Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310250 | XP_003626834.1 | 98.553 | 622 | 9 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310250 | sp|F4HVY0|CER1_ARATH | 61.859 | 624 | 233 | 2 | 1 | 619 | 1 | 624 | 0.0 | 813 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310250 | G7LDH6 | 98.553 | 622 | 9 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1280 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090860 | Msa1310250 | 0.801852 | 7.405633e-49 | -8.615850e-47 |
| Msa0607280 | Msa1310250 | 0.803116 | 4.064363e-49 | -8.615850e-47 |
| Msa0609790 | Msa1310250 | 0.824565 | 7.535578e-54 | -8.615850e-47 |
| Msa0617120 | Msa1310250 | 0.847178 | 1.363323e-59 | -8.615850e-47 |
| Msa0633860 | Msa1310250 | 0.841834 | 3.735223e-58 | -8.615850e-47 |
| Msa0634420 | Msa1310250 | 0.812884 | 3.387032e-51 | -8.615850e-47 |
| Msa0636720 | Msa1310250 | 0.821470 | 3.969354e-53 | -8.615850e-47 |
| Msa0638710 | Msa1310250 | 0.814013 | 1.912411e-51 | -8.615850e-47 |
| Msa0740350 | Msa1310250 | -0.804553 | 2.043779e-49 | -8.615850e-47 |
| Msa0793100 | Msa1310250 | 0.804129 | 2.504583e-49 | -8.615850e-47 |
| Msa0794130 | Msa1310250 | 0.810423 | 1.161216e-50 | -8.615850e-47 |
| Msa0140290 | Msa1310250 | 0.806061 | 9.874445e-50 | -8.615850e-47 |
| Msa1229640 | Msa1310250 | 0.970612 | 6.974243e-132 | -8.615850e-47 |
| Msa1239900 | Msa1310250 | 0.815110 | 1.093485e-51 | -8.615850e-47 |
| Msa1263590 | Msa1310250 | 0.858512 | 7.830305e-63 | -8.615850e-47 |
| Msa1263670 | Msa1310250 | 0.858013 | 1.102601e-62 | -8.615850e-47 |
| Msa1272340 | Msa1310250 | 0.985469 | 1.155111e-163 | -8.615850e-47 |
| Msa1281270 | Msa1310250 | 0.810267 | 1.254675e-50 | -8.615850e-47 |
| Msa1310250 | Msa1320380 | 0.815246 | 1.020115e-51 | -8.615850e-47 |
| Msa1310250 | Msa1347030 | 0.854815 | 9.575282e-62 | -8.615850e-47 |
| Msa1310250 | Msa1349810 | 0.819365 | 1.206722e-52 | -8.615850e-47 |
| Msa1310250 | Msa1358340 | 0.801560 | 8.499665e-49 | -8.615850e-47 |
| Msa1310250 | Msa1375780 | 0.812485 | 4.139623e-51 | -8.615850e-47 |
| Msa1310250 | Msa1394370 | -0.812149 | 4.901663e-51 | -8.615850e-47 |
| Msa1310250 | Msa1466130 | -0.809326 | 1.999539e-50 | -8.615850e-47 |
| Msa1310250 | Msa1466350 | 0.817376 | 3.404492e-52 | -8.615850e-47 |
| Msa0373220 | Msa1310250 | 0.804094 | 2.547319e-49 | -8.615850e-47 |
| Msa0392050 | Msa1310250 | 0.807527 | 4.838976e-50 | -8.615850e-47 |
| Msa0393880 | Msa1310250 | 0.828058 | 1.110224e-54 | -8.615850e-47 |
| Msa0401340 | Msa1310250 | 0.803583 | 3.252333e-49 | -8.615850e-47 |
| Msa0404070 | Msa1310250 | 0.821758 | 3.405341e-53 | -8.615850e-47 |
| Msa0437550 | Msa1310250 | 0.809600 | 1.746639e-50 | -8.615850e-47 |
| Msa0441670 | Msa1310250 | 0.836798 | 7.573986e-57 | -8.615850e-47 |
| Msa0448120 | Msa1310250 | 0.802044 | 6.761325e-49 | -8.615850e-47 |
| Msa0468020 | Msa1310250 | 0.806285 | 8.861510e-50 | -8.615850e-47 |
| Msa0469950 | Msa1310250 | 0.807607 | 4.653064e-50 | -8.615850e-47 |
| Msa0472270 | Msa1310250 | 0.801427 | 9.050955e-49 | -8.615850e-47 |
| Msa0481490 | Msa1310250 | 0.817114 | 3.899827e-52 | -8.615850e-47 |
| Msa1019230 | Msa1310250 | -0.804679 | 1.924131e-49 | -8.615850e-47 |
| Msa1030870 | Msa1310250 | 0.820566 | 6.410704e-53 | -8.615850e-47 |
| Msa0253160 | Msa1310250 | 0.810301 | 1.233641e-50 | -8.615850e-47 |
| Msa0265580 | Msa1310250 | 0.807081 | 6.016031e-50 | -8.615850e-47 |
| Msa0291940 | Msa1310250 | 0.816289 | 5.971018e-52 | -8.615850e-47 |
| Msa0296000 | Msa1310250 | 0.823049 | 1.707759e-53 | -8.615850e-47 |
| Msa0303440 | Msa1310250 | 0.814061 | 1.866598e-51 | -8.615850e-47 |
| Msa0303500 | Msa1310250 | 0.812271 | 4.610803e-51 | -8.615850e-47 |
| Msa0311910 | Msa1310250 | 0.808490 | 3.018273e-50 | -8.615850e-47 |
| Msa0333900 | Msa1310250 | 0.803189 | 3.925723e-49 | -8.615850e-47 |
| Msa0334020 | Msa1310250 | 0.809224 | 2.102988e-50 | -8.615850e-47 |
| Msa0344680 | Msa1310250 | 0.809166 | 2.163923e-50 | -8.615850e-47 |
| Msa0347280 | Msa1310250 | 0.813758 | 2.176407e-51 | -8.615850e-47 |
| Msa1144730 | Msa1310250 | 0.809640 | 1.712650e-50 | -8.615850e-47 |
| Msa1165810 | Msa1310250 | 0.802204 | 6.267056e-49 | -8.615850e-47 |
| Msa1177960 | Msa1310250 | 0.800953 | 1.131730e-48 | -8.615850e-47 |
| Msa1181510 | Msa1310250 | 0.807006 | 6.238824e-50 | -8.615850e-47 |
| Msa1220680 | Msa1310250 | 0.806177 | 9.336109e-50 | -8.615850e-47 |
| Msa0489330 | Msa1310250 | 0.814170 | 1.765401e-51 | -8.615850e-47 |
| Msa0537870 | Msa1310250 | 0.867793 | 1.052915e-65 | -8.615850e-47 |
| Msa0537880 | Msa1310250 | 0.833673 | 4.659664e-56 | -8.615850e-47 |
| Msa0538260 | Msa1310250 | 0.829110 | 6.184702e-55 | -8.615850e-47 |
| Msa0549760 | Msa1310250 | 0.802449 | 5.579725e-49 | -8.615850e-47 |
| Msa0887280 | Msa1310250 | 0.803881 | 2.820758e-49 | -8.615850e-47 |
| Msa0910010 | Msa1310250 | 0.803313 | 3.699813e-49 | -8.615850e-47 |
| Msa0950900 | Msa1310250 | 0.802849 | 4.615325e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310250 | MtrunA17_Chr8g0337081 | 98.553 | 622 | 9 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1280 |
| Msa1310250 | MtrunA17_Chr8g0337101 | 64.563 | 618 | 218 | 1 | 1 | 617 | 37 | 654 | 0.0 | 845 |
| Msa1310250 | MtrunA17_Chr7g0256371 | 66.234 | 616 | 202 | 2 | 1 | 616 | 10 | 619 | 0.0 | 844 |
| Msa1310250 | MtrunA17_Chr7g0256391 | 65.097 | 616 | 211 | 2 | 1 | 616 | 1 | 612 | 0.0 | 830 |
| Msa1310250 | MtrunA17_Chr7g0256411 | 64.830 | 617 | 212 | 2 | 1 | 617 | 32 | 643 | 0.0 | 825 |
| Msa1310250 | MtrunA17_Chr4g0026761 | 65.434 | 622 | 211 | 2 | 1 | 622 | 1 | 618 | 0.0 | 821 |
| Msa1310250 | MtrunA17_Chr4g0026811 | 64.693 | 456 | 158 | 1 | 20 | 475 | 6 | 458 | 0.0 | 583 |
| Msa1310250 | MtrunA17_Chr4g0073231 | 34.355 | 620 | 395 | 6 | 8 | 615 | 5 | 624 | 3.86e-129 | 393 |
| Msa1310250 | MtrunA17_Chr2g0305431 | 31.541 | 279 | 186 | 2 | 8 | 283 | 5 | 281 | 9.36e-55 | 188 |
| Msa1310250 | MtrunA17_Chr2g0305451 | 34.722 | 216 | 134 | 3 | 407 | 615 | 2 | 217 | 8.98e-38 | 139 |
| Msa1310250 | MtrunA17_Chr4g0026821 | 55.435 | 92 | 40 | 1 | 474 | 565 | 3 | 93 | 7.94e-27 | 105 |
| Msa1310250 | MtrunA17_Chr4g0026831 | 71.111 | 45 | 13 | 0 | 573 | 617 | 1 | 45 | 2.35e-18 | 79.0 |
| Msa1310250 | MtrunA17_Chr2g0305441 | 30.952 | 126 | 87 | 0 | 282 | 407 | 33 | 158 | 3.51e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310250 | AT1G02205.2 | 61.859 | 624 | 233 | 2 | 1 | 619 | 1 | 624 | 0.0 | 813 |
| Msa1310250 | AT1G02205.3 | 61.208 | 629 | 234 | 2 | 1 | 619 | 1 | 629 | 0.0 | 810 |
