AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1263590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263590 MtrunA17_Chr4g0075021 95.018 281 14 0 1 281 2 282 0.0 547
Msa1263590 MtrunA17_Chr4g0075001 98.000 250 5 0 32 281 16 265 0.0 499
Msa1263590 MtrunA17_Chr4g0075001 46.032 126 64 1 16 137 130 255 2.00e-28 109
Msa1263590 MtrunA17_Chr2g0288571 76.449 276 65 0 6 281 12 287 2.36e-161 449
Msa1263590 MtrunA17_Chr8g0390251 68.478 276 83 1 6 281 76 347 2.46e-142 404
Msa1263590 MtrunA17_Chr6g0486631 61.232 276 103 1 6 281 77 348 5.29e-129 370
Msa1263590 MtrunA17_Chr3g0140091 61.594 276 102 1 6 281 79 350 7.22e-128 367
Msa1263590 MtrunA17_Chr4g0019621 59.761 251 92 2 31 281 7 248 5.43e-110 318
Msa1263590 MtrunA17_Chr4g0019621 50.000 122 56 1 16 137 122 238 4.24e-32 119
Msa1263590 MtrunA17_Chr4g0028391 32.000 150 75 5 18 142 79 226 2.69e-15 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263590 AT1G11840.6 73.498 283 73 1 1 281 40 322 2.10e-158 444
Msa1263590 AT1G11840.4 73.498 283 73 1 1 281 1 283 6.05e-158 441
Msa1263590 AT1G11840.1 73.498 283 73 1 1 281 1 283 6.05e-158 441
Msa1263590 AT1G11840.3 73.498 283 73 1 1 281 1 283 6.05e-158 441
Msa1263590 AT1G11840.2 73.498 283 73 1 1 281 1 283 6.05e-158 441
Msa1263590 AT1G67280.1 67.029 276 87 1 6 281 79 350 8.50e-139 395
Msa1263590 AT1G67280.2 67.293 266 83 1 16 281 1 262 1.35e-133 379
Msa1263590 AT1G11840.5 73.516 219 56 1 1 217 1 219 9.45e-120 342
Msa1263590 AT1G11840.5 41.270 126 70 1 146 271 18 139 3.02e-25 100
Msa1263590 AT1G11840.5 44.048 84 47 0 16 99 148 231 3.73e-17 79.0
Msa1263590 AT1G08110.3 30.714 140 70 4 18 132 30 167 1.48e-12 65.1
Msa1263590 AT1G08110.2 30.714 140 70 4 18 132 30 167 1.48e-12 65.1
Msa1263590 AT1G08110.1 30.714 140 70 4 18 132 30 167 1.48e-12 65.1
Msa1263590 AT1G08110.4 30.769 143 66 5 18 132 80 217 2.55e-12 65.5

Find 96 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCCCATTACTTCAAAT+TGG 0.183454 8_2:+66828845 None:intergenic
CCATCCTTCTGGATCTAAAA+AGG 0.229003 8_2:+66829306 None:intergenic
ATGTTAATTCAACAGCAAAA+TGG 0.266019 8_2:+66832392 None:intergenic
AAAATAGAAGTAATGGATTA+TGG 0.271047 8_2:+66828817 None:intergenic
AAGCGACGGTTGTCTTTCTT+TGG 0.309497 8_2:+66832644 None:intergenic
CTTCGCGTTGGTGATTTAGA+AGG 0.318402 8_2:-66830174 Msa1263590:CDS
CTCTTCACTCCAGTTCCTTC+AGG 0.321852 8_2:+66829129 None:intergenic
AATAGTCTCGCAATGTTTAT+CGG 0.325779 8_2:-66829037 Msa1263590:three_prime_UTR
TTTATTAATTGTTAGATTAT+GGG 0.334646 8_2:-66830501 Msa1263590:intron
TGGTGTCACGGAATACTCTA+AGG 0.339259 8_2:-66829593 Msa1263590:CDS
TTGGAGTTGACATATAATTA+TGG 0.349283 8_2:-66829613 Msa1263590:CDS
ATGCAACCAGGGCCAATTCC+TGG 0.371022 8_2:-66829349 Msa1263590:CDS
CTCATCCCAATTTGAAGTAA+TGG 0.379401 8_2:-66828851 Msa1263590:three_prime_UTR
TCATCCCATTACTTCAAATT+GGG 0.388890 8_2:+66828846 None:intergenic
AAGGGAGGCTGGTCCAGTTC+AGG 0.391742 8_2:-66830295 Msa1263590:CDS
TCATCCCAATTTGAAGTAAT+GGG 0.396500 8_2:-66828850 Msa1263590:three_prime_UTR
GCAGATGGCTGAGATTGATT+TGG 0.397177 8_2:-66832672 Msa1263590:intron
ACAGTTGTCCCACCCTGAAC+TGG 0.400562 8_2:+66830282 None:intergenic
CAGTACACTATTGCTATACT+TGG 0.408650 8_2:-66829664 Msa1263590:CDS
CATACTTAATGGTGCGTTCA+AGG 0.411264 8_2:+66832594 None:intergenic
TACATAGGCTCTGGGCTTGA+AGG 0.411735 8_2:-66829885 Msa1263590:intron
TGTTAATTCAACAGCAAAAT+GGG 0.413274 8_2:+66832393 None:intergenic
GGTCGTGAACTATAGGTCTT+TGG 0.418204 8_2:+66830214 None:intergenic
TATGATGTTGGAGATGGCTT+TGG 0.424364 8_2:-66830469 Msa1263590:CDS
CGAAGCATTATTTGACAGAA+TGG 0.435714 8_2:+66830192 None:intergenic
TTTGTGTTAAGGCCAGGAAT+TGG 0.436059 8_2:+66829337 None:intergenic
AGGAAGTGACCTTTGTGTTA+AGG 0.436766 8_2:+66829326 None:intergenic
TGAAGATTTCCTGAAGGAAC+TGG 0.439430 8_2:-66829138 Msa1263590:CDS
CTTCATGTTGTTTATCGTGT+TGG 0.442764 8_2:-66832620 Msa1263590:CDS
AAGAAATAAGTAGCAGTCCT+AGG 0.447586 8_2:-66829097 Msa1263590:three_prime_UTR
AATATATAACAGATTGCTAT+TGG 0.449282 8_2:-66829442 Msa1263590:intron
TGCATATAAAATAGAAGTAA+TGG 0.453722 8_2:+66828810 None:intergenic
CAGAATGGGTCGTGAACTAT+AGG 0.453922 8_2:+66830207 None:intergenic
GTGAGGGATGTCTGTTGGTA+AGG 0.456656 8_2:+66832825 None:intergenic
GTTGAGCACATTCGTGCTAA+AGG 0.461496 8_2:-66830330 Msa1263590:CDS
GGAAACATCACCTTGTTCTC+AGG 0.463793 8_2:+66829842 None:intergenic
AGGGAGGCTGGTCCAGTTCA+GGG 0.464869 8_2:-66830294 Msa1263590:CDS
GCATTGGCATATTTCTCCTC+AGG 0.482452 8_2:+66832442 None:intergenic
GTGACCTTTGTGTTAAGGCC+AGG 0.488960 8_2:+66829331 None:intergenic
CTCCAAGCTCTTGTGTGACT+AGG 0.490880 8_2:+66829383 None:intergenic
GGGCTTGAAGGTGGTGAGGA+AGG 0.499959 8_2:-66829873 Msa1263590:CDS
TTATTAATTGTTAGATTATG+GGG 0.500456 8_2:-66830500 Msa1263590:intron
AGTGCAAAAGTGTAGCCATC+AGG 0.500981 8_2:+66830240 None:intergenic
AACCTAGTCACACAAGAGCT+TGG 0.504613 8_2:-66829385 Msa1263590:CDS
ATAGTAGATTAACATGCAAA+AGG 0.507245 8_2:+66828938 None:intergenic
TGGCTGAGATTGATTTGGAT+TGG 0.509984 8_2:-66832667 Msa1263590:CDS
CAGTCCTAGGTAGTGAGACT+AGG 0.512406 8_2:-66829084 Msa1263590:three_prime_UTR
GGAAACATCACAAGGGAGGC+TGG 0.514310 8_2:-66830306 Msa1263590:CDS
AACTGTTATTGCCTTTGTGA+AGG 0.515188 8_2:-66830265 Msa1263590:CDS
TTAACACAATAATAAACATA+AGG 0.516713 8_2:+66829010 None:intergenic
TTGGGTATAAAGAGGAGGAC+GGG 0.522658 8_2:-66829645 Msa1263590:CDS
GAAGCATTATTTGACAGAAT+GGG 0.529984 8_2:+66830193 None:intergenic
GCCAAATCCAACAAAAGCAT+TGG 0.540130 8_2:+66832426 None:intergenic
TGCTATACTTGGGTATAAAG+AGG 0.540568 8_2:-66829653 Msa1263590:CDS
GGAGGACGGGGCAACTGTGT+TGG 0.541084 8_2:-66829632 Msa1263590:CDS
TAGTCACACAAGAGCTTGGA+GGG 0.541837 8_2:-66829381 Msa1263590:CDS
ATCATATTTACATAGGCTCT+GGG 0.543253 8_2:-66829893 Msa1263590:intron
TTAAGGCCAGGAATTGGCCC+TGG 0.550152 8_2:+66829343 None:intergenic
AGGCTGGTCCAGTTCAGGGT+GGG 0.552550 8_2:-66830290 Msa1263590:CDS
CTTCAAATTGGGATGAGATG+TGG 0.552703 8_2:+66828857 None:intergenic
GACATATAATTATGGTGTCA+CGG 0.562845 8_2:-66829605 Msa1263590:CDS
CTAGTCACACAAGAGCTTGG+AGG 0.565602 8_2:-66829382 Msa1263590:CDS
GAGGCAGAGAGATGTTCCTG+AGG 0.566560 8_2:-66832458 Msa1263590:CDS
CTCTGGGCTTGAAGGTGGTG+AGG 0.568136 8_2:-66829877 Msa1263590:CDS
GGGGAGATCACTATGCAACC+AGG 0.570329 8_2:-66829361 Msa1263590:CDS
GGGGTGACTTCGTATGATGT+TGG 0.586000 8_2:-66830481 Msa1263590:CDS
GAGGAGTGAGGGATGTCTGT+TGG 0.586604 8_2:+66832820 None:intergenic
ACTTCGTATGATGTTGGAGA+TGG 0.588102 8_2:-66830475 Msa1263590:CDS
ACCACTGAACAGAGGAGTGA+GGG 0.593079 8_2:+66832809 None:intergenic
TCCCTCACTCCTCTGTTCAG+TGG 0.593961 8_2:-66832810 Msa1263590:intron
GGTTGATAATCCTGAGAACA+AGG 0.594442 8_2:-66829852 Msa1263590:intron
TAAGGGAACTGCTTATGCAC+AGG 0.602244 8_2:-66829575 Msa1263590:intron
CAACACGATAAACAACATGA+AGG 0.610027 8_2:+66832621 None:intergenic
