Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229640 | XP_003626834.1 | 98.232 | 622 | 11 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229640 | sp|F4HVY0|CER1_ARATH | 61.699 | 624 | 234 | 2 | 1 | 619 | 1 | 624 | 0.0 | 810 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229640 | G7LDH6 | 98.232 | 622 | 11 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1275 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1229640 | 0.825120 | 5.573101e-54 | -8.615850e-47 |
| Msa0008850 | Msa1229640 | 0.803300 | 3.722837e-49 | -8.615850e-47 |
| Msa0017120 | Msa1229640 | 0.824139 | 9.490111e-54 | -8.615850e-47 |
| Msa0043680 | Msa1229640 | 0.828707 | 7.742667e-55 | -8.615850e-47 |
| Msa0057260 | Msa1229640 | 0.817233 | 3.666534e-52 | -8.615850e-47 |
| Msa0065390 | Msa1229640 | 0.834005 | 3.848778e-56 | -8.615850e-47 |
| Msa0072820 | Msa1229640 | 0.816296 | 5.948880e-52 | -8.615850e-47 |
| Msa0084630 | Msa1229640 | 0.804174 | 2.451557e-49 | -8.615850e-47 |
| Msa0084680 | Msa1229640 | 0.801432 | 9.029468e-49 | -8.615850e-47 |
| Msa0092660 | Msa1229640 | 0.816359 | 5.758299e-52 | -8.615850e-47 |
| Msa0092680 | Msa1229640 | 0.812111 | 4.997694e-51 | -8.615850e-47 |
| Msa0092730 | Msa1229640 | 0.814263 | 1.684545e-51 | -8.615850e-47 |
| Msa0110710 | Msa1229640 | 0.839074 | 1.969375e-57 | -8.615850e-47 |
| Msa0607280 | Msa1229640 | 0.832995 | 6.876365e-56 | -8.615850e-47 |
| Msa0609790 | Msa1229640 | 0.838281 | 3.156242e-57 | -8.615850e-47 |
| Msa0614230 | Msa1229640 | 0.826492 | 2.634019e-54 | -8.615850e-47 |
| Msa0617120 | Msa1229640 | 0.839994 | 1.135738e-57 | -8.615850e-47 |
| Msa0633860 | Msa1229640 | 0.849480 | 3.147506e-60 | -8.615850e-47 |
| Msa0634420 | Msa1229640 | 0.837929 | 3.888800e-57 | -8.615850e-47 |
| Msa0636720 | Msa1229640 | 0.828490 | 8.732420e-55 | -8.615850e-47 |
| Msa0638710 | Msa1229640 | 0.845896 | 3.050970e-59 | -8.615850e-47 |
| Msa0640880 | Msa1229640 | 0.830952 | 2.198004e-55 | -8.615850e-47 |
| Msa0647460 | Msa1229640 | 0.801036 | 1.088312e-48 | -8.615850e-47 |
| Msa0649310 | Msa1229640 | 0.806993 | 6.281099e-50 | -8.615850e-47 |
| Msa0660820 | Msa1229640 | 0.827092 | 1.893820e-54 | -8.615850e-47 |
| Msa0667970 | Msa1229640 | 0.810586 | 1.070775e-50 | -8.615850e-47 |
| Msa0676100 | Msa1229640 | 0.800350 | 1.501727e-48 | -8.615850e-47 |
| Msa0681890 | Msa1229640 | 0.814753 | 1.311953e-51 | -8.615850e-47 |
| Msa0690720 | Msa1229640 | 0.803098 | 4.098958e-49 | -8.615850e-47 |
| Msa0720270 | Msa1229640 | 0.816148 | 6.419538e-52 | -8.615850e-47 |
| Msa0738870 | Msa1229640 | 0.830949 | 2.201308e-55 | -8.615850e-47 |
| Msa0738880 | Msa1229640 | 0.835392 | 1.723138e-56 | -8.615850e-47 |
| Msa0740350 | Msa1229640 | -0.811693 | 6.161208e-51 | -8.615850e-47 |
| Msa0781490 | Msa1229640 | -0.808134 | 3.596064e-50 | -8.615850e-47 |
| Msa0783280 | Msa1229640 | 0.819238 | 1.289802e-52 | -8.615850e-47 |
| Msa0794130 | Msa1229640 | 0.810856 | 9.361228e-51 | -8.615850e-47 |
| Msa0803130 | Msa1229640 | 0.839355 | 1.665171e-57 | -8.615850e-47 |
| Msa0806720 | Msa1229640 | 0.809211 | 2.116593e-50 | -8.615850e-47 |
| Msa0806760 | Msa1229640 | 0.807457 | 5.008337e-50 | -8.615850e-47 |
| Msa0819320 | Msa1229640 | 0.832784 | 7.758158e-56 | -8.615850e-47 |
| Msa0819330 | Msa1229640 | 0.807256 | 5.525198e-50 | -8.615850e-47 |
| Msa0819360 | Msa1229640 | 0.813130 | 2.990783e-51 | -8.615850e-47 |
| Msa0819370 | Msa1229640 | 0.836250 | 1.044723e-56 | -8.615850e-47 |
| Msa0838660 | Msa1229640 | 0.806480 | 8.057917e-50 | -8.615850e-47 |
| Msa0841490 | Msa1229640 | 0.834057 | 3.733979e-56 | -8.615850e-47 |
| Msa0122210 | Msa1229640 | 0.804259 | 2.354084e-49 | -8.615850e-47 |
| Msa0130800 | Msa1229640 | 0.802983 | 4.329092e-49 | -8.615850e-47 |
| Msa0135980 | Msa1229640 | 0.800035 | 1.740427e-48 | -8.615850e-47 |
| Msa0137600 | Msa1229640 | 0.810019 | 1.419374e-50 | -8.615850e-47 |
| Msa0140290 | Msa1229640 | 0.812457 | 4.200177e-51 | -8.615850e-47 |
| Msa0146470 | Msa1229640 | 0.816548 | 5.226362e-52 | -8.615850e-47 |
| Msa0150210 | Msa1229640 | 0.826810 | 2.211639e-54 | -8.615850e-47 |
| Msa0155610 | Msa1229640 | 0.807001 | 6.255863e-50 | -8.615850e-47 |
| Msa0157020 | Msa1229640 | 0.815508 | 8.919393e-52 | -8.615850e-47 |
| Msa0171920 | Msa1229640 | 0.811248 | 7.699863e-51 | -8.615850e-47 |
| Msa0178940 | Msa1229640 | 0.807243 | 5.558083e-50 | -8.615850e-47 |
| Msa0185390 | Msa1229640 | 0.817878 | 2.624572e-52 | -8.615850e-47 |
| Msa0222070 | Msa1229640 | 0.810755 | 9.844715e-51 | -8.615850e-47 |
| Msa0222120 | Msa1229640 | 0.810888 | 9.215280e-51 | -8.615850e-47 |
| Msa0223280 | Msa1229640 | 0.817508 | 3.180588e-52 | -8.615850e-47 |