| Msa1310250 | AT1G02205.4 | 61.157 | 605 | 230 | 2 | 20 | 619 | 21 | 625 | 0.0 | 776 |
| Msa1310250 | AT1G02190.1 | 57.760 | 625 | 251 | 6 | 1 | 615 | 1 | 622 | 0.0 | 728 |
| Msa1310250 | AT1G02190.2 | 57.760 | 625 | 247 | 7 | 1 | 615 | 1 | 618 | 0.0 | 723 |
| Msa1310250 | AT2G37700.3 | 57.512 | 619 | 255 | 3 | 1 | 615 | 1 | 615 | 0.0 | 717 |
| Msa1310250 | AT2G37700.1 | 57.351 | 619 | 247 | 4 | 1 | 615 | 1 | 606 | 0.0 | 711 |
| Msa1310250 | AT2G37700.4 | 53.473 | 619 | 243 | 4 | 1 | 615 | 1 | 578 | 0.0 | 645 |
| Msa1310250 | AT1G02205.1 | 59.382 | 453 | 179 | 2 | 172 | 619 | 8 | 460 | 0.0 | 577 |
| Msa1310250 | AT2G37700.2 | 59.244 | 476 | 189 | 2 | 1 | 475 | 1 | 472 | 0.0 | 561 |
| Msa1310250 | AT1G02205.5 | 56.614 | 378 | 159 | 2 | 247 | 619 | 8 | 385 | 1.99e-162 | 470 |
| Msa1310250 | AT5G57800.1 | 34.032 | 620 | 394 | 6 | 8 | 612 | 5 | 624 | 4.47e-121 | 373 |
Find 135 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGATTTCATGAATAATT+TGG | 0.071224 | 8_4:-6876949 | Msa1310250:CDS |
| ATATATAGCTATTGTGAAAT+TGG | 0.161382 | 8_4:-6871962 | Msa1310250:three_prime_UTR |
| CCAATTTATGATTACATCTA+TGG | 0.221817 | 8_4:-6874608 | Msa1310250:CDS |
| TCCCAATCTTAGTTGATATA+TGG | 0.227104 | 8_4:+6874484 | None:intergenic |
| TCATGTGGCCATTCACCTTT+TGG | 0.234069 | 8_4:-6874412 | Msa1310250:CDS |
| CTCGAAGTCCCAGAAGAATT+TGG | 0.242161 | 8_4:-6873024 | Msa1310250:CDS |
| AGCATCCTCACCATCATATA+TGG | 0.248897 | 8_4:+6878793 | None:intergenic |
| CTTAGTTGATATATGGATTC+AGG | 0.250871 | 8_4:+6874491 | None:intergenic |
| CTGGGAAAACCAAATTCTTC+TGG | 0.252091 | 8_4:+6873015 | None:intergenic |
| TTTGGAGGGAATTGGGAAAA+TGG | 0.256646 | 8_4:+6872763 | None:intergenic |
| TCTTCTCTTATACCCTTTCT+TGG | 0.257970 | 8_4:-6879243 | Msa1310250:five_prime_UTR |
| TGTTTAGCATTGACAAAATA+TGG | 0.263713 | 8_4:-6872137 | Msa1310250:CDS |
| GAGTGGACATTGGATAAATT+AGG | 0.267216 | 8_4:+6872688 | None:intergenic |
| GAAATTTCTTTGGAGGGAAT+TGG | 0.270137 | 8_4:+6872755 | None:intergenic |
| ACAGAGGAAATGTCTTAAAT+TGG | 0.276513 | 8_4:+6871933 | None:intergenic |
| GGATGCTACATGACCAAATT+TGG | 0.279073 | 8_4:-6878777 | Msa1310250:CDS |
| AAGATGGAGAAGACTTTCTT+AGG | 0.303702 | 8_4:+6876903 | None:intergenic |
| ATAATTTATCAACATGCTTC+AGG | 0.307718 | 8_4:-6872005 | Msa1310250:three_prime_UTR |
| GTAATTGCTGTTGTGTATAA+TGG | 0.316269 | 8_4:+6877014 | None:intergenic |
| AGGATAAACTCACAAGTTAT+TGG | 0.325113 | 8_4:+6878004 | None:intergenic |
| AACAATCTTCATCTTAAGTT+GGG | 0.326096 | 8_4:+6873379 | None:intergenic |
| CCATAGATGTAATCATAAAT+TGG | 0.332696 | 8_4:+6874608 | None:intergenic |
| AGTGGACATTGGATAAATTA+GGG | 0.340224 | 8_4:+6872689 | None:intergenic |
| ATTGATTTCATGAATAATTT+GGG | 0.340630 | 8_4:-6876948 | Msa1310250:CDS |
| ATCATGAGAATCTTCAATTA+AGG | 0.341373 | 8_4:-6873052 | Msa1310250:CDS |
| CATGCACTCATGACTCTTCT+TGG | 0.342220 | 8_4:+6872222 | None:intergenic |
| ATGAACGTCCCAACCTTCTA+AGG | 0.344095 | 8_4:+6872176 | None:intergenic |
| GGTACAAACAATGATCCTTT+TGG | 0.353128 | 8_4:+6872784 | None:intergenic |
| GAGAATGATATCTAGAATAA+AGG | 0.354501 | 8_4:+6878053 | None:intergenic |
| ATCCATATATCAACTAAGAT+TGG | 0.361402 | 8_4:-6874486 | Msa1310250:CDS |
| GGAATATTGCACGCCTTAGA+AGG | 0.363668 | 8_4:-6872189 | Msa1310250:CDS |
| ACCTTTGCAGAATTTGATCC+TGG | 0.365054 | 8_4:+6872996 | None:intergenic |
| ATATGCTCAATTTGCAATCA+TGG | 0.374703 | 8_4:-6874331 | Msa1310250:CDS |
| ATGGTGAACTATACATTAAA+AGG | 0.375204 | 8_4:-6873406 | Msa1310250:CDS |
| GAGATAAAGAGATCCAAATT+TGG | 0.381279 | 8_4:+6878764 | None:intergenic |
| CACTACATCATACACAATTT+CGG | 0.388068 | 8_4:-6874652 | Msa1310250:CDS |
| CAGTGGAGTTTCTTTACTAT+TGG | 0.392734 | 8_4:-6878102 | Msa1310250:CDS |
| ATCAGTAAGTATGCCAGGTT+TGG | 0.394606 | 8_4:+6879206 | None:intergenic |
| CTTAAGATGAAGATTGTTGA+TGG | 0.396304 | 8_4:-6873374 | Msa1310250:CDS |
| AGCAGAGTTGAGCAAAGTTA+AGG | 0.398577 | 8_4:-6874141 | Msa1310250:CDS |
| TTCCTCTGTACTAGCATTTG+TGG | 0.400135 | 8_4:-6871919 | Msa1310250:three_prime_UTR |
| CAACAATCTTCATCTTAAGT+TGG | 0.401690 | 8_4:+6873378 | None:intergenic |
| AAATTTCTTTGGAGGGAATT+GGG | 0.405095 | 8_4:+6872756 | None:intergenic |
| GCATCCATAGCATCATTTGC+TGG | 0.414049 | 8_4:-6876984 | Msa1310250:CDS |
| TGGGAAAACCAAATTCTTCT+GGG | 0.421201 | 8_4:+6873016 | None:intergenic |
| ATGAGTGCATGGCGTATTGC+TGG | 0.430094 | 8_4:-6872210 | Msa1310250:CDS |
| ATACTTAAGGATTGGAAAGA+TGG | 0.436601 | 8_4:+6876887 | None:intergenic |
| TTTGGTCTGTTCTTGTCACT+TGG | 0.441280 | 8_4:-6874394 | Msa1310250:CDS |
| AGTTAATGCTTTGTGTGAAA+GGG | 0.442145 | 8_4:-6873255 | Msa1310250:CDS |
| TGTGAATAGTCCTGAGGAAA+AGG | 0.442333 | 8_4:-6878839 | Msa1310250:CDS |
| CACACCACTAGTTCTCCATA+TGG | 0.447709 | 8_4:+6878153 | None:intergenic |
| GTGTATACATGGTATACTTA+AGG | 0.448902 | 8_4:+6876874 | None:intergenic |
| CAAATTCTTCTGGGACTTCG+AGG | 0.450017 | 8_4:+6873025 | None:intergenic |
| TCCATATATCAACTAAGATT+GGG | 0.460592 | 8_4:-6874485 | Msa1310250:CDS |
| GGAGACTTGCTCAATAGATA+TGG | 0.468212 | 8_4:-6873425 | Msa1310250:CDS |
| GACACCTCTCGGGAGATTCA+AGG | 0.470620 | 8_4:-6879175 | Msa1310250:intron |
| ATGACAATTCTTCTACATAG+TGG | 0.472384 | 8_4:-6878127 | Msa1310250:CDS |
| TAGTTAATGCTTTGTGTGAA+AGG | 0.473872 | 8_4:-6873256 | Msa1310250:CDS |
| GATAGACTATAATTCAATCA+AGG | 0.474782 | 8_4:+6872067 | None:intergenic |
| AGATTGAGGTGAGGAGGCTA+AGG | 0.474871 | 8_4:+6874454 | None:intergenic |
| ATTGCACGCCTTAGAAGGTT+GGG | 0.477526 | 8_4:-6872184 | Msa1310250:CDS |
| CTTACTTGAACATGGAACCT+TGG | 0.484638 | 8_4:+6874302 | None:intergenic |
| TGTGTCAAATGCACCACATC+TGG | 0.484985 | 8_4:+6874524 | None:intergenic |
| TAGGCTATGTGTTCTGCAAA+TGG | 0.488094 | 8_4:+6877056 | None:intergenic |
| TATGCTCAATTTGCAATCAT+GGG | 0.489138 | 8_4:-6874330 | Msa1310250:CDS |
| GGGTATAAGAGAAGAGTCAA+AGG | 0.493599 | 8_4:+6879251 | None:intergenic |
| AATTTGCAGATATGGCTAGT+TGG | 0.497195 | 8_4:-6872841 | Msa1310250:intron |
| AACCTGGCATACTTACTGAT+TGG | 0.500706 | 8_4:-6879203 | Msa1310250:CDS |
| AGTTATTGGTTCTGTAACAA+TGG | 0.501203 | 8_4:+6878018 | None:intergenic |
| TGATGGCAGTAGCTTGGTTG+TGG | 0.501613 | 8_4:-6873357 | Msa1310250:CDS |
| GCATCCTCACCATCATATAT+GGG | 0.502244 | 8_4:+6878794 | None:intergenic |
| TATTGCACGCCTTAGAAGGT+TGG | 0.503606 | 8_4:-6872185 | Msa1310250:CDS |
| TGCAATCATGGGTTATTCCA+AGG | 0.508500 | 8_4:-6874319 | Msa1310250:CDS |
| GGCCAATCAGTAAGTATGCC+AGG | 0.509063 | 8_4:+6879201 | None:intergenic |
| AGGGGATGATTAATCTTCAA+TGG | 0.509840 | 8_4:+6872087 | None:intergenic |
| ATTGGCCATGGACACCTCTC+GGG | 0.512414 | 8_4:-6879185 | Msa1310250:CDS |
| TACATGGTATACTTAAGGAT+TGG | 0.514880 | 8_4:+6876879 | None:intergenic |