ATAGGCTCTGGGCTTGAAGG+TGG 0.613134 8_2:-66829882 Msa1263590:intron
TTATTGTGTTAACTTTCATG+TGG 0.616077 8_2:-66828999 Msa1263590:three_prime_UTR
TGTCAAATAATGCTTCGCGT+TGG 0.616848 8_2:-66830186 Msa1263590:CDS
TGACAATGAAGATTTCCTGA+AGG 0.617117 8_2:-66829144 Msa1263590:CDS
AGTACACTATTGCTATACTT+GGG 0.617674 8_2:-66829663 Msa1263590:CDS
GCCTTTGTGAAGGATCCTGA+TGG 0.627316 8_2:-66830255 Msa1263590:CDS
CTAGCCTAGTCTCACTACCT+AGG 0.627502 8_2:+66829080 None:intergenic
CTAAAGGTGGAAACATCACA+AGG 0.631390 8_2:-66830314 Msa1263590:CDS
GAGCACATTCGTGCTAAAGG+TGG 0.633141 8_2:-66830327 Msa1263590:CDS
GAGGCTGGTCCAGTTCAGGG+TGG 0.633429 8_2:-66830291 Msa1263590:CDS
TGGGTATAAAGAGGAGGACG+GGG 0.637554 8_2:-66829644 Msa1263590:CDS
GGTGTCACGGAATACTCTAA+GGG 0.641151 8_2:-66829592 Msa1263590:CDS
CTTGGGTATAAAGAGGAGGA+CGG 0.651509 8_2:-66829646 Msa1263590:CDS
AAACAACATGAAGGAAGCGA+CGG 0.653747 8_2:+66832630 None:intergenic
AACCACTGAACAGAGGAGTG+AGG 0.662425 8_2:+66832808 None:intergenic
AATTCCTGGCCTTAACACAA+AGG 0.663624 8_2:-66829335 Msa1263590:CDS
GGGAGATCACTATGCAACCA+GGG 0.666646 8_2:-66829360 Msa1263590:CDS
TATACTTGGGTATAAAGAGG+AGG 0.676715 8_2:-66829650 Msa1263590:CDS
AGGTGGAAACATCACAAGGG+AGG 0.685845 8_2:-66830310 Msa1263590:CDS
AGTCACACAAGAGCTTGGAG+GGG 0.702624 8_2:-66829380 Msa1263590:CDS
GTTAACTAACCACTGAACAG+AGG 0.704133 8_2:+66832801 None:intergenic
GCCATCAGGATCCTTCACAA+AGG 0.716733 8_2:+66830254 None:intergenic
TAAAGGTGGAAACATCACAA+GGG 0.778099 8_2:-66830313 Msa1263590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTATTTTTTTTTATT+AGG - chr8_2:66829967-66829986 Msa1263590:intron 0.0%
!!! TATTATTATTTTTTTTTATT+AGG - chr8_2:66829967-66829986 Msa1263590:intron 0.0%
!!! ATTAATTTTAGGATTAATTA+TGG - chr8_2:66829366-66829385 Msa1263590:CDS 10.0%
!!! TTAATTTTAGGATTAATTAT+GGG - chr8_2:66829367-66829386 Msa1263590:CDS 10.0%
!! ATGATATATATAATAAACAA+CGG + chr8_2:66829509-66829528 None:intergenic 10.0%
!!! TTAAACAATCATAATTTTAT+AGG + chr8_2:66829577-66829596 None:intergenic 10.0%
!! TCAATTTATAAAATTTACAT+AGG + chr8_2:66829608-66829627 None:intergenic 10.0%
!!! AAATTGTTTTTTTTTTGTTA+GGG + chr8_2:66829678-66829697 None:intergenic 10.0%
!!! AAAATTGTTTTTTTTTTGTT+AGG + chr8_2:66829679-66829698 None:intergenic 10.0%
!!! TATTATTTTTTTTTATTAGG+AGG - chr8_2:66829970-66829989 Msa1263590:intron 10.0%
!! AAATTAAACAAAATTTATGT+AGG + chr8_2:66830048-66830067 None:intergenic 10.0%
!!! TTTTAAAATATTAATAGAGT+TGG - chr8_2:66830371-66830390 Msa1263590:intron 10.0%
!!! TTTTATTAATTGTTAGATTA+TGG - chr8_2:66831173-66831192 Msa1263590:intron 10.0%
!! TTTATTAATTGTTAGATTAT+GGG - chr8_2:66831174-66831193 Msa1263590:intron 10.0%
!!! TTTATTTTTTTTTTTTGTGT+AGG - chr8_2:66832501-66832520 Msa1263590:intron 10.0%
!!! ATTAATTTTAGGATTAATTA+TGG - chr8_2:66829366-66829385 Msa1263590:CDS 10.0%
!!! TTAATTTTAGGATTAATTAT+GGG - chr8_2:66829367-66829386 Msa1263590:CDS 10.0%
!! ATGATATATATAATAAACAA+CGG + chr8_2:66829509-66829528 None:intergenic 10.0%
!!! TTAAACAATCATAATTTTAT+AGG + chr8_2:66829577-66829596 None:intergenic 10.0%
!! TCAATTTATAAAATTTACAT+AGG + chr8_2:66829608-66829627 None:intergenic 10.0%
!!! AAATTGTTTTTTTTTTGTTA+GGG + chr8_2:66829678-66829697 None:intergenic 10.0%
!!! AAAATTGTTTTTTTTTTGTT+AGG + chr8_2:66829679-66829698 None:intergenic 10.0%
!!! TATTATTTTTTTTTATTAGG+AGG - chr8_2:66829970-66829989 Msa1263590:intron 10.0%
!! AAATTAAACAAAATTTATGT+AGG + chr8_2:66830048-66830067 None:intergenic 10.0%
!!! TTTTAAAATATTAATAGAGT+TGG - chr8_2:66830371-66830390 Msa1263590:intron 10.0%
!!! TTTTATTAATTGTTAGATTA+TGG - chr8_2:66831173-66831192 Msa1263590:intron 10.0%
!! TTTATTAATTGTTAGATTAT+GGG - chr8_2:66831174-66831193 Msa1263590:intron 10.0%
!!! TTTATTTTTTTTTTTTGTGT+AGG - chr8_2:66832501-66832520 Msa1263590:intron 10.0%
!! CATATAAAAAGGAAATTAAA+GGG + chr8_2:66829332-66829351 None:intergenic 15.0%
!! ACATATAAAAAGGAAATTAA+AGG + chr8_2:66829333-66829352 None:intergenic 15.0%
!! GAGAAATAATACATATAAAA+AGG + chr8_2:66829343-66829362 None:intergenic 15.0%
!!! TATTTCTCTTCATTAATTTT+AGG - chr8_2:66829355-66829374 Msa1263590:CDS 15.0%
!! TTCGAAATATTAATAGATTT+GGG + chr8_2:66830142-66830161 None:intergenic 15.0%
!! TTTCGAAATATTAATAGATT+TGG + chr8_2:66830143-66830162 None:intergenic 15.0%
!! ATCATTTGAATTGTATTTAT+TGG - chr8_2:66830630-66830649 Msa1263590:intron 15.0%
!! TAGCAAAAATAAATTGAAAA+AGG + chr8_2:66830928-66830947 None:intergenic 15.0%
!! AGAAAAAAATAGTGATAATA+AGG + chr8_2:66830952-66830971 None:intergenic 15.0%
!! CATTAAATAATTTATGTATG+TGG + chr8_2:66831070-66831089 None:intergenic 15.0%
!! TTATTAATTGTTAGATTATG+GGG - chr8_2:66831175-66831194 Msa1263590:intron 15.0%
!!! TTTGCTTCAATTTTTATTTT+AGG - chr8_2:66831311-66831330 Msa1263590:intron 15.0%
!!! TTTATTTTAGGTTTACAAAT+TGG - chr8_2:66831323-66831342 Msa1263590:intron 15.0%
!! TTAACACAATAATAAACATA+AGG + chr8_2:66832668-66832687 None:intergenic 15.0%
!! CATATAAAAAGGAAATTAAA+GGG + chr8_2:66829332-66829351 None:intergenic 15.0%
!! ACATATAAAAAGGAAATTAA+AGG + chr8_2:66829333-66829352 None:intergenic 15.0%
!! GAGAAATAATACATATAAAA+AGG + chr8_2:66829343-66829362 None:intergenic 15.0%
!!! TATTTCTCTTCATTAATTTT+AGG - chr8_2:66829355-66829374 Msa1263590:CDS 15.0%
!! TTCGAAATATTAATAGATTT+GGG + chr8_2:66830142-66830161 None:intergenic 15.0%
!! TTTCGAAATATTAATAGATT+TGG + chr8_2:66830143-66830162 None:intergenic 15.0%
!! ATCATTTGAATTGTATTTAT+TGG - chr8_2:66830630-66830649 Msa1263590:intron 15.0%
!! TAGCAAAAATAAATTGAAAA+AGG + chr8_2:66830928-66830947 None:intergenic 15.0%
!! AGAAAAAAATAGTGATAATA+AGG + chr8_2:66830952-66830971 None:intergenic 15.0%
!! CATTAAATAATTTATGTATG+TGG + chr8_2:66831070-66831089 None:intergenic 15.0%
!! TTATTAATTGTTAGATTATG+GGG - chr8_2:66831175-66831194 Msa1263590:intron 15.0%
!!! TTTGCTTCAATTTTTATTTT+AGG - chr8_2:66831311-66831330 Msa1263590:intron 15.0%
!!! TTTATTTTAGGTTTACAAAT+TGG - chr8_2:66831323-66831342 Msa1263590:intron 15.0%
!! TTAACACAATAATAAACATA+AGG + chr8_2:66832668-66832687 None:intergenic 15.0%
!! CAAAAGTTAAACATACTTAA+TGG + chr8_2:66829095-66829114 None:intergenic 20.0%
!!! TAATTTAGTTTCACTGTTTT+TGG - chr8_2:66829400-66829419 Msa1263590:CDS 20.0%
!! TCGAAATATTAATAGATTTG+GGG + chr8_2:66830141-66830160 None:intergenic 20.0%
!! ATTCAAATGATAAAAGACTA+GGG + chr8_2:66830621-66830640 None:intergenic 20.0%
!! AATTCAAATGATAAAAGACT+AGG + chr8_2:66830622-66830641 None:intergenic 20.0%
!! ATTGAAAAAGGATATGAAAA+AGG + chr8_2:66830916-66830935 None:intergenic 20.0%
!! ATTAATTGTCTCTTGTAAAT+AGG - chr8_2:66831100-66831119 Msa1263590:intron 20.0%
!!! TACCTTTTCATAAAACTTTA+TGG + chr8_2:66831529-66831548 None:intergenic 20.0%
!! TTAGTTCATAAGTTAAAAAG+TGG - chr8_2:66832123-66832142 Msa1263590:intron 20.0%
!! AATATATAACAGATTGCTAT+TGG - chr8_2:66832233-66832252 Msa1263590:intron 20.0%