| Msa0227490 | Msa1229640 | 0.803999 | 2.665570e-49 | -8.615850e-47 |
| Msa0230400 | Msa1229640 | 0.807551 | 4.784018e-50 | -8.615850e-47 |
| Msa1229640 | Msa1238730 | 0.804052 | 2.599267e-49 | -8.615850e-47 |
| Msa1229640 | Msa1258810 | 0.812757 | 3.610188e-51 | -8.615850e-47 |
| Msa1229640 | Msa1263590 | 0.866202 | 3.388645e-65 | -8.615850e-47 |
| Msa1229640 | Msa1263670 | 0.867508 | 1.300039e-65 | -8.615850e-47 |
| Msa1229640 | Msa1272340 | 0.974144 | 1.215153e-137 | -8.615850e-47 |
| Msa1229640 | Msa1281270 | 0.817453 | 3.272457e-52 | -8.615850e-47 |
| Msa1229640 | Msa1284030 | 0.815596 | 8.524681e-52 | -8.615850e-47 |
| Msa1229640 | Msa1310250 | 0.970612 | 6.974243e-132 | -8.615850e-47 |
| Msa1229640 | Msa1317030 | 0.810482 | 1.127669e-50 | -8.615850e-47 |
| Msa1229640 | Msa1320380 | 0.823775 | 1.155314e-53 | -8.615850e-47 |
| Msa1229640 | Msa1323060 | 0.800982 | 1.116095e-48 | -8.615850e-47 |
| Msa1229640 | Msa1330240 | 0.813582 | 2.379049e-51 | -8.615850e-47 |
| Msa1229640 | Msa1347030 | 0.849399 | 3.314674e-60 | -8.615850e-47 |
| Msa1229640 | Msa1349360 | 0.814422 | 1.553590e-51 | -8.615850e-47 |
| Msa1229640 | Msa1349810 | 0.819283 | 1.259704e-52 | -8.615850e-47 |
| Msa1229640 | Msa1354040 | 0.807069 | 6.051483e-50 | -8.615850e-47 |
| Msa1229640 | Msa1378470 | 0.828446 | 8.949984e-55 | -8.615850e-47 |
| Msa1229640 | Msa1381130 | 0.818862 | 1.570864e-52 | -8.615850e-47 |
| Msa1229640 | Msa1394370 | -0.804901 | 1.729414e-49 | -8.615850e-47 |
| Msa1229640 | Msa1405770 | 0.837186 | 6.030256e-57 | -8.615850e-47 |
| Msa1229640 | Msa1423190 | 0.805580 | 1.246408e-49 | -8.615850e-47 |
| Msa1229640 | Msa1431730 | 0.816314 | 5.895563e-52 | -8.615850e-47 |
| Msa1229640 | Msa1434020 | 0.817215 | 3.702017e-52 | -8.615850e-47 |
| Msa1229640 | Msa1466350 | 0.810210 | 1.290594e-50 | -8.615850e-47 |
| Msa0380060 | Msa1229640 | 0.831374 | 1.731054e-55 | -8.615850e-47 |
| Msa0380650 | Msa1229640 | 0.809913 | 1.495905e-50 | -8.615850e-47 |
| Msa0382500 | Msa1229640 | 0.803272 | 3.772863e-49 | -8.615850e-47 |
| Msa0392050 | Msa1229640 | 0.808958 | 2.398002e-50 | -8.615850e-47 |
| Msa0401340 | Msa1229640 | 0.827477 | 1.530736e-54 | -8.615850e-47 |
| Msa0413180 | Msa1229640 | 0.800539 | 1.374551e-48 | -8.615850e-47 |
| Msa0417630 | Msa1229640 | 0.806690 | 7.276281e-50 | -8.615850e-47 |
| Msa0421800 | Msa1229640 | 0.809199 | 2.128809e-50 | -8.615850e-47 |
| Msa0429270 | Msa1229640 | 0.835979 | 1.223753e-56 | -8.615850e-47 |
| Msa0430290 | Msa1229640 | 0.809622 | 1.727752e-50 | -8.615850e-47 |
| Msa0441670 | Msa1229640 | 0.815267 | 1.009288e-51 | -8.615850e-47 |
| Msa0448120 | Msa1229640 | 0.822899 | 1.849967e-53 | -8.615850e-47 |
| Msa0467800 | Msa1229640 | 0.818406 | 1.992814e-52 | -8.615850e-47 |
| Msa0467880 | Msa1229640 | 0.814049 | 1.877677e-51 | -8.615850e-47 |
| Msa0468020 | Msa1229640 | 0.803415 | 3.524681e-49 | -8.615850e-47 |
| Msa0469950 | Msa1229640 | 0.809078 | 2.259872e-50 | -8.615850e-47 |
| Msa0472270 | Msa1229640 | 0.805735 | 1.156173e-49 | -8.615850e-47 |
| Msa0481490 | Msa1229640 | 0.823681 | 1.215168e-53 | -8.615850e-47 |
| Msa0987350 | Msa1229640 | 0.807771 | 4.295525e-50 | -8.615850e-47 |
| Msa1001780 | Msa1229640 | 0.801840 | 7.448390e-49 | -8.615850e-47 |
| Msa1002040 | Msa1229640 | 0.805110 | 1.563572e-49 | -8.615850e-47 |
| Msa1004500 | Msa1229640 | 0.828763 | 7.503451e-55 | -8.615850e-47 |
| Msa1004520 | Msa1229640 | 0.811053 | 8.484519e-51 | -8.615850e-47 |
| Msa1022310 | Msa1229640 | 0.813962 | 1.962670e-51 | -8.615850e-47 |
| Msa1027790 | Msa1229640 | 0.818040 | 2.411715e-52 | -8.615850e-47 |
| Msa1030870 | Msa1229640 | 0.853355 | 2.524418e-61 | -8.615850e-47 |
| Msa1046870 | Msa1229640 | 0.813147 | 2.964813e-51 | -8.615850e-47 |
| Msa1069960 | Msa1229640 | 0.803883 | 2.818140e-49 | -8.615850e-47 |
| Msa0253160 | Msa1229640 | 0.802432 | 5.625078e-49 | -8.615850e-47 |
| Msa0259980 | Msa1229640 | 0.810602 | 1.062343e-50 | -8.615850e-47 |
| Msa0263620 | Msa1229640 | 0.810209 | 1.291433e-50 | -8.615850e-47 |
| Msa0265580 | Msa1229640 | 0.820533 | 6.523104e-53 | -8.615850e-47 |
| Msa0274780 | Msa1229640 | 0.811791 | 5.867296e-51 | -8.615850e-47 |
| Msa0291940 | Msa1229640 | 0.805007 | 1.643434e-49 | -8.615850e-47 |
| Msa0296000 | Msa1229640 | 0.843201 | 1.620656e-58 | -8.615850e-47 |
| Msa0297920 | Msa1229640 | 0.807554 | 4.775739e-50 | -8.615850e-47 |
| Msa0303440 | Msa1229640 | 0.817207 | 3.717008e-52 | -8.615850e-47 |
| Msa0303500 | Msa1229640 | 0.806547 | 7.800883e-50 | -8.615850e-47 |
| Msa0311910 | Msa1229640 | 0.803170 | 3.961870e-49 | -8.615850e-47 |
