 143 484 2.10e-19 91.7
Msa0887280 AT3G53130.1 30.366 191 129 2 314 502 342 530 2.22e-19 91.7
Msa0887280 AT2G23180.1 22.703 370 264 9 127 484 124 483 2.75e-19 91.3
Msa0887280 AT2G26170.2 32.189 233 139 9 263 484 189 413 3.11e-19 90.9
Msa0887280 AT4G39490.1 22.115 520 344 15 8 493 4 496 4.85e-19 90.5
Msa0887280 AT2G32440.2 27.542 236 154 8 257 488 241 463 5.77e-19 90.1
Msa0887280 AT2G32440.1 27.542 236 154 8 257 488 241 463 5.77e-19 90.1
Msa0887280 AT5G45340.2 26.050 476 284 23 1 467 1 417 9.15e-19 89.4
Msa0887280 AT5G45340.1 26.050 476 284 23 1 467 1 417 9.98e-19 89.4
Msa0887280 AT2G29090.2 25.641 468 282 22 25 482 41 452 1.26e-18 89.4
Msa0887280 AT2G29090.1 25.641 468 282 22 25 482 41 452 1.26e-18 89.4
Msa0887280 AT5G23190.1 28.958 259 164 9 239 484 260 511 1.48e-18 89.4
Msa0887280 AT1G57750.1 23.077 390 270 13 127 506 123 492 1.97e-18 88.6
Msa0887280 AT1G24540.1 27.854 219 144 5 305 515 308 520 3.63e-18 87.8
Msa0887280 AT5G35920.1 29.730 148 104 0 374 521 6 153 1.20e-17 80.5
Msa0887280 AT3G53305.1 32.474 194 104 4 297 483 123 296 1.57e-17 84.3
Msa0887280 AT3G53305.1 26.708 161 104 2 73 225 3 157 8.21e-12 67.0
Msa0887280 AT2G44890.1 24.409 381 246 11 121 482 119 476 2.28e-17 85.5
Msa0887280 AT5G24910.1 25.120 418 268 18 66 468 100 487 5.70e-17 84.3
Msa0887280 AT1G13150.1 29.858 211 133 6 315 515 312 517 7.19e-17 84.0
Msa0887280 AT1G63710.1 28.448 232 146 6 247 467 239 461 7.58e-17 84.0
Msa0887280 AT5G08250.1 26.693 251 166 7 247 484 202 447 1.09e-16 83.2
Msa0887280 AT5G08250.2 26.693 251 166 7 247 484 264 509 1.53e-16 82.8
Msa0887280 AT1G57750.2 23.795 332 226 11 128 451 124 436 1.74e-16 82.4
Msa0887280 AT1G13140.1 26.255 259 170 7 240 484 244 495 1.85e-16 82.8
Msa0887280 AT1G13140.2 29.050 179 116 3 315 484 293 469 2.22e-16 82.4
Msa0887280 AT5G52400.1 26.923 234 146 9 258 484 275 490 3.27e-16 82.0
Msa0887280 AT2G45510.1 22.874 494 332 13 7 482 14 476 3.28e-16 81.6
Msa0887280 AT3G26125.1 28.571 217 135 6 315 515 320 532 4.69e-16 81.3
Msa0887280 AT2G29090.3 31.319 182 112 4 305 482 185 357 7.83e-16 79.7
Msa0887280 AT5G58860.1 24.643 280 187 7 247 515 242 508 1.05e-15 80.1
Msa0887280 AT2G45970.1 26.141 241 158 6 239 467 232 464 1.34e-15 80.1
Msa0887280 AT4G27710.1 24.826 431 279 19 65 484 92 488 1.53e-15 79.7
Msa0887280 AT4G00360.1 26.383 235 151 5 247 467 239 465 2.54e-15 79.3
Msa0887280 AT3G14630.1 23.757 362 247 11 125 482 141 477 3.47e-15 78.6
Msa0887280 AT3G14630.2 23.757 362 247 11 125 482 196 532 4.36e-15 78.6
Msa0887280 AT2G46960.2 24.752 404 255 16 125 514 148 516 1.06e-14 77.0
Msa0887280 AT2G46960.1 24.752 404 255 16 125 514 32 400 1.22e-14 76.3
Msa0887280 AT5G36110.1 25.097 259 168 7 228 483 211 446 4.29e-14 75.1
Msa0887280 AT1G19630.3 24.891 229 158 6 261 486 231 448 7.05e-14 74.3
Msa0887280 AT2G28850.1 27.094 203 137 5 306 504 283 478 1.08e-13 73.9
Msa0887280 AT1G19630.1 26.667 225 147 8 261 482 231 440 1.13e-13 73.6
Msa0887280 AT5G38450.1 32.418 182 113 6 337 517 346 518 1.65e-13 73.6
Msa0887280 AT1G01600.1 29.885 174 111 3 305 467 294 467 3.68e-13 72.4
Msa0887280 AT3G14690.1 21.860 430 290 19 63 482 88 481 1.38e-12 70.5
Msa0887280 AT3G14690.2 21.860 430 290 19 63 482 123 516 1.49e-12 70.5
Msa0887280 AT5G38970.2 28.804 184 111 8 305 482 182 351 5.03e-12 68.2
Msa0887280 AT5G38970.4 28.804 184 111 8 305 482 182 351 5.03e-12 68.2
Msa0887280 AT5G38970.1 28.804 184 111 8 305 482 263 432 8.79e-12 67.8
Msa0887280 AT2G45560.3 24.706 255 166 8 1 245 1 239 1.01e-11 65.5
Msa0887280 AT1G67110.1 31.492 181 102 8 337 515 340 500 1.31e-11 67.4
Msa0887280 AT1G73340.1 31.361 169 105 5 316 482 288 447 1.49e-11 67.0
Msa0887280 AT5G63450.2 20.472 508 338 14 6 485 63 532 5.93e-11 65.5
Msa0887280 AT5G63450.1 20.472 508 338 14 6 485 5 474 6.06e-11 65.1
Msa0887280 AT1G75130.1 23.952 334 223 11 153 482 166 472 6.96e-11 65.1

Find 112 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGGTGTTTGAATGCTTTA+AGG 0.171475 6_1:-48481708 Msa0887280:CDS
TTACATGGTTTAATAATAAT+TGG 0.172824 6_1:+48479049 None:intergenic
TAACTTGCAGGCACTAGTTC+TGG 0.237136 6_1:-48479669 Msa0887280:intron