!!! AAAATAGAAGTAATGGATTA+TGG + chr8_2:66832861-66832880 None:intergenic 20.0%
!! TGCATATAAAATAGAAGTAA+TGG + chr8_2:66832868-66832887 None:intergenic 20.0%
!! CAAAAGTTAAACATACTTAA+TGG + chr8_2:66829095-66829114 None:intergenic 20.0%
!!! TAATTTAGTTTCACTGTTTT+TGG - chr8_2:66829400-66829419 Msa1263590:CDS 20.0%
!! TCGAAATATTAATAGATTTG+GGG + chr8_2:66830141-66830160 None:intergenic 20.0%
!! ATTCAAATGATAAAAGACTA+GGG + chr8_2:66830621-66830640 None:intergenic 20.0%
!! AATTCAAATGATAAAAGACT+AGG + chr8_2:66830622-66830641 None:intergenic 20.0%
!! ATTGAAAAAGGATATGAAAA+AGG + chr8_2:66830916-66830935 None:intergenic 20.0%
!! ATTAATTGTCTCTTGTAAAT+AGG - chr8_2:66831100-66831119 Msa1263590:intron 20.0%
!!! TACCTTTTCATAAAACTTTA+TGG + chr8_2:66831529-66831548 None:intergenic 20.0%
!! TTAGTTCATAAGTTAAAAAG+TGG - chr8_2:66832123-66832142 Msa1263590:intron 20.0%
!! AATATATAACAGATTGCTAT+TGG - chr8_2:66832233-66832252 Msa1263590:intron 20.0%
!!! AAAATAGAAGTAATGGATTA+TGG + chr8_2:66832861-66832880 None:intergenic 20.0%
!! TGCATATAAAATAGAAGTAA+TGG + chr8_2:66832868-66832887 None:intergenic 20.0%
!!! CATGTTTTTGAGCTTATTTA+TGG - chr8_2:66828917-66828936 Msa1263590:three_prime_UTR 25.0%
!! TTTTGAGCTTATTTATGGTT+TGG - chr8_2:66828922-66828941 Msa1263590:three_prime_UTR 25.0%
! AACACATGCAAAAGTAATTA+AGG + chr8_2:66828983-66829002 None:intergenic 25.0%
! TGTTAATTCAACAGCAAAAT+GGG + chr8_2:66829285-66829304 None:intergenic 25.0%
! ATGTTAATTCAACAGCAAAA+TGG + chr8_2:66829286-66829305 None:intergenic 25.0%
! CCAAAATCAAAATTGTTAAG+GGG + chr8_2:66829655-66829674 None:intergenic 25.0%
! GCCAAAATCAAAATTGTTAA+GGG + chr8_2:66829656-66829675 None:intergenic 25.0%
!! CAGCGTTTTATAAAATTAAG+TGG + chr8_2:66829703-66829722 None:intergenic 25.0%
!! TCTTATTTCCCTAAAGATAA+AGG - chr8_2:66829788-66829807 Msa1263590:intron 25.0%
! CTTATTTCCCTAAAGATAAA+GGG - chr8_2:66829789-66829808 Msa1263590:intron 25.0%
! TTATTTCCCTAAAGATAAAG+GGG - chr8_2:66829790-66829809 Msa1263590:intron 25.0%
!!! AAAAAGCATATTTTCGTTAG+AGG - chr8_2:66829816-66829835 Msa1263590:intron 25.0%
!!! AAAAGCATATTTTCGTTAGA+GGG - chr8_2:66829817-66829836 Msa1263590:intron 25.0%
! TCAAAATAGCATATTTCTCT+TGG - chr8_2:66829840-66829859 Msa1263590:intron 25.0%
!! AATTGAGAAACTTTTGACAA+AGG + chr8_2:66830236-66830255 None:intergenic 25.0%
! TTGTCAAAAGTTTCTCAATT+AGG + chr8_2:66830175-66830194 None:intergenic 25.0%
!! AAAAACTTTTCACAAAGACA+AGG - chr8_2:66830344-66830363 Msa1263590:CDS 25.0%
! AGTAAATTAAACCACCAAAT+TGG + chr8_2:66830430-66830449 None:intergenic 25.0%
!!! ATGTTTTAGTCTAGCAAAAT+AGG - chr8_2:66830663-66830682 Msa1263590:intron 25.0%
!! GAAAAATCGTCTATTTTCTA+AGG - chr8_2:66830695-66830714 Msa1263590:intron 25.0%
!!! TTTTCTAAGGACTTTTTGTA+TGG - chr8_2:66830708-66830727 Msa1263590:intron 25.0%
!! ATTTAACCCCTATTGTTATT+TGG - chr8_2:66830757-66830776 Msa1263590:intron 25.0%
!!! TTTAACCCCTATTGTTATTT+GGG - chr8_2:66830758-66830777 Msa1263590:intron 25.0%
!! ATGGTAATAATTCCCTTTTA+TGG + chr8_2:66830822-66830841 None:intergenic 25.0%
! AAGGGAATTATTACCATAAA+AGG - chr8_2:66830825-66830844 Msa1263590:intron 25.0%
!! TCAAAAACAGTTTCCTTTTA+TGG + chr8_2:66830841-66830860 None:intergenic 25.0%
! AATATGCATTAAACCAAATG+TGG - chr8_2:66831731-66831750 Msa1263590:intron 25.0%
! CTTATGGATCATATTTACAT+AGG - chr8_2:66831775-66831794 Msa1263590:intron 25.0%
! TTGGAGTTGACATATAATTA+TGG - chr8_2:66832062-66832081 Msa1263590:intron 25.0%
! TTATTGTGTTAACTTTCATG+TGG - chr8_2:66832676-66832695 Msa1263590:intron 25.0%
! ATAGTAGATTAACATGCAAA+AGG + chr8_2:66832740-66832759 None:intergenic 25.0%
!!! CATGTTTTTGAGCTTATTTA+TGG - chr8_2:66828917-66828936 Msa1263590:three_prime_UTR 25.0%
!! TTTTGAGCTTATTTATGGTT+TGG - chr8_2:66828922-66828941 Msa1263590:three_prime_UTR 25.0%
! AACACATGCAAAAGTAATTA+AGG + chr8_2:66828983-66829002 None:intergenic 25.0%
! TGTTAATTCAACAGCAAAAT+GGG + chr8_2:66829285-66829304 None:intergenic 25.0%
! ATGTTAATTCAACAGCAAAA+TGG + chr8_2:66829286-66829305 None:intergenic 25.0%
! CCAAAATCAAAATTGTTAAG+GGG + chr8_2:66829655-66829674 None:intergenic 25.0%
! GCCAAAATCAAAATTGTTAA+GGG + chr8_2:66829656-66829675 None:intergenic 25.0%
!! CAGCGTTTTATAAAATTAAG+TGG + chr8_2:66829703-66829722 None:intergenic 25.0%
!! TCTTATTTCCCTAAAGATAA+AGG - chr8_2:66829788-66829807 Msa1263590:intron 25.0%
! CTTATTTCCCTAAAGATAAA+GGG - chr8_2:66829789-66829808 Msa1263590:intron 25.0%
! TTATTTCCCTAAAGATAAAG+GGG - chr8_2:66829790-66829809 Msa1263590:intron 25.0%
!!! AAAAAGCATATTTTCGTTAG+AGG - chr8_2:66829816-66829835 Msa1263590:intron 25.0%
!!! AAAAGCATATTTTCGTTAGA+GGG - chr8_2:66829817-66829836 Msa1263590:intron 25.0%
! TCAAAATAGCATATTTCTCT+TGG - chr8_2:66829840-66829859 Msa1263590:intron 25.0%
!! AATTGAGAAACTTTTGACAA+AGG + chr8_2:66830236-66830255 None:intergenic 25.0%
! TTGTCAAAAGTTTCTCAATT+AGG + chr8_2:66830175-66830194 None:intergenic 25.0%
!! AAAAACTTTTCACAAAGACA+AGG - chr8_2:66830344-66830363 Msa1263590:CDS 25.0%
! AGTAAATTAAACCACCAAAT+TGG + chr8_2:66830430-66830449 None:intergenic 25.0%
!!! ATGTTTTAGTCTAGCAAAAT+AGG - chr8_2:66830663-66830682 Msa1263590:intron 25.0%
!! GAAAAATCGTCTATTTTCTA+AGG - chr8_2:66830695-66830714 Msa1263590:intron 25.0%
!!! TTTTCTAAGGACTTTTTGTA+TGG - chr8_2:66830708-66830727 Msa1263590:intron 25.0%
!! ATTTAACCCCTATTGTTATT+TGG - chr8_2:66830757-66830776 Msa1263590:intron 25.0%
!!! TTTAACCCCTATTGTTATTT+GGG - chr8_2:66830758-66830777 Msa1263590:intron 25.0%
!! ATGGTAATAATTCCCTTTTA+TGG + chr8_2:66830822-66830841 None:intergenic 25.0%
! AAGGGAATTATTACCATAAA+AGG - chr8_2:66830825-66830844 Msa1263590:intron 25.0%
!! TCAAAAACAGTTTCCTTTTA+TGG + chr8_2:66830841-66830860 None:intergenic 25.0%
! AATATGCATTAAACCAAATG+TGG - chr8_2:66831731-66831750 Msa1263590:intron 25.0%
! CTTATGGATCATATTTACAT+AGG - chr8_2:66831775-66831794 Msa1263590:intron 25.0%
! TTGGAGTTGACATATAATTA+TGG - chr8_2:66832062-66832081 Msa1263590:intron 25.0%
! TTATTGTGTTAACTTTCATG+TGG - chr8_2:66832676-66832695 Msa1263590:intron 25.0%
! ATAGTAGATTAACATGCAAA+AGG + chr8_2:66832740-66832759 None:intergenic 25.0%
TGCTTAAAATGCTAATGTCT+TGG - chr8_2:66829146-66829165 Msa1263590:CDS 30.0%
AAATGCTAATGTCTTGGATA+TGG - chr8_2:66829152-66829171 Msa1263590:CDS 30.0%
!!! TTCTTTCAGGTTTTATACTG+AGG - chr8_2:66829175-66829194 Msa1263590:intron 30.0%
! AAATATGCCAATGCTTTTGT+TGG - chr8_2:66829242-66829261 Msa1263590:intron 30.0%
!!! TTAGTTTCACTGTTTTTGGT+TGG - chr8_2:66829404-66829423 Msa1263590:CDS 30.0%
TGCAAATATTTACAGAGTCA+CGG + chr8_2:66829447-66829466 None:intergenic 30.0%
!!! CCCCTTAACAATTTTGATTT+TGG - chr8_2:66829652-66829671 Msa1263590:CDS 30.0%
GGCCAAAATCAAAATTGTTA+AGG + chr8_2:66829657-66829676 None:intergenic 30.0%
! TTTACAAAGAGTTGCGATTT+TGG + chr8_2:66829751-66829770 None:intergenic 30.0%