| Msa0320540 | Msa1229640 | 0.804388 | 2.212371e-49 | -8.615850e-47 |
| Msa0333900 | Msa1229640 | 0.827141 | 1.842938e-54 | -8.615850e-47 |
| Msa0334020 | Msa1229640 | 0.834221 | 3.396733e-56 | -8.615850e-47 |
| Msa0344680 | Msa1229640 | 0.809401 | 1.926953e-50 | -8.615850e-47 |
| Msa0354390 | Msa1229640 | 0.825799 | 3.848547e-54 | -8.615850e-47 |
| Msa1112610 | Msa1229640 | 0.810999 | 8.718200e-51 | -8.615850e-47 |
| Msa1115580 | Msa1229640 | 0.803668 | 3.123829e-49 | -8.615850e-47 |
| Msa1134400 | Msa1229640 | 0.825987 | 3.473293e-54 | -8.615850e-47 |
| Msa1144730 | Msa1229640 | 0.810629 | 1.048005e-50 | -8.615850e-47 |
| Msa1157680 | Msa1229640 | 0.813400 | 2.609299e-51 | -8.615850e-47 |
| Msa1165810 | Msa1229640 | 0.814066 | 1.861556e-51 | -8.615850e-47 |
| Msa1177240 | Msa1229640 | 0.824386 | 8.301155e-54 | -8.615850e-47 |
| Msa1181510 | Msa1229640 | 0.809184 | 2.145420e-50 | -8.615850e-47 |
| Msa1219250 | Msa1229640 | 0.816210 | 6.219487e-52 | -8.615850e-47 |
| Msa1220450 | Msa1229640 | -0.806529 | 7.868899e-50 | -8.615850e-47 |
| Msa1220460 | Msa1229640 | -0.800466 | 1.422680e-48 | -8.615850e-47 |
| Msa1220740 | Msa1229640 | 0.813091 | 3.050631e-51 | -8.615850e-47 |
| Msa0485280 | Msa1229640 | 0.811935 | 5.459554e-51 | -8.615850e-47 |
| Msa0514260 | Msa1229640 | 0.801266 | 9.765393e-49 | -8.615850e-47 |
| Msa0519200 | Msa1229640 | 0.827171 | 1.812431e-54 | -8.615850e-47 |
| Msa0525270 | Msa1229640 | 0.806873 | 6.657203e-50 | -8.615850e-47 |
| Msa0525280 | Msa1229640 | 0.808073 | 3.704295e-50 | -8.615850e-47 |
| Msa0537870 | Msa1229640 | 0.881618 | 2.066416e-70 | -8.615850e-47 |
| Msa0537880 | Msa1229640 | 0.847992 | 8.140469e-60 | -8.615850e-47 |
| Msa0538260 | Msa1229640 | 0.863937 | 1.742092e-64 | -8.615850e-47 |
| Msa0538270 | Msa1229640 | 0.821959 | 3.059246e-53 | -8.615850e-47 |
| Msa0538570 | Msa1229640 | 0.825800 | 3.846164e-54 | -8.615850e-47 |
| Msa0546740 | Msa1229640 | 0.800939 | 1.138739e-48 | -8.615850e-47 |
| Msa0549760 | Msa1229640 | 0.814081 | 1.847749e-51 | -8.615850e-47 |
| Msa0561510 | Msa1229640 | 0.803407 | 3.538590e-49 | -8.615850e-47 |
| Msa0583740 | Msa1229640 | 0.815332 | 9.758689e-52 | -8.615850e-47 |
| Msa0594390 | Msa1229640 | 0.805030 | 1.625258e-49 | -8.615850e-47 |
| Msa0600390 | Msa1229640 | 0.817294 | 3.552658e-52 | -8.615850e-47 |
| Msa0859510 | Msa1229640 | 0.803795 | 2.939392e-49 | -8.615850e-47 |
| Msa0859520 | Msa1229640 | 0.821106 | 4.815852e-53 | -8.615850e-47 |
| Msa0875360 | Msa1229640 | 0.804203 | 2.418329e-49 | -8.615850e-47 |
| Msa0887280 | Msa1229640 | 0.815785 | 7.739176e-52 | -8.615850e-47 |
| Msa0910010 | Msa1229640 | 0.813119 | 3.007304e-51 | -8.615850e-47 |
| Msa0931480 | Msa1229640 | 0.827059 | 1.927630e-54 | -8.615850e-47 |
| Msa0945960 | Msa1229640 | 0.801643 | 8.175361e-49 | -8.615850e-47 |
| Msa0950900 | Msa1229640 | 0.830194 | 3.368872e-55 | -8.615850e-47 |
| Msa0958020 | Msa1229640 | 0.805750 | 1.147996e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229640 | MtrunA17_Chr8g0337081 | 98.232 | 622 | 11 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1275 |
| Msa1229640 | MtrunA17_Chr8g0337101 | 64.401 | 618 | 219 | 1 | 1 | 617 | 37 | 654 | 0.0 | 845 |
| Msa1229640 | MtrunA17_Chr7g0256371 | 66.071 | 616 | 203 | 2 | 1 | 616 | 10 | 619 | 0.0 | 840 |
| Msa1229640 | MtrunA17_Chr7g0256391 | 64.935 | 616 | 212 | 2 | 1 | 616 | 1 | 612 | 0.0 | 827 |
| Msa1229640 | MtrunA17_Chr7g0256411 | 64.668 | 617 | 213 | 2 | 1 | 617 | 32 | 643 | 0.0 | 822 |
| Msa1229640 | MtrunA17_Chr4g0026761 | 65.273 | 622 | 212 | 2 | 1 | 622 | 1 | 618 | 0.0 | 817 |
| Msa1229640 | MtrunA17_Chr4g0026811 | 64.693 | 456 | 158 | 1 | 20 | 475 | 6 | 458 | 0.0 | 582 |
| Msa1229640 | MtrunA17_Chr4g0073231 | 34.194 | 620 | 396 | 6 | 8 | 615 | 5 | 624 | 3.30e-128 | 391 |
| Msa1229640 | MtrunA17_Chr2g0305431 | 31.541 | 279 | 186 | 2 | 8 | 283 | 5 | 281 | 1.74e-54 | 187 |
| Msa1229640 | MtrunA17_Chr2g0305451 | 34.259 | 216 | 135 | 3 | 407 | 615 | 2 | 217 | 8.39e-37 | 137 |
| Msa1229640 | MtrunA17_Chr4g0026821 | 55.435 | 92 | 40 | 1 | 474 | 565 | 3 | 93 | 8.26e-27 | 104 |
| Msa1229640 | MtrunA17_Chr4g0026831 | 71.111 | 45 | 13 | 0 | 573 | 617 | 1 | 45 | 1.88e-18 | 79.3 |
| Msa1229640 | MtrunA17_Chr2g0305441 | 30.952 | 126 | 87 | 0 | 282 | 407 | 33 | 158 | 3.76e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229640 | AT1G02205.2 | 61.699 | 624 | 234 | 2 | 1 | 619 | 1 | 624 | 0.0 | 810 |
| Msa1229640 | AT1G02205.3 | 61.049 | 629 | 235 | 2 | 1 | 619 | 1 | 629 | 0.0 | 807 |
| Msa1229640 | AT1G02205.4 | 60.992 | 605 | 231 | 2 | 20 | 619 | 21 | 625 | 0.0 | 772 |
| Msa1229640 | AT1G02190.1 | 57.440 | 625 | 253 | 6 | 1 | 615 | 1 | 622 | 0.0 | 724 |