ACCATGTAAGCAAATATAAT+TGG 0.282081 6_1:-48479035 Msa0887280:three_prime_UTR
TTCTCTGAACTCGCGTATTC+CGG 0.290932 6_1:+48479439 None:intergenic
CAAGCAACTCATCATCTTCT+AGG 0.297309 6_1:-48482192 Msa0887280:CDS
TGTTCGAAGGCAACGAGGTT+TGG 0.320144 6_1:+48482042 None:intergenic
TTTAATCGAAGTTTGAATTT+CGG 0.330969 6_1:+48481891 None:intergenic
TTGCACCTTACGGTCCCTTT+TGG 0.332722 6_1:-48481990 Msa0887280:CDS
GCTGGTGCATGGCCAATAAT+TGG 0.339446 6_1:-48482240 Msa0887280:CDS
CATAAAGATGTTGATGTTAG+AGG 0.342366 6_1:-48479287 Msa0887280:CDS
AGGGGAAGATGGCCAATTAT+TGG 0.345925 6_1:+48482228 None:intergenic
CCGAGTTTGATGGTGAAAAT+AGG 0.354058 6_1:+48482147 None:intergenic
CTTCCTCATTTCGCGCCAAA+AGG 0.363508 6_1:+48481975 None:intergenic
TTATCAATGCATAAGATTAT+AGG 0.365770 6_1:-48479008 Msa0887280:three_prime_UTR
TAGGTGTTTGAATGCTTTAA+GGG 0.366579 6_1:-48481707 Msa0887280:CDS
TGAAAATGGTTATTTGTTAG+TGG 0.378593 6_1:-48481836 Msa0887280:CDS
ATTGATGGAACAAACATTCA+TGG 0.384835 6_1:-48481469 Msa0887280:CDS
GCCAATTATATTTGCTTACA+TGG 0.388996 6_1:+48479034 None:intergenic
TCTCAAAACACAATTGCAAT+TGG 0.389044 6_1:-48482342 Msa0887280:CDS
GTGATGCTTTCTACTATTGA+TGG 0.390450 6_1:-48481484 Msa0887280:CDS
TTAAAGAGGAAGAAGCAAAT+AGG 0.391261 6_1:-48481726 Msa0887280:CDS
GAGTTAATAGATTGATTTGA+TGG 0.392972 6_1:+48481926 None:intergenic
AACTTGCAGGCACTAGTTCT+GGG 0.397042 6_1:-48479668 Msa0887280:intron
GCCATGCACCAGCAACCATT+GGG 0.408180 6_1:+48482250 None:intergenic
AGGGATTATATGCGTTTGAT+TGG 0.410852 6_1:-48481688 Msa0887280:CDS
TACATGGTTTAATAATAATT+GGG 0.411047 6_1:+48479050 None:intergenic
CAACTCTAGTCATAAACAAT+TGG 0.425134 6_1:-48482116 Msa0887280:CDS
AAAGGAACAGCATCAGCAAT+AGG 0.430178 6_1:+48481658 None:intergenic
GTATACCAACTTGTTAATAT+CGG 0.431142 6_1:+48479514 None:intergenic
AAACATTCATGGGTTTGATT+CGG 0.433139 6_1:-48481458 Msa0887280:CDS
TGTTGCGGTGCCGAGTTTGA+TGG 0.439206 6_1:+48482137 None:intergenic
GAAGAAATGGTTTAATGAGT+TGG 0.440481 6_1:-48481809 Msa0887280:CDS
GGTACCATGGCAGACAAATA+TGG 0.442304 6_1:-48482171 Msa0887280:CDS
CGAAGGGCAAAGGATATTCC+AGG 0.446655 6_1:+48479218 None:intergenic
ATAGTTCTTAGAATGGTTGC+TGG 0.447338 6_1:-48481778 Msa0887280:CDS
ACATATAATTATGCCATGCT+TGG 0.451735 6_1:-48482015 Msa0887280:CDS
CTAGCAGTGTTACACACATA+TGG 0.452372 6_1:-48479634 Msa0887280:CDS
TTCCTTCTTCCACTTCCAAA+TGG 0.454324 6_1:+48479245 None:intergenic
TCCAAACCGATCCTAGTGTT+TGG 0.458263 6_1:-48479352 Msa0887280:CDS
TTTCTTTGACAACAGCTTGA+AGG 0.461633 6_1:+48479492 None:intergenic
GGCTTGAACTCCAATGGATC+TGG 0.462104 6_1:+48479329 None:intergenic
GCCAAACACTAGGATCGGTT+TGG 0.462571 6_1:+48479351 None:intergenic
TTGCTGGGAAAAGATACTTT+GGG 0.463151 6_1:-48481762 Msa0887280:CDS
GTTGCTGGGAAAAGATACTT+TGG 0.464876 6_1:-48481763 Msa0887280:CDS
TACCATTTGGAAGTGGAAGA+AGG 0.464975 6_1:-48479247 Msa0887280:CDS
GGCCATGCACCAGCAACCAT+TGG 0.467703 6_1:+48482249 None:intergenic
TTCATACTCACCCATCCAAA+TGG 0.472463 6_1:-48482370 Msa0887280:exon
TGTTAGTGGAGATGAAGAAA+TGG 0.472577 6_1:-48481822 Msa0887280:CDS
ACCACAGAAGTCATATCAAT+TGG 0.474257 6_1:+48479131 None:intergenic
ATTGAACAATCCTCATACAT+TGG 0.474800 6_1:-48479597 Msa0887280:CDS
TTCAGAGAAGATTGTCGGAT+TGG 0.484656 6_1:-48479425 Msa0887280:CDS
TGCTTGAGATTTGCTAAAGA+GGG 0.488178 6_1:+48482209 None:intergenic
TAGTGTTTGGCCAGATCCAT+TGG 0.495429 6_1:-48479339 Msa0887280:CDS
AAGAGGAGTAACTTTGATGT+TGG 0.503549 6_1:+48479100 None:intergenic
TGAAGAGAAAGATTGTTGAA+AGG 0.503627 6_1:+48482316 None:intergenic
AGAGAAGATTGTCGGATTGG+TGG 0.505865 6_1:-48479422 Msa0887280:CDS
TTCCTCATTTCGCGCCAAAA+GGG 0.511312 6_1:+48481976 None:intergenic
GCGAGTTCAGAGAAGATTGT+CGG 0.515084 6_1:-48479430 Msa0887280:CDS
TTGATGGAACAAACATTCAT+GGG 0.515661 6_1:-48481468 Msa0887280:CDS
CTCTCAGGCTTGAACTCCAA+TGG 0.517142 6_1:+48479323 None:intergenic
ATTTGCTAAAGAGGGGAAGA+TGG 0.517561 6_1:+48482217 None:intergenic
AACTCGCGTATTCCGGATAG+AGG 0.519821 6_1:+48479446 None:intergenic
CTCGACTATTCACGAACTTG+TGG 0.526518 6_1:-48479379 Msa0887280:CDS
TTGCTTGAGATTTGCTAAAG+AGG 0.531988 6_1:+48482208 None:intergenic
GGAGAGTGTGATGGTTAAAG+AGG 0.532045 6_1:-48481740 Msa0887280:CDS