! TTTTGACCCCTTTATCTTTA+GGG + chr8_2:66829799-66829818 None:intergenic 30.0%
! TTTTTGACCCCTTTATCTTT+AGG + chr8_2:66829800-66829819 None:intergenic 30.0%
TAGGACTATGTGTTAATTCA+AGG + chr8_2:66830029-66830048 None:intergenic 30.0%
TATAAAGACATGGACCAAAT+TGG + chr8_2:66830100-66830119 None:intergenic 30.0%
TGACAAAAACAAAGAGAAAG+AGG + chr8_2:66830304-66830323 None:intergenic 30.0%
TTATAAAGACAGGACCAATT+TGG - chr8_2:66830413-66830432 Msa1263590:intron 30.0%
! TTTTAGTCACTTACACAAGA+TGG - chr8_2:66830498-66830517 Msa1263590:intron 30.0%
TTTAGTCACTTACACAAGAT+GGG - chr8_2:66830499-66830518 Msa1263590:intron 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + chr8_2:66831001-66831020 None:intergenic 30.0%
! GAAGCATTATTTGACAGAAT+GGG + chr8_2:66831485-66831504 None:intergenic 30.0%
!! CGCCATAAAGTTTTATGAAA+AGG - chr8_2:66831524-66831543 Msa1263590:intron 30.0%
ACAATCCAAGACATATTTCT+AGG - chr8_2:66831549-66831568 Msa1263590:intron 30.0%
TTCTTCCTAGAAATATGTCT+TGG + chr8_2:66831557-66831576 None:intergenic 30.0%
ATCATATTTACATAGGCTCT+GGG - chr8_2:66831782-66831801 Msa1263590:intron 30.0%
TAACTACATTGCAAAGAAAG+AGG + chr8_2:66831864-66831883 None:intergenic 30.0%
TCTATGCTTTCTGATTAGAA+TGG + chr8_2:66831914-66831933 None:intergenic 30.0%
AGTACACTATTGCTATACTT+GGG - chr8_2:66832012-66832031 Msa1263590:intron 30.0%
! GACATATAATTATGGTGTCA+CGG - chr8_2:66832070-66832089 Msa1263590:intron 30.0%
ACATGATGTTAGAAACCTAT+AGG + chr8_2:66832482-66832501 None:intergenic 30.0%
!!! TTTTTTTTTTGTGTAGGCGT+TGG - chr8_2:66832507-66832526 Msa1263590:intron 30.0%
AATAGTCTCGCAATGTTTAT+CGG - chr8_2:66832638-66832657 Msa1263590:CDS 30.0%
! TAGTGAGTTTCTTTTAGCAA+TGG - chr8_2:66832793-66832812 Msa1263590:intron 30.0%
! TCATCCCAATTTGAAGTAAT+GGG - chr8_2:66832825-66832844 Msa1263590:five_prime_UTR 30.0%
TCATCCCATTACTTCAAATT+GGG + chr8_2:66832832-66832851 None:intergenic 30.0%
TTCATCCCATTACTTCAAAT+TGG + chr8_2:66832833-66832852 None:intergenic 30.0%
TGCTTAAAATGCTAATGTCT+TGG - chr8_2:66829146-66829165 Msa1263590:CDS 30.0%
AAATGCTAATGTCTTGGATA+TGG - chr8_2:66829152-66829171 Msa1263590:CDS 30.0%
!!! TTCTTTCAGGTTTTATACTG+AGG - chr8_2:66829175-66829194 Msa1263590:intron 30.0%
! AAATATGCCAATGCTTTTGT+TGG - chr8_2:66829242-66829261 Msa1263590:intron 30.0%
!!! TTAGTTTCACTGTTTTTGGT+TGG - chr8_2:66829404-66829423 Msa1263590:CDS 30.0%
TGCAAATATTTACAGAGTCA+CGG + chr8_2:66829447-66829466 None:intergenic 30.0%
!!! CCCCTTAACAATTTTGATTT+TGG - chr8_2:66829652-66829671 Msa1263590:CDS 30.0%
GGCCAAAATCAAAATTGTTA+AGG + chr8_2:66829657-66829676 None:intergenic 30.0%
! TTTACAAAGAGTTGCGATTT+TGG + chr8_2:66829751-66829770 None:intergenic 30.0%
! TTTTGACCCCTTTATCTTTA+GGG + chr8_2:66829799-66829818 None:intergenic 30.0%
! TTTTTGACCCCTTTATCTTT+AGG + chr8_2:66829800-66829819 None:intergenic 30.0%
TAGGACTATGTGTTAATTCA+AGG + chr8_2:66830029-66830048 None:intergenic 30.0%
TATAAAGACATGGACCAAAT+TGG + chr8_2:66830100-66830119 None:intergenic 30.0%
TGACAAAAACAAAGAGAAAG+AGG + chr8_2:66830304-66830323 None:intergenic 30.0%
TTATAAAGACAGGACCAATT+TGG - chr8_2:66830413-66830432 Msa1263590:intron 30.0%
! TTTTAGTCACTTACACAAGA+TGG - chr8_2:66830498-66830517 Msa1263590:intron 30.0%
TTTAGTCACTTACACAAGAT+GGG - chr8_2:66830499-66830518 Msa1263590:intron 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + chr8_2:66831001-66831020 None:intergenic 30.0%
! GAAGCATTATTTGACAGAAT+GGG + chr8_2:66831485-66831504 None:intergenic 30.0%
!! CGCCATAAAGTTTTATGAAA+AGG - chr8_2:66831524-66831543 Msa1263590:intron 30.0%
ACAATCCAAGACATATTTCT+AGG - chr8_2:66831549-66831568 Msa1263590:intron 30.0%
TTCTTCCTAGAAATATGTCT+TGG + chr8_2:66831557-66831576 None:intergenic 30.0%
ATCATATTTACATAGGCTCT+GGG - chr8_2:66831782-66831801 Msa1263590:intron 30.0%
TAACTACATTGCAAAGAAAG+AGG + chr8_2:66831864-66831883 None:intergenic 30.0%
TCTATGCTTTCTGATTAGAA+TGG + chr8_2:66831914-66831933 None:intergenic 30.0%
AGTACACTATTGCTATACTT+GGG - chr8_2:66832012-66832031 Msa1263590:intron 30.0%
! GACATATAATTATGGTGTCA+CGG - chr8_2:66832070-66832089 Msa1263590:intron 30.0%
ACATGATGTTAGAAACCTAT+AGG + chr8_2:66832482-66832501 None:intergenic 30.0%
!!! TTTTTTTTTTGTGTAGGCGT+TGG - chr8_2:66832507-66832526 Msa1263590:intron 30.0%
AATAGTCTCGCAATGTTTAT+CGG - chr8_2:66832638-66832657 Msa1263590:CDS 30.0%
! TAGTGAGTTTCTTTTAGCAA+TGG - chr8_2:66832793-66832812 Msa1263590:intron 30.0%
! TCATCCCAATTTGAAGTAAT+GGG - chr8_2:66832825-66832844 Msa1263590:five_prime_UTR 30.0%
TCATCCCATTACTTCAAATT+GGG + chr8_2:66832832-66832851 None:intergenic 30.0%
TTCATCCCATTACTTCAAAT+TGG + chr8_2:66832833-66832852 None:intergenic 30.0%
CAAAAACATGCAATCAGCAA+AGG + chr8_2:66828907-66828926 None:intergenic 35.0%
CAACACGATAAACAACATGA+AGG + chr8_2:66829057-66829076 None:intergenic 35.0%
! CTTCATGTTGTTTATCGTGT+TGG - chr8_2:66829055-66829074 Msa1263590:three_prime_UTR 35.0%
GTGACTCTGTAAATATTTGC+AGG - chr8_2:66829446-66829465 Msa1263590:intron 35.0%
! GTGCATTTCTCTAAAGATAG+AGG - chr8_2:66829941-66829960 Msa1263590:intron 35.0%
! TTTTAGTCCCCTATTTTGCT+TGG - chr8_2:66830065-66830084 Msa1263590:intron 35.0%
GAGAGTCACTTATAAAGACA+TGG + chr8_2:66830110-66830129 None:intergenic 35.0%
! AGAAACTTTTGACAAAGGCA+TGG + chr8_2:66830170-66830189 None:intergenic 35.0%
GTGACAAAAACATAGAGACA+AGG + chr8_2:66830202-66830221 None:intergenic 35.0%
TGAGAGTGACTTATAAAGAC+AGG - chr8_2:66830403-66830422 Msa1263590:intron 35.0%
CAAAACTCATACACTAAGTG+CGG - chr8_2:66830543-66830562 Msa1263590:intron 35.0%
! CCTTTTATGGTATGCTTAAC+CGG + chr8_2:66830809-66830828 None:intergenic 35.0%
CGGTTAAGCATACCATAAAA+GGG - chr8_2:66830807-66830826 Msa1263590:intron 35.0%
TTGTCTCTTGTAAATAGGAC+CGG - chr8_2:66831105-66831124 Msa1263590:intron 35.0%
TTCAAAGTAAATACTCCCTC+CGG + chr8_2:66831127-66831146 None:intergenic 35.0%
TAAAGGTGGAAACATCACAA+GGG - chr8_2:66831362-66831381 Msa1263590:intron 35.0%
AACTGTTATTGCCTTTGTGA+AGG - chr8_2:66831410-66831429 Msa1263590:intron 35.0%
! CGAAGCATTATTTGACAGAA+TGG + chr8_2:66831486-66831505 None:intergenic 35.0%
CTCGGTTAATAAACCACATT+TGG + chr8_2:66831747-66831766 None:intergenic 35.0%
CAAATGTGGTTTATTAACCG+AGG - chr8_2:66831745-66831764 Msa1263590:intron 35.0%
GATCATATTTACATAGGCTC+TGG - chr8_2:66831781-66831800 Msa1263590:intron 35.0%
GTATAGCAATAGTGTACTGT+AGG + chr8_2:66832010-66832029 None:intergenic 35.0%
CAGTACACTATTGCTATACT+TGG - chr8_2:66832011-66832030 Msa1263590:intron 35.0%
TGCTATACTTGGGTATAAAG+AGG - chr8_2:66832022-66832041 Msa1263590:intron 35.0%
TATACTTGGGTATAAAGAGG+AGG - chr8_2:66832025-66832044 Msa1263590:intron 35.0%
! ACTTCCTTTTTAGATCCAGA+AGG - chr8_2:66832365-66832384 Msa1263590:intron 35.0%
! GCATTGATGCATTTGTAATG+TGG + chr8_2:66832460-66832479 None:intergenic 35.0%
ACAAATGCATCAATGCCTAT+AGG - chr8_2:66832464-66832483 Msa1263590:CDS 35.0%