| Msa1229640 | AT1G02190.2 | 57.440 | 625 | 249 | 7 | 1 | 615 | 1 | 618 | 0.0 | 719 |
| Msa1229640 | AT2G37700.3 | 57.189 | 619 | 257 | 3 | 1 | 615 | 1 | 615 | 0.0 | 713 |
| Msa1229640 | AT2G37700.1 | 57.027 | 619 | 249 | 4 | 1 | 615 | 1 | 606 | 0.0 | 707 |
| Msa1229640 | AT2G37700.4 | 53.150 | 619 | 245 | 4 | 1 | 615 | 1 | 578 | 0.0 | 641 |
| Msa1229640 | AT1G02205.1 | 59.161 | 453 | 180 | 2 | 172 | 619 | 8 | 460 | 0.0 | 574 |
| Msa1229640 | AT2G37700.2 | 59.034 | 476 | 190 | 2 | 1 | 475 | 1 | 472 | 0.0 | 560 |
| Msa1229640 | AT1G02205.5 | 56.349 | 378 | 160 | 2 | 247 | 619 | 8 | 385 | 3.04e-161 | 467 |
| Msa1229640 | AT5G57800.1 | 33.871 | 620 | 395 | 6 | 8 | 612 | 5 | 624 | 7.39e-120 | 370 |
Find 134 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGATTTCATGAATAATT+TGG | 0.071224 | 8_2:-5487904 | Msa1229640:CDS |
| ATATATAGCTATTGTGAAAT+TGG | 0.161382 | 8_2:-5482931 | Msa1229640:three_prime_UTR |
| CCAATTTATGATTACATCTA+TGG | 0.221817 | 8_2:-5485557 | Msa1229640:CDS |
| TCCCAATCTTAGTTGATATA+TGG | 0.227104 | 8_2:+5485433 | None:intergenic |
| TCATGTGGCCATTCACCTTT+TGG | 0.234069 | 8_2:-5485361 | Msa1229640:CDS |
| CTCGAAGTCCCAGAAGAATT+TGG | 0.242161 | 8_2:-5483993 | Msa1229640:CDS |
| AGCATCCTCACCATCATATA+TGG | 0.248897 | 8_2:+5489751 | None:intergenic |
| CTTAGTTGATATATGGATTC+AGG | 0.250871 | 8_2:+5485440 | None:intergenic |
| CTGGGAAAACCAAATTCTTC+TGG | 0.252091 | 8_2:+5483984 | None:intergenic |
| TTTGGAGGGAATTGGGAAAA+TGG | 0.256646 | 8_2:+5483732 | None:intergenic |
| TCTTCTCTTATACCCTTTCT+TGG | 0.257970 | 8_2:-5490201 | Msa1229640:five_prime_UTR |
| TGTTTAGCATTGACAAAATA+TGG | 0.263713 | 8_2:-5483106 | Msa1229640:CDS |
| GAGTGGACATTGGATAAATT+AGG | 0.267216 | 8_2:+5483657 | None:intergenic |
| GAAATTTCTTTGGAGGGAAT+TGG | 0.270137 | 8_2:+5483724 | None:intergenic |
| ACAGAGGAAATGTCTTAAAT+TGG | 0.276513 | 8_2:+5482902 | None:intergenic |
| GGATGCTACATGACCAAATT+TGG | 0.279073 | 8_2:-5489735 | Msa1229640:CDS |
| AAGATGGAGAAGACTTTCTT+AGG | 0.303702 | 8_2:+5487858 | None:intergenic |
| ATAATTTATCAACATGCTTC+AGG | 0.307718 | 8_2:-5482974 | Msa1229640:three_prime_UTR |
| GTAATTGCTGTTGTGTATAA+TGG | 0.316269 | 8_2:+5487969 | None:intergenic |
| AGGATAAACTCACAAGTTAT+TGG | 0.325113 | 8_2:+5488960 | None:intergenic |
| AACAATCTTCATCTTAAGTT+GGG | 0.326096 | 8_2:+5484340 | None:intergenic |
| CCATAGATGTAATCATAAAT+TGG | 0.332696 | 8_2:+5485557 | None:intergenic |
| AGTGGACATTGGATAAATTA+GGG | 0.340224 | 8_2:+5483658 | None:intergenic |
| ATTGATTTCATGAATAATTT+GGG | 0.340630 | 8_2:-5487903 | Msa1229640:CDS |
| ATCATGAGAATCTTCAATTA+AGG | 0.341373 | 8_2:-5484021 | Msa1229640:CDS |
| CATGCACTCATGACTCTTCT+TGG | 0.342220 | 8_2:+5483191 | None:intergenic |
| GGTACAAACAATGATCCTTT+TGG | 0.353128 | 8_2:+5483753 | None:intergenic |
| GAGAATGATATCTAGAATAA+AGG | 0.354501 | 8_2:+5489009 | None:intergenic |
| ATCCATATATCAACTAAGAT+TGG | 0.361402 | 8_2:-5485435 | Msa1229640:CDS |
| ACCTTTGCAGAATTTGATCC+TGG | 0.365054 | 8_2:+5483965 | None:intergenic |
| ATATGCTCAATTTGCAATCA+TGG | 0.374703 | 8_2:-5485280 | Msa1229640:CDS |
| ATGGTGAACTATACATTAAA+AGG | 0.375204 | 8_2:-5484367 | Msa1229640:CDS |
| GAGATAAAGAGATCCAAATT+TGG | 0.381279 | 8_2:+5489722 | None:intergenic |
| CACTACATCATACACAATTT+CGG | 0.388068 | 8_2:-5485601 | Msa1229640:CDS |
| CAGTGGAGTTTCTTTACTAT+TGG | 0.392734 | 8_2:-5489058 | Msa1229640:CDS |
| ATGAACGTCCCAATCTTCTA+AGG | 0.394013 | 8_2:+5483145 | None:intergenic |
| ATCAGTAAGTATGCCAGGTT+TGG | 0.394606 | 8_2:+5490164 | None:intergenic |
| CTTAAGATGAAGATTGTTGA+TGG | 0.396304 | 8_2:-5484335 | Msa1229640:CDS |
| AGCAGAGTTGAGCAAAGTTA+AGG | 0.398577 | 8_2:-5485090 | Msa1229640:CDS |
| TTCCTCTGTACTAGCATTTG+TGG | 0.400135 | 8_2:-5482888 | Msa1229640:three_prime_UTR |
| CAACAATCTTCATCTTAAGT+TGG | 0.401690 | 8_2:+5484339 | None:intergenic |
| TATTGCACGCCTTAGAAGAT+TGG | 0.402684 | 8_2:-5483154 | Msa1229640:CDS |
| AAATTTCTTTGGAGGGAATT+GGG | 0.405095 | 8_2:+5483725 | None:intergenic |
| GCATCCATAGCATCATTTGC+TGG | 0.414049 | 8_2:-5487939 | Msa1229640:CDS |
| TGGGAAAACCAAATTCTTCT+GGG | 0.421201 | 8_2:+5483985 | None:intergenic |
| ATGAGTGCATGGCGTATTGC+TGG | 0.430094 | 8_2:-5483179 | Msa1229640:CDS |
| ATACTTAAGGATTGGAAAGA+TGG | 0.436601 | 8_2:+5487842 | None:intergenic |
| TTTGGTCTGTTCTTGTCACT+TGG | 0.441280 | 8_2:-5485343 | Msa1229640:CDS |
| AGTTAATGCTTTGTGTGAAA+GGG | 0.442145 | 8_2:-5484216 | Msa1229640:CDS |
| TGTGAATAGTCCAGAGGAAA+AGG | 0.447569 | 8_2:-5489797 | Msa1229640:CDS |
| CACACCACTAGTTCTCCATA+TGG | 0.447709 | 8_2:+5489109 | None:intergenic |
| GTGTATACATGGTATACTTA+AGG | 0.448902 | 8_2:+5487829 | None:intergenic |