TGAGAGAAATCCATTTGGAT+GGG 0.535022 6_1:+48482360 None:intergenic
CACAAGAAGAAGAGGAGTGA+AGG 0.539618 6_1:-48481544 Msa0887280:CDS
TATCCAGCATCACCTCTATC+CGG 0.540434 6_1:-48479458 Msa0887280:CDS
GGTGGCTACCATGTGAAGAA+AGG 0.541554 6_1:-48479404 Msa0887280:CDS
TTGAGAGAAATCCATTTGGA+TGG 0.544033 6_1:+48482359 None:intergenic
TGAGTAGTAAGAAATCTCTC+AGG 0.549159 6_1:+48479308 None:intergenic
ATTCCGGATAGAGGTGATGC+TGG 0.552231 6_1:+48479455 None:intergenic
ATACTTTGGGGAGAGTGTGA+TGG 0.554519 6_1:-48481749 Msa0887280:CDS
CCCCAATGGTTGCTGGTGCA+TGG 0.559739 6_1:-48482251 Msa0887280:CDS
TAGCAGTGTTACACACATAT+GGG 0.560820 6_1:-48479633 Msa0887280:CDS
AATGGATCTGGCCAAACACT+AGG 0.564780 6_1:+48479341 None:intergenic
AGTGGAAGAAGGAATTGTCC+TGG 0.565466 6_1:-48479236 Msa0887280:CDS
GTCGAGATCCTTTCTTCACA+TGG 0.568643 6_1:+48479396 None:intergenic
AGGTGTTGATAAGAGTAAAG+AGG 0.569203 6_1:-48481524 Msa0887280:CDS
TGGATGAGCACAAGAAGAAG+AGG 0.569315 6_1:-48481552 Msa0887280:CDS
ATCTGGCCAAACACTAGGAT+CGG 0.570916 6_1:+48479346 None:intergenic
GAGTTAAATATGCACTTCGA+AGG 0.574310 6_1:+48479201 None:intergenic
GAAGAAATTGATCTCCACAT+TGG 0.580531 6_1:-48479563 Msa0887280:CDS
ATATGCACTTCGAAGGGCAA+AGG 0.582790 6_1:+48479208 None:intergenic
TAGTTCTTAGAATGGTTGCT+GGG 0.583236 6_1:-48481777 Msa0887280:CDS
ATTATATGTCATGTGTTCGA+AGG 0.584497 6_1:+48482029 None:intergenic
TCGCGCCAAAAGGGACCGTA+AGG 0.585154 6_1:+48481985 None:intergenic
ATATGCACATACCATTGTTG+TGG 0.587907 6_1:+48481420 None:intergenic
TGAGTCCGATATTAACAAGT+TGG 0.588063 6_1:-48479519 Msa0887280:CDS
AGTTAAATATGCACTTCGAA+GGG 0.594135 6_1:+48479202 None:intergenic
TGGTGTTATCACAGAGTGGT+TGG 0.599368 6_1:-48481572 Msa0887280:CDS
AGGACCATATTTGTCTGCCA+TGG 0.603991 6_1:+48482167 None:intergenic
CTGTTGTCAAAGAAACACTA+AGG 0.605383 6_1:-48479484 Msa0887280:CDS
GTTTATGACTAGAGTTGTTG+CGG 0.607638 6_1:+48482122 None:intergenic
CATGCACCAGCAACCATTGG+GGG 0.611909 6_1:+48482252 None:intergenic
CCATGCACCAGCAACCATTG+GGG 0.613749 6_1:+48482251 None:intergenic
ATTTGGATGGGTGAGTATGA+AGG 0.625428 6_1:+48482372 None:intergenic
TGGATGGGTGAGTATGAAGG+TGG 0.631722 6_1:+48482375 None:intergenic
AGAGAAAGATTGTTGAAAGG+AGG 0.635694 6_1:+48482319 None:intergenic
GCTTGAGATTTGCTAAAGAG+GGG 0.641772 6_1:+48482210 None:intergenic
GGTTTGATGAGAACTTCAAG+AGG 0.642889 6_1:+48479083 None:intergenic
TCATCATCTTCTAGGTACCA+TGG 0.646557 6_1:-48482184 Msa0887280:CDS
GTAAGGTGCAAAACCAAGCA+TGG 0.649745 6_1:+48482002 None:intergenic
TGCTGGGAAAAGATACTTTG+GGG 0.653926 6_1:-48481761 Msa0887280:CDS
AATTGATATGACTTCTGTGG+TGG 0.658420 6_1:-48479129 Msa0887280:CDS
TAATAATTGGGAGACAAACG+AGG 0.662168 6_1:+48479062 None:intergenic
ATAATCTCTCTTTGCCAATG+TGG 0.685816 6_1:+48479549 None:intergenic
TGTCATCGAAGCCACAACAA+TGG 0.691519 6_1:-48481431 Msa0887280:intron
TGGATGGTGTTATCACAGAG+TGG 0.718972 6_1:-48481576 Msa0887280:CDS
TCATGTGTTCGAAGGCAACG+AGG 0.736893 6_1:+48482037 None:intergenic
GCCAATTGATATGACTTCTG+TGG 0.737883 6_1:-48479132 Msa0887280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATAATTTTTGGAAAAAT+AGG - chr6_1:48479522-48479541 Msa0887280:CDS 10.0%
!! ATTAATAAATAAGGATATTT+GGG + chr6_1:48480343-48480362 None:intergenic 10.0%
!! AATTAATAAATAAGGATATT+TGG + chr6_1:48480344-48480363 None:intergenic 10.0%
!!! CTTATTTATTAATTTTGTTA+CGG - chr6_1:48480350-48480369 Msa0887280:intron 10.0%
!!! TTTATAAAAGATTTTTAGAT+TGG - chr6_1:48480923-48480942 Msa0887280:intron 10.0%
!! TTATTCTATATTATATTTGA+AGG - chr6_1:48481655-48481674 Msa0887280:CDS 10.0%
!!! TTAAAGAGCTATATAATTTT+TGG - chr6_1:48479513-48479532 Msa0887280:CDS 15.0%
!!! TTTTAATATAGTTCTTAGAA+TGG - chr6_1:48479601-48479620 Msa0887280:CDS 15.0%
!! ATTTAAAAATTTCTCAACTT+TGG - chr6_1:48480311-48480330 Msa0887280:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG + chr6_1:48480352-48480371 None:intergenic 15.0%
!!! TTTTTTTAGATGAATTTGTT+AGG + chr6_1:48480438-48480457 None:intergenic 15.0%
!!! GTATTTTCTTCAAAAATAAA+AGG + chr6_1:48480514-48480533 None:intergenic 15.0%
!! TAAATCATATATTGAAATGT+CGG + chr6_1:48480951-48480970 None:intergenic 15.0%