| CCCAGGATCAAATTCTGCAA+AGG | 0.521549 | 8_4:-6872997 | Msa1310250:intron |
| CCTCATCTTCCCATATATGA+TGG | 0.523645 | 8_4:-6878803 | Msa1310250:CDS |
| GATTGGCCATGGACACCTCT+CGG | 0.524511 | 8_4:-6879186 | Msa1310250:CDS |
| TCTCGCCATCGAACCGCCAA+AGG | 0.525130 | 8_4:-6878745 | Msa1310250:CDS |
| TTTGTGTGAAAGGGGTACTA+AGG | 0.525661 | 8_4:-6873246 | Msa1310250:intron |
| TGTGTGCTCTTTGCTATGAA+TGG | 0.527943 | 8_4:+6878871 | None:intergenic |
| CCTCAAAACTTACTTGAACA+TGG | 0.529432 | 8_4:+6874294 | None:intergenic |
| CCTTTGCAGAATTTGATCCT+GGG | 0.531383 | 8_4:+6872997 | None:intergenic |
| ATATGGATTCAGGAGTAGTA+AGG | 0.537682 | 8_4:+6874501 | None:intergenic |
| AAGTTGATCGAGAAAGCAAT+TGG | 0.540340 | 8_4:-6878684 | Msa1310250:intron |
| AGTGACAAGAACAGACCAAA+AGG | 0.542812 | 8_4:+6874397 | None:intergenic |
| TGGAATGCTGTTAAGAACAA+TGG | 0.543327 | 8_4:+6873334 | None:intergenic |
| ATAACCAGCAAATGATGCTA+TGG | 0.543759 | 8_4:+6876980 | None:intergenic |
| TGAATGGCCACATGAAATAG+AGG | 0.548660 | 8_4:+6874420 | None:intergenic |
| ATAGACTATAATTCAATCAA+GGG | 0.550122 | 8_4:+6872068 | None:intergenic |
| CCTCACCTCAATCTTCTGAA+TGG | 0.552731 | 8_4:-6874445 | Msa1310250:CDS |
| GGCAAGCAAGTCTTCAGCAT+GGG | 0.559393 | 8_4:-6872116 | Msa1310250:CDS |
| AAGTTTAGGTCTTTCAAACC+AGG | 0.561043 | 8_4:-6874114 | Msa1310250:intron |
| GATTGTTGATGGCAGTAGCT+TGG | 0.561867 | 8_4:-6873363 | Msa1310250:CDS |
| GGTTGGGACGTTCATGAATG+TGG | 0.564471 | 8_4:-6872168 | Msa1310250:CDS |
| AGAAGAAGGTGCACCAGATG+TGG | 0.564679 | 8_4:-6874537 | Msa1310250:CDS |
| TACTTACGATGGTGTATACA+TGG | 0.565128 | 8_4:+6876863 | None:intergenic |
| AATTCATTGAAGAAAGAAGA+AGG | 0.567139 | 8_4:-6874551 | Msa1310250:CDS |
| AGAACAGACCAAAAGGTGAA+TGG | 0.569915 | 8_4:+6874404 | None:intergenic |
| TCTTTGTGGTAGACTTGACA+AGG | 0.570755 | 8_4:-6873291 | Msa1310250:CDS |
| TGCTGTTGTGTATAATGGAA+TGG | 0.580525 | 8_4:+6877019 | None:intergenic |
| ACACCACTAGTTCTCCATAT+GGG | 0.582237 | 8_4:+6878154 | None:intergenic |
| CCATCATATATGGGAAGATG+AGG | 0.585846 | 8_4:+6878803 | None:intergenic |
| CAAGAAGAGTCATGAGTGCA+TGG | 0.587562 | 8_4:-6872221 | Msa1310250:CDS |
| ACAATCTTCATCTTAAGTTG+GGG | 0.589510 | 8_4:+6873380 | None:intergenic |
| ATCTACTAACCTCACAAGAG+TGG | 0.589871 | 8_4:+6872671 | None:intergenic |
| AATCTCCCGAGAGGTGTCCA+TGG | 0.590370 | 8_4:+6879180 | None:intergenic |
| GTTAATGCTTTGTGTGAAAG+GGG | 0.590468 | 8_4:-6873254 | Msa1310250:CDS |
| GCATACTTACTGATTGGCCA+TGG | 0.592164 | 8_4:-6879197 | Msa1310250:CDS |
| ATCCAATGTCCACTCTTGTG+AGG | 0.593116 | 8_4:-6872680 | Msa1310250:intron |
| TTCAGAAGATTGAGGTGAGG+AGG | 0.601115 | 8_4:+6874448 | None:intergenic |
| AGGTACCATTCAGAAGATTG+AGG | 0.601316 | 8_4:+6874440 | None:intergenic |
| TGCTTCAGGTATTATCAGCA+AGG | 0.607213 | 8_4:-6871991 | Msa1310250:three_prime_UTR |
| CGCCACAAATGCTAGTACAG+AGG | 0.611522 | 8_4:+6871917 | None:intergenic |
| TCTTCTACATAGTGGACCAG+TGG | 0.617911 | 8_4:-6878119 | Msa1310250:CDS |
| GTGGACATTGGATAAATTAG+GGG | 0.619031 | 8_4:+6872690 | None:intergenic |
| TCTTCCCATATATGATGGTG+AGG | 0.622744 | 8_4:-6878798 | Msa1310250:CDS |
| ATATTATAAATAGATAGACT+TGG | 0.628761 | 8_4:-6879295 | Msa1310250:five_prime_UTR |
| AACCTCACAAGAGTGGACAT+TGG | 0.630620 | 8_4:+6872678 | None:intergenic |
| CAATAGTAAAGAAACTCCAC+TGG | 0.634669 | 8_4:+6878103 | None:intergenic |
| TTACCCATATGGAGAACTAG+TGG | 0.639339 | 8_4:-6878157 | Msa1310250:CDS |
| TGGCAAGCAAGTCTTCAGCA+TGG | 0.640804 | 8_4:-6872117 | Msa1310250:CDS |
| AATGGTACCTCTATTTCATG+TGG | 0.646040 | 8_4:-6874427 | Msa1310250:CDS |
| TTTCATTGTGAATAGTCCTG+AGG | 0.651795 | 8_4:-6878845 | Msa1310250:CDS |
| TAGACTATAATTCAATCAAG+GGG | 0.662906 | 8_4:+6872069 | None:intergenic |
| TGGACATTGGATAAATTAGG+GGG | 0.663725 | 8_4:+6872691 | None:intergenic |
| GGAAGATGAGGAAGTTACTG+AGG | 0.681674 | 8_4:+6878815 | None:intergenic |
| CATATGGAGAACTAGTGGTG+TGG | 0.687095 | 8_4:-6878152 | Msa1310250:CDS |
| AGTTGGAGATCAATGTGAGG+AGG | 0.689214 | 8_4:-6872824 | Msa1310250:CDS |
| ATTGTGTATGATGTAGTGAG+TGG | 0.695326 | 8_4:+6874657 | None:intergenic |
| CCATTCAGAAGATTGAGGTG+AGG | 0.698317 | 8_4:+6874445 | None:intergenic |
| GCTAGTTGGAGATCAATGTG+AGG | 0.727664 | 8_4:-6872827 | Msa1310250:CDS |
| GAAACCTTGAATCTCCCGAG+AGG | 0.749240 | 8_4:+6879171 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATAATTTTTATTTTTA+AGG | - | chr8_4:6876881-6876900 | Msa1310250:CDS | 0.0% |
| !! | GATCAAAAAATATTAAATTA+AGG | - | chr8_4:6872854-6872873 | Msa1310250:intron | 10.0% |
| !! | TAAAATAAAAAACAAAACAT+AGG | + | chr8_4:6873163-6873182 | None:intergenic | 10.0% |
| !!! | GATAGTTTTTTTTTTTTTAA+GGG | + | chr8_4:6873757-6873776 | None:intergenic | 10.0% |
| !!! | TGATAGTTTTTTTTTTTTTA+AGG | + | chr8_4:6873758-6873777 | None:intergenic | 10.0% |
| !! | TTTAACTAATATAAGTTAAA+AGG | - | chr8_4:6874541-6874560 | Msa1310250:CDS | 10.0% |
| !! | ATATTATAAATAGATAGACT+TGG | - | chr8_4:6871849-6871868 | Msa1310250:three_prime_UTR | 15.0% |
| !! | TAATTGTTTGTTTGAAAAAA+TGG | - | chr8_4:6872221-6872240 | Msa1310250:CDS | 15.0% |
| !!! | AAGTTGGAAATTTTATAATA+GGG | + | chr8_4:6872785-6872804 | None:intergenic | 15.0% |
| !!! | TAAGTTGGAAATTTTATAAT+AGG | + | chr8_4:6872786-6872805 | None:intergenic | 15.0% |
| !! | ATTTATATATGTCTTTAAGT+TGG | + | chr8_4:6872801-6872820 | None:intergenic | 15.0% |
| !! | AAGACATATATAAATATACA+TGG | - | chr8_4:6872806-6872825 | Msa1310250:CDS | 15.0% |
| !!! | AATGCATTGATATTTTATAT+TGG | - | chr8_4:6872936-6872955 | Msa1310250:intron | 15.0% |
| !!! | ATCTTTATTTCCATATTATT+GGG | + | chr8_4:6873203-6873222 | None:intergenic | 15.0% |
| !!! | TTAATTTTGTTCATTCAATT+TGG | + | chr8_4:6873502-6873521 | None:intergenic | 15.0% |
| !! | ACATATTAATTAACAATCTA+GGG | + | chr8_4:6873986-6874005 | None:intergenic | 15.0% |
| !! | CTAATATCTTCAATTTAATT+TGG | - | chr8_4:6874047-6874066 | Msa1310250:intron | 15.0% |
| !!! | ATTGATTTCATGAATAATTT+GGG | - | chr8_4:6874196-6874215 | Msa1310250:CDS | 15.0% |
| !! | TTGTATATTCAATATCTTAA+TGG | - | chr8_4:6874340-6874359 | Msa1310250:CDS | 15.0% |
| !!! | TTAATTTCATTCCTTTTAAA+TGG | - | chr8_4:6874364-6874383 | Msa1310250:CDS | 15.0% |
| !!! | TAATTTCATTCCTTTTAAAT+GGG | - | chr8_4:6874365-6874384 | Msa1310250:CDS | 15.0% |
| !!! | TTAATAGAGTTTTTTTTATG+TGG | - | chr8_4:6874634-6874653 | Msa1310250:CDS | 15.0% |
| !!! | TAGTAATTTTGAATTAATAG+CGG | - | chr8_4:6874663-6874682 | Msa1310250:CDS | 15.0% |
| !! | TTTAGTCTAAGTATTTAATA+TGG | - | chr8_4:6875058-6875077 | Msa1310250:intron | 15.0% |