| CAAATTCTTCTGGGACTTCG+AGG | 0.450017 | 8_2:+5483994 | None:intergenic |
| TCCATATATCAACTAAGATT+GGG | 0.460592 | 8_2:-5485434 | Msa1229640:CDS |
| GGAGACTTGCTCAATAGATA+TGG | 0.468212 | 8_2:-5484386 | Msa1229640:CDS |
| GACACCTCTCGGGAGATTCA+AGG | 0.470620 | 8_2:-5490133 | Msa1229640:intron |
| ATGACAATTCTTCTACATAG+TGG | 0.472384 | 8_2:-5489083 | Msa1229640:CDS |
| TAGTTAATGCTTTGTGTGAA+AGG | 0.473872 | 8_2:-5484217 | Msa1229640:CDS |
| GATAGACTATAATTCAATCA+AGG | 0.474782 | 8_2:+5483036 | None:intergenic |
| AGATTGAGGTGAGGAGGCTA+AGG | 0.474871 | 8_2:+5485403 | None:intergenic |
| ATTGCACGCCTTAGAAGATT+GGG | 0.477116 | 8_2:-5483153 | Msa1229640:CDS |
| CTTACTTGAACATGGAACCT+TGG | 0.484638 | 8_2:+5485251 | None:intergenic |
| TGTGTCAAATGCACCACATC+TGG | 0.484985 | 8_2:+5485473 | None:intergenic |
| TAGGCTATGTGTTCTGCAAA+TGG | 0.488094 | 8_2:+5488011 | None:intergenic |
| TATGCTCAATTTGCAATCAT+GGG | 0.489138 | 8_2:-5485279 | Msa1229640:CDS |
| GGGTATAAGAGAAGAGTCAA+AGG | 0.493599 | 8_2:+5490209 | None:intergenic |
| AATTTGCAGATATGGCTAGT+TGG | 0.497195 | 8_2:-5483810 | Msa1229640:intron |
| AACCTGGCATACTTACTGAT+TGG | 0.500706 | 8_2:-5490161 | Msa1229640:CDS |
| AGTTATTGGTTCTGTAACAA+TGG | 0.501203 | 8_2:+5488974 | None:intergenic |
| TGATGGCAGTAGCTTGGTTG+TGG | 0.501613 | 8_2:-5484318 | Msa1229640:CDS |
| GCATCCTCACCATCATATAT+GGG | 0.502244 | 8_2:+5489752 | None:intergenic |
| TGCAATCATGGGTTATTCCA+AGG | 0.508500 | 8_2:-5485268 | Msa1229640:CDS |
| GGCCAATCAGTAAGTATGCC+AGG | 0.509063 | 8_2:+5490159 | None:intergenic |
| AGGGGATGATTAATCTTCAA+TGG | 0.509840 | 8_2:+5483056 | None:intergenic |
| ATTGGCCATGGACACCTCTC+GGG | 0.512414 | 8_2:-5490143 | Msa1229640:CDS |
| TACATGGTATACTTAAGGAT+TGG | 0.514880 | 8_2:+5487834 | None:intergenic |
| CCCAGGATCAAATTCTGCAA+AGG | 0.521549 | 8_2:-5483966 | Msa1229640:intron |
| CCTCATCTTCCCATATATGA+TGG | 0.523645 | 8_2:-5489761 | Msa1229640:CDS |
| GATTGGCCATGGACACCTCT+CGG | 0.524511 | 8_2:-5490144 | Msa1229640:CDS |
| TCTCGCCATCGAACCGCCAA+AGG | 0.525130 | 8_2:-5489703 | Msa1229640:CDS |
| TTTGTGTGAAAGGGGTACTA+AGG | 0.525661 | 8_2:-5484207 | Msa1229640:intron |
| TGTGTGCTCTTTGCTATGAA+TGG | 0.527943 | 8_2:+5489829 | None:intergenic |
| CCTCAAAACTTACTTGAACA+TGG | 0.529432 | 8_2:+5485243 | None:intergenic |
| CCTTTGCAGAATTTGATCCT+GGG | 0.531383 | 8_2:+5483966 | None:intergenic |
| GATTGGGACGTTCATGAATG+TGG | 0.534938 | 8_2:-5483137 | Msa1229640:CDS |
| ATATGGATTCAGGAGTAGTA+AGG | 0.537682 | 8_2:+5485450 | None:intergenic |
| AAGTTGATCGAGAAAGCAAT+TGG | 0.540340 | 8_2:-5489642 | Msa1229640:intron |
| AGTGACAAGAACAGACCAAA+AGG | 0.542812 | 8_2:+5485346 | None:intergenic |
| TGGAATGCTGTTAAGAACAA+TGG | 0.543327 | 8_2:+5484295 | None:intergenic |
| ATAACCAGCAAATGATGCTA+TGG | 0.543759 | 8_2:+5487935 | None:intergenic |
| TGAATGGCCACATGAAATAG+AGG | 0.548660 | 8_2:+5485369 | None:intergenic |
| ATAGACTATAATTCAATCAA+GGG | 0.550122 | 8_2:+5483037 | None:intergenic |
| CCTCACCTCAATCTTCTGAA+TGG | 0.552731 | 8_2:-5485394 | Msa1229640:CDS |
| GGCAAGCAAGTCTTCAGCAT+GGG | 0.559393 | 8_2:-5483085 | Msa1229640:CDS |
| AAGTTTAGGTCTTTCAAACC+AGG | 0.561043 | 8_2:-5485063 | Msa1229640:intron |
| GATTGTTGATGGCAGTAGCT+TGG | 0.561867 | 8_2:-5484324 | Msa1229640:CDS |
| AGAAGAAGGTGCACCAGATG+TGG | 0.564679 | 8_2:-5485486 | Msa1229640:CDS |
| TACTTACGATGGTGTATACA+TGG | 0.565128 | 8_2:+5487818 | None:intergenic |
| AATTCATTGAAGAAAGAAGA+AGG | 0.567139 | 8_2:-5485500 | Msa1229640:CDS |
| AGAACAGACCAAAAGGTGAA+TGG | 0.569915 | 8_2:+5485353 | None:intergenic |
| TCTTTGTGGTAGACTTGACA+AGG | 0.570755 | 8_2:-5484252 | Msa1229640:CDS |
| TGCTGTTGTGTATAATGGAA+TGG | 0.580525 | 8_2:+5487974 | None:intergenic |
| ACACCACTAGTTCTCCATAT+GGG | 0.582237 | 8_2:+5489110 | None:intergenic |
| CCATCATATATGGGAAGATG+AGG | 0.585846 | 8_2:+5489761 | None:intergenic |
| CAAGAAGAGTCATGAGTGCA+TGG | 0.587562 | 8_2:-5483190 | Msa1229640:CDS |
| ACAATCTTCATCTTAAGTTG+GGG | 0.589510 | 8_2:+5484341 | None:intergenic |
| ATCTACTAACCTCACAAGAG+TGG | 0.589871 | 8_2:+5483640 | None:intergenic |
| AATCTCCCGAGAGGTGTCCA+TGG | 0.590370 | 8_2:+5490138 | None:intergenic |
| GTTAATGCTTTGTGTGAAAG+GGG | 0.590468 | 8_2:-5484215 | Msa1229640:CDS |
| GCATACTTACTGATTGGCCA+TGG | 0.592164 | 8_2:-5490155 | Msa1229640:CDS |
| ATCCAATGTCCACTCTTGTG+AGG | 0.593116 | 8_2:-5483649 | Msa1229640:intron |
| TTCAGAAGATTGAGGTGAGG+AGG | 0.601115 | 8_2:+5485397 | None:intergenic |
| AGGTACCATTCAGAAGATTG+AGG | 0.601316 | 8_2:+5485389 | None:intergenic |
| TGCTTCAGGTATTATCAGCA+AGG | 0.607213 | 8_2:-5482960 | Msa1229640:three_prime_UTR |
| CGCCACAAATGCTAGTACAG+AGG | 0.611522 | 8_2:+5482886 | None:intergenic |