!! TGAAAATACTCATAAATTAT+AGG - chr6_1:48481025-48481044 Msa0887280:intron 15.0%
!! TACATGGTTTAATAATAATT+GGG + chr6_1:48482339-48482358 None:intergenic 15.0%
!! TTACATGGTTTAATAATAAT+TGG + chr6_1:48482340-48482359 None:intergenic 15.0%
!! TTTAATCGAAGTTTGAATTT+CGG + chr6_1:48479498-48479517 None:intergenic 20.0%
!! AAAAATAGGAAAGATGAAAA+TGG - chr6_1:48479536-48479555 Msa0887280:CDS 20.0%
!!! GAATATGAAGCAAAATTTTA+AGG - chr6_1:48479784-48479803 Msa0887280:intron 20.0%
!!! TTGCGTATATTTTTTTTTGA+GGG - chr6_1:48479997-48480016 Msa0887280:intron 20.0%
!!! TTTTTAAATTATTAGTGGTG+TGG - chr6_1:48480133-48480152 Msa0887280:intron 20.0%
!!! TTTTAAATTATTAGTGGTGT+GGG - chr6_1:48480134-48480153 Msa0887280:intron 20.0%
!! TACAAACAACAAATATGATA+TGG + chr6_1:48480171-48480190 None:intergenic 20.0%
!!! ATTTTTAAATGTTGTACCAA+CGG + chr6_1:48480301-48480320 None:intergenic 20.0%
!! ACAGGTTAAAGATTATTTAT+TGG - chr6_1:48480556-48480575 Msa0887280:intron 20.0%
!! TAAAGTAAATCTAAACTTTC+GGG + chr6_1:48480668-48480687 None:intergenic 20.0%
!! GTAAAGTAAATCTAAACTTT+CGG + chr6_1:48480669-48480688 None:intergenic 20.0%
!!! CTAAATTTGAGATAATGATT+TGG + chr6_1:48481194-48481213 None:intergenic 20.0%
!! ATTATCTCAAATTTAGCTAA+GGG - chr6_1:48481198-48481217 Msa0887280:intron 20.0%
!! TTATCAATGCATAAGATTAT+AGG - chr6_1:48482378-48482397 Msa0887280:five_prime_UTR 20.0%
!!! GAGTTAATAGATTGATTTGA+TGG + chr6_1:48479463-48479482 None:intergenic 25.0%
!! TGAAAATGGTTATTTGTTAG+TGG - chr6_1:48479550-48479569 Msa0887280:CDS 25.0%
! AAATCAAACCATCTCAAAAA+AGG + chr6_1:48479749-48479768 None:intergenic 25.0%
!!! TTTTTGAGATGGTTTGATTT+TGG - chr6_1:48479749-48479768 Msa0887280:intron 25.0%
!!! CTTGCGTATATTTTTTTTTG+AGG - chr6_1:48479996-48480015 Msa0887280:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr6_1:48480102-48480121 None:intergenic 25.0%
! ATTTCACAATCTAATATCTC+AGG + chr6_1:48480898-48480917 None:intergenic 25.0%
!! ATTTTTGCATATGCAAACAT+GGG - chr6_1:48481142-48481161 Msa0887280:intron 25.0%
! CATTATCTCAAATTTAGCTA+AGG - chr6_1:48481197-48481216 Msa0887280:intron 25.0%
!!! TTGATTGGTTTTATGGTTTT+TGG - chr6_1:48481302-48481321 Msa0887280:intron 25.0%
!! TAGGATGTTAGATTTTCTTA+CGG - chr6_1:48481432-48481451 Msa0887280:CDS 25.0%
!! GTACATTATGATTTTTCTCT+TGG - chr6_1:48481499-48481518 Msa0887280:CDS 25.0%
!!! AAATTTTATGCTTAACTTGC+AGG - chr6_1:48481705-48481724 Msa0887280:CDS 25.0%
!!! TTAACTTTTTCCAATGTATG+AGG + chr6_1:48481802-48481821 None:intergenic 25.0%
!!! GTATACCAACTTGTTAATAT+CGG + chr6_1:48481875-48481894 None:intergenic 25.0%
! ACCATGTAAGCAAATATAAT+TGG - chr6_1:48482351-48482370 Msa0887280:CDS 25.0%
!!! TGTTTTGAGAGAAATCCATT+TGG + chr6_1:48479034-48479053 None:intergenic 30.0%
TCTCAAAACACAATTGCAAT+TGG - chr6_1:48479044-48479063 Msa0887280:exon 30.0%
TGAAGAGAAAGATTGTTGAA+AGG + chr6_1:48479073-48479092 None:intergenic 30.0%
!!! TTGTTTGGTTTTGTTGGATT+TGG + chr6_1:48479114-48479133 None:intergenic 30.0%
CAACTCTAGTCATAAACAAT+TGG - chr6_1:48479270-48479289 Msa0887280:CDS 30.0%
ATTATATGTCATGTGTTCGA+AGG + chr6_1:48479360-48479379 None:intergenic 30.0%
ACATATAATTATGCCATGCT+TGG - chr6_1:48479371-48479390 Msa0887280:CDS 30.0%
GAAGAAATGGTTTAATGAGT+TGG - chr6_1:48479577-48479596 Msa0887280:CDS 30.0%
TTAAAGAGGAAGAAGCAAAT+AGG - chr6_1:48479660-48479679 Msa0887280:CDS 30.0%
ATAGGTGTTTGAATGCTTTA+AGG - chr6_1:48479678-48479697 Msa0887280:intron 30.0%
TAGGTGTTTGAATGCTTTAA+GGG - chr6_1:48479679-48479698 Msa0887280:intron 30.0%
!! GAAGCAAAATTTTAAGGAGT+TGG - chr6_1:48479790-48479809 Msa0887280:intron 30.0%
!! CAAAATTTTAAGGAGTTGGA+TGG - chr6_1:48479794-48479813 Msa0887280:intron 30.0%
ATTGATGGAACAAACATTCA+TGG - chr6_1:48479917-48479936 Msa0887280:intron 30.0%
TTGATGGAACAAACATTCAT+GGG - chr6_1:48479918-48479937 Msa0887280:intron 30.0%
AAACATTCATGGGTTTGATT+CGG - chr6_1:48479928-48479947 Msa0887280:intron 30.0%
TCAACACATGTATCATATAC+TGG + chr6_1:48480208-48480227 None:intergenic 30.0%
AACCTAATAAAGCAAATGAG+CGG + chr6_1:48480402-48480421 None:intergenic 30.0%
AAAATAAAAGGCAAGCGAAT+AGG + chr6_1:48480502-48480521 None:intergenic 30.0%
