Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636720 | XP_013456765.1 | 96.296 | 189 | 7 | 0 | 1 | 189 | 1 | 189 | 8.79e-129 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636720 | A0A072UN48 | 96.296 | 189 | 7 | 0 | 1 | 189 | 1 | 189 | 4.20e-129 | 369 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002270 | Msa0636720 | 0.812317 | 4.505200e-51 | -8.615850e-47 |
| Msa0012380 | Msa0636720 | 0.851720 | 7.384859e-61 | -8.615850e-47 |
| Msa0026110 | Msa0636720 | 0.804715 | 1.891451e-49 | -8.615850e-47 |
| Msa0037270 | Msa0636720 | 0.805606 | 1.231041e-49 | -8.615850e-47 |
| Msa0044180 | Msa0636720 | 0.840622 | 7.782167e-58 | -8.615850e-47 |
| Msa0046050 | Msa0636720 | 0.850931 | 1.234209e-60 | -8.615850e-47 |
| Msa0064550 | Msa0636720 | 0.820547 | 6.476658e-53 | -8.615850e-47 |
| Msa0065400 | Msa0636720 | 0.802356 | 5.833367e-49 | -8.615850e-47 |
| Msa0069540 | Msa0636720 | 0.816580 | 5.139314e-52 | -8.615850e-47 |
| Msa0081120 | Msa0636720 | 0.817321 | 3.503974e-52 | -8.615850e-47 |
| Msa0089510 | Msa0636720 | 0.843653 | 1.227363e-58 | -8.615850e-47 |
| Msa0089520 | Msa0636720 | 0.844760 | 6.193608e-59 | -8.615850e-47 |
| Msa0090860 | Msa0636720 | 0.832401 | 9.654769e-56 | -8.615850e-47 |
| Msa0604880 | Msa0636720 | 0.836381 | 9.677357e-57 | -8.615850e-47 |
| Msa0605250 | Msa0636720 | 0.854147 | 1.493382e-61 | -8.615850e-47 |
| Msa0609790 | Msa0636720 | 0.980463 | 2.810100e-150 | -8.615850e-47 |
| Msa0614980 | Msa0636720 | 0.806271 | 8.918890e-50 | -8.615850e-47 |
| Msa0617120 | Msa0636720 | 0.802374 | 5.781695e-49 | -8.615850e-47 |
| Msa0619350 | Msa0636720 | 0.804381 | 2.219959e-49 | -8.615850e-47 |
| Msa0622250 | Msa0636720 | 0.853189 | 2.816521e-61 | -8.615850e-47 |
| Msa0624040 | Msa0636720 | 0.805294 | 1.430760e-49 | -8.615850e-47 |
| Msa0627050 | Msa0636720 | 0.839451 | 1.572671e-57 | -8.615850e-47 |
| Msa0636720 | Msa0644630 | 0.847297 | 1.264624e-59 | -8.615850e-47 |
| Msa0636720 | Msa0645040 | 0.808955 | 2.400980e-50 | -8.615850e-47 |
| Msa0636720 | Msa0646190 | 0.874675 | 5.612379e-68 | -8.615850e-47 |
| Msa0636720 | Msa0649310 | 0.808191 | 3.495878e-50 | -8.615850e-47 |
| Msa0636720 | Msa0681210 | 0.849193 | 3.782874e-60 | -8.615850e-47 |
| Msa0636720 | Msa0684520 | 0.828046 | 1.117631e-54 | -8.615850e-47 |
| Msa0636720 | Msa0685890 | 0.843652 | 1.228584e-58 | -8.615850e-47 |
| Msa0636720 | Msa0692420 | 0.813726 | 2.212668e-51 | -8.615850e-47 |
| Msa0636720 | Msa0705810 | 0.821182 | 4.625005e-53 | -8.615850e-47 |
| Msa0636720 | Msa0738880 | 0.848109 | 7.557767e-60 | -8.615850e-47 |
| Msa0636720 | Msa0742090 | 0.831651 | 1.478916e-55 | -8.615850e-47 |
| Msa0636720 | Msa0742160 | 0.813551 | 2.417795e-51 | -8.615850e-47 |
| Msa0636720 | Msa0745010 | 0.801482 | 8.819435e-49 | -8.615850e-47 |
| Msa0636720 | Msa0748330 | 0.850219 | 1.956228e-60 | -8.615850e-47 |
| Msa0636720 | Msa0783280 | 0.826920 | 2.081906e-54 | -8.615850e-47 |
| Msa0636720 | Msa0786060 | 0.802774 | 4.782523e-49 | -8.615850e-47 |
| Msa0636720 | Msa0786100 | 0.800552 | 1.366452e-48 | -8.615850e-47 |
| Msa0636720 | Msa0790640 | 0.862592 | 4.544442e-64 | -8.615850e-47 |
| Msa0636720 | Msa0793100 | 0.857323 | 1.765414e-62 | -8.615850e-47 |
| Msa0636720 | Msa0806720 | 0.869722 | 2.502658e-66 | -8.615850e-47 |
| Msa0636720 | Msa0806760 | 0.862036 | 6.734390e-64 | -8.615850e-47 |
| Msa0636720 | Msa0819320 | 0.856000 | 4.322840e-62 | -8.615850e-47 |
| Msa0636720 | Msa0819370 | 0.853011 | 3.167126e-61 | -8.615850e-47 |
| Msa0636720 | Msa0823310 | 0.828108 | 1.079572e-54 | -8.615850e-47 |
| Msa0636720 | Msa0823420 | 0.800748 | 1.245974e-48 | -8.615850e-47 |
| Msa0636720 | Msa0859510 | 0.808986 | 2.364815e-50 | -8.615850e-47 |
| Msa0636720 | Msa0862290 | 0.810662 | 1.030863e-50 | -8.615850e-47 |
| Msa0636720 | Msa0882700 | 0.815770 | 7.795573e-52 | -8.615850e-47 |
| Msa0636720 | Msa0887280 | 0.800873 | 1.174986e-48 | -8.615850e-47 |
| Msa0636720 | Msa0910010 | 0.806539 | 7.830699e-50 | -8.615850e-47 |
| Msa0636720 | Msa0913260 | 0.803455 | 3.457470e-49 | -8.615850e-47 |
| Msa0636720 | Msa0929530 | 0.862839 | 3.812633e-64 | -8.615850e-47 |
| Msa0636720 | Msa0929940 | 0.859218 | 4.816233e-63 | -8.615850e-47 |
| Msa0636720 | Msa0944690 | 0.840370 | 9.059453e-58 | -8.615850e-47 |
| Msa0636720 | Msa0945960 | 0.845202 | 4.703040e-59 | -8.615850e-47 |
| Msa0636720 | Msa0968780 | 0.827903 | 1.209614e-54 | -8.615850e-47 |
| Msa0636720 | Msa0984000 | 0.843040 | 1.788792e-58 | -8.615850e-47 |
| Msa0636720 | Msa1019230 | -0.802409 | 5.686716e-49 | -8.615850e-47 |
| Msa0636720 | Msa1030870 | 0.859806 | 3.205097e-63 | -8.615850e-47 |
| Msa0636720 | Msa1034930 | 0.817379 | 3.400686e-52 | -8.615850e-47 |
| Msa0636720 | Msa1036250 | 0.811249 | 7.693916e-51 | -8.615850e-47 |
| Msa0636720 | Msa1040390 | 0.803475 | 3.424217e-49 | -8.615850e-47 |
| Msa0636720 | Msa1069960 | 0.863885 | 1.808329e-64 | -8.615850e-47 |
| Msa0636720 | Msa1074980 | 0.813871 | 2.055585e-51 | -8.615850e-47 |
| Msa0636720 | Msa1076520 | 0.806065 | 9.857675e-50 | -8.615850e-47 |
| Msa0636720 | Msa1079480 | 0.827806 | 1.276094e-54 | -8.615850e-47 |
| Msa0636720 | Msa1082150 | 0.832196 | 1.084883e-55 | -8.615850e-47 |
| Msa0636720 | Msa1083140 | 0.807714 | 4.415799e-50 | -8.615850e-47 |
| Msa0636720 | Msa1118460 | 0.843378 | 1.453883e-58 | -8.615850e-47 |
| Msa0636720 | Msa1119860 | 0.860992 | 1.402348e-63 | -8.615850e-47 |
| Msa0636720 | Msa1122720 | 0.807024 | 6.187142e-50 | -8.615850e-47 |
| Msa0636720 | Msa1127900 | 0.819971 | 8.775667e-53 | -8.615850e-47 |
| Msa0636720 | Msa1133740 | 0.811180 | 7.965647e-51 | -8.615850e-47 |
| Msa0636720 | Msa1144730 | 0.884058 | 2.651678e-71 | -8.615850e-47 |
| Msa0636720 | Msa1144950 | 0.847130 | 1.404751e-59 | -8.615850e-47 |
| Msa0636720 | Msa1165810 | 0.829823 | 4.149009e-55 | -8.615850e-47 |
| Msa0636720 | Msa1173380 | 0.831608 | 1.516132e-55 | -8.615850e-47 |
| Msa0636720 | Msa1181510 | 0.832580 | 8.717589e-56 | -8.615850e-47 |
| Msa0636720 | Msa1184010 | 0.814484 | 1.505146e-51 | -8.615850e-47 |