| TCTTCTACATAGTGGACCAG+TGG | 0.617911 | 8_2:-5489075 | Msa1229640:CDS |
| GTGGACATTGGATAAATTAG+GGG | 0.619031 | 8_2:+5483659 | None:intergenic |
| TCTTCCCATATATGATGGTG+AGG | 0.622744 | 8_2:-5489756 | Msa1229640:CDS |
| ATATTATAAATAGATAGACT+TGG | 0.628761 | 8_2:-5490253 | Msa1229640:five_prime_UTR |
| AACCTCACAAGAGTGGACAT+TGG | 0.630620 | 8_2:+5483647 | None:intergenic |
| CAATAGTAAAGAAACTCCAC+TGG | 0.634669 | 8_2:+5489059 | None:intergenic |
| TTACCCATATGGAGAACTAG+TGG | 0.639339 | 8_2:-5489113 | Msa1229640:CDS |
| TGGCAAGCAAGTCTTCAGCA+TGG | 0.640804 | 8_2:-5483086 | Msa1229640:CDS |
| AATGGTACCTCTATTTCATG+TGG | 0.646040 | 8_2:-5485376 | Msa1229640:CDS |
| TAGACTATAATTCAATCAAG+GGG | 0.662906 | 8_2:+5483038 | None:intergenic |
| TGGACATTGGATAAATTAGG+GGG | 0.663725 | 8_2:+5483660 | None:intergenic |
| TTTCATTGTGAATAGTCCAG+AGG | 0.668809 | 8_2:-5489803 | Msa1229640:CDS |
| GGAAGATGAGGAAGTTACTG+AGG | 0.681674 | 8_2:+5489773 | None:intergenic |
| CATATGGAGAACTAGTGGTG+TGG | 0.687095 | 8_2:-5489108 | Msa1229640:CDS |
| AGTTGGAGATCAATGTGAGG+AGG | 0.689214 | 8_2:-5483793 | Msa1229640:CDS |
| ATTGTGTATGATGTAGTGAG+TGG | 0.695326 | 8_2:+5485606 | None:intergenic |
| CCATTCAGAAGATTGAGGTG+AGG | 0.698317 | 8_2:+5485394 | None:intergenic |
| GCTAGTTGGAGATCAATGTG+AGG | 0.727664 | 8_2:-5483796 | Msa1229640:CDS |
| GAAACCTTGAATCTCCCGAG+AGG | 0.749240 | 8_2:+5490129 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATAATTTTTATTTTTA+AGG | - | chr8_2:5487859-5487878 | Msa1229640:CDS | 0.0% |
| !! | GATCAAAAAATATTAAATTA+AGG | - | chr8_2:5483825-5483844 | Msa1229640:intron | 10.0% |
| !! | TAAAATAAAAAACAAAACAT+AGG | + | chr8_2:5484134-5484153 | None:intergenic | 10.0% |
| !!! | TGATAGTTTTTTTTTTTTAA+GGG | + | chr8_2:5484728-5484747 | None:intergenic | 10.0% |
| !!! | TTGATAGTTTTTTTTTTTTA+AGG | + | chr8_2:5484729-5484748 | None:intergenic | 10.0% |
| !! | TTTAACTAATATAAGTTAAA+AGG | - | chr8_2:5485513-5485532 | Msa1229640:CDS | 10.0% |
| !! | ATATTATAAATAGATAGACT+TGG | - | chr8_2:5482818-5482837 | Msa1229640:three_prime_UTR | 15.0% |
| !! | TAATTGTTTGTTTGAAAAAA+TGG | - | chr8_2:5483190-5483209 | Msa1229640:CDS | 15.0% |
| !!! | AAGTTGGAAATTTTATAATA+GGG | + | chr8_2:5483756-5483775 | None:intergenic | 15.0% |
| !!! | TAAGTTGGAAATTTTATAAT+AGG | + | chr8_2:5483757-5483776 | None:intergenic | 15.0% |
| !! | ATTTATATATGTCTTTAAGT+TGG | + | chr8_2:5483772-5483791 | None:intergenic | 15.0% |
| !! | AAGACATATATAAATATACA+TGG | - | chr8_2:5483777-5483796 | Msa1229640:CDS | 15.0% |
| !!! | AATGCATTGATATTTTATAT+TGG | - | chr8_2:5483907-5483926 | Msa1229640:intron | 15.0% |
| !!! | ATCTTTATTTCCATATTATT+GGG | + | chr8_2:5484174-5484193 | None:intergenic | 15.0% |
| !!! | TTAATTTTGTTCATTCAATT+TGG | + | chr8_2:5484473-5484492 | None:intergenic | 15.0% |
| !! | ACATATTAATTAACAATCTA+GGG | + | chr8_2:5484958-5484977 | None:intergenic | 15.0% |
| !! | CTAATATCTTCAATTTAATT+TGG | - | chr8_2:5485019-5485038 | Msa1229640:intron | 15.0% |
| !!! | ATTGATTTCATGAATAATTT+GGG | - | chr8_2:5485168-5485187 | Msa1229640:intron | 15.0% |
| !! | TTGTATATTCAATATCTTAA+TGG | - | chr8_2:5485312-5485331 | Msa1229640:CDS | 15.0% |
| !!! | TTAATTTCATTCCTTTTAAA+TGG | - | chr8_2:5485336-5485355 | Msa1229640:CDS | 15.0% |
| !!! | TAATTTCATTCCTTTTAAAT+GGG | - | chr8_2:5485337-5485356 | Msa1229640:CDS | 15.0% |
| !!! | TTAATAGAGTTTTTTTTATG+TGG | - | chr8_2:5485606-5485625 | Msa1229640:CDS | 15.0% |
| !!! | TAGTAATTTTGAATTAATAG+CGG | - | chr8_2:5485635-5485654 | Msa1229640:intron | 15.0% |
| !! | TTTAGTCTAAGTATTTAATA+TGG | - | chr8_2:5486033-5486052 | Msa1229640:intron | 15.0% |
| !! | TTTAATTAACCTCTAATAAA+AGG | - | chr8_2:5486525-5486544 | Msa1229640:intron | 15.0% |
| !! | TTAATTAACCTCTAATAAAA+GGG | - | chr8_2:5486526-5486545 | Msa1229640:intron | 15.0% |
| !!! | TTGATAGTAACTATTTATAT+TGG | - | chr8_2:5486592-5486611 | Msa1229640:intron | 15.0% |
| !! | TGATAGTAACTATTTATATT+GGG | - | chr8_2:5486593-5486612 | Msa1229640:intron | 15.0% |
| !!! | ATATAATTTCGTTTTTGAAA+TGG | - | chr8_2:5487153-5487172 | Msa1229640:intron | 15.0% |
| !! | AATCATAAGAAGAAAAAAAA+GGG | + | chr8_2:5487386-5487405 | None:intergenic | 15.0% |
| !! | AAATCATAAGAAGAAAAAAA+AGG | + | chr8_2:5487387-5487406 | None:intergenic | 15.0% |
| !!! | TTTTGTAGTATCTTTTTAAA+TGG | - | chr8_2:5487914-5487933 | Msa1229640:CDS | 15.0% |
| !! | ATCAAACATTATAAAATTAG+AGG | + | chr8_2:5488039-5488058 | None:intergenic | 15.0% |
| !!! | TTATAATGTTTGATTTTACA+CGG | - | chr8_2:5488045-5488064 | Msa1229640:intron | 15.0% |
| !!! | TAGGTCTTTTTTTTTTTTTA+TGG | + | chr8_2:5488226-5488245 | None:intergenic | 15.0% |