| !! | TTTAATTAACCTCTAATAAA+AGG | - | chr8_4:6875551-6875570 | Msa1310250:intron | 15.0% |
| !! | TTAATTAACCTCTAATAAAA+GGG | - | chr8_4:6875552-6875571 | Msa1310250:intron | 15.0% |
| !!! | TTGATAGTAACTATTTATAT+TGG | - | chr8_4:6875618-6875637 | Msa1310250:intron | 15.0% |
| !! | TGATAGTAACTATTTATATT+GGG | - | chr8_4:6875619-6875638 | Msa1310250:intron | 15.0% |
| !!! | ATATAATTTCGTTTTTGAAA+TGG | - | chr8_4:6876175-6876194 | Msa1310250:intron | 15.0% |
| !! | AATCATAAGAAGAAAAAAAA+GGG | + | chr8_4:6876408-6876427 | None:intergenic | 15.0% |
| !! | AAATCATAAGAAGAAAAAAA+AGG | + | chr8_4:6876409-6876428 | None:intergenic | 15.0% |
| !!! | TTTTGTAGTATCTTTTTAAA+TGG | - | chr8_4:6876936-6876955 | Msa1310250:CDS | 15.0% |
| !! | ATCAAACATTATAAAATTAG+AGG | + | chr8_4:6877061-6877080 | None:intergenic | 15.0% |
| !!! | TTATAATGTTTGATTTTACA+CGG | - | chr8_4:6877067-6877086 | Msa1310250:CDS | 15.0% |
| !!! | GTCAATACATATAATTTTTT+TGG | - | chr8_4:6877324-6877343 | Msa1310250:intron | 15.0% |
| !!! | TTTTTGGCTAAATTATATTT+TGG | - | chr8_4:6877340-6877359 | Msa1310250:intron | 15.0% |
| !!! | TTTGGTTCTTTAAATTATTT+TGG | - | chr8_4:6877449-6877468 | Msa1310250:intron | 15.0% |
| !!! | AAATTATTTTGGTTTCATTT+TGG | - | chr8_4:6877460-6877479 | Msa1310250:intron | 15.0% |
| !! | TAAATGAAAAAAAAGCTTAA+AGG | - | chr8_4:6877630-6877649 | Msa1310250:intron | 15.0% |
| !! | CTACTAAATTATTTAAGAAT+TGG | - | chr8_4:6878549-6878568 | Msa1310250:intron | 15.0% |
| !! | TGTGATGATAGATTAATAAT+TGG | + | chr8_4:6872036-6872055 | None:intergenic | 20.0% |
| !! | CATAGAAATTAAATAATGCA+TGG | + | chr8_4:6872091-6872110 | None:intergenic | 20.0% |
| !! | TAGTTTCTATAACAATTCAT+AGG | + | chr8_4:6872175-6872194 | None:intergenic | 20.0% |
| !!! | ATATTTTTTTTTGTGTGTGT+AGG | - | chr8_4:6872895-6872914 | Msa1310250:intron | 20.0% |
| !!! | TATTTTTTTTTGTGTGTGTA+GGG | - | chr8_4:6872896-6872915 | Msa1310250:intron | 20.0% |
| !!! | TGATATTTTATATTGGTCAA+TGG | - | chr8_4:6872943-6872962 | Msa1310250:intron | 20.0% |
| !!! | CATCTTTATTTCCATATTAT+TGG | + | chr8_4:6873204-6873223 | None:intergenic | 20.0% |
| !! | TATAGTTTAAAAAATCAGCA+TGG | - | chr8_4:6873286-6873305 | Msa1310250:CDS | 20.0% |
| !!! | ATTTTAAATTTTGTTGGTAG+TGG | + | chr8_4:6873312-6873331 | None:intergenic | 20.0% |
| !!! | GTGTGAATTTTAAATTTTGT+TGG | + | chr8_4:6873318-6873337 | None:intergenic | 20.0% |
| !! | AAAAGAAAATTTAATTGTGG+TGG | + | chr8_4:6873348-6873367 | None:intergenic | 20.0% |
| !! | GAGAAAAGAAAATTTAATTG+TGG | + | chr8_4:6873351-6873370 | None:intergenic | 20.0% |
| !! | TGAATGAACAAAATTAAAGA+TGG | - | chr8_4:6873505-6873524 | Msa1310250:intron | 20.0% |
| !! | GAATGAACAAAATTAAAGAT+GGG | - | chr8_4:6873506-6873525 | Msa1310250:intron | 20.0% |
| !! | CACATATTAATTAACAATCT+AGG | + | chr8_4:6873987-6874006 | None:intergenic | 20.0% |
| !!! | CATTGATTTCATGAATAATT+TGG | - | chr8_4:6874195-6874214 | Msa1310250:CDS | 20.0% |
| !!! | TACTATGACTTTATTTCATA+GGG | + | chr8_4:6875378-6875397 | None:intergenic | 20.0% |
| !! | AATTATGAAGGTAAAAAACT+AGG | - | chr8_4:6875427-6875446 | Msa1310250:intron | 20.0% |
| !!! | TTTAAAGTTTGCATCAATAA+TGG | - | chr8_4:6875463-6875482 | Msa1310250:intron | 20.0% |
| !! | ATTAAAGATGCTTACATATA+AGG | + | chr8_4:6875537-6875556 | None:intergenic | 20.0% |
| !! | TTTACGATACTTATAAGATA+AGG | + | chr8_4:6875665-6875684 | None:intergenic | 20.0% |
| !! | ACTTATAAAACCATTTGTAA+GGG | + | chr8_4:6875825-6875844 | None:intergenic | 20.0% |
| !! | TACTTATAAAACCATTTGTA+AGG | + | chr8_4:6875826-6875845 | None:intergenic | 20.0% |
| !! | AGTGGTTATATATTATAACT+CGG | + | chr8_4:6876104-6876123 | None:intergenic | 20.0% |
| !!! | TATATATATTTGTTACAGAG+TGG | + | chr8_4:6876122-6876141 | None:intergenic | 20.0% |
| !! | ACCAAATTTATTAGATAAAG+AGG | - | chr8_4:6876291-6876310 | Msa1310250:intron | 20.0% |
| !! | TCCTCTTTATCTAATAAATT+TGG | + | chr8_4:6876295-6876314 | None:intergenic | 20.0% |
| !! | TACACATATTATAGTAAGAA+AGG | + | chr8_4:6876379-6876398 | None:intergenic | 20.0% |
| !!! | AAAGTTAAGGTTTTAAGTTT+AGG | - | chr8_4:6877016-6877035 | Msa1310250:CDS | 20.0% |
| !!! | TTGGTCACTTAATTTAATTT+TGG | - | chr8_4:6877359-6877378 | Msa1310250:intron | 20.0% |
| !!! | ATCTTTTAAGTCACAAAATT+TGG | - | chr8_4:6877513-6877532 | Msa1310250:intron | 20.0% |
| !!! | AAAACTTGATTTTCTTCTTT+TGG | + | chr8_4:6877833-6877852 | None:intergenic | 20.0% |
| !!! | AAAAATAACACTAATGCTTT+TGG | - | chr8_4:6878240-6878259 | Msa1310250:intron | 20.0% |
| !! | TTTATTTGAATTTGCAGATA+TGG | - | chr8_4:6878295-6878314 | Msa1310250:intron | 20.0% |
| !! | ATAACATCACAATATATACA+AGG | + | chr8_4:6878602-6878621 | None:intergenic | 20.0% |
| !! | ATAGACTATAATTCAATCAA+GGG | + | chr8_4:6879079-6879098 | None:intergenic | 20.0% |
| !! | ATATATAGCTATTGTGAAAT+TGG | - | chr8_4:6879182-6879201 | Msa1310250:CDS | 20.0% |
| ! | ATATAAACCAAAGCTATGTT+TGG | + | chr8_4:6872726-6872745 | None:intergenic | 25.0% |
| !! | GAGAATGATATCTAGAATAA+AGG | + | chr8_4:6873094-6873113 | None:intergenic | 25.0% |
| ! | TTTATTTCCATATTATTGGG+AGG | + | chr8_4:6873200-6873219 | None:intergenic | 25.0% |
| ! | ATATGGAAATAAAGATGAGT+AGG | - | chr8_4:6873207-6873226 | Msa1310250:intron | 25.0% |
| !! | AATAAAAACCACTTGATAGT+TGG | + | chr8_4:6873595-6873614 | None:intergenic | 25.0% |
| ! | AAATAGACGTAGCAATATAA+TGG | - | chr8_4:6873645-6873664 | Msa1310250:intron | 25.0% |
| ! | AATAGACGTAGCAATATAAT+GGG | - | chr8_4:6873646-6873665 | Msa1310250:intron | 25.0% |
| ! | GGAGGAGAATAAAAATTATT+GGG | - | chr8_4:6873668-6873687 | Msa1310250:intron | 25.0% |
| ! | ATGGACATATTAACAATCTA+GGG | + | chr8_4:6873878-6873897 | None:intergenic | 25.0% |
| ! | TTCATGAAATTAAAGTCACA+TGG | + | chr8_4:6873897-6873916 | None:intergenic | 25.0% |
| ! | AATGTGCTAAGATTTGATAA+AGG | + | chr8_4:6874321-6874340 | None:intergenic | 25.0% |
| ! | AAAGGTTGTTTATATAGCAA+TGG | - | chr8_4:6874559-6874578 | Msa1310250:CDS | 25.0% |
| !! | TATACAATCATTTGTTACCA+CGG | - | chr8_4:6874776-6874795 | Msa1310250:intron | 25.0% |
| !! | ATTTTTGTCATGAGTTAAGT+TGG | - | chr8_4:6875001-6875020 | Msa1310250:intron | 25.0% |
| !! | TTTTTGTCATGAGTTAAGTT+GGG | - | chr8_4:6875002-6875021 | Msa1310250:intron | 25.0% |
| ! | ACTTAATGTGAGAAATTCTT+AGG | + | chr8_4:6875313-6875332 | None:intergenic | 25.0% |
| ! | AGAATTTCTCACATTAAGTT+AGG | - | chr8_4:6875314-6875333 | Msa1310250:intron | 25.0% |
| !! | GTACTATGACTTTATTTCAT+AGG | + | chr8_4:6875379-6875398 | None:intergenic | 25.0% |
| ! | ATCCAACAGATTAATTATGA+AGG | - | chr8_4:6875415-6875434 | Msa1310250:intron | 25.0% |
| ! | TACCTTCATAATTAATCTGT+TGG | + | chr8_4:6875420-6875439 | None:intergenic | 25.0% |