TACCTTATCAATGATCTTAC+AGG - chr6_1:48480538-48480557 Msa0887280:intron 30.0%
AACCTGTAAGATCATTGATA+AGG + chr6_1:48480543-48480562 None:intergenic 30.0%
TACCAGAATCTAGATAAACA+CGG + chr6_1:48480709-48480728 None:intergenic 30.0%
TTATTGGATCAGAATCCAAA+TGG + chr6_1:48480771-48480790 None:intergenic 30.0%
TGGAAAACTTTATCTCATGT+AGG - chr6_1:48480833-48480852 Msa0887280:intron 30.0%
GGAAAACTTTATCTCATGTA+GGG - chr6_1:48480834-48480853 Msa0887280:intron 30.0%
CATGTTTGCATATGCAAAAA+TGG + chr6_1:48481143-48481162 None:intergenic 30.0%
! CATTTTTGCATATGCAAACA+TGG - chr6_1:48481141-48481160 Msa0887280:intron 30.0%
! AAATTTAGCTAAGGGAGTTT+TGG - chr6_1:48481206-48481225 Msa0887280:intron 30.0%
TTGATGTTGAGCTGTTAATT+GGG - chr6_1:48481235-48481254 Msa0887280:intron 30.0%
!!! ATTGGTTTTATGGTTTTTGG+AGG - chr6_1:48481305-48481324 Msa0887280:intron 30.0%
!!! CTTTGTTTAGGTGTTGATTT+TGG - chr6_1:48481407-48481426 Msa0887280:intron 30.0%
!!! TTAGGTGTTGATTTTGGTTT+AGG - chr6_1:48481413-48481432 Msa0887280:intron 30.0%
! AGGATGTTAGATTTTCTTAC+GGG - chr6_1:48481433-48481452 Msa0887280:CDS 30.0%
! AGTTTAGGATGTGTTTGTAT+TGG - chr6_1:48481472-48481491 Msa0887280:CDS 30.0%
AAAAATTGAGTTAAGTGAGC+AGG - chr6_1:48481624-48481643 Msa0887280:CDS 30.0%
ATTGAACAATCCTCATACAT+TGG - chr6_1:48481789-48481808 Msa0887280:CDS 30.0%
CATAAAGATGTTGATGTTAG+AGG - chr6_1:48482099-48482118 Msa0887280:CDS 30.0%
! CATTTTGAGCTTTTACCATT+TGG - chr6_1:48482126-48482145 Msa0887280:CDS 30.0%
AGTTAAATATGCACTTCGAA+GGG + chr6_1:48482187-48482206 None:intergenic 30.0%
!! TGATGTTTTCAAGACTTCAA+AGG + chr6_1:48482229-48482248 None:intergenic 30.0%
GCCAATTATATTTGCTTACA+TGG + chr6_1:48482355-48482374 None:intergenic 30.0%
TGAGAGAAATCCATTTGGAT+GGG + chr6_1:48479029-48479048 None:intergenic 35.0%
TTGAGAGAAATCCATTTGGA+TGG + chr6_1:48479030-48479049 None:intergenic 35.0%
AGAGAAAGATTGTTGAAAGG+AGG + chr6_1:48479070-48479089 None:intergenic 35.0%
!! TGCTTGAGATTTGCTAAAGA+GGG + chr6_1:48479180-48479199 None:intergenic 35.0%
!! TTGCTTGAGATTTGCTAAAG+AGG + chr6_1:48479181-48479200 None:intergenic 35.0%
! CCTATTTTCACCATCAAACT+CGG - chr6_1:48479239-48479258 Msa0887280:CDS 35.0%
GTTTATGACTAGAGTTGTTG+CGG + chr6_1:48479267-48479286 None:intergenic 35.0%
TGTTAGTGGAGATGAAGAAA+TGG - chr6_1:48479564-48479583 Msa0887280:CDS 35.0%
ATAGTTCTTAGAATGGTTGC+TGG - chr6_1:48479608-48479627 Msa0887280:CDS 35.0%
TAGTTCTTAGAATGGTTGCT+GGG - chr6_1:48479609-48479628 Msa0887280:CDS 35.0%
TTGCTGGGAAAAGATACTTT+GGG - chr6_1:48479624-48479643 Msa0887280:CDS 35.0%
AGGGATTATATGCGTTTGAT+TGG - chr6_1:48479698-48479717 Msa0887280:intron 35.0%
!!! ATGCTGTTCCTTTTTTGAGA+TGG - chr6_1:48479738-48479757 Msa0887280:intron 35.0%
!! TTGAGATGGTTTGATTTTGG+TGG - chr6_1:48479752-48479771 Msa0887280:intron 35.0%
!! AGGTGTTGATAAGAGTAAAG+AGG - chr6_1:48479862-48479881 Msa0887280:intron 35.0%
GTGATGCTTTCTACTATTGA+TGG - chr6_1:48479902-48479921 Msa0887280:intron 35.0%
ATATGCACATACCATTGTTG+TGG + chr6_1:48479969-48479988 None:intergenic 35.0%
CTTGCGTATATTATCAAGCA+CGG - chr6_1:48480027-48480046 Msa0887280:intron 35.0%
TATTATCAAGCACGGACATT+CGG - chr6_1:48480035-48480054 Msa0887280:intron 35.0%
! GTAATTATATGTGTCGGTGT+TGG + chr6_1:48480096-48480115 None:intergenic 35.0%
! CATATACTGGCTATGAAACA+CGG + chr6_1:48480195-48480214 None:intergenic 35.0%
CAAATGAGCGGGAAAAAATT+AGG + chr6_1:48480390-48480409 None:intergenic 35.0%
ACCTAATAAAGCAAATGAGC+GGG + chr6_1:48480401-48480420 None:intergenic 35.0%
TTAGTGTGCAGGAATGAAAT+TGG + chr6_1:48480472-48480491 None:intergenic 35.0%
TAGGAATGAAATTAGTGTGC+AGG + chr6_1:48480483-48480502 None:intergenic 35.0%
! CTTTCGGGTCAAACTTAAAT+AGG + chr6_1:48480653-48480672 None:intergenic 35.0%
ATCCGTGTTTATCTAGATTC+TGG - chr6_1:48480704-48480723 Msa0887280:intron 35.0%
AGAATCCAAATGGATCGAAT+TGG + chr6_1:48480761-48480780 None:intergenic 35.0%
! GGATGGTGCACATATTTTAT+TGG + chr6_1:48480787-48480806 None:intergenic 35.0%
AGAATCCAAATGGATCGAAT+TGG + chr6_1:48480761-48480780 None:intergenic 35.0%
ATCCATTTGGATTCTGATCA+TGG - chr6_1:48480813-48480832 Msa0887280:intron 35.0%
TTCCATGATCAGAATCCAAA+TGG + chr6_1:48480818-48480837 None:intergenic 35.0%