| !!! | GTCAATACATATAATTTTTT+TGG | - | chr8_2:5488290-5488309 | Msa1229640:intron | 15.0% |
| !!! | TTTTTGGCTAAATTATATTT+TGG | - | chr8_2:5488306-5488325 | Msa1229640:intron | 15.0% |
| !!! | TTTGGTTCTTTAAATTATTT+TGG | - | chr8_2:5488415-5488434 | Msa1229640:intron | 15.0% |
| !!! | AAATTATTTTGGTTTCATTT+TGG | - | chr8_2:5488426-5488445 | Msa1229640:intron | 15.0% |
| !! | TAAATGAAAAAAAAGCTTAA+AGG | - | chr8_2:5488596-5488615 | Msa1229640:intron | 15.0% |
| !! | CTACTAAATTATTTAAGAAT+TGG | - | chr8_2:5489507-5489526 | Msa1229640:intron | 15.0% |
| !! | TGTGATGATAGATTAATAAT+TGG | + | chr8_2:5483005-5483024 | None:intergenic | 20.0% |
| !! | CATAGAAATTAAATAATGCA+TGG | + | chr8_2:5483060-5483079 | None:intergenic | 20.0% |
| !!! | ATATTTTTTTTTGTGTGTGT+AGG | - | chr8_2:5483866-5483885 | Msa1229640:intron | 20.0% |
| !!! | TATTTTTTTTTGTGTGTGTA+GGG | - | chr8_2:5483867-5483886 | Msa1229640:intron | 20.0% |
| !!! | TGATATTTTATATTGGTCAA+TGG | - | chr8_2:5483914-5483933 | Msa1229640:intron | 20.0% |
| !!! | CATCTTTATTTCCATATTAT+TGG | + | chr8_2:5484175-5484194 | None:intergenic | 20.0% |
| !! | TATAGTTTAAAAAATCAGCA+TGG | - | chr8_2:5484257-5484276 | Msa1229640:CDS | 20.0% |
| !!! | ATTTTAAATTTTGTTGGTAG+TGG | + | chr8_2:5484283-5484302 | None:intergenic | 20.0% |
| !!! | GTGTGAATTTTAAATTTTGT+TGG | + | chr8_2:5484289-5484308 | None:intergenic | 20.0% |
| !! | AAAAGAAAATTTAATTGTGG+TGG | + | chr8_2:5484319-5484338 | None:intergenic | 20.0% |
| !! | GAGAAAAGAAAATTTAATTG+TGG | + | chr8_2:5484322-5484341 | None:intergenic | 20.0% |
| !! | TGAATGAACAAAATTAAAGA+TGG | - | chr8_2:5484476-5484495 | Msa1229640:intron | 20.0% |
| !! | GAATGAACAAAATTAAAGAT+GGG | - | chr8_2:5484477-5484496 | Msa1229640:intron | 20.0% |
| !! | AAATAGATGTAGCAATATAA+TGG | - | chr8_2:5484616-5484635 | Msa1229640:intron | 20.0% |
| !! | AATAGATGTAGCAATATAAT+GGG | - | chr8_2:5484617-5484636 | Msa1229640:intron | 20.0% |
| !! | CACATATTAATTAACAATCT+AGG | + | chr8_2:5484959-5484978 | None:intergenic | 20.0% |
| !!! | CATTGATTTCATGAATAATT+TGG | - | chr8_2:5485167-5485186 | Msa1229640:intron | 20.0% |
| !! | AATGTGTTAAGATTTGATAA+AGG | + | chr8_2:5485293-5485312 | None:intergenic | 20.0% |
| !!! | TACTATGACTTTATTTCATA+GGG | + | chr8_2:5486353-5486372 | None:intergenic | 20.0% |
| !! | AATTATGAAGGTAAAAAACT+AGG | - | chr8_2:5486402-5486421 | Msa1229640:intron | 20.0% |
| !!! | TTTAAAGTTTGCATCAATAA+TGG | - | chr8_2:5486438-5486457 | Msa1229640:intron | 20.0% |
| !! | ATTAAAGATGCTTACATATA+AGG | + | chr8_2:5486511-5486530 | None:intergenic | 20.0% |
| !! | TTTACGATACTTATAAGATA+AGG | + | chr8_2:5486639-5486658 | None:intergenic | 20.0% |
| !! | ACTTATAAAACCATTTGTAA+GGG | + | chr8_2:5486799-5486818 | None:intergenic | 20.0% |
| !! | TACTTATAAAACCATTTGTA+AGG | + | chr8_2:5486800-5486819 | None:intergenic | 20.0% |
| !! | AGTGGTTATATATTATAACT+CGG | + | chr8_2:5487078-5487097 | None:intergenic | 20.0% |
| !!! | TATATATATTTGTTACAGAG+TGG | + | chr8_2:5487096-5487115 | None:intergenic | 20.0% |
| !! | ACCAAATTTATTAGATAAAG+AGG | - | chr8_2:5487269-5487288 | Msa1229640:intron | 20.0% |
| !! | TCCTCTTTATCTAATAAATT+TGG | + | chr8_2:5487273-5487292 | None:intergenic | 20.0% |
| !! | TACACATATTATAGTAAGAA+AGG | + | chr8_2:5487357-5487376 | None:intergenic | 20.0% |
| !!! | AAAGTTAAGGTTTTAAGTTT+AGG | - | chr8_2:5487994-5488013 | Msa1229640:CDS | 20.0% |
| !!! | GTCTTTTTTTTTTTTTATGG+TGG | + | chr8_2:5488223-5488242 | None:intergenic | 20.0% |
| !!! | TTGGTCACTTAATTTAATTT+TGG | - | chr8_2:5488325-5488344 | Msa1229640:intron | 20.0% |
| !!! | ATCTTTTAAGTCACAAAATT+TGG | - | chr8_2:5488479-5488498 | Msa1229640:intron | 20.0% |
| !!! | AAAACTTGATTTTCTTCTTT+TGG | + | chr8_2:5488799-5488818 | None:intergenic | 20.0% |
| !!! | AAAAATAACACTAATGCTTT+TGG | - | chr8_2:5489198-5489217 | Msa1229640:intron | 20.0% |
| !! | TTTATTTGAATTTGCAGATA+TGG | - | chr8_2:5489253-5489272 | Msa1229640:intron | 20.0% |
| !! | ATAACATCACAATATATACA+AGG | + | chr8_2:5489560-5489579 | None:intergenic | 20.0% |
| !! | ATAGACTATAATTCAATCAA+GGG | + | chr8_2:5490037-5490056 | None:intergenic | 20.0% |
| !! | ATATATAGCTATTGTGAAAT+TGG | - | chr8_2:5490140-5490159 | Msa1229640:CDS | 20.0% |
| ! | ACACTAAGTAATCGTAAATA+AGG | + | chr8_2:5483541-5483560 | None:intergenic | 25.0% |
| ! | ATATAAACCAAAGCTATGTT+TGG | + | chr8_2:5483697-5483716 | None:intergenic | 25.0% |
| !! | GAGAATGATATCTAGAATAA+AGG | + | chr8_2:5484065-5484084 | None:intergenic | 25.0% |
| ! | TTTATTTCCATATTATTGGG+AGG | + | chr8_2:5484171-5484190 | None:intergenic | 25.0% |
| ! | ATATGGAAATAAAGATGAGT+AGG | - | chr8_2:5484178-5484197 | Msa1229640:intron | 25.0% |