TGACAATGAAGATTTCCTGA+AGG - chr8_2:66832531-66832550 Msa1263590:intron 35.0%
AAGAAATAAGTAGCAGTCCT+AGG - chr8_2:66832578-66832597 Msa1263590:intron 35.0%
! CTCATCCCAATTTGAAGTAA+TGG - chr8_2:66832824-66832843 Msa1263590:five_prime_UTR 35.0%
CAAAAACATGCAATCAGCAA+AGG + chr8_2:66828907-66828926 None:intergenic 35.0%
CAACACGATAAACAACATGA+AGG + chr8_2:66829057-66829076 None:intergenic 35.0%
! CTTCATGTTGTTTATCGTGT+TGG - chr8_2:66829055-66829074 Msa1263590:three_prime_UTR 35.0%
GTGACTCTGTAAATATTTGC+AGG - chr8_2:66829446-66829465 Msa1263590:intron 35.0%
! GTGCATTTCTCTAAAGATAG+AGG - chr8_2:66829941-66829960 Msa1263590:intron 35.0%
! TTTTAGTCCCCTATTTTGCT+TGG - chr8_2:66830065-66830084 Msa1263590:intron 35.0%
GAGAGTCACTTATAAAGACA+TGG + chr8_2:66830110-66830129 None:intergenic 35.0%
! AGAAACTTTTGACAAAGGCA+TGG + chr8_2:66830170-66830189 None:intergenic 35.0%
GTGACAAAAACATAGAGACA+AGG + chr8_2:66830202-66830221 None:intergenic 35.0%
TGAGAGTGACTTATAAAGAC+AGG - chr8_2:66830403-66830422 Msa1263590:intron 35.0%
CAAAACTCATACACTAAGTG+CGG - chr8_2:66830543-66830562 Msa1263590:intron 35.0%
! CCTTTTATGGTATGCTTAAC+CGG + chr8_2:66830809-66830828 None:intergenic 35.0%
CGGTTAAGCATACCATAAAA+GGG - chr8_2:66830807-66830826 Msa1263590:intron 35.0%
TTGTCTCTTGTAAATAGGAC+CGG - chr8_2:66831105-66831124 Msa1263590:intron 35.0%
TTCAAAGTAAATACTCCCTC+CGG + chr8_2:66831127-66831146 None:intergenic 35.0%
TAAAGGTGGAAACATCACAA+GGG - chr8_2:66831362-66831381 Msa1263590:intron 35.0%
AACTGTTATTGCCTTTGTGA+AGG - chr8_2:66831410-66831429 Msa1263590:intron 35.0%
! CGAAGCATTATTTGACAGAA+TGG + chr8_2:66831486-66831505 None:intergenic 35.0%
CTCGGTTAATAAACCACATT+TGG + chr8_2:66831747-66831766 None:intergenic 35.0%
CAAATGTGGTTTATTAACCG+AGG - chr8_2:66831745-66831764 Msa1263590:intron 35.0%
GATCATATTTACATAGGCTC+TGG - chr8_2:66831781-66831800 Msa1263590:intron 35.0%
GTATAGCAATAGTGTACTGT+AGG + chr8_2:66832010-66832029 None:intergenic 35.0%
CAGTACACTATTGCTATACT+TGG - chr8_2:66832011-66832030 Msa1263590:intron 35.0%
TGCTATACTTGGGTATAAAG+AGG - chr8_2:66832022-66832041 Msa1263590:intron 35.0%
TATACTTGGGTATAAAGAGG+AGG - chr8_2:66832025-66832044 Msa1263590:intron 35.0%
! ACTTCCTTTTTAGATCCAGA+AGG - chr8_2:66832365-66832384 Msa1263590:intron 35.0%
! GCATTGATGCATTTGTAATG+TGG + chr8_2:66832460-66832479 None:intergenic 35.0%
ACAAATGCATCAATGCCTAT+AGG - chr8_2:66832464-66832483 Msa1263590:CDS 35.0%
TGACAATGAAGATTTCCTGA+AGG - chr8_2:66832531-66832550 Msa1263590:intron 35.0%
AAGAAATAAGTAGCAGTCCT+AGG - chr8_2:66832578-66832597 Msa1263590:intron 35.0%
! CTCATCCCAATTTGAAGTAA+TGG - chr8_2:66832824-66832843 Msa1263590:five_prime_UTR 35.0%
GTTAACTAACCACTGAACAG+AGG + chr8_2:66828877-66828896 None:intergenic 40.0%
ATGCAATCAGCAAAGGCAAA+CGG + chr8_2:66828900-66828919 None:intergenic 40.0%
! ACTTTTGCATGTGTTGCAGA+TGG - chr8_2:66828988-66829007 Msa1263590:three_prime_UTR 40.0%
!! TGGCTGAGATTGATTTGGAT+TGG - chr8_2:66829008-66829027 Msa1263590:three_prime_UTR 40.0%
AAACAACATGAAGGAAGCGA+CGG + chr8_2:66829048-66829067 None:intergenic 40.0%
CATACTTAATGGTGCGTTCA+AGG + chr8_2:66829084-66829103 None:intergenic 40.0%
GTCTTGGATATGGTTCTTTC+AGG - chr8_2:66829162-66829181 Msa1263590:intron 40.0%
!! AGGTTTTATACTGAGGCTCT+TGG - chr8_2:66829182-66829201 Msa1263590:intron 40.0%
!! GGTTTTATACTGAGGCTCTT+GGG - chr8_2:66829183-66829202 Msa1263590:intron 40.0%
! CTCTTGGGATGAAACTTTTG+AGG - chr8_2:66829198-66829217 Msa1263590:intron 40.0%
! GCCAATGCTTTTGTTGGATT+TGG - chr8_2:66829248-66829267 Msa1263590:intron 40.0%
! GCCAAATCCAACAAAAGCAT+TGG + chr8_2:66829252-66829271 None:intergenic 40.0%
!! TTGGTTGGTGCTTTTAACTG+TGG - chr8_2:66829419-66829438 Msa1263590:CDS 40.0%
!! TGGTTGGTGCTTTTAACTGT+GGG - chr8_2:66829420-66829439 Msa1263590:CDS 40.0%
AAAGTTGCTGAGAAGAACAG+AGG - chr8_2:66829724-66829743 Msa1263590:intron 40.0%
AAGTTGCTGAGAAGAACAGA+GGG - chr8_2:66829725-66829744 Msa1263590:intron 40.0%
AGAAACTCTCTTCAACCTCA+AGG + chr8_2:66829887-66829906 None:intergenic 40.0%
CTCTCAGCCAAATGAATTCA+CGG - chr8_2:66829905-66829924 Msa1263590:intron 40.0%
TCTCAGCCAAATGAATTCAC+GGG - chr8_2:66829906-66829925 Msa1263590:intron 40.0%
! CAGCTTTCTCGTTGCAATTT+TGG + chr8_2:66829996-66830015 None:intergenic 40.0%
GTTTGCTCCAAGCAAAATAG+GGG + chr8_2:66830075-66830094 None:intergenic 40.0%
! GGTTTGCTCCAAGCAAAATA+GGG + chr8_2:66830076-66830095 None:intergenic 40.0%
!! TGGTTTGCTCCAAGCAAAAT+AGG + chr8_2:66830077-66830096 None:intergenic 40.0%
AAAGACATGGACCAAATTGG+TGG + chr8_2:66830097-66830116 None:intergenic 40.0%
TAAAGACAGGACCAATTTGG+TGG - chr8_2:66830416-66830435 Msa1263590:intron 40.0%
ATACACTAAGTGCGGAGAAA+TGG - chr8_2:66830551-66830570 Msa1263590:intron 40.0%
ATTTGATCTGTTAGAGGAGC+AGG + chr8_2:66830594-66830613 None:intergenic 40.0%
GGTGACATTTGATCTGTTAG+AGG + chr8_2:66830600-66830619 None:intergenic 40.0%
GAGGACCCAAATAACAATAG+GGG + chr8_2:66830766-66830785 None:intergenic 40.0%
GGAGGACCCAAATAACAATA+GGG + chr8_2:66830767-66830786 None:intergenic 40.0%
AGGAGGACCCAAATAACAAT+AGG + chr8_2:66830768-66830787 None:intergenic 40.0%
CCGGTTAAGCATACCATAAA+AGG - chr8_2:66830806-66830825 Msa1263590:intron 40.0%
CTACATGAATTTACTCCCTC+AGG - chr8_2:66830974-66830993 Msa1263590:intron 40.0%
CTCTTGTAAATAGGACCTGA+GGG + chr8_2:66830992-66831011 None:intergenic 40.0%
TCTCTTGTAAATAGGACCTG+AGG + chr8_2:66830993-66831012 None:intergenic 40.0%
ACTTCGTATGATGTTGGAGA+TGG - chr8_2:66831200-66831219 Msa1263590:intron 40.0%
TATGATGTTGGAGATGGCTT+TGG - chr8_2:66831206-66831225 Msa1263590:intron 40.0%
CTAAAGGTGGAAACATCACA+AGG - chr8_2:66831361-66831380 Msa1263590:intron 40.0%
TGTCAAATAATGCTTCGCGT+TGG - chr8_2:66831489-66831508 Msa1263590:intron 40.0%
TAACCGAGGCTATGTTCTTA+TGG - chr8_2:66831759-66831778 Msa1263590:intron 40.0%
GATCCATAAGAACATAGCCT+CGG + chr8_2:66831765-66831784 None:intergenic 40.0%
!! GGTTGATAATCCTGAGAACA+AGG - chr8_2:66831823-66831842 Msa1263590:intron 40.0%
! ATTGCAAAGAAAGAGGCATG+AGG + chr8_2:66831857-66831876 None:intergenic 40.0%
GAAAGCTAGTTCAAGCTTCA+AGG + chr8_2:66832186-66832205 None:intergenic 40.0%
TTTGTGTTAAGGCCAGGAAT+TGG + chr8_2:66832341-66832360 None:intergenic 40.0%
!! AATTCCTGGCCTTAACACAA+AGG - chr8_2:66832340-66832359 Msa1263590:intron 40.0%
AGGAAGTGACCTTTGTGTTA+AGG + chr8_2:66832352-66832371 None:intergenic 40.0%
CCATCCTTCTGGATCTAAAA+AGG + chr8_2:66832372-66832391 None:intergenic 40.0%
! CCTTTTTAGATCCAGAAGGA+TGG - chr8_2:66832369-66832388 Msa1263590:intron 40.0%
! CTTACAGTTTTCCATCCTTC+TGG + chr8_2:66832383-66832402 None:intergenic 40.0%
!! TAAGGTTTTGTACGGGAGTT+TGG + chr8_2:66832418-66832437 None:intergenic 40.0%
TGAAGATTTCCTGAAGGAAC+TGG - chr8_2:66832537-66832556 Msa1263590:intron 40.0%
CTTCAAATTGGGATGAGATG+TGG + chr8_2:66832821-66832840 None:intergenic 40.0%