ATCACATGACTCACAATTCT+TGG + chr6_1:48480861-48480880 None:intergenic 35.0%
GTTGATGTTGAGCTGTTAAT+TGG - chr6_1:48481234-48481253 Msa0887280:intron 35.0%
!! AGTTGATGTTCTGTTTTTCG+AGG - chr6_1:48481277-48481296 Msa0887280:intron 35.0%
!!! CTGTTTTTCGAGGTTTTGAT+TGG - chr6_1:48481287-48481306 Msa0887280:intron 35.0%
!!! CGAGGTTTTGATTGGTTTTA+TGG - chr6_1:48481295-48481314 Msa0887280:intron 35.0%
! GTTAGATTTTCTTACGGGTT+TGG - chr6_1:48481438-48481457 Msa0887280:CDS 35.0%
TACAAACACATCCTAAACTG+AGG + chr6_1:48481471-48481490 None:intergenic 35.0%
TTGGATGTTTCGTCTATACA+CGG - chr6_1:48481518-48481537 Msa0887280:CDS 35.0%
CGACTCAAACTACAAAACAA+AGG + chr6_1:48481546-48481565 None:intergenic 35.0%
TAGCAGTGTTACACACATAT+GGG - chr6_1:48481753-48481772 Msa0887280:CDS 35.0%
GAAGAAATTGATCTCCACAT+TGG - chr6_1:48481823-48481842 Msa0887280:CDS 35.0%
ATAATCTCTCTTTGCCAATG+TGG + chr6_1:48481840-48481859 None:intergenic 35.0%
TGAGTCCGATATTAACAAGT+TGG - chr6_1:48481867-48481886 Msa0887280:CDS 35.0%
TTTCTTTGACAACAGCTTGA+AGG + chr6_1:48481897-48481916 None:intergenic 35.0%
CTGTTGTCAAAGAAACACTA+AGG - chr6_1:48481902-48481921 Msa0887280:CDS 35.0%
TGAGTAGTAAGAAATCTCTC+AGG + chr6_1:48482081-48482100 None:intergenic 35.0%
GAGTTAAATATGCACTTCGA+AGG + chr6_1:48482188-48482207 None:intergenic 35.0%
ACCACAGAAGTCATATCAAT+TGG + chr6_1:48482258-48482277 None:intergenic 35.0%
AATTGATATGACTTCTGTGG+TGG - chr6_1:48482257-48482276 Msa0887280:CDS 35.0%
AAGAGGAGTAACTTTGATGT+TGG + chr6_1:48482289-48482308 None:intergenic 35.0%
TAATAATTGGGAGACAAACG+AGG + chr6_1:48482327-48482346 None:intergenic 35.0%
ATTTGGATGGGTGAGTATGA+AGG + chr6_1:48479017-48479036 None:intergenic 40.0%
TTCATACTCACCCATCCAAA+TGG - chr6_1:48479016-48479035 Msa0887280:three_prime_UTR 40.0%
!!! TGGTTTTGTTGGATTTGGAG+TGG + chr6_1:48479109-48479128 None:intergenic 40.0%
! ATTTGCTAAAGAGGGGAAGA+TGG + chr6_1:48479172-48479191 None:intergenic 40.0%
!! GCTTGAGATTTGCTAAAGAG+GGG + chr6_1:48479179-48479198 None:intergenic 40.0%
CAAGCAACTCATCATCTTCT+AGG - chr6_1:48479194-48479213 Msa0887280:CDS 40.0%
TCATCATCTTCTAGGTACCA+TGG - chr6_1:48479202-48479221 Msa0887280:CDS 40.0%
!! CCGAGTTTGATGGTGAAAAT+AGG + chr6_1:48479242-48479261 None:intergenic 40.0%
!!! ATGCTTGGTTTTGCACCTTA+CGG - chr6_1:48479386-48479405 Msa0887280:CDS 40.0%
GTTGCTGGGAAAAGATACTT+TGG - chr6_1:48479623-48479642 Msa0887280:CDS 40.0%
TGCTGGGAAAAGATACTTTG+GGG - chr6_1:48479625-48479644 Msa0887280:CDS 40.0%
AAAGGAACAGCATCAGCAAT+AGG + chr6_1:48479731-48479750 None:intergenic 40.0%
GAGTGAGCGGATCAAAATAT+GGG + chr6_1:48480279-48480298 None:intergenic 40.0%
! TCCCGCTCATTTGCTTTATT+AGG - chr6_1:48480397-48480416 Msa0887280:intron 40.0%
CTGGTAAACGTTCTCACATT+TGG - chr6_1:48480723-48480742 Msa0887280:intron 40.0%
TCCATCCAATTCGATCCATT+TGG - chr6_1:48480753-48480772 Msa0887280:intron 40.0%
TCCAAATGGATCGAATTGGA+TGG + chr6_1:48480757-48480776 None:intergenic 40.0%
ACCATCCAATTCGATCCATT+TGG - chr6_1:48480800-48480819 Msa0887280:intron 40.0%
TCCAAATGGATCGAATTGGA+TGG + chr6_1:48480757-48480776 None:intergenic 40.0%
CTGTTAATTGGGCTTGTCTT+TGG - chr6_1:48481246-48481265 Msa0887280:intron 40.0%
!!! TATGGTTTTTGGAGGTGTCA+TGG - chr6_1:48481313-48481332 Msa0887280:intron 40.0%
CATGGTAAGCAGCAATTGAT+AGG - chr6_1:48481331-48481350 Msa0887280:intron 40.0%
! TTTTTCTGTAGTTACTCGCG+AGG - chr6_1:48481368-48481387 Msa0887280:intron 40.0%
!! CTAGGGGTTTAGCTTTGTTT+AGG - chr6_1:48481395-48481414 Msa0887280:intron 40.0%
TGCACAAGATAAAGAGAGAG+TGG + chr6_1:48481570-48481589 None:intergenic 40.0%
CTCTCTCTTTATCTTGTGCA+AGG - chr6_1:48481570-48481589 Msa0887280:CDS 40.0%
CTTTATCTTGTGCAAGGACT+TGG - chr6_1:48481576-48481595 Msa0887280:CDS 40.0%
CTAGCAGTGTTACACACATA+TGG - chr6_1:48481752-48481771 Msa0887280:CDS 40.0%
TTCAGAGAAGATTGTCGGAT+TGG - chr6_1:48481961-48481980 Msa0887280:CDS 40.0%
! GAGCTTTTACCATTTGGAAG+TGG - chr6_1:48482132-48482151 Msa0887280:CDS 40.0%
TACCATTTGGAAGTGGAAGA+AGG - chr6_1:48482139-48482158 Msa0887280:CDS 40.0%
TTCCTTCTTCCACTTCCAAA+TGG + chr6_1:48482144-48482163 None:intergenic 40.0%