| Msa0636720 | Msa1220680 | 0.818758 | 1.658785e-52 | -8.615850e-47 |
| Msa0636720 | Msa1228350 | 0.831836 | 1.332104e-55 | -8.615850e-47 |
| Msa0636720 | Msa1228460 | 0.801065 | 1.073314e-48 | -8.615850e-47 |
| Msa0636720 | Msa1229640 | 0.828490 | 8.732420e-55 | -8.615850e-47 |
| Msa0636720 | Msa1239900 | 0.837599 | 4.727412e-57 | -8.615850e-47 |
| Msa0636720 | Msa1255020 | 0.841129 | 5.731090e-58 | -8.615850e-47 |
| Msa0636720 | Msa1263590 | 0.804981 | 1.663757e-49 | -8.615850e-47 |
| Msa0636720 | Msa1263670 | 0.801663 | 8.095610e-49 | -8.615850e-47 |
| Msa0636720 | Msa1272340 | 0.834856 | 2.353169e-56 | -8.615850e-47 |
| Msa0636720 | Msa1281270 | 0.830463 | 2.896123e-55 | -8.615850e-47 |
| Msa0636720 | Msa1293050 | 0.820119 | 8.118612e-53 | -8.615850e-47 |
| Msa0636720 | Msa1295470 | 0.836066 | 1.163296e-56 | -8.615850e-47 |
| Msa0636720 | Msa1310250 | 0.821470 | 3.969354e-53 | -8.615850e-47 |
| Msa0636720 | Msa1320380 | 0.842784 | 2.093027e-58 | -8.615850e-47 |
| Msa0636720 | Msa1338590 | 0.819296 | 1.251529e-52 | -8.615850e-47 |
| Msa0636720 | Msa1340540 | 0.811721 | 6.076431e-51 | -8.615850e-47 |
| Msa0636720 | Msa1349810 | 0.844554 | 7.034863e-59 | -8.615850e-47 |
| Msa0636720 | Msa1354090 | 0.848037 | 7.910966e-60 | -8.615850e-47 |
| Msa0636720 | Msa1358340 | 0.866436 | 2.854517e-65 | -8.615850e-47 |
| Msa0636720 | Msa1359890 | 0.881532 | 2.219627e-70 | -8.615850e-47 |
| Msa0636720 | Msa1369180 | 0.818492 | 1.906152e-52 | -8.615850e-47 |
| Msa0636720 | Msa1373390 | 0.865904 | 4.210576e-65 | -8.615850e-47 |
| Msa0636720 | Msa1375780 | 0.850794 | 1.348916e-60 | -8.615850e-47 |
| Msa0636720 | Msa1394900 | 0.861462 | 1.008531e-63 | -8.615850e-47 |
| Msa0636720 | Msa1404690 | 0.804203 | 2.417887e-49 | -8.615850e-47 |
| Msa0636720 | Msa1405380 | 0.821079 | 4.885499e-53 | -8.615850e-47 |
| Msa0636720 | Msa1406020 | 0.814301 | 1.651809e-51 | -8.615850e-47 |
| Msa0636720 | Msa1411830 | 0.813673 | 2.272272e-51 | -8.615850e-47 |
| Msa0636720 | Msa1434660 | 0.842709 | 2.190951e-58 | -8.615850e-47 |
| Msa0636720 | Msa1459540 | 0.837936 | 3.872472e-57 | -8.615850e-47 |
| Msa0636720 | Msa1466350 | 0.826990 | 2.002887e-54 | -8.615850e-47 |
| Msa0140290 | Msa0636720 | 0.849474 | 3.160434e-60 | -8.615850e-47 |
| Msa0154220 | Msa0636720 | 0.836130 | 1.120366e-56 | -8.615850e-47 |
| Msa0154240 | Msa0636720 | 0.818282 | 2.126263e-52 | -8.615850e-47 |
| Msa0154270 | Msa0636720 | 0.849667 | 2.790816e-60 | -8.615850e-47 |
| Msa0171920 | Msa0636720 | 0.833377 | 5.522558e-56 | -8.615850e-47 |
| Msa0178940 | Msa0636720 | 0.815830 | 7.562059e-52 | -8.615850e-47 |
| Msa0183560 | Msa0636720 | 0.821491 | 3.925201e-53 | -8.615850e-47 |
| Msa0187980 | Msa0636720 | 0.801270 | 9.744706e-49 | -8.615850e-47 |
| Msa0197030 | Msa0636720 | 0.846557 | 2.015279e-59 | -8.615850e-47 |
| Msa0216390 | Msa0636720 | 0.854646 | 1.071533e-61 | -8.615850e-47 |
| Msa0216790 | Msa0636720 | 0.805544 | 1.267973e-49 | -8.615850e-47 |
| Msa0380650 | Msa0636720 | 0.809982 | 1.445275e-50 | -8.615850e-47 |
| Msa0382590 | Msa0636720 | 0.858399 | 8.459799e-63 | -8.615850e-47 |
| Msa0387970 | Msa0636720 | 0.814049 | 1.877567e-51 | -8.615850e-47 |
| Msa0392050 | Msa0636720 | 0.882918 | 6.956800e-71 | -8.615850e-47 |
| Msa0392540 | Msa0636720 | 0.839890 | 1.208655e-57 | -8.615850e-47 |
| Msa0393880 | Msa0636720 | 0.859944 | 2.911846e-63 | -8.615850e-47 |
| Msa0401340 | Msa0636720 | 0.818466 | 1.931871e-52 | -8.615850e-47 |
| Msa0404060 | Msa0636720 | 0.823761 | 1.163568e-53 | -8.615850e-47 |
| Msa0404070 | Msa0636720 | 0.861337 | 1.101108e-63 | -8.615850e-47 |
| Msa0416540 | Msa0636720 | 0.809949 | 1.469460e-50 | -8.615850e-47 |
| Msa0430290 | Msa0636720 | 0.814618 | 1.405266e-51 | -8.615850e-47 |
| Msa0432720 | Msa0636720 | 0.868224 | 7.652824e-66 | -8.615850e-47 |
| Msa0437550 | Msa0636720 | 0.846951 | 1.572631e-59 | -8.615850e-47 |
| Msa0437790 | Msa0636720 | 0.864315 | 1.328212e-64 | -8.615850e-47 |
| Msa0440310 | Msa0636720 | 0.814171 | 1.765126e-51 | -8.615850e-47 |
| Msa0441670 | Msa0636720 | 0.859160 | 5.013401e-63 | -8.615850e-47 |
| Msa0463150 | Msa0636720 | 0.801614 | 8.284719e-49 | -8.615850e-47 |
| Msa0469950 | Msa0636720 | 0.883714 | 3.550755e-71 | -8.615850e-47 |
| Msa0472270 | Msa0636720 | 0.823734 | 1.180737e-53 | -8.615850e-47 |
| Msa0480430 | Msa0636720 | 0.839129 | 1.905905e-57 | -8.615850e-47 |
| Msa0481490 | Msa0636720 | 0.834941 | 2.239333e-56 | -8.615850e-47 |
| Msa0238860 | Msa0636720 | 0.847449 | 1.148616e-59 | -8.615850e-47 |
| Msa0242290 | Msa0636720 | 0.807827 | 4.179521e-50 | -8.615850e-47 |
| Msa0253160 | Msa0636720 | 0.847075 | 1.454443e-59 | -8.615850e-47 |
| Msa0256590 | Msa0636720 | 0.813354 | 2.671375e-51 | -8.615850e-47 |
| Msa0260190 | Msa0636720 | 0.823998 | 1.024132e-53 | -8.615850e-47 |
| Msa0265580 | Msa0636720 | 0.802134 | 6.479553e-49 | -8.615850e-47 |
| Msa0276590 | Msa0636720 | 0.831662 | 1.470090e-55 | -8.615850e-47 |
| Msa0280500 | Msa0636720 | 0.802487 | 5.482321e-49 | -8.615850e-47 |
| Msa0291940 | Msa0636720 | 0.845202 | 4.704870e-59 | -8.615850e-47 |
| Msa0295570 | Msa0636720 | 0.822195 | 2.697620e-53 | -8.615850e-47 |
| Msa0295730 | Msa0636720 | 0.828677 | 7.872013e-55 | -8.615850e-47 |
| Msa0296000 | Msa0636720 | 0.813450 | 2.543461e-51 | -8.615850e-47 |
| Msa0303440 | Msa0636720 | 0.819943 | 8.905053e-53 | -8.615850e-47 |
| Msa0303500 | Msa0636720 | 0.811993 | 5.301297e-51 | -8.615850e-47 |
| Msa0306160 | Msa0636720 | 0.801623 | 8.250589e-49 | -8.615850e-47 |
| Msa0316610 | Msa0636720 | 0.834515 | 2.866006e-56 | -8.615850e-47 |
| Msa0329910 | Msa0636720 | 0.807599 | 4.671122e-50 | -8.615850e-47 |
| Msa0334280 | Msa0636720 | 0.842474 | 2.529289e-58 | -8.615850e-47 |
| Msa0344680 | Msa0636720 | 0.883676 | 3.666141e-71 | -8.615850e-47 |
| Msa0346790 | Msa0636720 | 0.803784 | 2.955501e-49 | -8.615850e-47 |
| Msa0347280 | Msa0636720 | 0.844222 | 8.639993e-59 | -8.615850e-47 |
| Msa0489330 | Msa0636720 | 0.848746 | 5.035971e-60 | -8.615850e-47 |
| Msa0510510 | Msa0636720 | 0.800850 | 1.187615e-48 | -8.615850e-47 |