| !!! | TAAAAGGGTGTTTAGATATA+TGG | - | chr8_4:6875567-6875586 | Msa1310250:intron | 25.0% |
| !! | TAAGTATCGTAAATATGAGT+TGG | - | chr8_4:6875672-6875691 | Msa1310250:intron | 25.0% |
| ! | CTTATAAAACCATTTGTAAG+GGG | + | chr8_4:6875824-6875843 | None:intergenic | 25.0% |
| ! | TAAAGAGGATAATTAGACAA+TGG | - | chr8_4:6876306-6876325 | Msa1310250:intron | 25.0% |
| !!! | TGGAGTACTTTTTTTATGTT+AGG | - | chr8_4:6876326-6876345 | Msa1310250:intron | 25.0% |
| ! | CTAAATATATGATATGTGAC+AGG | - | chr8_4:6876462-6876481 | Msa1310250:intron | 25.0% |
| ! | CCATAGATGTAATCATAAAT+TGG | + | chr8_4:6876539-6876558 | None:intergenic | 25.0% |
| ! | CCAATTTATGATTACATCTA+TGG | - | chr8_4:6876536-6876555 | Msa1310250:intron | 25.0% |
| ! | AATTCATTGAAGAAAGAAGA+AGG | - | chr8_4:6876593-6876612 | Msa1310250:intron | 25.0% |
| ! | ATCCATATATCAACTAAGAT+TGG | - | chr8_4:6876658-6876677 | Msa1310250:intron | 25.0% |
| ! | TCCATATATCAACTAAGATT+GGG | - | chr8_4:6876659-6876678 | Msa1310250:intron | 25.0% |
| !!! | GTAGGTCTTTTTTTTTTTTG+TGG | + | chr8_4:6877248-6877267 | None:intergenic | 25.0% |
| ! | GACACAAAAAATAAACTCAA+GGG | + | chr8_4:6877397-6877416 | None:intergenic | 25.0% |
| ! | TGACACAAAAAATAAACTCA+AGG | + | chr8_4:6877398-6877417 | None:intergenic | 25.0% |
| ! | ATATATGTTCAATGAATGCA+GGG | - | chr8_4:6877698-6877717 | Msa1310250:intron | 25.0% |
| ! | ATGGTGAACTATACATTAAA+AGG | - | chr8_4:6877738-6877757 | Msa1310250:intron | 25.0% |
| ! | AACAATCTTCATCTTAAGTT+GGG | + | chr8_4:6877768-6877787 | None:intergenic | 25.0% |
| !! | GAAAATCAAGTTTTTCTTTG+TGG | - | chr8_4:6877839-6877858 | Msa1310250:intron | 25.0% |
| !!! | TTTTTTTCCTTCTTTCTTTC+AGG | - | chr8_4:6878048-6878067 | Msa1310250:CDS | 25.0% |
| ! | ATCATGAGAATCTTCAATTA+AGG | - | chr8_4:6878092-6878111 | Msa1310250:CDS | 25.0% |
| !! | CAATCTTTTCGAAATTTCTT+TGG | + | chr8_4:6878402-6878421 | None:intergenic | 25.0% |
| ! | TTACTCTCTTAGAAATCAAA+AGG | - | chr8_4:6878515-6878534 | Msa1310250:intron | 25.0% |
| !! | TTTTGTATATGCAACAGAAT+TGG | - | chr8_4:6878896-6878915 | Msa1310250:intron | 25.0% |
| !!! | TGTTTAGCATTGACAAAATA+TGG | - | chr8_4:6879007-6879026 | Msa1310250:intron | 25.0% |
| ! | TAGACTATAATTCAATCAAG+GGG | + | chr8_4:6879078-6879097 | None:intergenic | 25.0% |
| ! | GATAGACTATAATTCAATCA+AGG | + | chr8_4:6879080-6879099 | None:intergenic | 25.0% |
| ! | ATAATTTATCAACATGCTTC+AGG | - | chr8_4:6879139-6879158 | Msa1310250:intron | 25.0% |
| !! | AGTGATCGTTTTCAAATTAT+TGG | - | chr8_4:6879296-6879315 | Msa1310250:five_prime_UTR | 25.0% |
| CATAGGAATTAAATCATGCA+TGG | + | chr8_4:6872158-6872177 | None:intergenic | 30.0% | |
| GAGATAAAGAGATCCAAATT+TGG | + | chr8_4:6872383-6872402 | None:intergenic | 30.0% | |
| !! | TAATCGTAAATAAGGTGTTG+TGG | + | chr8_4:6872563-6872582 | None:intergenic | 30.0% |
| GACACTAGTAATCGTAAATA+AGG | + | chr8_4:6872571-6872590 | None:intergenic | 30.0% | |
| GTGACTTTAAATGTGAGTTT+GGG | + | chr8_4:6872617-6872636 | None:intergenic | 30.0% | |
| ! | GTTTGGATAATGTTTTTCCA+GGG | + | chr8_4:6872709-6872728 | None:intergenic | 30.0% |
| ! | TGTTTGGATAATGTTTTTCC+AGG | + | chr8_4:6872710-6872729 | None:intergenic | 30.0% |
| ACATTATCCAAACATAGCTT+TGG | - | chr8_4:6872716-6872735 | Msa1310250:CDS | 30.0% | |
| ! | ATTTTATATTGGTCAATGGC+TGG | - | chr8_4:6872947-6872966 | Msa1310250:intron | 30.0% |
| AGTCTCAAAAATTACCCATA+TGG | - | chr8_4:6872976-6872995 | Msa1310250:intron | 30.0% | |
| ATGACAATTCTTCTACATAG+TGG | - | chr8_4:6873017-6873036 | Msa1310250:CDS | 30.0% | |
| !! | AGTTATTGGTTCTGTAACAA+TGG | + | chr8_4:6873129-6873148 | None:intergenic | 30.0% |
| AGGATAAACTCACAAGTTAT+TGG | + | chr8_4:6873143-6873162 | None:intergenic | 30.0% | |
| ATGTAGTGTAAAGTTGTTCA+CGG | - | chr8_4:6873262-6873281 | Msa1310250:CDS | 30.0% | |
| !! | TCTAGTTCATGTACATGTTT+TGG | + | chr8_4:6873437-6873456 | None:intergenic | 30.0% |
| ATAGACGTAGCAATATAATG+GGG | - | chr8_4:6873647-6873666 | Msa1310250:intron | 30.0% | |
| GGGAGGAGAATAAAAATTAT+TGG | - | chr8_4:6873667-6873686 | Msa1310250:intron | 30.0% | |
| GAATAAAAATTATTGGGCTG+AGG | - | chr8_4:6873674-6873693 | Msa1310250:intron | 30.0% | |
| CATGGACATATTAACAATCT+AGG | + | chr8_4:6873879-6873898 | None:intergenic | 30.0% | |
| AATGGCAAATAGCAAAAAGT+AGG | + | chr8_4:6874110-6874129 | None:intergenic | 30.0% | |
| ! | GTAATTGCTGTTGTGTATAA+TGG | + | chr8_4:6874133-6874152 | None:intergenic | 30.0% |
| ATACTTAAGGATTGGAAAGA+TGG | + | chr8_4:6874260-6874279 | None:intergenic | 30.0% | |
| TACATGGTATACTTAAGGAT+TGG | + | chr8_4:6874268-6874287 | None:intergenic | 30.0% | |
| GTGTATACATGGTATACTTA+AGG | + | chr8_4:6874273-6874292 | None:intergenic | 30.0% | |
| !! | TTGATAAAGGTGTTAAGAGT+TGG | + | chr8_4:6874308-6874327 | None:intergenic | 30.0% |
| TTCAAATGCTCCCATTTAAA+AGG | + | chr8_4:6874378-6874397 | None:intergenic | 30.0% | |
| GCTCATGTATAAAATGTTTG+AGG | + | chr8_4:6874887-6874906 | None:intergenic | 30.0% | |
| TGTGATCAAACCAAATTTCT+TGG | + | chr8_4:6875176-6875195 | None:intergenic | 30.0% | |
| !!! | TCTTCTCTCTCTTCTTTTTT+TGG | - | chr8_4:6875253-6875272 | Msa1310250:intron | 30.0% |
| TGTGACCAAAGAAAATTTCT+AGG | - | chr8_4:6875277-6875296 | Msa1310250:intron | 30.0% | |
| TAATGTGAGAAATTCTTAGG+TGG | + | chr8_4:6875310-6875329 | None:intergenic | 30.0% | |
| TAACTCCTTATATCTAGTTG+GGG | + | chr8_4:6875506-6875525 | None:intergenic | 30.0% | |
| GTAACTCCTTATATCTAGTT+GGG | + | chr8_4:6875507-6875526 | None:intergenic | 30.0% | |
| AAGATGCTTACATATAAGGA+CGG | + | chr8_4:6875533-6875552 | None:intergenic | 30.0% | |
| ! | TCTAAACACCCTTTTATTAG+AGG | + | chr8_4:6875563-6875582 | None:intergenic | 30.0% |
| CACTACATCATACACAATTT+CGG | - | chr8_4:6876492-6876511 | Msa1310250:intron | 30.0% | |
| ! | CTTAGTTGATATATGGATTC+AGG | + | chr8_4:6876656-6876675 | None:intergenic | 30.0% |
| ! | TCCCAATCTTAGTTGATATA+TGG | + | chr8_4:6876663-6876682 | None:intergenic | 30.0% |
| ATATGCTCAATTTGCAATCA+TGG | - | chr8_4:6876813-6876832 | Msa1310250:intron | 30.0% | |
| TATGCTCAATTTGCAATCAT+GGG | - | chr8_4:6876814-6876833 | Msa1310250:intron | 30.0% | |
| ACGATGCATAAAATATGCAA+AGG | - | chr8_4:6877204-6877223 | Msa1310250:intron | 30.0% | |
| !!! | GGTCTTTTTTTTTTTTGTGG+TGG | + | chr8_4:6877245-6877264 | None:intergenic | 30.0% |
| TGTCTAGCATTATGAGTTAA+GGG | + | chr8_4:6877428-6877447 | None:intergenic | 30.0% | |
| TTGTCTAGCATTATGAGTTA+AGG | + | chr8_4:6877429-6877448 | None:intergenic | 30.0% | |
| ACTCATAATGCTAGACAATT+TGG | - | chr8_4:6877431-6877450 | Msa1310250:intron | 30.0% | |