GCCAATTGATATGACTTCTG+TGG - chr6_1:48482254-48482273 Msa0887280:CDS 40.0%
GGTTTGATGAGAACTTCAAG+AGG + chr6_1:48482306-48482325 None:intergenic 40.0%
!!! TGGGGGTTGTTTGGTTTTGT+TGG + chr6_1:48479120-48479139 None:intergenic 45.0%
CAAAACCAAACAACCCCCAA+TGG - chr6_1:48479121-48479140 Msa0887280:CDS 45.0%
AGGGGAAGATGGCCAATTAT+TGG + chr6_1:48479161-48479180 None:intergenic 45.0%
GGTACCATGGCAGACAAATA+TGG - chr6_1:48479215-48479234 Msa0887280:CDS 45.0%
AGGACCATATTTGTCTGCCA+TGG + chr6_1:48479222-48479241 None:intergenic 45.0%
GTAAGGTGCAAAACCAAGCA+TGG + chr6_1:48479387-48479406 None:intergenic 45.0%
TTCCTCATTTCGCGCCAAAA+GGG + chr6_1:48479413-48479432 None:intergenic 45.0%
! ATACTTTGGGGAGAGTGTGA+TGG - chr6_1:48479637-48479656 Msa0887280:CDS 45.0%
! GGAGAGTGTGATGGTTAAAG+AGG - chr6_1:48479646-48479665 Msa0887280:CDS 45.0%
!! TGGATGGTGTTATCACAGAG+TGG - chr6_1:48479810-48479829 Msa0887280:intron 45.0%
!! TGGTGTTATCACAGAGTGGT+TGG - chr6_1:48479814-48479833 Msa0887280:intron 45.0%
TGGATGAGCACAAGAAGAAG+AGG - chr6_1:48479834-48479853 Msa0887280:intron 45.0%
CACAAGAAGAAGAGGAGTGA+AGG - chr6_1:48479842-48479861 Msa0887280:intron 45.0%
TGTCATCGAAGCCACAACAA+TGG - chr6_1:48479955-48479974 Msa0887280:intron 45.0%
GATTGAACGTGTCCTCGTTT+CGG - chr6_1:48480057-48480076 Msa0887280:intron 45.0%
GGAGTGAGCGGATCAAAATA+TGG + chr6_1:48480280-48480299 None:intergenic 45.0%
TTGGAGATGCTCCTCAGTTT+AGG - chr6_1:48481457-48481476 Msa0887280:CDS 45.0%
! TAACTTGCAGGCACTAGTTC+TGG - chr6_1:48481717-48481736 Msa0887280:CDS 45.0%
! AACTTGCAGGCACTAGTTCT+GGG - chr6_1:48481718-48481737 Msa0887280:CDS 45.0%
TATCCAGCATCACCTCTATC+CGG - chr6_1:48481928-48481947 Msa0887280:CDS 45.0%
TTCTCTGAACTCGCGTATTC+CGG + chr6_1:48481950-48481969 None:intergenic 45.0%
GCGAGTTCAGAGAAGATTGT+CGG - chr6_1:48481956-48481975 Msa0887280:CDS 45.0%
! AGAGAAGATTGTCGGATTGG+TGG - chr6_1:48481964-48481983 Msa0887280:CDS 45.0%
GTCGAGATCCTTTCTTCACA+TGG + chr6_1:48481993-48482012 None:intergenic 45.0%
CTCGACTATTCACGAACTTG+TGG - chr6_1:48482007-48482026 Msa0887280:CDS 45.0%
TCCAAACCGATCCTAGTGTT+TGG - chr6_1:48482034-48482053 Msa0887280:CDS 45.0%
ATCTGGCCAAACACTAGGAT+CGG + chr6_1:48482043-48482062 None:intergenic 45.0%
AATGGATCTGGCCAAACACT+AGG + chr6_1:48482048-48482067 None:intergenic 45.0%
TAGTGTTTGGCCAGATCCAT+TGG - chr6_1:48482047-48482066 Msa0887280:CDS 45.0%
AGTGGAAGAAGGAATTGTCC+TGG - chr6_1:48482150-48482169 Msa0887280:CDS 45.0%
ATATGCACTTCGAAGGGCAA+AGG + chr6_1:48482181-48482200 None:intergenic 45.0%
!!! AATATTTTTTAAATTATTAG+TGG - chr6_1:48480128-48480147 Msa0887280:intron 5.0%
!! AAATTTAAATCTATAATTTA+AGG + chr6_1:48480246-48480265 None:intergenic 5.0%
TGGATGGGTGAGTATGAAGG+TGG + chr6_1:48479014-48479033 None:intergenic 50.0%
AGCAACCATTGGGGGTTGTT+TGG + chr6_1:48479129-48479148 None:intergenic 50.0%
AAACAACCCCCAATGGTTGC+TGG - chr6_1:48479128-48479147 Msa0887280:CDS 50.0%
GCTGGTGCATGGCCAATAAT+TGG - chr6_1:48479146-48479165 Msa0887280:CDS 50.0%
TGTTCGAAGGCAACGAGGTT+TGG + chr6_1:48479347-48479366 None:intergenic 50.0%
TCATGTGTTCGAAGGCAACG+AGG + chr6_1:48479352-48479371 None:intergenic 50.0%
! TTGCACCTTACGGTCCCTTT+TGG - chr6_1:48479396-48479415 Msa0887280:CDS 50.0%
CTTCCTCATTTCGCGCCAAA+AGG + chr6_1:48479414-48479433 None:intergenic 50.0%
! TTTTGATCCGCTCACTCCGT+TGG - chr6_1:48480282-48480301 Msa0887280:intron 50.0%
TGTTGTACCAACGGAGTGAG+CGG + chr6_1:48480292-48480311 None:intergenic 50.0%
GAGAAAACCCGTGCATAGCA+CGG - chr6_1:48480593-48480612 Msa0887280:intron 50.0%
AGAAAACCCGTGCATAGCAC+GGG - chr6_1:48480594-48480613 Msa0887280:intron 50.0%
! TTTTGACCCGTGCTATGCAC+GGG + chr6_1:48480603-48480622 None:intergenic 50.0%
! CTTTTGACCCGTGCTATGCA+CGG + chr6_1:48480604-48480623 None:intergenic 50.0%
AGTTACTCGCGAGGAAGTCT+AGG - chr6_1:48481377-48481396 Msa0887280:intron 50.0%
GTTACTCGCGAGGAAGTCTA+GGG - chr6_1:48481378-48481397 Msa0887280:intron 50.0%
TTACTCGCGAGGAAGTCTAG+GGG - chr6_1:48481379-48481398 Msa0887280:intron 50.0%
ATTCCGGATAGAGGTGATGC+TGG + chr6_1:48481934-48481953 None:intergenic 50.0%
AACTCGCGTATTCCGGATAG+AGG + chr6_1:48481943-48481962 None:intergenic 50.0%