| Msa0515460 | Msa0636720 | 0.800416 | 1.456424e-48 | -8.615850e-47 |
| Msa0524960 | Msa0636720 | 0.844300 | 8.234008e-59 | -8.615850e-47 |
| Msa0525270 | Msa0636720 | 0.901173 | 3.501340e-78 | -8.615850e-47 |
| Msa0525280 | Msa0636720 | 0.905234 | 5.322304e-80 | -8.615850e-47 |
| Msa0530340 | Msa0636720 | 0.831889 | 1.292275e-55 | -8.615850e-47 |
| Msa0546080 | Msa0636720 | 0.824271 | 8.833523e-54 | -8.615850e-47 |
| Msa0548210 | Msa0636720 | 0.838214 | 3.285125e-57 | -8.615850e-47 |
| Msa0549540 | Msa0636720 | 0.861974 | 7.036524e-64 | -8.615850e-47 |
| Msa0549760 | Msa0636720 | 0.888683 | 4.751165e-73 | -8.615850e-47 |
| Msa0556070 | Msa0636720 | 0.805830 | 1.104363e-49 | -8.615850e-47 |
| Msa0557490 | Msa0636720 | 0.863365 | 2.622467e-64 | -8.615850e-47 |
| Msa0575670 | Msa0636720 | 0.818269 | 2.140936e-52 | -8.615850e-47 |
| Msa0584280 | Msa0636720 | 0.807972 | 3.892743e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636720 | MtrunA17_Chr4g0042741 | 96.296 | 189 | 7 | 0 | 1 | 189 | 1 | 189 | 8.08e-133 | 369 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 74 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCGCAAATTTACCAATAT+TGG | 0.193750 | 4_3:-27629158 | None:intergenic |
| AATTGTGAGGGTGGCTTCTA+AGG | 0.266560 | 4_3:+27625518 | Msa0636720:CDS |
| ACCGCGTTGCAGCCCGCGTC+GGG | 0.276137 | 4_3:-27625434 | None:intergenic |
| GGCTGCAACGCGGTTGGATT+GGG | 0.277741 | 4_3:+27625443 | Msa0636720:CDS |
| AAACAACAATATTGAAGTTC+AGG | 0.324417 | 4_3:+27625296 | Msa0636720:CDS |
| GGGCTGCAACGCGGTTGGAT+TGG | 0.330424 | 4_3:+27625442 | Msa0636720:CDS |
| ATCATCACGTCGCAAGGTTC+AGG | 0.345575 | 4_3:+27629098 | Msa0636720:CDS |
| AATGTAGAAACTATAGTTGT+AGG | 0.350897 | 4_3:+27625189 | Msa0636720:five_prime_UTR |
| GTATCACTATTACAATTTGC+AGG | 0.370713 | 4_3:+27629283 | Msa0636720:three_prime_UTR |
| ATTGCAGAGTCAACCAATAT+TGG | 0.382743 | 4_3:+27629145 | Msa0636720:three_prime_UTR |
| TGGTCAATTACGTGCGTGGC+TGG | 0.395524 | 4_3:+27625573 | Msa0636720:CDS |
| ATTCCGAACCGTCCACCTTC+CGG | 0.399012 | 4_3:-27625647 | None:intergenic |
| TTGTAAAGTGTATATGAGTT+TGG | 0.406289 | 4_3:+27629201 | Msa0636720:three_prime_UTR |
| CGTAACTATGCAATGTGTGC+GGG | 0.429868 | 4_3:+27625543 | Msa0636720:CDS |
| ACGGTTCGGAATATCTTCTT+AGG | 0.438601 | 4_3:+27625658 | Msa0636720:CDS |
| TTACGGTAATATTTATATGC+AGG | 0.450893 | 4_3:-27629233 | None:intergenic |
| AGGAAATTCCTTCTTCATGA+TGG | 0.453632 | 4_3:-27625365 | None:intergenic |
| GAAGAAGAAGAACAAGAAGA+AGG | 0.463375 | 4_3:-27625333 | None:intergenic |
| TCGCCGGAAGGTGGACGGTT+CGG | 0.463920 | 4_3:+27625644 | Msa0636720:CDS |
| AACCGCGTTGCAGCCCGCGT+CGG | 0.468668 | 4_3:-27625435 | None:intergenic |
| AACCTTGCGACGTGATGATA+AGG | 0.469622 | 4_3:-27629094 | None:intergenic |
| TGTAGCTGTGACGGCGGTGT+TGG | 0.471963 | 4_3:+27625599 | Msa0636720:CDS |
| CGGCGGTGTTGGTTTACGTC+GGG | 0.474783 | 4_3:+27625610 | Msa0636720:CDS |
| GACGCGGGCTGCAACGCGGT+TGG | 0.485105 | 4_3:+27625437 | Msa0636720:CDS |
| TGGTTTACGTCGGGATTCAA+AGG | 0.489575 | 4_3:+27625619 | Msa0636720:CDS |
| AACGGAACTTGACGCCGTCA+TGG | 0.509958 | 4_3:-27625391 | None:intergenic |
| TTCACCTTCCTCGCCACCAA+CGG | 0.518986 | 4_3:-27625409 | None:intergenic |
| TGAAATGAATAAGATGTTGA+AGG | 0.521333 | 4_3:+27625470 | Msa0636720:CDS |
| CACACCACTCTCGAATCCTC+TGG | 0.521436 | 4_3:+27625249 | Msa0636720:CDS |
| TCGGGATTCAAAGGCGTCGC+CGG | 0.522229 | 4_3:+27625628 | Msa0636720:CDS |
| ACGGCGTCAAGTTCCGTTGG+TGG | 0.523122 | 4_3:+27625396 | Msa0636720:CDS |
| AACAACAATATTGAAGTTCA+GGG | 0.523883 | 4_3:+27625297 | Msa0636720:CDS |
| ACGGAACTTGACGCCGTCAT+GGG | 0.524511 | 4_3:-27625390 | None:intergenic |
| AGTTCCGTTGGTGGCGAGGA+AGG | 0.531811 | 4_3:+27625405 | Msa0636720:CDS |
| GTCAAGTTCCGTTGGTGGCG+AGG | 0.531974 | 4_3:+27625401 | Msa0636720:CDS |
| CCGCGTTGCAGCCCGCGTCG+GGG | 0.537525 | 4_3:-27625433 | None:intergenic |
| ACTTGACGCCGTCATGGGCG+AGG | 0.539198 | 4_3:-27625385 | None:intergenic |
| TCAAAGGCGTCGCCGGAAGG+TGG | 0.547716 | 4_3:+27625635 | Msa0636720:CDS |
| CCCCGACGCGGGCTGCAACG+CGG | 0.549132 | 4_3:+27625433 | Msa0636720:CDS |
| GTGCAATATTAAGCAAGAGT+TGG | 0.550580 | 4_3:-27629059 | None:intergenic |
| GGAAATTCCTTCTTCATGAT+GGG | 0.551150 | 4_3:-27625364 | None:intergenic |
| GTTCAGGTGCATCGAATTAG+CGG | 0.554308 | 4_3:+27629114 | Msa0636720:CDS |
| TAAGATGTTGAAGGTGCGGA+TGG | 0.561256 | 4_3:+27625479 | Msa0636720:CDS |
| TTCTTCATGATGGGTAGGAG+TGG | 0.563504 | 4_3:-27625355 | None:intergenic |
| GGAAGGTGAAGCCCCGACGC+GGG | 0.567663 | 4_3:+27625422 | Msa0636720:CDS |
| GGCTGGAGCTGTAGCTGTGA+CGG | 0.568693 | 4_3:+27625590 | Msa0636720:CDS |
| ACTCCTACCCATCATGAAGA+AGG | 0.569002 | 4_3:+27625357 | Msa0636720:CDS |
| ATTCCTTCTTCATGATGGGT+AGG | 0.572462 | 4_3:-27625360 | None:intergenic |
| ATGACGGCGTCAAGTTCCGT+TGG | 0.572657 | 4_3:+27625393 | Msa0636720:CDS |
| GATTCAAAGGCGTCGCCGGA+AGG | 0.574232 | 4_3:+27625632 | Msa0636720:CDS |
| AGGAATTTCCTCGCCCATGA+CGG | 0.575563 | 4_3:+27625377 | Msa0636720:CDS |
| ACGGCGGTGTTGGTTTACGT+CGG | 0.576717 | 4_3:+27625609 | Msa0636720:CDS |
| AGGCGTCGCCGGAAGGTGGA+CGG | 0.577749 | 4_3:+27625639 | Msa0636720:CDS |
| GTAACTATGCAATGTGTGCG+GGG | 0.581011 | 4_3:+27625544 | Msa0636720:CDS |
| AGAAACTATAGTTGTAGGCA+TGG | 0.582478 | 4_3:+27625194 | Msa0636720:exon |
| AGCCTTATCATCACGTCGCA+AGG | 0.587604 | 4_3:+27629092 | Msa0636720:CDS |
| CCACTCTCGAATCCTCTGGA+TGG | 0.589063 | 4_3:+27625253 | Msa0636720:CDS |
| GAAGAAGAACAAGAAGAAGG+AGG | 0.590130 | 4_3:-27625330 | None:intergenic |
| GATTATTCTGTTCCATCCAG+AGG | 0.593351 | 4_3:-27625265 | None:intergenic |
| GATGTTGAAGGTGCGGATGG+AGG | 0.600823 | 4_3:+27625482 | Msa0636720:CDS |
| GCGGATGGAGGCTATGAGAG+TGG | 0.619387 | 4_3:+27625494 | Msa0636720:CDS |
| ACAATATTGAAGTTCAGGGA+GGG | 0.623670 | 4_3:+27625301 | Msa0636720:CDS |
| TCGTAACTATGCAATGTGTG+CGG | 0.627278 | 4_3:+27625542 | Msa0636720:CDS |
| CCATCCAGAGGATTCGAGAG+TGG | 0.631254 | 4_3:-27625253 | None:intergenic |
| TGGAGCTGTAGCTGTGACGG+CGG | 0.631922 | 4_3:+27625593 | Msa0636720:CDS |