| ACACTTAGTCCTTCAAATAA+GGG | - | chr8_4:6877536-6877555 | Msa1310250:intron | 30.0% | |
| ! | TATTTCGATCCCTTATTTGA+AGG | + | chr8_4:6877548-6877567 | None:intergenic | 30.0% |
| CATATATGTTCAATGAATGC+AGG | - | chr8_4:6877697-6877716 | Msa1310250:intron | 30.0% | |
| ! | ACAATCTTCATCTTAAGTTG+GGG | + | chr8_4:6877767-6877786 | None:intergenic | 30.0% |
| CAACAATCTTCATCTTAAGT+TGG | + | chr8_4:6877769-6877788 | None:intergenic | 30.0% | |
| CTTAAGATGAAGATTGTTGA+TGG | - | chr8_4:6877770-6877789 | Msa1310250:intron | 30.0% | |
| TAGTTAATGCTTTGTGTGAA+AGG | - | chr8_4:6877888-6877907 | Msa1310250:intron | 30.0% | |
| AGTTAATGCTTTGTGTGAAA+GGG | - | chr8_4:6877889-6877908 | Msa1310250:intron | 30.0% | |
| !! | GAACAAAAAAAAGCACCAAA+AGG | - | chr8_4:6878345-6878364 | Msa1310250:intron | 30.0% |
| ! | AAATTTCTTTGGAGGGAATT+GGG | + | chr8_4:6878391-6878410 | None:intergenic | 30.0% |
| ! | CTTTTCGAAATTTCTTTGGA+GGG | + | chr8_4:6878398-6878417 | None:intergenic | 30.0% |
| ! | TCTTTTCGAAATTTCTTTGG+AGG | + | chr8_4:6878399-6878418 | None:intergenic | 30.0% |
| AGTGGACATTGGATAAATTA+GGG | + | chr8_4:6878458-6878477 | None:intergenic | 30.0% | |
| ! | TGATTTCTAAGAGAGTAAAC+TGG | + | chr8_4:6878513-6878532 | None:intergenic | 30.0% |
| ATCATTGTCTTGATCATAGT+CGG | - | chr8_4:6878624-6878643 | Msa1310250:intron | 30.0% | |
| !! | TGTTTTTGTTACTGTAGTCA+TGG | + | chr8_4:6878709-6878728 | None:intergenic | 30.0% |
| ACAGAGGAAATGTCTTAAAT+TGG | + | chr8_4:6879214-6879233 | None:intergenic | 30.0% | |
| TCTTCTCTTATACCCTTTCT+TGG | - | chr8_4:6871901-6871920 | Msa1310250:three_prime_UTR | 35.0% | |
| ACCCTTTCTTGGCATAAAAA+TGG | - | chr8_4:6871912-6871931 | Msa1310250:three_prime_UTR | 35.0% | |
| !!! | GCCATTTTTATGCCAAGAAA+GGG | + | chr8_4:6871916-6871935 | None:intergenic | 35.0% |
| AAATGGATGATACAATGCAG+TGG | - | chr8_4:6872238-6872257 | Msa1310250:intron | 35.0% | |
| AATGGATGATACAATGCAGT+GGG | - | chr8_4:6872239-6872258 | Msa1310250:intron | 35.0% | |
| TTTCATTGTGAATAGTCCTG+AGG | - | chr8_4:6872299-6872318 | Msa1310250:intron | 35.0% | |
| !!! | GATTCTGTTTTTTCCTTTGG+CGG | + | chr8_4:6872415-6872434 | None:intergenic | 35.0% |
| !!! | GACGATTCTGTTTTTTCCTT+TGG | + | chr8_4:6872418-6872437 | None:intergenic | 35.0% |
| AAAAAACAGAATCGTCGACA+AGG | - | chr8_4:6872422-6872441 | Msa1310250:intron | 35.0% | |
| ! | AAGTTGATCGAGAAAGCAAT+TGG | - | chr8_4:6872460-6872479 | Msa1310250:intron | 35.0% |
| TACGATTACTAGTGTCTGTT+TGG | - | chr8_4:6872575-6872594 | Msa1310250:intron | 35.0% | |
| CGTGACTTTAAATGTGAGTT+TGG | + | chr8_4:6872618-6872637 | None:intergenic | 35.0% | |
| ! | CTTCATGCTTTTAGTAGTGA+AGG | - | chr8_4:6872663-6872682 | Msa1310250:intron | 35.0% |
| !!! | ATGGGTAATTTTTGAGACTC+TGG | + | chr8_4:6872975-6872994 | None:intergenic | 35.0% |
| CAATAGTAAAGAAACTCCAC+TGG | + | chr8_4:6873044-6873063 | None:intergenic | 35.0% | |
| CAGTGGAGTTTCTTTACTAT+TGG | - | chr8_4:6873042-6873061 | Msa1310250:CDS | 35.0% | |
| TTTACCACCTCCCAATAATA+TGG | - | chr8_4:6873190-6873209 | Msa1310250:intron | 35.0% | |
| ATTTCCATATTATTGGGAGG+TGG | + | chr8_4:6873197-6873216 | None:intergenic | 35.0% | |
| GAGTAGGTGAGAAATTAATG+TGG | - | chr8_4:6873223-6873242 | Msa1310250:intron | 35.0% | |
| ACCTATTACCAACTATCAAG+TGG | - | chr8_4:6873584-6873603 | Msa1310250:intron | 35.0% | |
| !! | ACCACTTGATAGTTGGTAAT+AGG | + | chr8_4:6873588-6873607 | None:intergenic | 35.0% |
| ! | TGCTGTTGTGTATAATGGAA+TGG | + | chr8_4:6874128-6874147 | None:intergenic | 35.0% |
| ATAACCAGCAAATGATGCTA+TGG | + | chr8_4:6874167-6874186 | None:intergenic | 35.0% | |
| AAGATGGAGAAGACTTTCTT+AGG | + | chr8_4:6874244-6874263 | None:intergenic | 35.0% | |
| TACTTACGATGGTGTATACA+TGG | + | chr8_4:6874284-6874303 | None:intergenic | 35.0% | |
| TAAGAGTTGGATACTTACGA+TGG | + | chr8_4:6874295-6874314 | None:intergenic | 35.0% | |
| ! | TAATTATAAAGCATTCGCCG+TGG | + | chr8_4:6874796-6874815 | None:intergenic | 35.0% |
| AAGAGAGAAGAGAGAGAAAA+TGG | + | chr8_4:6875237-6875256 | None:intergenic | 35.0% | |
| AGAAATTCTTAGGTGGTTCA+GGG | + | chr8_4:6875303-6875322 | None:intergenic | 35.0% | |
| GGTAACTCCTTATATCTAGT+TGG | + | chr8_4:6875508-6875527 | None:intergenic | 35.0% | |
| ! | AGGGTGTTTAGATATATGGA+CGG | - | chr8_4:6875571-6875590 | Msa1310250:intron | 35.0% |
| GACATTATTCCCCTTACAAA+TGG | - | chr8_4:6875812-6875831 | Msa1310250:intron | 35.0% | |
| ATTGTGTATGATGTAGTGAG+TGG | + | chr8_4:6876490-6876509 | None:intergenic | 35.0% | |
| ATATGGATTCAGGAGTAGTA+AGG | + | chr8_4:6876646-6876665 | None:intergenic | 35.0% | |
| AATGGTACCTCTATTTCATG+TGG | - | chr8_4:6876717-6876736 | Msa1310250:intron | 35.0% | |
| !!! | GTTCTTGTCACTTGGTTTTA+TGG | - | chr8_4:6876758-6876777 | Msa1310250:intron | 35.0% |
| CCTCAAAACTTACTTGAACA+TGG | + | chr8_4:6876853-6876872 | None:intergenic | 35.0% | |
| ! | CCATGTTCAAGTAAGTTTTG+AGG | - | chr8_4:6876850-6876869 | Msa1310250:intron | 35.0% |
| AAGTTTAGGTCTTTCAAACC+AGG | - | chr8_4:6877030-6877049 | Msa1310250:CDS | 35.0% | |
| ATAAAATTAGAGGACTCACC+TGG | + | chr8_4:6877051-6877070 | None:intergenic | 35.0% | |
| GCATAAAATATGCAAAGGTC+CGG | - | chr8_4:6877209-6877228 | Msa1310250:intron | 35.0% | |
| CATAAAATATGCAAAGGTCC+GGG | - | chr8_4:6877210-6877229 | Msa1310250:intron | 35.0% | |
| ATAAAATATGCAAAGGTCCG+GGG | - | chr8_4:6877211-6877230 | Msa1310250:intron | 35.0% | |
| !!! | CATCTGTAGGTCTTTTTTGT+AGG | + | chr8_4:6877266-6877285 | None:intergenic | 35.0% |
| TTCCATCGAATTTCATCTGT+AGG | + | chr8_4:6877279-6877298 | None:intergenic | 35.0% | |
| GACACTTAGTCCTTCAAATA+AGG | - | chr8_4:6877535-6877554 | Msa1310250:intron | 35.0% | |
| TGGAATGCTGTTAAGAACAA+TGG | + | chr8_4:6877813-6877832 | None:intergenic | 35.0% | |
| GTTAATGCTTTGTGTGAAAG+GGG | - | chr8_4:6877890-6877909 | Msa1310250:intron | 35.0% | |
| GTTGTAACCTGAAAGAAAGA+AGG | + | chr8_4:6878058-6878077 | None:intergenic | 35.0% | |
| TGGGAAAACCAAATTCTTCT+GGG | + | chr8_4:6878131-6878150 | None:intergenic | 35.0% | |
| AATTTGCAGATATGGCTAGT+TGG | - | chr8_4:6878303-6878322 | Msa1310250:intron | 35.0% | |
| ! | GGTACAAACAATGATCCTTT+TGG | + | chr8_4:6878363-6878382 | None:intergenic | 35.0% |
| ! | GAAATTTCTTTGGAGGGAAT+TGG | + | chr8_4:6878392-6878411 | None:intergenic | 35.0% |
| TAAATTAGGGGGAGTTATCA+TGG | + | chr8_4:6878445-6878464 | None:intergenic | 35.0% | |
| TGGACATTGGATAAATTAGG+GGG | + | chr8_4:6878456-6878475 | None:intergenic | 35.0% | |
| GTGGACATTGGATAAATTAG+GGG | + | chr8_4:6878457-6878476 | None:intergenic | 35.0% | |
| GAGTGGACATTGGATAAATT+AGG | + | chr8_4:6878459-6878478 | None:intergenic | 35.0% | |