GGTGGCTACCATGTGAAGAA+AGG - chr6_1:48481982-48482001 Msa0887280:CDS 50.0%
GCCAAACACTAGGATCGGTT+TGG + chr6_1:48482038-48482057 None:intergenic 50.0%
GGCTTGAACTCCAATGGATC+TGG + chr6_1:48482060-48482079 None:intergenic 50.0%
CTCTCAGGCTTGAACTCCAA+TGG + chr6_1:48482066-48482085 None:intergenic 50.0%
CGAAGGGCAAAGGATATTCC+AGG + chr6_1:48482171-48482190 None:intergenic 50.0%
CATGCACCAGCAACCATTGG+GGG + chr6_1:48479137-48479156 None:intergenic 55.0%
CCATGCACCAGCAACCATTG+GGG + chr6_1:48479138-48479157 None:intergenic 55.0%
GCCATGCACCAGCAACCATT+GGG + chr6_1:48479139-48479158 None:intergenic 55.0%
! TGTTGCGGTGCCGAGTTTGA+TGG + chr6_1:48479252-48479271 None:intergenic 55.0%
! GTCCCTTTTGGCGCGAAATG+AGG - chr6_1:48479408-48479427 Msa0887280:CDS 55.0%
CCCCAATGGTTGCTGGTGCA+TGG - chr6_1:48479135-48479154 Msa0887280:CDS 60.0%
GGCCATGCACCAGCAACCAT+TGG + chr6_1:48479140-48479159 None:intergenic 60.0%
TCGCGCCAAAAGGGACCGTA+AGG + chr6_1:48479404-48479423 None:intergenic 60.0%
CACGTGTCGTGTCCGAAACG+AGG + chr6_1:48480072-48480091 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 48479004 48482404 48479004 ID=Msa0887280;Name=Msa0887280
chr6_1 mRNA 48479004 48482404 48479004 ID=Msa0887280-mRNA-1;Parent=Msa0887280;Name=Msa0887280-mRNA-1;_AED=0.15;_eAED=0.15;_QI=31|1|1|1|1|1|2|54|521
chr6_1 exon 48479004 48479681 48479004 ID=Msa0887280-mRNA-1:exon:10105;Parent=Msa0887280-mRNA-1
chr6_1 exon 48481432 48482404 48481432 ID=Msa0887280-mRNA-1:exon:10104;Parent=Msa0887280-mRNA-1
chr6_1 five_prime_UTR 48482374 48482404 48482374 ID=Msa0887280-mRNA-1:five_prime_utr;Parent=Msa0887280-mRNA-1
chr6_1 CDS 48481432 48482373 48481432 ID=Msa0887280-mRNA-1:cds;Parent=Msa0887280-mRNA-1
chr6_1 CDS 48479058 48479681 48479058 ID=Msa0887280-mRNA-1:cds;Parent=Msa0887280-mRNA-1
chr6_1 three_prime_UTR 48479004 48479057 48479004 ID=Msa0887280-mRNA-1:three_prime_utr;Parent=Msa0887280-mRNA-1
Gene Sequence

>Msa0887280

ATGGATTTCTCTCAAAACACAATTGCAATTGGCCTCCTTTCAACAATCTTTCTCTTCATAATTCTATTCTACCACTCCAAATCCAACAAAACCAAACAACCCCCAATGGTTGCTGGTGCATGGCCAATAATTGGCCATCTTCCCCTCTTTAGCAAATCTCAAGCAACTCATCATCTTCTAGGTACCATGGCAGACAAATATGGTCCTATTTTCACCATCAAACTCGGCACCGCAACAACTCTAGTCATAAACAATTGGAAAACAGCAAAAGAATGCTACACAACAAATGATATAGCTGTAGCTTATCGTCCAAACCTCGTTGCCTTCGAACACATGACATATAATTATGCCATGCTTGGTTTTGCACCTTACGGTCCCTTTTGGCGCGAAATGAGGAAGATCGTTACGCTAAATTTTCTCTCAAACCATCAAATCAATCTATTAACTCACATTCGTGTCTCCGAAATTCAAACTTCGATTAAAGAGCTATATAATTTTTGGAAAAATAGGAAAGATGAAAATGGTTATTTGTTAGTGGAGATGAAGAAATGGTTTAATGAGTTGGCTTTTAATATAGTTCTTAGAATGGTTGCTGGGAAAAGATACTTTGGGGAGAGTGTGATGGTTAAAGAGGAAGAAGCAAATAGGTGTTTGAATGCTTTAAGGGATTATATGCGTTTGATTGGTGTGTTTCCTATTGCTGATGCTGTTCCTTTTTTGAGATGGTTTGATTTTGGTGGACATGAGAAGAATATGAAGCAAAATTTTAAGGAGTTGGATGGTGTTATCACAGAGTGGTTGGATGAGCACAAGAAGAAGAGGAGTGAAGGTGTTGATAAGAGTAAAGAGGATCAAGATTTCATAGATGTGATGCTTTCTACTATTGATGGAACAAACATTCATGGGTTTGATTCGGATACTGTCATCGAAGCCACAACAATGGCACTAGTTCTGGGAGCAACAGACACTAGCAGTGTTACACACATATGGGCATTGTGTTTATTATTGAACAATCCTCATACATTGGAAAAAGTTAAAGAAGAAATTGATCTCCACATTGGCAAAGAGAGATTATGCATCACTGAGTCCGATATTAACAAGTTGGTATACCTTCAAGCTGTTGTCAAAGAAACACTAAGGTTGTATCCAGCATCACCTCTATCCGGAATACGCGAGTTCAGAGAAGATTGTCGGATTGGTGGCTACCATGTGAAGAAAGGATCTCGACTATTCACGAACTTGTGGAAGATCCAAACCGATCCTAGTGTTTGGCCAGATCCATTGGAGTTCAAGCCTGAGAGATTTCTTACTACTCATAAAGATGTTGATGTTAGAGGTAATCATTTTGAGCTTTTACCATTTGGAAGTGGAAGAAGGAATTGTCCTGGAATATCCTTTGCCCTTCGAAGTGCATATTTAACTCTTGCAAATTTTCTTCACTCCTTTGAAGTCTTGAAAACATCAAGTGAGCCAATTGATATGACTTCTGTGGTGGAAACAACCAACATCAAAGTTACTCCTCTTGAAGTTCTCATCAAACCTCGTTTGTCTCCCAATTATTATTAA
Protein sequence

>Msa0887280

MDFSQNTIAIGLLSTIFLFIILFYHSKSNKTKQPPMVAGAWPIIGHLPLFSKSQATHHLLGTMADKYGPIFTIKLGTATTLVINNWKTAKECYTTNDIAVAYRPNLVAFEHMTYNYAMLGFAPYGPFWREMRKIVTLNFLSNHQINLLTHIRVSEIQTSIKELYNFWKNRKDENGYLLVEMKKWFNELAFNIVLRMVAGKRYFGESVMVKEEEANRCLNALRDYMRLIGVFPIADAVPFLRWFDFGGHEKNMKQNFKELDGVITEWLDEHKKKRSEGVDKSKEDQDFIDVMLSTIDGTNIHGFDSDTVIEATTMALVLGATDTSSVTHIWALCLLLNNPHTLEKVKEEIDLHIGKERLCITESDINKLVYLQAVVKETLRLYPASPLSGIREFREDCRIGGYHVKKGSRLFTNLWKIQTDPSVWPDPLEFKPERFLTTHKDVDVRGNHFELLPFGSGRRNCPGISFALRSAYLTLANFLHSFEVLKTSSEPIDMTSVVETTNIKVTPLEVLIKPRLSPNYY*