| AACTATAGTTGTAGGCATGG+AGG | 0.645982 | 4_3:+27625197 | Msa0636720:exon |
| AACAATATTGAAGTTCAGGG+AGG | 0.646038 | 4_3:+27625300 | Msa0636720:CDS |
| TAACTATGCAATGTGTGCGG+GGG | 0.646393 | 4_3:+27625545 | Msa0636720:CDS |
| TGAATAAGATGTTGAAGGTG+CGG | 0.652058 | 4_3:+27625475 | Msa0636720:CDS |
| AGGAAGGTGAAGCCCCGACG+CGG | 0.653291 | 4_3:+27625421 | Msa0636720:CDS |
| CTATGAGAGTGGAAATTGTG+AGG | 0.658550 | 4_3:+27625505 | Msa0636720:CDS |
| GAGAGTGGAAATTGTGAGGG+TGG | 0.678186 | 4_3:+27625509 | Msa0636720:CDS |
| TATGAGAGTGGAAATTGTGA+GGG | 0.682385 | 4_3:+27625506 | Msa0636720:CDS |
| GCATGGAGGAAATAAACGAG+TGG | 0.717528 | 4_3:+27625211 | Msa0636720:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAAAATTAATAAA+AGG | - | chr4_3:27626139-27626158 | None:intergenic | 0.0% |
| !! | TTGATAAAATAAAATATGTT+TGG | + | chr4_3:27626011-27626030 | Msa0636720:intron | 10.0% |
| !!! | TTATTAAAATTAAAAGTGTT+TGG | - | chr4_3:27626738-27626757 | None:intergenic | 10.0% |
| !!! | TTTAGTTTATTTAATGAAAA+CGG | + | chr4_3:27628852-27628871 | Msa0636720:intron | 10.0% |
| !! | AAAGAAGAAATAATAATTTC+CGG | - | chr4_3:27625711-27625730 | None:intergenic | 15.0% |
| !! | AATTAATAAAAGGTCAAAAT+TGG | - | chr4_3:27626129-27626148 | None:intergenic | 15.0% |
| !!! | CTTTGTTTTATAAAATTACT+GGG | - | chr4_3:27626335-27626354 | None:intergenic | 15.0% |
| !!! | TCTTTGTTTTATAAAATTAC+TGG | - | chr4_3:27626336-27626355 | None:intergenic | 15.0% |
| !!! | TTGTTTTTCTTTTTTTTGAA+GGG | - | chr4_3:27626390-27626409 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTCTTTTTTTTGA+AGG | - | chr4_3:27626391-27626410 | None:intergenic | 15.0% |
| !! | TAAATATAAAATGACGTAAA+AGG | - | chr4_3:27626690-27626709 | None:intergenic | 15.0% |
| !!! | TAAAAGTTTTGCTTAAAAAT+TGG | - | chr4_3:27627274-27627293 | None:intergenic | 15.0% |
| !! | CATTAAATAAACTAAAGTAA+TGG | - | chr4_3:27628848-27628867 | None:intergenic | 15.0% |
| !!! | TTTAATAGAATTTTGAATCA+AGG | + | chr4_3:27628957-27628976 | Msa0636720:intron | 15.0% |
| !!! | TTTTTTTCTCTTCGATAAAA+GGG | + | chr4_3:27625822-27625841 | Msa0636720:intron | 20.0% |
| !! | TATTAAGTTTGTATGTAGTT+TGG | - | chr4_3:27625859-27625878 | None:intergenic | 20.0% |
| !!! | TAGAAATCAACATATTTTTG+CGG | - | chr4_3:27628122-27628141 | None:intergenic | 20.0% |
| !! | TATAAGATCTATATGTGATA+TGG | - | chr4_3:27628378-27628397 | None:intergenic | 20.0% |
| !! | AAAGAATAAAATGCTTTCTT+TGG | - | chr4_3:27628440-27628459 | None:intergenic | 20.0% |
| !!! | TTATGCTTATCAAATTTTGT+TGG | + | chr4_3:27629023-27629042 | Msa0636720:intron | 20.0% |
| ! | AATGTAGAAACTATAGTTGT+AGG | + | chr4_3:27625189-27625208 | Msa0636720:five_prime_UTR | 25.0% |
| ! | AAACAACAATATTGAAGTTC+AGG | + | chr4_3:27625296-27625315 | Msa0636720:CDS | 25.0% |
| ! | AACAACAATATTGAAGTTCA+GGG | + | chr4_3:27625297-27625316 | Msa0636720:CDS | 25.0% |
| ! | TGAAATGAATAAGATGTTGA+AGG | + | chr4_3:27625470-27625489 | Msa0636720:CDS | 25.0% |
| ! | GATCAGAATTCTAATTACTA+TGG | - | chr4_3:27625745-27625764 | None:intergenic | 25.0% |
| !! | CTTTTATCGAAGAGAAAAAA+AGG | - | chr4_3:27625823-27625842 | None:intergenic | 25.0% |
| !!! | CTTTTTTTCTCTTCGATAAA+AGG | + | chr4_3:27625821-27625840 | Msa0636720:intron | 25.0% |
| !!! | ACATGTTTTAAAACTACTAC+TGG | - | chr4_3:27626276-27626295 | None:intergenic | 25.0% |
| ! | TTATGCACTTTCAATTCATA+CGG | - | chr4_3:27626895-27626914 | None:intergenic | 25.0% |
| ! | ATGCCTATAAATATGAGAAA+GGG | + | chr4_3:27626944-27626963 | Msa0636720:intron | 25.0% |
| ! | TTACCCTTTCTCATATTTAT+AGG | - | chr4_3:27626950-27626969 | None:intergenic | 25.0% |
| !! | AATAACAGAAACGTATTTTC+TGG | + | chr4_3:27627236-27627255 | Msa0636720:intron | 25.0% |
| ! | TCTTAAAATAGTCTGATACA+AGG | - | chr4_3:27627310-27627329 | None:intergenic | 25.0% |
| !!! | ACTATTTTAAGAGAGATAGA+AGG | + | chr4_3:27627318-27627337 | Msa0636720:intron | 25.0% |
| !!! | CTATTTTAAGAGAGATAGAA+GGG | + | chr4_3:27627319-27627338 | Msa0636720:intron | 25.0% |
| ! | TGTTAAATGTAATACACATG+GGG | - | chr4_3:27627958-27627977 | None:intergenic | 25.0% |
| ! | GTGTTAAATGTAATACACAT+GGG | - | chr4_3:27627959-27627978 | None:intergenic | 25.0% |
| ! | AGTGTTAAATGTAATACACA+TGG | - | chr4_3:27627960-27627979 | None:intergenic | 25.0% |
| !!! | AGAAATCAACATATTTTTGC+GGG | - | chr4_3:27628121-27628140 | None:intergenic | 25.0% |
| ! | GAAAATAATAACCTAGCATT+TGG | - | chr4_3:27628172-27628191 | None:intergenic | 25.0% |
| ! | TTGGAATAATGTTTGGAAAT+GGG | - | chr4_3:27628471-27628490 | None:intergenic | 25.0% |
| ! | ATCGTCTAATTACTATTGTT+AGG | + | chr4_3:27628514-27628533 | Msa0636720:intron | 25.0% |
| ! | CAATCTTCTCATTTATATGT+TGG | + | chr4_3:27628685-27628704 | Msa0636720:intron | 25.0% |
| ! | TGGCTTATTGAAAAAGTAAT+TGG | + | chr4_3:27628931-27628950 | Msa0636720:intron | 25.0% |
| ! | GATAAGCATAACATTTAATG+TGG | - | chr4_3:27629014-27629033 | None:intergenic | 25.0% |
| ! | ATATGTAGCCAAAAAATTCA+AGG | - | chr4_3:27629182-27629201 | None:intergenic | 25.0% |
| ! | TTGTAAAGTGTATATGAGTT+TGG | + | chr4_3:27629201-27629220 | Msa0636720:three_prime_UTR | 25.0% |
| ! | TTACGGTAATATTTATATGC+AGG | - | chr4_3:27629236-27629255 | None:intergenic | 25.0% |
| AAAAAGATGAGGTGAGTATA+TGG | + | chr4_3:27625682-27625701 | Msa0636720:intron | 30.0% | |
| AGTTTATACCACAAGAATGT+GGG | - | chr4_3:27626181-27626200 | None:intergenic | 30.0% | |
| !! | CGATGCATAGTTGATTTTTA+AGG | - | chr4_3:27626300-27626319 | None:intergenic | 30.0% |
| ATACGGGTACTTACTATTTA+GGG | - | chr4_3:27626878-27626897 | None:intergenic | 30.0% | |
| TATGCACTTTCAATTCATAC+GGG | - | chr4_3:27626894-27626913 | None:intergenic | 30.0% | |
| CATGCCTATAAATATGAGAA+AGG | + | chr4_3:27626943-27626962 | Msa0636720:intron | 30.0% | |
| CAGTATCTTTGGTTAATAAG+GGG | - | chr4_3:27627043-27627062 | None:intergenic | 30.0% | |
| GCAGTATCTTTGGTTAATAA+GGG | - | chr4_3:27627044-27627063 | None:intergenic | 30.0% | |
| TGCAGTATCTTTGGTTAATA+AGG | - | chr4_3:27627045-27627064 | None:intergenic | 30.0% | |
| GTGAGAGTTAACTTAAAATC+AGG | + | chr4_3:27627082-27627101 | Msa0636720:intron | 30.0% | |