| AGGGGATGATTAATCTTCAA+TGG | + | chr8_4:6879060-6879079 | None:intergenic | 35.0% | |
| GGGTATAAGAGAAGAGTCAA+AGG | + | chr8_4:6871896-6871915 | None:intergenic | 40.0% | |
| !!! | CGCCATTTTTATGCCAAGAA+AGG | + | chr8_4:6871917-6871936 | None:intergenic | 40.0% |
| ATAAAAATGGCGTCCAAACC+TGG | - | chr8_4:6871925-6871944 | Msa1310250:three_prime_UTR | 40.0% | |
| ATCAGTAAGTATGCCAGGTT+TGG | + | chr8_4:6871941-6871960 | None:intergenic | 40.0% | |
| AACCTGGCATACTTACTGAT+TGG | - | chr8_4:6871941-6871960 | Msa1310250:three_prime_UTR | 40.0% | |
| ! | TGTGTGCTCTTTGCTATGAA+TGG | + | chr8_4:6872276-6872295 | None:intergenic | 40.0% |
| TGTGAATAGTCCTGAGGAAA+AGG | - | chr8_4:6872305-6872324 | Msa1310250:intron | 40.0% | |
| CCATCATATATGGGAAGATG+AGG | + | chr8_4:6872344-6872363 | None:intergenic | 40.0% | |
| CCTCATCTTCCCATATATGA+TGG | - | chr8_4:6872341-6872360 | Msa1310250:intron | 40.0% | |
| ! | TCTTCCCATATATGATGGTG+AGG | - | chr8_4:6872346-6872365 | Msa1310250:intron | 40.0% |
| GCATCCTCACCATCATATAT+GGG | + | chr8_4:6872353-6872372 | None:intergenic | 40.0% | |
| AGCATCCTCACCATCATATA+TGG | + | chr8_4:6872354-6872373 | None:intergenic | 40.0% | |
| GGATGCTACATGACCAAATT+TGG | - | chr8_4:6872367-6872386 | Msa1310250:intron | 40.0% | |
| ATTGAGATACGATATTGCCC+TGG | - | chr8_4:6872689-6872708 | Msa1310250:CDS | 40.0% | |
| TTACCCATATGGAGAACTAG+TGG | - | chr8_4:6872987-6873006 | Msa1310250:intron | 40.0% | |
| ! | ACACCACTAGTTCTCCATAT+GGG | + | chr8_4:6872993-6873012 | None:intergenic | 40.0% |
| TAGGCTATGTGTTCTGCAAA+TGG | + | chr8_4:6874091-6874110 | None:intergenic | 40.0% | |
| AGTAACACAGCTAAAACTCG+CGG | - | chr8_4:6874496-6874515 | Msa1310250:CDS | 40.0% | |
| AGACACGCTTCGAATAAGAT+TGG | - | chr8_4:6874611-6874630 | Msa1310250:CDS | 40.0% | |
| TAGCGGAAGTCATCTCATTA+AGG | - | chr8_4:6874680-6874699 | Msa1310250:intron | 40.0% | |
| TGAACCAGGACCAAGAAATT+TGG | - | chr8_4:6875163-6875182 | Msa1310250:intron | 40.0% | |
| CAAACCAAATTTCTTGGTCC+TGG | + | chr8_4:6875170-6875189 | None:intergenic | 40.0% | |
| ! | CAGGGCCTAGAAATTTTCTT+TGG | + | chr8_4:6875285-6875304 | None:intergenic | 40.0% |
| GAGAAATTCTTAGGTGGTTC+AGG | + | chr8_4:6875304-6875323 | None:intergenic | 40.0% | |
| TCACATTAAGTTAGGCAGCT+TGG | - | chr8_4:6875322-6875341 | Msa1310250:intron | 40.0% | |
| ! | ACTACCAAAGTACTCTAGGT+TGG | + | chr8_4:6875352-6875371 | None:intergenic | 40.0% |
| ! | AACCTAGAGTACTTTGGTAG+TGG | - | chr8_4:6875351-6875370 | Msa1310250:intron | 40.0% |
| TATCTAGTTGGGGAACGATT+TGG | + | chr8_4:6875496-6875515 | None:intergenic | 40.0% | |
| TCGTTCCCCAACTAGATATA+AGG | - | chr8_4:6875498-6875517 | Msa1310250:intron | 40.0% | |
| TGCTTACATATAAGGACGGA+TGG | + | chr8_4:6875529-6875548 | None:intergenic | 40.0% | |
| GTGTTTAGATATATGGACGG+AGG | - | chr8_4:6875574-6875593 | Msa1310250:intron | 40.0% | |
| ! | AGATAAGGAGTGCATCTCTT+AGG | + | chr8_4:6875650-6875669 | None:intergenic | 40.0% |
| TGCATCAAATCTAGTCGTGT+TGG | - | chr8_4:6875755-6875774 | Msa1310250:intron | 40.0% | |
| AGGTACCATTCAGAAGATTG+AGG | + | chr8_4:6876707-6876726 | None:intergenic | 40.0% | |
| TGAATGGCCACATGAAATAG+AGG | + | chr8_4:6876727-6876746 | None:intergenic | 40.0% | |
| AGAACAGACCAAAAGGTGAA+TGG | + | chr8_4:6876743-6876762 | None:intergenic | 40.0% | |
| AGTGACAAGAACAGACCAAA+AGG | + | chr8_4:6876750-6876769 | None:intergenic | 40.0% | |
| TTTGGTCTGTTCTTGTCACT+TGG | - | chr8_4:6876750-6876769 | Msa1310250:intron | 40.0% | |
| CTTACTTGAACATGGAACCT+TGG | + | chr8_4:6876845-6876864 | None:intergenic | 40.0% | |
| AGCAGAGTTGAGCAAAGTTA+AGG | - | chr8_4:6877003-6877022 | Msa1310250:CDS | 40.0% | |
| ! | TGAGCTTAGTTCAGTTGGTA+GGG | - | chr8_4:6877181-6877200 | Msa1310250:intron | 40.0% |
| GACCTACAGATGAAATTCGA+TGG | - | chr8_4:6877274-6877293 | Msa1310250:intron | 40.0% | |
| ! | GGAGACTTGCTCAATAGATA+TGG | - | chr8_4:6877719-6877738 | Msa1310250:intron | 40.0% |
| TCTTTGTGGTAGACTTGACA+AGG | - | chr8_4:6877853-6877872 | Msa1310250:intron | 40.0% | |
| !! | TTTGTGTGAAAGGGGTACTA+AGG | - | chr8_4:6877898-6877917 | Msa1310250:intron | 40.0% |
| CTGGGAAAACCAAATTCTTC+TGG | + | chr8_4:6878132-6878151 | None:intergenic | 40.0% | |
| !!! | CAGAAGAATTTGGTTTTCCC+AGG | - | chr8_4:6878130-6878149 | Msa1310250:CDS | 40.0% |
| CCTTTGCAGAATTTGATCCT+GGG | + | chr8_4:6878150-6878169 | None:intergenic | 40.0% | |
| ACCTTTGCAGAATTTGATCC+TGG | + | chr8_4:6878151-6878170 | None:intergenic | 40.0% | |
| TTTGGAGGGAATTGGGAAAA+TGG | + | chr8_4:6878384-6878403 | None:intergenic | 40.0% | |
| ATCTACTAACCTCACAAGAG+TGG | + | chr8_4:6878476-6878495 | None:intergenic | 40.0% | |
| TGCTTCAGGTATTATCAGCA+AGG | - | chr8_4:6879153-6879172 | Msa1310250:intron | 40.0% | |
| TTCCTCTGTACTAGCATTTG+TGG | - | chr8_4:6879225-6879244 | Msa1310250:exon | 40.0% | |
| ! | GCATACTTACTGATTGGCCA+TGG | - | chr8_4:6871947-6871966 | Msa1310250:three_prime_UTR | 45.0% |
| ! | TTACTGAGGTCCTTTTCCTC+AGG | + | chr8_4:6872318-6872337 | None:intergenic | 45.0% |
| GGAAGATGAGGAAGTTACTG+AGG | + | chr8_4:6872332-6872351 | None:intergenic | 45.0% | |
| ! | TTTTTCCTTTGGCGGTTCGA+TGG | + | chr8_4:6872407-6872426 | None:intergenic | 45.0% |
| ! | CACACCACTAGTTCTCCATA+TGG | + | chr8_4:6872994-6873013 | None:intergenic | 45.0% |
| CATATGGAGAACTAGTGGTG+TGG | - | chr8_4:6872992-6873011 | Msa1310250:intron | 45.0% | |
| !! | TCTTCTACATAGTGGACCAG+TGG | - | chr8_4:6873025-6873044 | Msa1310250:CDS | 45.0% |
| ! | GACGTAGCAATATAATGGGG+AGG | - | chr8_4:6873650-6873669 | Msa1310250:intron | 45.0% |
| GCATCCATAGCATCATTTGC+TGG | - | chr8_4:6874160-6874179 | Msa1310250:CDS | 45.0% | |
| GTCCCATTTCTCTTGAACCA+CGG | - | chr8_4:6874702-6874721 | Msa1310250:intron | 45.0% | |
| TGCCGTGGTTCAAGAGAAAT+GGG | + | chr8_4:6874707-6874726 | None:intergenic | 45.0% | |
| ATGCCGTGGTTCAAGAGAAA+TGG | + | chr8_4:6874708-6874727 | None:intergenic | 45.0% | |
| GAGAAACTCTTCTGTGAACC+AGG | - | chr8_4:6875149-6875168 | Msa1310250:intron | 45.0% | |
| ! | GACCACTACCAAAGTACTCT+AGG | + | chr8_4:6875356-6875375 | None:intergenic | 45.0% |
| ! | ATCTAGTCGTGTTGGTCATG+AGG | - | chr8_4:6875763-6875782 | Msa1310250:intron | 45.0% |
| ! | TCTAGTCGTGTTGGTCATGA+GGG | - | chr8_4:6875764-6875783 | Msa1310250:intron | 45.0% |
| TGTGTCAAATGCACCACATC+TGG | + | chr8_4:6876623-6876642 | None:intergenic | 45.0% | |
| TTCAGAAGATTGAGGTGAGG+AGG | + | chr8_4:6876699-6876718 | None:intergenic | 45.0% | |
| CCATTCAGAAGATTGAGGTG+AGG | + | chr8_4:6876702-6876721 | None:intergenic | 45.0% | |
| CCTCACCTCAATCTTCTGAA+TGG | - | chr8_4:6876699-6876718 | Msa1310250:intron | 45.0% | |