GTTAACTAACCACTGAACAG+AGG + chr8_2:66828877-66828896 None:intergenic 40.0%
ATGCAATCAGCAAAGGCAAA+CGG + chr8_2:66828900-66828919 None:intergenic 40.0%
! ACTTTTGCATGTGTTGCAGA+TGG - chr8_2:66828988-66829007 Msa1263590:three_prime_UTR 40.0%
!! TGGCTGAGATTGATTTGGAT+TGG - chr8_2:66829008-66829027 Msa1263590:three_prime_UTR 40.0%
AAACAACATGAAGGAAGCGA+CGG + chr8_2:66829048-66829067 None:intergenic 40.0%
CATACTTAATGGTGCGTTCA+AGG + chr8_2:66829084-66829103 None:intergenic 40.0%
GTCTTGGATATGGTTCTTTC+AGG - chr8_2:66829162-66829181 Msa1263590:intron 40.0%
!! AGGTTTTATACTGAGGCTCT+TGG - chr8_2:66829182-66829201 Msa1263590:intron 40.0%
!! GGTTTTATACTGAGGCTCTT+GGG - chr8_2:66829183-66829202 Msa1263590:intron 40.0%
! CTCTTGGGATGAAACTTTTG+AGG - chr8_2:66829198-66829217 Msa1263590:intron 40.0%
! GCCAATGCTTTTGTTGGATT+TGG - chr8_2:66829248-66829267 Msa1263590:intron 40.0%
! GCCAAATCCAACAAAAGCAT+TGG + chr8_2:66829252-66829271 None:intergenic 40.0%
!! TTGGTTGGTGCTTTTAACTG+TGG - chr8_2:66829419-66829438 Msa1263590:CDS 40.0%
!! TGGTTGGTGCTTTTAACTGT+GGG - chr8_2:66829420-66829439 Msa1263590:CDS 40.0%
AAAGTTGCTGAGAAGAACAG+AGG - chr8_2:66829724-66829743 Msa1263590:intron 40.0%
AAGTTGCTGAGAAGAACAGA+GGG - chr8_2:66829725-66829744 Msa1263590:intron 40.0%
AGAAACTCTCTTCAACCTCA+AGG + chr8_2:66829887-66829906 None:intergenic 40.0%
CTCTCAGCCAAATGAATTCA+CGG - chr8_2:66829905-66829924 Msa1263590:intron 40.0%
TCTCAGCCAAATGAATTCAC+GGG - chr8_2:66829906-66829925 Msa1263590:intron 40.0%
! CAGCTTTCTCGTTGCAATTT+TGG + chr8_2:66829996-66830015 None:intergenic 40.0%
GTTTGCTCCAAGCAAAATAG+GGG + chr8_2:66830075-66830094 None:intergenic 40.0%
! GGTTTGCTCCAAGCAAAATA+GGG + chr8_2:66830076-66830095 None:intergenic 40.0%
!! TGGTTTGCTCCAAGCAAAAT+AGG + chr8_2:66830077-66830096 None:intergenic 40.0%
AAAGACATGGACCAAATTGG+TGG + chr8_2:66830097-66830116 None:intergenic 40.0%
TAAAGACAGGACCAATTTGG+TGG - chr8_2:66830416-66830435 Msa1263590:intron 40.0%
ATACACTAAGTGCGGAGAAA+TGG - chr8_2:66830551-66830570 Msa1263590:intron 40.0%
ATTTGATCTGTTAGAGGAGC+AGG + chr8_2:66830594-66830613 None:intergenic 40.0%
GGTGACATTTGATCTGTTAG+AGG + chr8_2:66830600-66830619 None:intergenic 40.0%
GAGGACCCAAATAACAATAG+GGG + chr8_2:66830766-66830785 None:intergenic 40.0%
GGAGGACCCAAATAACAATA+GGG + chr8_2:66830767-66830786 None:intergenic 40.0%
AGGAGGACCCAAATAACAAT+AGG + chr8_2:66830768-66830787 None:intergenic 40.0%
CCGGTTAAGCATACCATAAA+AGG - chr8_2:66830806-66830825 Msa1263590:intron 40.0%
CTACATGAATTTACTCCCTC+AGG - chr8_2:66830974-66830993 Msa1263590:intron 40.0%
CTCTTGTAAATAGGACCTGA+GGG + chr8_2:66830992-66831011 None:intergenic 40.0%
TCTCTTGTAAATAGGACCTG+AGG + chr8_2:66830993-66831012 None:intergenic 40.0%
ACTTCGTATGATGTTGGAGA+TGG - chr8_2:66831200-66831219 Msa1263590:intron 40.0%
TATGATGTTGGAGATGGCTT+TGG - chr8_2:66831206-66831225 Msa1263590:intron 40.0%
CTAAAGGTGGAAACATCACA+AGG - chr8_2:66831361-66831380 Msa1263590:intron 40.0%
TGTCAAATAATGCTTCGCGT+TGG - chr8_2:66831489-66831508 Msa1263590:intron 40.0%
TAACCGAGGCTATGTTCTTA+TGG - chr8_2:66831759-66831778 Msa1263590:intron 40.0%
GATCCATAAGAACATAGCCT+CGG + chr8_2:66831765-66831784 None:intergenic 40.0%
!! GGTTGATAATCCTGAGAACA+AGG - chr8_2:66831823-66831842 Msa1263590:intron 40.0%
! ATTGCAAAGAAAGAGGCATG+AGG + chr8_2:66831857-66831876 None:intergenic 40.0%
GAAAGCTAGTTCAAGCTTCA+AGG + chr8_2:66832186-66832205 None:intergenic 40.0%
TTTGTGTTAAGGCCAGGAAT+TGG + chr8_2:66832341-66832360 None:intergenic 40.0%
!! AATTCCTGGCCTTAACACAA+AGG - chr8_2:66832340-66832359 Msa1263590:intron 40.0%
AGGAAGTGACCTTTGTGTTA+AGG + chr8_2:66832352-66832371 None:intergenic 40.0%
CCATCCTTCTGGATCTAAAA+AGG + chr8_2:66832372-66832391 None:intergenic 40.0%
! CCTTTTTAGATCCAGAAGGA+TGG - chr8_2:66832369-66832388 Msa1263590:intron 40.0%
! CTTACAGTTTTCCATCCTTC+TGG + chr8_2:66832383-66832402 None:intergenic 40.0%
!! TAAGGTTTTGTACGGGAGTT+TGG + chr8_2:66832418-66832437 None:intergenic 40.0%
TGAAGATTTCCTGAAGGAAC+TGG - chr8_2:66832537-66832556 Msa1263590:intron 40.0%
CTTCAAATTGGGATGAGATG+TGG + chr8_2:66832821-66832840 None:intergenic 40.0%
TGCAATCAGCAAAGGCAAAC+GGG + chr8_2:66828899-66828918 None:intergenic 45.0%
GCAGATGGCTGAGATTGATT+TGG - chr8_2:66829003-66829022 Msa1263590:three_prime_UTR 45.0%
AAGCGACGGTTGTCTTTCTT+TGG + chr8_2:66829034-66829053 None:intergenic 45.0%
! GCATTGGCATATTTCTCCTC+AGG + chr8_2:66829236-66829255 None:intergenic 45.0%
ACGGTGAATCATTCCACACA+AGG + chr8_2:66829490-66829509 None:intergenic 45.0%
CTCTTCAACCTCAAGGAACT+CGG + chr8_2:66829880-66829899 None:intergenic 45.0%
CTGTCTCCCGTGAATTCATT+TGG + chr8_2:66829915-66829934 None:intergenic 45.0%
CTTGGAGCAAACCACCAATT+TGG - chr8_2:66830083-66830102 Msa1263590:intron 45.0%
GTTATTTGGGTCCTCCTAAC+CGG - chr8_2:66830771-66830790 Msa1263590:intron 45.0%
TCTCTTGTAAATAGGACCGG+AGG - chr8_2:66831108-66831127 Msa1263590:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG - chr8_2:66831109-66831128 Msa1263590:intron 45.0%
GTTGAGCACATTCGTGCTAA+AGG - chr8_2:66831345-66831364 Msa1263590:intron 45.0%
! AGTGCAAAAGTGTAGCCATC+AGG + chr8_2:66831438-66831457 None:intergenic 45.0%
GGTCGTGAACTATAGGTCTT+TGG + chr8_2:66831464-66831483 None:intergenic 45.0%
CAGAATGGGTCGTGAACTAT+AGG + chr8_2:66831471-66831490 None:intergenic 45.0%
!! CTTCGCGTTGGTGATTTAGA+AGG - chr8_2:66831501-66831520 Msa1263590:intron 45.0%
GGAAACATCACCTTGTTCTC+AGG + chr8_2:66831836-66831855 None:intergenic 45.0%
CTTGGGTATAAAGAGGAGGA+CGG - chr8_2:66832029-66832048 Msa1263590:intron 45.0%
TTGGGTATAAAGAGGAGGAC+GGG - chr8_2:66832030-66832049 Msa1263590:intron 45.0%
!! TGGTGTCACGGAATACTCTA+AGG - chr8_2:66832082-66832101 Msa1263590:intron 45.0%
! GGTGTCACGGAATACTCTAA+GGG - chr8_2:66832083-66832102 Msa1263590:intron 45.0%
TAAGGGAACTGCTTATGCAC+AGG - chr8_2:66832100-66832119 Msa1263590:intron 45.0%
GCTAGTTCAAGCTTCAAGGT+CGG + chr8_2:66832182-66832201 None:intergenic 45.0%
AACCTAGTCACACAAGAGCT+TGG - chr8_2:66832290-66832309 Msa1263590:intron 45.0%
TAGTCACACAAGAGCTTGGA+GGG - chr8_2:66832294-66832313 Msa1263590:intron 45.0%
ACTCCCGTACAAAACCTTAG+TGG - chr8_2:66832419-66832438 Msa1263590:CDS 45.0%
!! CGACCACTAAGGTTTTGTAC+GGG + chr8_2:66832425-66832444 None:intergenic 45.0%
!! CCGACCACTAAGGTTTTGTA+CGG + chr8_2:66832426-66832445 None:intergenic 45.0%
CCGTACAAAACCTTAGTGGT+CGG - chr8_2:66832423-66832442 Msa1263590:CDS 45.0%
ACAAAACCTTAGTGGTCGGT+CGG - chr8_2:66832427-66832446 Msa1263590:CDS 45.0%
TGCAATCAGCAAAGGCAAAC+GGG + chr8_2:66828899-66828918 None:intergenic 45.0%
GCAGATGGCTGAGATTGATT+TGG - chr8_2:66829003-66829022 Msa1263590:three_prime_UTR 45.0%
AAGCGACGGTTGTCTTTCTT+TGG + chr8_2:66829034-66829053 None:intergenic 45.0%
! GCATTGGCATATTTCTCCTC+AGG + chr8_2:66829236-66829255 None:intergenic 45.0%