| TTTGTATAGAGTTTGTCTCT+TGG | + | chr4_3:27627381-27627400 | Msa0636720:intron | 30.0% | |
| AAACAACAGCGAAAGAAAAA+AGG | - | chr4_3:27627638-27627657 | None:intergenic | 30.0% | |
| !! | TGTTCCATACACTTTGATTT+TGG | + | chr4_3:27627680-27627699 | Msa0636720:intron | 30.0% |
| ACAACCAAAATCAAAGTGTA+TGG | - | chr4_3:27627687-27627706 | None:intergenic | 30.0% | |
| TGTTATAGCTAGTAATCACA+AGG | - | chr4_3:27627934-27627953 | None:intergenic | 30.0% | |
| CATTTAACACTTCCTCTATA+CGG | + | chr4_3:27627969-27627988 | Msa0636720:intron | 30.0% | |
| !! | ATTCTATAATTCAGGTTGAG+TGG | - | chr4_3:27628001-27628020 | None:intergenic | 30.0% |
| AGGTCAGTATTCTATAATTC+AGG | - | chr4_3:27628009-27628028 | None:intergenic | 30.0% | |
| ! | TTTTTCTAATCAGCCTAATC+AGG | - | chr4_3:27628249-27628268 | None:intergenic | 30.0% |
| ! | ATCTTCGCTTCATATTTTGT+GGG | - | chr4_3:27628315-27628334 | None:intergenic | 30.0% |
| ! | AATCTTCGCTTCATATTTTG+TGG | - | chr4_3:27628316-27628335 | None:intergenic | 30.0% |
| AATAATGTTTGGAAATGGGA+GGG | - | chr4_3:27628467-27628486 | None:intergenic | 30.0% | |
| CTTGGAATAATGTTTGGAAA+TGG | - | chr4_3:27628472-27628491 | None:intergenic | 30.0% | |
| TTCCAAACATTATTCCAAGT+AGG | + | chr4_3:27628473-27628492 | Msa0636720:intron | 30.0% | |
| GTCTAATTACTATTGTTAGG+AGG | + | chr4_3:27628517-27628536 | Msa0636720:intron | 30.0% | |
| !!! | TTTTTTCATCCAAGTGAGAA+TGG | + | chr4_3:27628719-27628738 | Msa0636720:intron | 30.0% |
| ATGTATCTTCACTGTATGTT+TGG | + | chr4_3:27628795-27628814 | Msa0636720:intron | 30.0% | |
| GAGTGAAATTTGTATATCGA+TGG | + | chr4_3:27628911-27628930 | Msa0636720:intron | 30.0% | |
| !!! | ATTTGCGACCTTGAATTTTT+TGG | + | chr4_3:27629171-27629190 | Msa0636720:three_prime_UTR | 30.0% |
| GTATCACTATTACAATTTGC+AGG | + | chr4_3:27629283-27629302 | Msa0636720:three_prime_UTR | 30.0% | |
| AGAAACTATAGTTGTAGGCA+TGG | + | chr4_3:27625194-27625213 | Msa0636720:exon | 35.0% | |
| AACAATATTGAAGTTCAGGG+AGG | + | chr4_3:27625300-27625319 | Msa0636720:CDS | 35.0% | |
| ACAATATTGAAGTTCAGGGA+GGG | + | chr4_3:27625301-27625320 | Msa0636720:CDS | 35.0% | |
| GAAGAAGAAGAACAAGAAGA+AGG | - | chr4_3:27625336-27625355 | None:intergenic | 35.0% | |
| GGAAATTCCTTCTTCATGAT+GGG | - | chr4_3:27625367-27625386 | None:intergenic | 35.0% | |
| AGGAAATTCCTTCTTCATGA+TGG | - | chr4_3:27625368-27625387 | None:intergenic | 35.0% | |
| TGAATAAGATGTTGAAGGTG+CGG | + | chr4_3:27625475-27625494 | Msa0636720:CDS | 35.0% | |
| TATGAGAGTGGAAATTGTGA+GGG | + | chr4_3:27625506-27625525 | Msa0636720:CDS | 35.0% | |
| TCTTCTTAGGCAAAAAGATG+AGG | + | chr4_3:27625671-27625690 | Msa0636720:CDS | 35.0% | |
| TTGTATGTAGTTTGGCCTAA+CGG | - | chr4_3:27625851-27625870 | None:intergenic | 35.0% | |
| AAAATGTTAACACAATCCGC+TGG | + | chr4_3:27625914-27625933 | Msa0636720:intron | 35.0% | |
| ! | AAAGCTAGCTTATAGCTTGT+TGG | + | chr4_3:27625969-27625988 | Msa0636720:intron | 35.0% |
| CAAAAAACGCTATAAGCTAG+TGG | - | chr4_3:27626050-27626069 | None:intergenic | 35.0% | |
| AAAAAACACCCACATTCTTG+TGG | + | chr4_3:27626170-27626189 | Msa0636720:intron | 35.0% | |
| CAGTTTATACCACAAGAATG+TGG | - | chr4_3:27626182-27626201 | None:intergenic | 35.0% | |
| GATCAGTATAATAGCAACCT+CGG | + | chr4_3:27626250-27626269 | Msa0636720:intron | 35.0% | |
| AAAATTACTGGGCGCAATAT+TGG | - | chr4_3:27626324-27626343 | None:intergenic | 35.0% | |
| ! | TTACTATTTAGGGGTGTGTT+TGG | - | chr4_3:27626868-27626887 | None:intergenic | 35.0% |
| TACGGGTACTTACTATTTAG+GGG | - | chr4_3:27626877-27626896 | None:intergenic | 35.0% | |
| CATACGGGTACTTACTATTT+AGG | - | chr4_3:27626879-27626898 | None:intergenic | 35.0% | |
| TATTTATAGGCATGCAAACC+AGG | - | chr4_3:27626937-27626956 | None:intergenic | 35.0% | |
| CATGTCAATCCTTCATGATA+AGG | + | chr4_3:27626970-27626989 | Msa0636720:intron | 35.0% | |
| CATTAATCGCCTTATCATGA+AGG | - | chr4_3:27626982-27627001 | None:intergenic | 35.0% | |
| TCATGATAAGGCGATTAATG+AGG | + | chr4_3:27626982-27627001 | Msa0636720:intron | 35.0% | |
| CATGATAAGGCGATTAATGA+GGG | + | chr4_3:27626983-27627002 | Msa0636720:intron | 35.0% | |
| GAAAATCAAAGATGAGTCGA+GGG | + | chr4_3:27627014-27627033 | Msa0636720:intron | 35.0% | |
| TAACTCTCACAAATCTGACT+CGG | - | chr4_3:27627072-27627091 | None:intergenic | 35.0% | |
| AGAAAGGCAACAACAAAACT+AGG | + | chr4_3:27627357-27627376 | Msa0636720:intron | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | + | chr4_3:27627358-27627377 | Msa0636720:intron | 35.0% | |
| !! | GCAACAAAACTAGGTTTTGT+GGG | + | chr4_3:27627403-27627422 | Msa0636720:intron | 35.0% |
| AATCCTAATAGTGTTTCCCA+AGG | - | chr4_3:27627437-27627456 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | + | chr4_3:27627445-27627464 | Msa0636720:intron | 35.0% | |
| TAACGCTACTCATCATATAG+TGG | + | chr4_3:27627535-27627554 | Msa0636720:intron | 35.0% | |
| ! | CTACTCATCATATAGTGGAA+CGG | + | chr4_3:27627540-27627559 | Msa0636720:intron | 35.0% |
| !! | AAGAATTTGTTGACCCAGTT+CGG | - | chr4_3:27627602-27627621 | None:intergenic | 35.0% |
| !!! | TCGCTGTTGTTTTCTACTTT+TGG | + | chr4_3:27627646-27627665 | Msa0636720:intron | 35.0% |
| ! | TCCACACATCAAGTTGTTAT+TGG | + | chr4_3:27627722-27627741 | Msa0636720:intron | 35.0% |
| ACCAATAACAACTTGATGTG+TGG | - | chr4_3:27627726-27627745 | None:intergenic | 35.0% | |
| ! | ACATCAAGTTGTTATTGGTG+TGG | + | chr4_3:27627727-27627746 | Msa0636720:intron | 35.0% |
| CTTTCTCTTGAATCTTGTTG+AGG | - | chr4_3:27627767-27627786 | None:intergenic | 35.0% | |
| GTGTTCATGTCAAAACTTTG+GGG | - | chr4_3:27627836-27627855 | None:intergenic | 35.0% | |
| GGTGTTCATGTCAAAACTTT+GGG | - | chr4_3:27627837-27627856 | None:intergenic | 35.0% | |
| !!! | CCGAAATTTGGGCTATTTTT+CGG | - | chr4_3:27627858-27627877 | None:intergenic | 35.0% |
| CCGAAAAATAGCCCAAATTT+CGG | + | chr4_3:27627855-27627874 | Msa0636720:intron | 35.0% | |
| TTAGAGATGAATCAAGTGTG+TGG | - | chr4_3:27627895-27627914 | None:intergenic | 35.0% | |
| ! | TGTGGGAATTTTGCATACTT+TGG | + | chr4_3:27628035-27628054 | Msa0636720:intron | 35.0% |
| ! | GTGGGAATTTTGCATACTTT+GGG | + | chr4_3:27628036-27628055 | Msa0636720:intron | 35.0% |