| ! | TCATGTGGCCATTCACCTTT+TGG | - | chr8_4:6876732-6876751 | Msa1310250:intron | 45.0% |
| GTGAGCTTAGTTCAGTTGGT+AGG | - | chr8_4:6877180-6877199 | Msa1310250:intron | 45.0% | |
| !! | GATTGTTGATGGCAGTAGCT+TGG | - | chr8_4:6877781-6877800 | Msa1310250:intron | 45.0% |
| !! | GTGAAAGGGGTACTAAGGTA+TGG | - | chr8_4:6877903-6877922 | Msa1310250:intron | 45.0% |
| !! | CAAATTCTTCTGGGACTTCG+AGG | + | chr8_4:6878122-6878141 | None:intergenic | 45.0% |
| CTCGAAGTCCCAGAAGAATT+TGG | - | chr8_4:6878120-6878139 | Msa1310250:CDS | 45.0% | |
| CCCAGGATCAAATTCTGCAA+AGG | - | chr8_4:6878147-6878166 | Msa1310250:CDS | 45.0% | |
| GCTAGTTGGAGATCAATGTG+AGG | - | chr8_4:6878317-6878336 | Msa1310250:intron | 45.0% | |
| AGTTGGAGATCAATGTGAGG+AGG | - | chr8_4:6878320-6878339 | Msa1310250:intron | 45.0% | |
| ATCCAATGTCCACTCTTGTG+AGG | - | chr8_4:6878464-6878483 | Msa1310250:intron | 45.0% | |
| AACCTCACAAGAGTGGACAT+TGG | + | chr8_4:6878469-6878488 | None:intergenic | 45.0% | |
| AGTCGTGAGTCGTGACATTA+AGG | + | chr8_4:6878738-6878757 | None:intergenic | 45.0% | |
| CATGCACTCATGACTCTTCT+TGG | + | chr8_4:6878925-6878944 | None:intergenic | 45.0% | |
| CAAGAAGAGTCATGAGTGCA+TGG | - | chr8_4:6878923-6878942 | Msa1310250:intron | 45.0% | |
| GGAATATTGCACGCCTTAGA+AGG | - | chr8_4:6878955-6878974 | Msa1310250:intron | 45.0% | |
| TATTGCACGCCTTAGAAGGT+TGG | - | chr8_4:6878959-6878978 | Msa1310250:intron | 45.0% | |
| ATTGCACGCCTTAGAAGGTT+GGG | - | chr8_4:6878960-6878979 | Msa1310250:intron | 45.0% | |
| ATGAACGTCCCAACCTTCTA+AGG | + | chr8_4:6878971-6878990 | None:intergenic | 45.0% | |
| !! | AATAAGATAAAAATTTAATT+CGG | - | chr8_4:6874815-6874834 | Msa1310250:intron | 5.0% |
| !! | TTATAATGAATTAAAATTAA+CGG | + | chr8_4:6874923-6874942 | None:intergenic | 5.0% |
| !! | TAAAATGTTAAATTAAATAA+AGG | + | chr8_4:6876260-6876279 | None:intergenic | 5.0% |
| !! | AAAATATTATAACATTTAAA+TGG | + | chr8_4:6877134-6877153 | None:intergenic | 5.0% |
| GGCCAATCAGTAAGTATGCC+AGG | + | chr8_4:6871946-6871965 | None:intergenic | 50.0% | |
| GAAACCTTGAATCTCCCGAG+AGG | + | chr8_4:6871976-6871995 | None:intergenic | 50.0% | |
| CCATGTGATTGAGTATGCCG+TGG | + | chr8_4:6874722-6874741 | None:intergenic | 50.0% | |
| CCACGGCATACTCAATCACA+TGG | - | chr8_4:6874719-6874738 | Msa1310250:intron | 50.0% | |
| ! | CCAAAGTACTCTAGGTTGGC+AGG | + | chr8_4:6875348-6875367 | None:intergenic | 50.0% |
| ! | CCTGCCAACCTAGAGTACTT+TGG | - | chr8_4:6875345-6875364 | Msa1310250:intron | 50.0% |
| ! | AGAAGAAGGTGCACCAGATG+TGG | - | chr8_4:6876607-6876626 | Msa1310250:intron | 50.0% |
| AGATTGAGGTGAGGAGGCTA+AGG | + | chr8_4:6876693-6876712 | None:intergenic | 50.0% | |
| CCAACTGAACTAAGCTCACG+AGG | + | chr8_4:6877179-6877198 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAGTTCAGT+TGG | - | chr8_4:6877176-6877195 | Msa1310250:intron | 50.0% | |
| ! | TTGTGGTGGAGTTTGAACCC+CGG | + | chr8_4:6877231-6877250 | None:intergenic | 50.0% |
| TGATGGCAGTAGCTTGGTTG+TGG | - | chr8_4:6877787-6877806 | Msa1310250:intron | 50.0% | |
| TTAGGGGGAGTTATCATGGC+TGG | + | chr8_4:6878441-6878460 | None:intergenic | 50.0% | |
| ATGAGTGCATGGCGTATTGC+TGG | - | chr8_4:6878934-6878953 | Msa1310250:intron | 50.0% | |
| GGTTGGGACGTTCATGAATG+TGG | - | chr8_4:6878976-6878995 | Msa1310250:intron | 50.0% | |
| TGGCAAGCAAGTCTTCAGCA+TGG | - | chr8_4:6879027-6879046 | Msa1310250:intron | 50.0% | |
| GGCAAGCAAGTCTTCAGCAT+GGG | - | chr8_4:6879028-6879047 | Msa1310250:intron | 50.0% | |
| CGCCACAAATGCTAGTACAG+AGG | + | chr8_4:6879230-6879249 | None:intergenic | 50.0% | |
| ! | GATTGGCCATGGACACCTCT+CGG | - | chr8_4:6871958-6871977 | Msa1310250:three_prime_UTR | 55.0% |
| ATTGGCCATGGACACCTCTC+GGG | - | chr8_4:6871959-6871978 | Msa1310250:three_prime_UTR | 55.0% | |
| !! | AATCTCCCGAGAGGTGTCCA+TGG | + | chr8_4:6871967-6871986 | None:intergenic | 55.0% |
| GACACCTCTCGGGAGATTCA+AGG | - | chr8_4:6871969-6871988 | Msa1310250:three_prime_UTR | 55.0% | |
| AAGCTCACGAGGACGTCTGT+AGG | + | chr8_4:6877168-6877187 | None:intergenic | 55.0% | |
| TCTCGCCATCGAACCGCCAA+AGG | - | chr8_4:6872399-6872418 | Msa1310250:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 6871841 | 6879325 | 6871841 | ID=Msa1310250;Name=Msa1310250 |
| chr8_4 | mRNA | 6871841 | 6879325 | 6871841 | ID=Msa1310250-mRNA-1;Parent=Msa1310250;Name=Msa1310250-mRNA-1;_AED=0.09;_eAED=0.09;_QI=90|1|1|1|1|1|10|239|622 |
| chr8_4 | exon | 6871841 | 6872253 | 6871841 | ID=Msa1310250-mRNA-1:exon:2361;Parent=Msa1310250-mRNA-1 |
| chr8_4 | exon | 6872681 | 6872854 | 6872681 | ID=Msa1310250-mRNA-1:exon:2360;Parent=Msa1310250-mRNA-1 |
| chr8_4 | exon | 6872998 | 6873096 | 6872998 | ID=Msa1310250-mRNA-1:exon:2359;Parent=Msa1310250-mRNA-1 |
| chr8_4 | exon | 6873247 | 6873447 | 6873247 | ID=Msa1310250-mRNA-1:exon:2358;Parent=Msa1310250-mRNA-1 |
| chr8_4 | exon | 6874115 | 6874222 | 6874115 | ID=Msa1310250-mRNA-1:exon:2357;Parent=Msa1310250-mRNA-1 |
| chr8_4 | exon | 6874307 | 6874682 | 6874307 | ID=Msa1310250-mRNA-1:exon:2356;Parent=Msa1310250-mRNA-1 |
| chr8_4 | exon | 6876870 | 6877089 | 6876870 | ID=Msa1310250-mRNA-1:exon:2355;Parent=Msa1310250-mRNA-1 |
| chr8_4 | exon | 6878017 | 6878249 | 6878017 | ID=Msa1310250-mRNA-1:exon:2354;Parent=Msa1310250-mRNA-1 |
| chr8_4 | exon | 6878685 | 6878908 | 6878685 | ID=Msa1310250-mRNA-1:exon:2353;Parent=Msa1310250-mRNA-1 |
| chr8_4 | exon | 6879176 | 6879325 | 6879176 | ID=Msa1310250-mRNA-1:exon:2352;Parent=Msa1310250-mRNA-1 |
| chr8_4 | five_prime_UTR | 6879236 | 6879325 | 6879236 | ID=Msa1310250-mRNA-1:five_prime_utr;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6879176 | 6879235 | 6879176 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6878685 | 6878908 | 6878685 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6878017 | 6878249 | 6878017 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6876870 | 6877089 | 6876870 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6874307 | 6874682 | 6874307 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6874115 | 6874222 | 6874115 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6873247 | 6873447 | 6873247 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6872998 | 6873096 | 6872998 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6872681 | 6872854 | 6872681 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | CDS | 6872080 | 6872253 | 6872080 | ID=Msa1310250-mRNA-1:cds;Parent=Msa1310250-mRNA-1 |
| chr8_4 | three_prime_UTR | 6871841 | 6872079 | 6871841 | ID=Msa1310250-mRNA-1:three_prime_utr;Parent=Msa1310250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