ACGGTGAATCATTCCACACA+AGG + chr8_2:66829490-66829509 None:intergenic 45.0%
CTCTTCAACCTCAAGGAACT+CGG + chr8_2:66829880-66829899 None:intergenic 45.0%
CTGTCTCCCGTGAATTCATT+TGG + chr8_2:66829915-66829934 None:intergenic 45.0%
CTTGGAGCAAACCACCAATT+TGG - chr8_2:66830083-66830102 Msa1263590:intron 45.0%
GTTATTTGGGTCCTCCTAAC+CGG - chr8_2:66830771-66830790 Msa1263590:intron 45.0%
TCTCTTGTAAATAGGACCGG+AGG - chr8_2:66831108-66831127 Msa1263590:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG - chr8_2:66831109-66831128 Msa1263590:intron 45.0%
GTTGAGCACATTCGTGCTAA+AGG - chr8_2:66831345-66831364 Msa1263590:intron 45.0%
! AGTGCAAAAGTGTAGCCATC+AGG + chr8_2:66831438-66831457 None:intergenic 45.0%
GGTCGTGAACTATAGGTCTT+TGG + chr8_2:66831464-66831483 None:intergenic 45.0%
CAGAATGGGTCGTGAACTAT+AGG + chr8_2:66831471-66831490 None:intergenic 45.0%
!! CTTCGCGTTGGTGATTTAGA+AGG - chr8_2:66831501-66831520 Msa1263590:intron 45.0%
GGAAACATCACCTTGTTCTC+AGG + chr8_2:66831836-66831855 None:intergenic 45.0%
CTTGGGTATAAAGAGGAGGA+CGG - chr8_2:66832029-66832048 Msa1263590:intron 45.0%
TTGGGTATAAAGAGGAGGAC+GGG - chr8_2:66832030-66832049 Msa1263590:intron 45.0%
!! TGGTGTCACGGAATACTCTA+AGG - chr8_2:66832082-66832101 Msa1263590:intron 45.0%
! GGTGTCACGGAATACTCTAA+GGG - chr8_2:66832083-66832102 Msa1263590:intron 45.0%
TAAGGGAACTGCTTATGCAC+AGG - chr8_2:66832100-66832119 Msa1263590:intron 45.0%
GCTAGTTCAAGCTTCAAGGT+CGG + chr8_2:66832182-66832201 None:intergenic 45.0%
AACCTAGTCACACAAGAGCT+TGG - chr8_2:66832290-66832309 Msa1263590:intron 45.0%
TAGTCACACAAGAGCTTGGA+GGG - chr8_2:66832294-66832313 Msa1263590:intron 45.0%
ACTCCCGTACAAAACCTTAG+TGG - chr8_2:66832419-66832438 Msa1263590:CDS 45.0%
!! CGACCACTAAGGTTTTGTAC+GGG + chr8_2:66832425-66832444 None:intergenic 45.0%
!! CCGACCACTAAGGTTTTGTA+CGG + chr8_2:66832426-66832445 None:intergenic 45.0%
CCGTACAAAACCTTAGTGGT+CGG - chr8_2:66832423-66832442 Msa1263590:CDS 45.0%
ACAAAACCTTAGTGGTCGGT+CGG - chr8_2:66832427-66832446 Msa1263590:CDS 45.0%
!!! ATTTTTATTTGTTAAAAAAA+AGG - chr8_2:66829527-66829546 Msa1263590:intron 5.0%
!!! ATTAATTATGTTTTTATTTT+AGG - chr8_2:66829550-66829569 Msa1263590:intron 5.0%
!!! AAATTTTATAAATTGAATTA+AGG - chr8_2:66829612-66829631 Msa1263590:CDS 5.0%
!!! ATTTTTATTTGTTAAAAAAA+AGG - chr8_2:66829527-66829546 Msa1263590:intron 5.0%
!!! ATTAATTATGTTTTTATTTT+AGG - chr8_2:66829550-66829569 Msa1263590:intron 5.0%
!!! AAATTTTATAAATTGAATTA+AGG - chr8_2:66829612-66829631 Msa1263590:CDS 5.0%
GTGAGGGATGTCTGTTGGTA+AGG + chr8_2:66828853-66828872 None:intergenic 50.0%
ACCACTGAACAGAGGAGTGA+GGG + chr8_2:66828869-66828888 None:intergenic 50.0%
AACCACTGAACAGAGGAGTG+AGG + chr8_2:66828870-66828889 None:intergenic 50.0%
CTCTTTCTGCACACCTTGTG+TGG - chr8_2:66829474-66829493 Msa1263590:intron 50.0%
GGGGTGACTTCGTATGATGT+TGG - chr8_2:66831194-66831213 Msa1263590:intron 50.0%
GAGCACATTCGTGCTAAAGG+TGG - chr8_2:66831348-66831367 Msa1263590:intron 50.0%
AGGTGGAAACATCACAAGGG+AGG - chr8_2:66831365-66831384 Msa1263590:intron 50.0%
GCCTTTGTGAAGGATCCTGA+TGG - chr8_2:66831420-66831439 Msa1263590:intron 50.0%
GCCATCAGGATCCTTCACAA+AGG + chr8_2:66831424-66831443 None:intergenic 50.0%
!! TACATAGGCTCTGGGCTTGA+AGG - chr8_2:66831790-66831809 Msa1263590:intron 50.0%
TGGGTATAAAGAGGAGGACG+GGG - chr8_2:66832031-66832050 Msa1263590:intron 50.0%
CTCCAAGCTCTTGTGTGACT+AGG + chr8_2:66832295-66832314 None:intergenic 50.0%
CTAGTCACACAAGAGCTTGG+AGG - chr8_2:66832293-66832312 Msa1263590:intron 50.0%
AGTCACACAAGAGCTTGGAG+GGG - chr8_2:66832295-66832314 Msa1263590:intron 50.0%
GGGAGATCACTATGCAACCA+GGG - chr8_2:66832315-66832334 Msa1263590:intron 50.0%
GTGACCTTTGTGTTAAGGCC+AGG + chr8_2:66832347-66832366 None:intergenic 50.0%
!! GGTTTTGTACGGGAGTTTGG+AGG + chr8_2:66832415-66832434 None:intergenic 50.0%
CTCTTCACTCCAGTTCCTTC+AGG + chr8_2:66832549-66832568 None:intergenic 50.0%
CAGTCCTAGGTAGTGAGACT+AGG - chr8_2:66832591-66832610 Msa1263590:intron 50.0%
CTAGCCTAGTCTCACTACCT+AGG + chr8_2:66832598-66832617 None:intergenic 50.0%
GTGAGGGATGTCTGTTGGTA+AGG + chr8_2:66828853-66828872 None:intergenic 50.0%
ACCACTGAACAGAGGAGTGA+GGG + chr8_2:66828869-66828888 None:intergenic 50.0%
AACCACTGAACAGAGGAGTG+AGG + chr8_2:66828870-66828889 None:intergenic 50.0%
CTCTTTCTGCACACCTTGTG+TGG - chr8_2:66829474-66829493 Msa1263590:intron 50.0%
GGGGTGACTTCGTATGATGT+TGG - chr8_2:66831194-66831213 Msa1263590:intron 50.0%
GAGCACATTCGTGCTAAAGG+TGG - chr8_2:66831348-66831367 Msa1263590:intron 50.0%
AGGTGGAAACATCACAAGGG+AGG - chr8_2:66831365-66831384 Msa1263590:intron 50.0%
GCCTTTGTGAAGGATCCTGA+TGG - chr8_2:66831420-66831439 Msa1263590:intron 50.0%
GCCATCAGGATCCTTCACAA+AGG + chr8_2:66831424-66831443 None:intergenic 50.0%
!! TACATAGGCTCTGGGCTTGA+AGG - chr8_2:66831790-66831809 Msa1263590:intron 50.0%
TGGGTATAAAGAGGAGGACG+GGG - chr8_2:66832031-66832050 Msa1263590:intron 50.0%
CTCCAAGCTCTTGTGTGACT+AGG + chr8_2:66832295-66832314 None:intergenic 50.0%
CTAGTCACACAAGAGCTTGG+AGG - chr8_2:66832293-66832312 Msa1263590:intron 50.0%
AGTCACACAAGAGCTTGGAG+GGG - chr8_2:66832295-66832314 Msa1263590:intron 50.0%
GGGAGATCACTATGCAACCA+GGG - chr8_2:66832315-66832334 Msa1263590:intron 50.0%
GTGACCTTTGTGTTAAGGCC+AGG + chr8_2:66832347-66832366 None:intergenic 50.0%
!! GGTTTTGTACGGGAGTTTGG+AGG + chr8_2:66832415-66832434 None:intergenic 50.0%
CTCTTCACTCCAGTTCCTTC+AGG + chr8_2:66832549-66832568 None:intergenic 50.0%
CAGTCCTAGGTAGTGAGACT+AGG - chr8_2:66832591-66832610 Msa1263590:intron 50.0%
CTAGCCTAGTCTCACTACCT+AGG + chr8_2:66832598-66832617 None:intergenic 50.0%
GAGGAGTGAGGGATGTCTGT+TGG + chr8_2:66828858-66828877 None:intergenic 55.0%
TCCCTCACTCCTCTGTTCAG+TGG - chr8_2:66828865-66828884 Msa1263590:three_prime_UTR 55.0%
GAGGCAGAGAGATGTTCCTG+AGG - chr8_2:66829217-66829236 Msa1263590:intron 55.0%
! CAAGGAACTCGGTTCGAGAC+TGG + chr8_2:66829869-66829888 None:intergenic 55.0%
GTCTCGAACCGAGTTCCTTG+AGG - chr8_2:66829869-66829888 Msa1263590:CDS 55.0%
GGAAACATCACAAGGGAGGC+TGG - chr8_2:66831369-66831388 Msa1263590:intron 55.0%
ACAGTTGTCCCACCCTGAAC+TGG + chr8_2:66831396-66831415 None:intergenic 55.0%
!! ATAGGCTCTGGGCTTGAAGG+TGG - chr8_2:66831793-66831812 Msa1263590:intron 55.0%
GCGCATCTCTGCACGACTAA+TGG - chr8_2:66832207-66832226 Msa1263590:intron 55.0%
GGGGAGATCACTATGCAACC+AGG - chr8_2:66832314-66832333 Msa1263590:intron 55.0%
ATGCAACCAGGGCCAATTCC+TGG - chr8_2:66832326-66832345 Msa1263590:intron 55.0%
TTAAGGCCAGGAATTGGCCC+TGG + chr8_2:66832335-66832354 None:intergenic 55.0%
GAGGAGTGAGGGATGTCTGT+TGG + chr8_2:66828858-66828877 None:intergenic 55.0%
TCCCTCACTCCTCTGTTCAG+TGG - chr8_2:66828865-66828884 Msa1263590:three_prime_UTR 55.0%
GAGGCAGAGAGATGTTCCTG+AGG - chr8_2:66829217-66829236 Msa1263590:intron 55.0%