| ATTCAGCCAGATATACCAAA+TGG | + | chr4_3:27628141-27628160 | Msa0636720:intron | 35.0% | |
| GCATAACCATTTGGTATATC+TGG | - | chr4_3:27628150-27628169 | None:intergenic | 35.0% | |
| TAGCATTTGGCATAACCATT+TGG | - | chr4_3:27628159-27628178 | None:intergenic | 35.0% | |
| AAATGGTTATGCCAAATGCT+AGG | + | chr4_3:27628158-27628177 | Msa0636720:intron | 35.0% | |
| GTGTGAAAATTCAAGCAATG+TGG | - | chr4_3:27628289-27628308 | None:intergenic | 35.0% | |
| ATAATGTTTGGAAATGGGAG+GGG | - | chr4_3:27628466-27628485 | None:intergenic | 35.0% | |
| GAATAATGTTTGGAAATGGG+AGG | - | chr4_3:27628468-27628487 | None:intergenic | 35.0% | |
| TGCCTACTTGGAATAATGTT+TGG | - | chr4_3:27628478-27628497 | None:intergenic | 35.0% | |
| ATACCATTGTTGAGTCATGA+GGG | + | chr4_3:27628568-27628587 | Msa0636720:intron | 35.0% | |
| TGTGAATATGTCATGCGAAA+AGG | + | chr4_3:27628988-27629007 | Msa0636720:intron | 35.0% | |
| GTGCAATATTAAGCAAGAGT+TGG | - | chr4_3:27629062-27629081 | None:intergenic | 35.0% | |
| ATTGCAGAGTCAACCAATAT+TGG | + | chr4_3:27629145-27629164 | Msa0636720:three_prime_UTR | 35.0% | |
| GGTCGCAAATTTACCAATAT+TGG | - | chr4_3:27629161-27629180 | None:intergenic | 35.0% | |
| AACTATAGTTGTAGGCATGG+AGG | + | chr4_3:27625197-27625216 | Msa0636720:exon | 40.0% | |
| GATTATTCTGTTCCATCCAG+AGG | - | chr4_3:27625268-27625287 | None:intergenic | 40.0% | |
| GAAGAAGAACAAGAAGAAGG+AGG | - | chr4_3:27625333-27625352 | None:intergenic | 40.0% | |
| !! | ATTCCTTCTTCATGATGGGT+AGG | - | chr4_3:27625363-27625382 | None:intergenic | 40.0% |
| CTATGAGAGTGGAAATTGTG+AGG | + | chr4_3:27625505-27625524 | Msa0636720:CDS | 40.0% | |
| TCGTAACTATGCAATGTGTG+CGG | + | chr4_3:27625542-27625561 | Msa0636720:CDS | 40.0% | |
| ! | ACGGTTCGGAATATCTTCTT+AGG | + | chr4_3:27625658-27625677 | Msa0636720:CDS | 40.0% |
| ATGAGGATGCATGACAACAT+GGG | - | chr4_3:27626215-27626234 | None:intergenic | 40.0% | |
| ATACTGATCCTCTTTGTCCA+GGG | - | chr4_3:27626239-27626258 | None:intergenic | 40.0% | |
| TATACTGATCCTCTTTGTCC+AGG | - | chr4_3:27626240-27626259 | None:intergenic | 40.0% | |
| ! | TTTAAAACTACTACTGGCCG+AGG | - | chr4_3:27626270-27626289 | None:intergenic | 40.0% |
| ! | CTGAAAAGCTAGCTTATAGC+TGG | - | chr4_3:27626798-27626817 | None:intergenic | 40.0% |
| CGAAAATCAAAGATGAGTCG+AGG | + | chr4_3:27627013-27627032 | Msa0636720:intron | 40.0% | |
| ACGAAATTCTTCAACCATCG+TGG | - | chr4_3:27627148-27627167 | None:intergenic | 40.0% | |
| GATGGTTGAAGAATTTCGTG+AGG | + | chr4_3:27627149-27627168 | Msa0636720:intron | 40.0% | |
| AGATAGAAGGGCTGAAACAA+GGG | + | chr4_3:27627331-27627350 | Msa0636720:intron | 40.0% | |
| GCTGAAACAAGGGTTTAGAA+AGG | + | chr4_3:27627341-27627360 | Msa0636720:intron | 40.0% | |
| TGTCTCTTGGCAACAAAACT+AGG | + | chr4_3:27627394-27627413 | Msa0636720:intron | 40.0% | |
| ! | GGCAACAAAACTAGGTTTTG+TGG | + | chr4_3:27627402-27627421 | Msa0636720:intron | 40.0% |
| !!! | TTTTGTGGGTTGATTCACCT+TGG | + | chr4_3:27627417-27627436 | Msa0636720:intron | 40.0% |
| !! | TTTGTGGGTTGATTCACCTT+GGG | + | chr4_3:27627418-27627437 | Msa0636720:intron | 40.0% |
| TCACCTTGGGAAACACTATT+AGG | + | chr4_3:27627431-27627450 | Msa0636720:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | + | chr4_3:27627451-27627470 | Msa0636720:intron | 40.0% | |
| TGAGTAGCGTTACAAAGAGA+TGG | - | chr4_3:27627527-27627546 | None:intergenic | 40.0% | |
| ! | TCATCATATAGTGGAACGGA+GGG | + | chr4_3:27627544-27627563 | Msa0636720:intron | 40.0% |
| CGGTGTTCATGTCAAAACTT+TGG | - | chr4_3:27627838-27627857 | None:intergenic | 40.0% | |
| GATGAATCAAGTGTGTGGTT+AGG | - | chr4_3:27627890-27627909 | None:intergenic | 40.0% | |
| AATACTGACCTTGCAAGTGT+GGG | + | chr4_3:27628018-27628037 | Msa0636720:intron | 40.0% | |
| TGAACATGTTGTATGTAGCG+AGG | - | chr4_3:27628086-27628105 | None:intergenic | 40.0% | |
| CTAATCAGGAGCTTAAGGAA+TGG | - | chr4_3:27628235-27628254 | None:intergenic | 40.0% | |
| CATTCCTTAAGCTCCTGATT+AGG | + | chr4_3:27628233-27628252 | Msa0636720:intron | 40.0% | |
| GGATTGAAGAGTGAAGACTA+AGG | - | chr4_3:27628402-27628421 | None:intergenic | 40.0% | |
| ! | CTTTGGCTGCTTTATAACGA+TGG | - | chr4_3:27628423-27628442 | None:intergenic | 40.0% |
| CACATTGATGTATGCCTACT+TGG | - | chr4_3:27628490-27628509 | None:intergenic | 40.0% | |
| GATACCATTGTTGAGTCATG+AGG | + | chr4_3:27628567-27628586 | Msa0636720:intron | 40.0% | |
| TACCATTGTTGAGTCATGAG+GGG | + | chr4_3:27628569-27628588 | Msa0636720:intron | 40.0% | |
| TGGTCCAAGTTTGATCGATT+CGG | - | chr4_3:27628828-27628847 | None:intergenic | 40.0% | |
| GCATGGAGGAAATAAACGAG+TGG | + | chr4_3:27625211-27625230 | Msa0636720:exon | 45.0% | |
| !! | TTCTTCATGATGGGTAGGAG+TGG | - | chr4_3:27625358-27625377 | None:intergenic | 45.0% |
| ACTCCTACCCATCATGAAGA+AGG | + | chr4_3:27625357-27625376 | Msa0636720:CDS | 45.0% | |
| ! | TAAGATGTTGAAGGTGCGGA+TGG | + | chr4_3:27625479-27625498 | Msa0636720:CDS | 45.0% |
| AATTGTGAGGGTGGCTTCTA+AGG | + | chr4_3:27625518-27625537 | Msa0636720:CDS | 45.0% | |
| CGTAACTATGCAATGTGTGC+GGG | + | chr4_3:27625543-27625562 | Msa0636720:CDS | 45.0% | |
| GTAACTATGCAATGTGTGCG+GGG | + | chr4_3:27625544-27625563 | Msa0636720:CDS | 45.0% | |
| TAACTATGCAATGTGTGCGG+GGG | + | chr4_3:27625545-27625564 | Msa0636720:CDS | 45.0% | |
| !! | GTTTTGGTCAATTACGTGCG+TGG | + | chr4_3:27625569-27625588 | Msa0636720:CDS | 45.0% |
| TGGTTTACGTCGGGATTCAA+AGG | + | chr4_3:27625619-27625638 | Msa0636720:CDS | 45.0% | |
| TGAGGTGAGTATATGGCATC+CGG | + | chr4_3:27625689-27625708 | Msa0636720:intron | 45.0% | |
| ! | AGATGTCCTAAGTATCGTCG+CGG | + | chr4_3:27625771-27625790 | Msa0636720:intron | 45.0% |
| ATGTTAACACAATCCGCTGG+TGG | + | chr4_3:27625917-27625936 | Msa0636720:intron | 45.0% | |
| TGGATGATCTAGGCTGTGTT+TGG | + | chr4_3:27625937-27625956 | Msa0636720:intron | 45.0% | |
| CATGACAACATGGGTAAACG+TGG | - | chr4_3:27626206-27626225 | None:intergenic | 45.0% | |
| CATGAGGATGCATGACAACA+TGG | - | chr4_3:27626216-27626235 | None:intergenic | 45.0% | |
| CTCGGCTATTGCAGTATCTT+TGG | - | chr4_3:27627054-27627073 | None:intergenic | 45.0% | |