! CAAGGAACTCGGTTCGAGAC+TGG + chr8_2:66829869-66829888 None:intergenic 55.0%
GTCTCGAACCGAGTTCCTTG+AGG - chr8_2:66829869-66829888 Msa1263590:CDS 55.0%
GGAAACATCACAAGGGAGGC+TGG - chr8_2:66831369-66831388 Msa1263590:intron 55.0%
ACAGTTGTCCCACCCTGAAC+TGG + chr8_2:66831396-66831415 None:intergenic 55.0%
!! ATAGGCTCTGGGCTTGAAGG+TGG - chr8_2:66831793-66831812 Msa1263590:intron 55.0%
GCGCATCTCTGCACGACTAA+TGG - chr8_2:66832207-66832226 Msa1263590:intron 55.0%
GGGGAGATCACTATGCAACC+AGG - chr8_2:66832314-66832333 Msa1263590:intron 55.0%
ATGCAACCAGGGCCAATTCC+TGG - chr8_2:66832326-66832345 Msa1263590:intron 55.0%
TTAAGGCCAGGAATTGGCCC+TGG + chr8_2:66832335-66832354 None:intergenic 55.0%
TATGCTTAACCGGTGCCCCG+GGG + chr8_2:66830799-66830818 None:intergenic 60.0%
GTATGCTTAACCGGTGCCCC+GGG + chr8_2:66830800-66830819 None:intergenic 60.0%
GGTATGCTTAACCGGTGCCC+CGG + chr8_2:66830801-66830820 None:intergenic 60.0%
! AAGGGAGGCTGGTCCAGTTC+AGG - chr8_2:66831380-66831399 Msa1263590:intron 60.0%
! AGGGAGGCTGGTCCAGTTCA+GGG - chr8_2:66831381-66831400 Msa1263590:intron 60.0%
! AGGCTGGTCCAGTTCAGGGT+GGG - chr8_2:66831385-66831404 Msa1263590:intron 60.0%
CTCTGGGCTTGAAGGTGGTG+AGG - chr8_2:66831798-66831817 Msa1263590:intron 60.0%
GGGCTTGAAGGTGGTGAGGA+AGG - chr8_2:66831802-66831821 Msa1263590:intron 60.0%
CGTTCACCGACCGACCACTA+AGG + chr8_2:66832436-66832455 None:intergenic 60.0%
TATGCTTAACCGGTGCCCCG+GGG + chr8_2:66830799-66830818 None:intergenic 60.0%
GTATGCTTAACCGGTGCCCC+GGG + chr8_2:66830800-66830819 None:intergenic 60.0%
GGTATGCTTAACCGGTGCCC+CGG + chr8_2:66830801-66830820 None:intergenic 60.0%
! AAGGGAGGCTGGTCCAGTTC+AGG - chr8_2:66831380-66831399 Msa1263590:intron 60.0%
! AGGGAGGCTGGTCCAGTTCA+GGG - chr8_2:66831381-66831400 Msa1263590:intron 60.0%
! AGGCTGGTCCAGTTCAGGGT+GGG - chr8_2:66831385-66831404 Msa1263590:intron 60.0%
CTCTGGGCTTGAAGGTGGTG+AGG - chr8_2:66831798-66831817 Msa1263590:intron 60.0%
GGGCTTGAAGGTGGTGAGGA+AGG - chr8_2:66831802-66831821 Msa1263590:intron 60.0%
CGTTCACCGACCGACCACTA+AGG + chr8_2:66832436-66832455 None:intergenic 60.0%
! GAGGCTGGTCCAGTTCAGGG+TGG - chr8_2:66831384-66831403 Msa1263590:intron 65.0%
GGAGGACGGGGCAACTGTGT+TGG - chr8_2:66832043-66832062 Msa1263590:intron 65.0%
! GAGGCTGGTCCAGTTCAGGG+TGG - chr8_2:66831384-66831403 Msa1263590:intron 65.0%
GGAGGACGGGGCAACTGTGT+TGG - chr8_2:66832043-66832062 Msa1263590:intron 65.0%
GGTCCTCCTAACCGGTGCCC+CGG - chr8_2:66830779-66830798 Msa1263590:intron 70.0%
GTCCTCCTAACCGGTGCCCC+GGG - chr8_2:66830780-66830799 Msa1263590:intron 70.0%
TCCTCCTAACCGGTGCCCCG+GGG - chr8_2:66830781-66830800 Msa1263590:intron 70.0%
GGTCCTCCTAACCGGTGCCC+CGG - chr8_2:66830779-66830798 Msa1263590:intron 70.0%
GTCCTCCTAACCGGTGCCCC+GGG - chr8_2:66830780-66830799 Msa1263590:intron 70.0%
TCCTCCTAACCGGTGCCCCG+GGG - chr8_2:66830781-66830800 Msa1263590:intron 70.0%
TAACCGGTGCCCCGGGGCAC+CGG - chr8_2:66830787-66830806 Msa1263590:intron 75.0%
TAACCGGTGCCCCGGGGCAC+CGG + chr8_2:66830787-66830806 None:intergenic 75.0%
TAACCGGTGCCCCGGGGCAC+CGG - chr8_2:66830787-66830806 Msa1263590:intron 75.0%
TAACCGGTGCCCCGGGGCAC+CGG + chr8_2:66830787-66830806 None:intergenic 75.0%
!!! GCCCCGGGGCACCGGTTAGG+AGG + chr8_2:66830785-66830804 None:intergenic 80.0%
!!! GGTGCCCCGGGGCACCGGTT+AGG + chr8_2:66830792-66830811 None:intergenic 80.0%
!!! GCCCCGGGGCACCGGTTAGG+AGG + chr8_2:66830785-66830804 None:intergenic 80.0%
!!! GGTGCCCCGGGGCACCGGTT+AGG + chr8_2:66830792-66830811 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 66828806 66832891 66828806 ID=Msa1263590;Name=Msa1263590
chr8_2 mRNA 66828806 66832891 66828806 ID=Msa1263590-mRNA-1;Parent=Msa1263590;Name=Msa1263590-mRNA-1;_AED=0.03;_eAED=0.03;_QI=81|1|1|1|0.87|0.88|9|327|281
chr8_2 exon 66828806 66829174 66828806 ID=Msa1263590-mRNA-1:exon:21860;Parent=Msa1263590-mRNA-1
chr8_2 exon 66829300 66829452 66829300 ID=Msa1263590-mRNA-1:exon:21859;Parent=Msa1263590-mRNA-1
chr8_2 exon 66829576 66829683 66829576 ID=Msa1263590-mRNA-1:exon:21858;Parent=Msa1263590-mRNA-1
chr8_2 exon 66829853 66829900 66829853 ID=Msa1263590-mRNA-1:exon:21857;Parent=Msa1263590-mRNA-1
chr8_2 exon 66830152 66830364 66830152 ID=Msa1263590-mRNA-1:exon:21856;Parent=Msa1263590-mRNA-1
chr8_2 exon 66830444 66830508 66830444 ID=Msa1263590-mRNA-1:exon:21855;Parent=Msa1263590-mRNA-1
chr8_2 exon 66832389 66832513 66832389 ID=Msa1263590-mRNA-1:exon:21854;Parent=Msa1263590-mRNA-1
chr8_2 exon 66832599 66832690 66832599 ID=Msa1263590-mRNA-1:exon:21853;Parent=Msa1263590-mRNA-1
chr8_2 exon 66832811 66832891 66832811 ID=Msa1263590-mRNA-1:exon:21852;Parent=Msa1263590-mRNA-1
chr8_2 five_prime_UTR 66832811 66832891 66832811 ID=Msa1263590-mRNA-1:five_prime_utr;Parent=Msa1263590-mRNA-1
chr8_2 CDS 66832599 66832690 66832599 ID=Msa1263590-mRNA-1:cds;Parent=Msa1263590-mRNA-1
chr8_2 CDS 66832389 66832513 66832389 ID=Msa1263590-mRNA-1:cds;Parent=Msa1263590-mRNA-1
chr8_2 CDS 66830444 66830508 66830444 ID=Msa1263590-mRNA-1:cds;Parent=Msa1263590-mRNA-1
chr8_2 CDS 66830152 66830364 66830152 ID=Msa1263590-mRNA-1:cds;Parent=Msa1263590-mRNA-1
chr8_2 CDS 66829853 66829900 66829853 ID=Msa1263590-mRNA-1:cds;Parent=Msa1263590-mRNA-1
chr8_2 CDS 66829576 66829683 66829576 ID=Msa1263590-mRNA-1:cds;Parent=Msa1263590-mRNA-1
chr8_2 CDS 66829300 66829452 66829300 ID=Msa1263590-mRNA-1:cds;Parent=Msa1263590-mRNA-1
chr8_2 CDS 66829133 66829174 66829133 ID=Msa1263590-mRNA-1:cds;Parent=Msa1263590-mRNA-1
chr8_2 three_prime_UTR 66828806 66829132 66828806 ID=Msa1263590-mRNA-1:three_prime_utr;Parent=Msa1263590-mRNA-1
Gene Sequence

>Msa1263590

ATGGCTGAGATTGATTTGGATTGGCCAAAGAAAGACAACCGTCGCTTCCTTCATGTTGTTTATCGTGTTGGTGACCTTGAACGCACCATTAAGTTTTATACTGAGGCTCTTGGGATGAAACTTTTGAGGCAGAGAGATGTTCCTGAGGAGAAATATGCCAATGCTTTTGTTGGATTTGGCGATGAACATTCCCATTTTGCTGTTGAATTAACATATAATTATGGGGTGACTTCGTATGATGTTGGAGATGGCTTTGGACATTTTGCAATTGCAACTCAAGATGTTTACAAATTGGTTGAGCACATTCGTGCTAAAGGTGGAAACATCACAAGGGAGGCTGGTCCAGTTCAGGGTGGGACAACTGTTATTGCCTTTGTGAAGGATCCTGATGGCTACACTTTTGCACTTGTCCAAAGACCTATAGTTCACGACCCATTCTGTCAAATAATGCTTCGCGTTGGTGATTTAGAAGGCGCCATAAAGTTTTATGAAAAGGCTCTGGGCTTGAAGGTGGTGAGGAAGGTTGATAATCCTGAGAACAAGTACACTATTGCTATACTTGGGTATAAAGAGGAGGACGGGGCAACTGTGTTGGAGTTGACATATAATTATGGTGTCACGGAATACTCTAAGGGAACTGCTTATGCACAGATTGCTATTGGTACTGATGATGTCTACAAGAGTGCTGATGTAGTCAACCTAGTCACACAAGAGCTTGGAGGGGAGATCACTATGCAACCAGGGCCAATTCCTGGCCTTAACACAAAGGTCACTTCCTTTTTAGATCCAGAAGGATGGAAAACTGCGTTGGTTGACAATGAAGATTTCCTGAAGGAACTGGAGTGA

Protein sequence

>Msa1263590

MAEIDLDWPKKDNRRFLHVVYRVGDLERTIKFYTEALGMKLLRQRDVPEEKYANAFVGFGDEHSHFAVELTYNYGVTSYDVGDGFGHFAIATQDVYKLVEHIRAKGGNITREAGPVQGGTTVIAFVKDPDGYTFALVQRPIVHDPFCQIMLRVGDLEGAIKFYEKALGLKVVRKVDNPENKYTIAILGYKEEDGATVLELTYNYGVTEYSKGTAYAQIAIGTDDVYKSADVVNLVTQELGGEITMQPGPIPGLNTKVTSFLDPEGWKTALVDNEDFLKELE*