| AATTTCGTGAGGCAAGTCAC+TGG | + | chr4_3:27627160-27627179 | Msa0636720:intron | 45.0% | |
| ! | TGGATTTTTCGTGCCACGAT+GGG | + | chr4_3:27627180-27627199 | Msa0636720:intron | 45.0% |
| GAGATAGAAGGGCTGAAACA+AGG | + | chr4_3:27627330-27627349 | Msa0636720:intron | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | + | chr4_3:27627452-27627471 | Msa0636720:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | + | chr4_3:27627480-27627499 | Msa0636720:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | + | chr4_3:27627483-27627502 | Msa0636720:intron | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | + | chr4_3:27627484-27627503 | Msa0636720:intron | 45.0% | |
| ! | CTCATCATATAGTGGAACGG+AGG | + | chr4_3:27627543-27627562 | Msa0636720:intron | 45.0% |
| TCCAAATTGACCTAGTCTGG+GGG | - | chr4_3:27627579-27627598 | None:intergenic | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | - | chr4_3:27627580-27627599 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | - | chr4_3:27627581-27627600 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | + | chr4_3:27627585-27627604 | Msa0636720:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | + | chr4_3:27627586-27627605 | Msa0636720:intron | 45.0% | |
| CAACTTGATGTGTGGAGCAA+GGG | - | chr4_3:27627718-27627737 | None:intergenic | 45.0% | |
| ACAACTTGATGTGTGGAGCA+AGG | - | chr4_3:27627719-27627738 | None:intergenic | 45.0% | |
| CTTGAACTTGCATGGGACAA+AGG | - | chr4_3:27627800-27627819 | None:intergenic | 45.0% | |
| CTCTGCTCTTGAACTTGCAT+GGG | - | chr4_3:27627807-27627826 | None:intergenic | 45.0% | |
| ACTCTGCTCTTGAACTTGCA+TGG | - | chr4_3:27627808-27627827 | None:intergenic | 45.0% | |
| GAATCAAGTGTGTGGTTAGG+TGG | - | chr4_3:27627887-27627906 | None:intergenic | 45.0% | |
| CTAGTAATCACAAGGCTGCA+TGG | - | chr4_3:27627926-27627945 | None:intergenic | 45.0% | |
| !! | GAGTGGAAAGTACCGTATAG+AGG | - | chr4_3:27627984-27628003 | None:intergenic | 45.0% |
| GAATACTGACCTTGCAAGTG+TGG | + | chr4_3:27628017-27628036 | Msa0636720:intron | 45.0% | |
| GCAAAATTCCCACACTTGCA+AGG | - | chr4_3:27628029-27628048 | None:intergenic | 45.0% | |
| !! | TAGCGAGGCAGTCTTATTGA+TGG | - | chr4_3:27628071-27628090 | None:intergenic | 45.0% |
| TCAGGAGCTTAAGGAATGGT+TGG | - | chr4_3:27628231-27628250 | None:intergenic | 45.0% | |
| TCAGCCTAATCAGGAGCTTA+AGG | - | chr4_3:27628240-27628259 | None:intergenic | 45.0% | |
| TCGACATGAGAAGAACGCAA+AGG | + | chr4_3:27628335-27628354 | Msa0636720:intron | 45.0% | |
| CATGAGAAGAACGCAAAGGT+CGG | + | chr4_3:27628339-27628358 | Msa0636720:intron | 45.0% | |
| TTCACACGTGACTACGTGAA+GGG | - | chr4_3:27628752-27628771 | None:intergenic | 45.0% | |
| AACCTTGCGACGTGATGATA+AGG | - | chr4_3:27629097-27629116 | None:intergenic | 45.0% | |
| GTTCAGGTGCATCGAATTAG+CGG | + | chr4_3:27629114-27629133 | Msa0636720:CDS | 45.0% | |
| !!! | ATTTATTTAGATTTTAATTA+CGG | - | chr4_3:27629253-27629272 | None:intergenic | 5.0% |
| AGGAATTTCCTCGCCCATGA+CGG | + | chr4_3:27625377-27625396 | Msa0636720:CDS | 50.0% | |
| GAGAGTGGAAATTGTGAGGG+TGG | + | chr4_3:27625509-27625528 | Msa0636720:CDS | 50.0% | |
| TCGATAAAAGGGACGCCGTT+AGG | + | chr4_3:27625833-27625852 | Msa0636720:intron | 50.0% | |
| ! | AATCCGCTGGTGGATGATCT+AGG | + | chr4_3:27625927-27625946 | Msa0636720:intron | 50.0% |
| ! | CTGGATTTTTCGTGCCACGA+TGG | + | chr4_3:27627179-27627198 | Msa0636720:intron | 50.0% |
| ! | GGATTTTTCGTGCCACGATG+GGG | + | chr4_3:27627181-27627200 | Msa0636720:intron | 50.0% |
| AGTCTCTTGGTTACGGGAAG+AGG | + | chr4_3:27627458-27627477 | Msa0636720:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | + | chr4_3:27627575-27627594 | Msa0636720:intron | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | - | chr4_3:27627582-27627601 | None:intergenic | 50.0% | |
| !! | GGTGGCTTTGGCCGAAATTT+GGG | - | chr4_3:27627869-27627888 | None:intergenic | 50.0% |
| !! | AGGTGGCTTTGGCCGAAATT+TGG | - | chr4_3:27627870-27627889 | None:intergenic | 50.0% |
| AGTGTGTGGTTAGGTGGCTT+TGG | - | chr4_3:27627881-27627900 | None:intergenic | 50.0% | |
| !! | CGAGGCAGTCTTATTGATGG+AGG | - | chr4_3:27628068-27628087 | None:intergenic | 50.0% |
| AGAATCTCTAGACCTGCGAG+TGG | - | chr4_3:27628205-27628224 | None:intergenic | 50.0% | |
| CTCCCCTCATGACTCAACAA+TGG | - | chr4_3:27628574-27628593 | None:intergenic | 50.0% | |
| !! | GTCCAACCTGATGGATTCAC+CGG | - | chr4_3:27628598-27628617 | None:intergenic | 50.0% |
| TTGCTCTTGGTCCAACCTGA+TGG | - | chr4_3:27628607-27628626 | None:intergenic | 50.0% | |
| CTCACTTGAGTGCTTGCTCT+TGG | - | chr4_3:27628620-27628639 | None:intergenic | 50.0% | |
| TCACACGTGACTACGTGAAG+GGG | - | chr4_3:27628751-27628770 | None:intergenic | 50.0% | |
| CTTCACACGTGACTACGTGA+AGG | - | chr4_3:27628753-27628772 | None:intergenic | 50.0% | |
| TGCGCCGAATCGATCAAACT+TGG | + | chr4_3:27628821-27628840 | Msa0636720:intron | 50.0% | |
| ! | AGCCTTATCATCACGTCGCA+AGG | + | chr4_3:27629092-27629111 | Msa0636720:CDS | 50.0% |
| ATCATCACGTCGCAAGGTTC+AGG | + | chr4_3:27629098-27629117 | Msa0636720:CDS | 50.0% | |
| CACACCACTCTCGAATCCTC+TGG | + | chr4_3:27625249-27625268 | Msa0636720:CDS | 55.0% | |
| CCATCCAGAGGATTCGAGAG+TGG | - | chr4_3:27625256-27625275 | None:intergenic | 55.0% | |
| CCACTCTCGAATCCTCTGGA+TGG | + | chr4_3:27625253-27625272 | Msa0636720:CDS | 55.0% | |
| ACGGAACTTGACGCCGTCAT+GGG | - | chr4_3:27625393-27625412 | None:intergenic | 55.0% | |
| AACGGAACTTGACGCCGTCA+TGG | - | chr4_3:27625394-27625413 | None:intergenic | 55.0% | |
| ATGACGGCGTCAAGTTCCGT+TGG | + | chr4_3:27625393-27625412 | Msa0636720:CDS | 55.0% | |
| TTCACCTTCCTCGCCACCAA+CGG | - | chr4_3:27625412-27625431 | None:intergenic | 55.0% | |
| ! | GATGTTGAAGGTGCGGATGG+AGG | + | chr4_3:27625482-27625501 | Msa0636720:CDS | 55.0% |
| TGGTCAATTACGTGCGTGGC+TGG | + | chr4_3:27625573-27625592 | Msa0636720:CDS | 55.0% | |
| !! | ACGGCGGTGTTGGTTTACGT+CGG | + | chr4_3:27625609-27625628 | Msa0636720:CDS | 55.0% |
| ATTCCGAACCGTCCACCTTC+CGG | - | chr4_3:27625650-27625669 | None:intergenic | 55.0% | |
| ! | CTAAGTATCGTCGCGGCGTA+GGG | + | chr4_3:27625778-27625797 | Msa0636720:intron | 55.0% |
| ! | TAAGTATCGTCGCGGCGTAG+GGG | + | chr4_3:27625779-27625798 | Msa0636720:intron | 55.0% |
| CAGCCTAGATCATCCACCAG+CGG | - | chr4_3:27625933-27625952 | None:intergenic | 55.0% | |
| TGTCATGCATCCTCATGCCC+TGG | + | chr4_3:27626219-27626238 | Msa0636720:intron | 55.0% | |
| TCCTCATGCCCTGGACAAAG+AGG | + | chr4_3:27626228-27626247 | Msa0636720:intron | 55.0% | |
| TCCTCTTTGTCCAGGGCATG+AGG | - | chr4_3:27626232-27626251 | None:intergenic | 55.0% | |
| !! | CAGGTAGCTGACTGACTTGC+GGG | - | chr4_3:27626918-27626937 | None:intergenic | 55.0% |
| !! | CCAGGTAGCTGACTGACTTG+CGG | - | chr4_3:27626919-27626938 | None:intergenic | 55.0% |
| TCTTGGTTACGGGAAGAGGC+TGG | + | chr4_3:27627462-27627481 | Msa0636720:intron | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | + | chr4_3:27627463-27627482 | Msa0636720:intron | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | + | chr4_3:27627469-27627488 | Msa0636720:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | + | chr4_3:27627470-27627489 | Msa0636720:intron | 55.0% | |
| GTTGAGTCATGAGGGGAGTC+CGG | + | chr4_3:27628576-27628595 | Msa0636720:intron | 55.0% | |
| GTCCGGTGAATCCATCAGGT+TGG | + | chr4_3:27628593-27628612 | Msa0636720:intron | 55.0% | |
| !! | GGGGACTAGCCATTCTCACT+TGG | - | chr4_3:27628731-27628750 | None:intergenic | 55.0% |
| CACACGTGACTACGTGAAGG+GGG | - | chr4_3:27628750-27628769 | None:intergenic | 55.0% | |
| ACGGCGTCAAGTTCCGTTGG+TGG | + | chr4_3:27625396-27625415 | Msa0636720:CDS | 60.0% | |
| !! | GTCAAGTTCCGTTGGTGGCG+AGG | + | chr4_3:27625401-27625420 | Msa0636720:CDS | 60.0% |
| !! | AGTTCCGTTGGTGGCGAGGA+AGG | + | chr4_3:27625405-27625424 | Msa0636720:CDS | 60.0% |
| GGCTGCAACGCGGTTGGATT+GGG | + | chr4_3:27625443-27625462 | Msa0636720:CDS | 60.0% | |
| GCGGATGGAGGCTATGAGAG+TGG | + | chr4_3:27625494-27625513 | Msa0636720:CDS | 60.0% | |
| !!! | CAATGTGTGCGGGGGCGTTT+TGG | + | chr4_3:27625553-27625572 | Msa0636720:CDS | 60.0% |
| GGCTGGAGCTGTAGCTGTGA+CGG | + | chr4_3:27625590-27625609 | Msa0636720:CDS | 60.0% | |
| TGGAGCTGTAGCTGTGACGG+CGG | + | chr4_3:27625593-27625612 | Msa0636720:CDS | 60.0% | |
| TGTAGCTGTGACGGCGGTGT+TGG | + | chr4_3:27625599-27625618 | Msa0636720:CDS | 60.0% | |
| !! | CGGCGGTGTTGGTTTACGTC+GGG | + | chr4_3:27625610-27625629 | Msa0636720:CDS | 60.0% |
| !! | TCGGGATTCAAAGGCGTCGC+CGG | + | chr4_3:27625628-27625647 | Msa0636720:CDS | 60.0% |
| !! | GATTCAAAGGCGTCGCCGGA+AGG | + | chr4_3:27625632-27625651 | Msa0636720:CDS | 60.0% |
| CCTACGCCGCGACGATACTT+AGG | - | chr4_3:27625780-27625799 | None:intergenic | 60.0% | |
| ! | CCTAAGTATCGTCGCGGCGT+AGG | + | chr4_3:27625777-27625796 | Msa0636720:intron | 60.0% |
| CCGCAAGTCAGTCAGCTACC+TGG | + | chr4_3:27626916-27626935 | Msa0636720:intron | 60.0% | |
| GCAGAAGCAACGTGCCACGA+TGG | + | chr4_3:27627110-27627129 | Msa0636720:intron | 60.0% | |
| GGCACGTTGCTTCTCCATCG+TGG | - | chr4_3:27627127-27627146 | None:intergenic | 60.0% | |
| GGAGAAGCAACGTGCCACGA+TGG | + | chr4_3:27627131-27627150 | Msa0636720:intron | 60.0% | |
| AACGTGGCACGATGGTGTGC+TGG | + | chr4_3:27627208-27627227 | Msa0636720:intron | 60.0% | |
| TCAGTACCTGCTCCACTCGC+AGG | + | chr4_3:27628190-27628209 | Msa0636720:intron | 60.0% | |
| TCTAGACCTGCGAGTGGAGC+AGG | - | chr4_3:27628199-27628218 | None:intergenic | 60.0% | |
| GGGAGTCCGGTGAATCCATC+AGG | + | chr4_3:27628589-27628608 | Msa0636720:intron | 60.0% | |
| ACTTGACGCCGTCATGGGCG+AGG | - | chr4_3:27625388-27625407 | None:intergenic | 65.0% | |
| AGGAAGGTGAAGCCCCGACG+CGG | + | chr4_3:27625421-27625440 | Msa0636720:CDS | 65.0% | |
| GGGCTGCAACGCGGTTGGAT+TGG | + | chr4_3:27625442-27625461 | Msa0636720:CDS | 65.0% | |
| !! | TCAAAGGCGTCGCCGGAAGG+TGG | + | chr4_3:27625635-27625654 | Msa0636720:CDS | 65.0% |
| TCGCCGGAAGGTGGACGGTT+CGG | + | chr4_3:27625644-27625663 | Msa0636720:CDS | 65.0% | |
| GCCACGATGGGGTCTCAACG+TGG | + | chr4_3:27627192-27627211 | Msa0636720:intron | 65.0% | |
| GCCACGTTGAGACCCCATCG+TGG | - | chr4_3:27627196-27627215 | None:intergenic | 65.0% | |
| GGGGTCTCAACGTGGCACGA+TGG | + | chr4_3:27627200-27627219 | Msa0636720:intron | 65.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | + | chr4_3:27627566-27627585 | Msa0636720:intron | 65.0% | |
| GGAAGGTGAAGCCCCGACGC+GGG | + | chr4_3:27625422-27625441 | Msa0636720:CDS | 70.0% | |
| AACCGCGTTGCAGCCCGCGT+CGG | - | chr4_3:27625438-27625457 | None:intergenic | 70.0% | |
| ! | AGGCGTCGCCGGAAGGTGGA+CGG | + | chr4_3:27625639-27625658 | Msa0636720:CDS | 70.0% |
| TCGTCGCGGCGTAGGGGCTT+TGG | + | chr4_3:27625785-27625804 | Msa0636720:intron | 70.0% | |
| CGTCGCGGCGTAGGGGCTTT+GGG | + | chr4_3:27625786-27625805 | Msa0636720:intron | 70.0% | |
| ACCGCGTTGCAGCCCGCGTC+GGG | - | chr4_3:27625437-27625456 | None:intergenic | 75.0% | |
| ! | GACGCGGGCTGCAACGCGGT+TGG | + | chr4_3:27625437-27625456 | Msa0636720:CDS | 75.0% |
| ! | CCGCGTTGCAGCCCGCGTCG+GGG | - | chr4_3:27625436-27625455 | None:intergenic | 80.0% |
| !! | CCCCGACGCGGGCTGCAACG+CGG | + | chr4_3:27625433-27625452 | Msa0636720:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 27625187 | 27629313 | 27625187 | ID=Msa0636720;Name=Msa0636720 |
| chr4_3 | mRNA | 27625187 | 27629313 | 27625187 | ID=Msa0636720-mRNA-1;Parent=Msa0636720;Name=Msa0636720-mRNA-1;_AED=0.00;_eAED=0.00;_QI=26|1|1|1|1|1|2|173|189 |
| chr4_3 | exon | 27625187 | 27625692 | 27625187 | ID=Msa0636720-mRNA-1:exon:6818;Parent=Msa0636720-mRNA-1 |
| chr4_3 | exon | 27629051 | 27629313 | 27629051 | ID=Msa0636720-mRNA-1:exon:6819;Parent=Msa0636720-mRNA-1 |
| chr4_3 | five_prime_UTR | 27625187 | 27625212 | 27625187 | ID=Msa0636720-mRNA-1:five_prime_utr;Parent=Msa0636720-mRNA-1 |
| chr4_3 | CDS | 27625213 | 27625692 | 27625213 | ID=Msa0636720-mRNA-1:cds;Parent=Msa0636720-mRNA-1 |
| chr4_3 | CDS | 27629051 | 27629140 | 27629051 | ID=Msa0636720-mRNA-1:cds;Parent=Msa0636720-mRNA-1 |
| chr4_3 | three_prime_UTR | 27629141 | 27629313 | 27629141 | ID=Msa0636720-mRNA-1:three_prime_utr;Parent=Msa0636720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