| !! | AATAAAAACCACTTGATAGT+TGG | + | chr8_2:5484566-5484585 | None:intergenic | 25.0% |
| ! | ATAGATGTAGCAATATAATG+GGG | - | chr8_2:5484618-5484637 | Msa1229640:intron | 25.0% |
| ! | GGAGGAGAATAAAAATTATT+GGG | - | chr8_2:5484639-5484658 | Msa1229640:intron | 25.0% |
| ! | ATGGACATATTAACAATCTA+GGG | + | chr8_2:5484850-5484869 | None:intergenic | 25.0% |
| ! | TTCATGAAATTAAAGTCACA+TGG | + | chr8_2:5484869-5484888 | None:intergenic | 25.0% |
| ! | AATGGCAAATAGAAAAAAGT+AGG | + | chr8_2:5485082-5485101 | None:intergenic | 25.0% |
| ! | AAAGGTTGTTTATATAGCAA+TGG | - | chr8_2:5485531-5485550 | Msa1229640:CDS | 25.0% |
| !! | TATACAATCATTTGTTACCA+CGG | - | chr8_2:5485751-5485770 | Msa1229640:intron | 25.0% |
| !! | ATTTTTGTCATGAGTTAAGT+TGG | - | chr8_2:5485976-5485995 | Msa1229640:intron | 25.0% |
| !! | TTTTTGTCATGAGTTAAGTT+GGG | - | chr8_2:5485977-5485996 | Msa1229640:intron | 25.0% |
| ! | TGTAACCAAAGAAAATTTCT+AGG | - | chr8_2:5486252-5486271 | Msa1229640:intron | 25.0% |
| ! | ACTTAATGTGAGAAATTCTT+AGG | + | chr8_2:5486288-5486307 | None:intergenic | 25.0% |
| ! | AGAATTTCTCACATTAAGTT+AGG | - | chr8_2:5486289-5486308 | Msa1229640:intron | 25.0% |
| !! | GTACTATGACTTTATTTCAT+AGG | + | chr8_2:5486354-5486373 | None:intergenic | 25.0% |
| ! | ATCCAACAGATTAATTATGA+AGG | - | chr8_2:5486390-5486409 | Msa1229640:intron | 25.0% |
| ! | TACCTTCATAATTAATCTGT+TGG | + | chr8_2:5486395-5486414 | None:intergenic | 25.0% |
| !!! | ATAAAAGGGTGTTTAGATAT+AGG | - | chr8_2:5486540-5486559 | Msa1229640:intron | 25.0% |
| !!! | TAAAAGGGTGTTTAGATATA+GGG | - | chr8_2:5486541-5486560 | Msa1229640:intron | 25.0% |
| !! | TAAGTATCGTAAATATGAGT+TGG | - | chr8_2:5486646-5486665 | Msa1229640:intron | 25.0% |
| ! | CTTATAAAACCATTTGTAAG+GGG | + | chr8_2:5486798-5486817 | None:intergenic | 25.0% |
| ! | TAAAGAGGATAATTAGACAA+TGG | - | chr8_2:5487284-5487303 | Msa1229640:intron | 25.0% |
| !!! | TGGAGTACTTTTTTTATGTT+AGG | - | chr8_2:5487304-5487323 | Msa1229640:intron | 25.0% |
| ! | CTAAATATATGATATGTGAC+AGG | - | chr8_2:5487440-5487459 | Msa1229640:intron | 25.0% |
| ! | CCATAGATGTAATCATAAAT+TGG | + | chr8_2:5487517-5487536 | None:intergenic | 25.0% |
| ! | CCAATTTATGATTACATCTA+TGG | - | chr8_2:5487514-5487533 | Msa1229640:intron | 25.0% |
| ! | AATTCATTGAAGAAAGAAGA+AGG | - | chr8_2:5487571-5487590 | Msa1229640:intron | 25.0% |
| ! | ATCCATATATCAACTAAGAT+TGG | - | chr8_2:5487636-5487655 | Msa1229640:intron | 25.0% |
| ! | TCCATATATCAACTAAGATT+GGG | - | chr8_2:5487637-5487656 | Msa1229640:intron | 25.0% |
| ! | GACACAAAAAATAAACTCAA+GGG | + | chr8_2:5488363-5488382 | None:intergenic | 25.0% |
| ! | TGACACAAAAAATAAACTCA+AGG | + | chr8_2:5488364-5488383 | None:intergenic | 25.0% |
| ! | ATATATGTTCAATGAATGCA+GGG | - | chr8_2:5488664-5488683 | Msa1229640:intron | 25.0% |
| ! | ATGGTGAACTATACATTAAA+AGG | - | chr8_2:5488704-5488723 | Msa1229640:intron | 25.0% |
| ! | AACAATCTTCATCTTAAGTT+GGG | + | chr8_2:5488734-5488753 | None:intergenic | 25.0% |
| !! | GAAAATCAAGTTTTTCTTTG+TGG | - | chr8_2:5488805-5488824 | Msa1229640:intron | 25.0% |
| !!! | TTTTTTTCCTTCTTTCTTTC+AGG | - | chr8_2:5489006-5489025 | Msa1229640:CDS | 25.0% |
| ! | ATCATGAGAATCTTCAATTA+AGG | - | chr8_2:5489050-5489069 | Msa1229640:CDS | 25.0% |
| !! | CAATCTTTTCGAAATTTCTT+TGG | + | chr8_2:5489360-5489379 | None:intergenic | 25.0% |
| ! | TTACTCTCTTAGAAATCAAA+AGG | - | chr8_2:5489473-5489492 | Msa1229640:intron | 25.0% |
| !! | TTTTGTATATGCAACAGAAT+TGG | - | chr8_2:5489854-5489873 | Msa1229640:intron | 25.0% |
| !!! | TGTTTAGCATTGACAAAATA+TGG | - | chr8_2:5489965-5489984 | Msa1229640:intron | 25.0% |
| ! | TAGACTATAATTCAATCAAG+GGG | + | chr8_2:5490036-5490055 | None:intergenic | 25.0% |
| ! | GATAGACTATAATTCAATCA+AGG | + | chr8_2:5490038-5490057 | None:intergenic | 25.0% |
| ! | ATAATTTATCAACATGCTTC+AGG | - | chr8_2:5490097-5490116 | Msa1229640:intron | 25.0% |
| !! | AGTGATCGTTTTCAAATTAT+TGG | - | chr8_2:5490254-5490273 | Msa1229640:five_prime_UTR | 25.0% |
| CATAGCAATTAAATCATGCA+TGG | + | chr8_2:5483127-5483146 | None:intergenic | 30.0% | |
| GAGATAAAGAGATCCAAATT+TGG | + | chr8_2:5483352-5483371 | None:intergenic | 30.0% | |
| !! | TAATCGTAAATAAGGTGTTG+TGG | + | chr8_2:5483533-5483552 | None:intergenic | 30.0% |
| GTGACTTTAAATGTGAGTTT+GGG | + | chr8_2:5483588-5483607 | None:intergenic | 30.0% | |
| ! | GTTTGGATAATGTTTTTCCA+GGG | + | chr8_2:5483680-5483699 | None:intergenic | 30.0% |
| ! | TGTTTGGATAATGTTTTTCC+AGG | + | chr8_2:5483681-5483700 | None:intergenic | 30.0% |
| ACATTATCCAAACATAGCTT+TGG | - | chr8_2:5483687-5483706 | Msa1229640:CDS | 30.0% | |
| ! | ATTTTATATTGGTCAATGGC+TGG | - | chr8_2:5483918-5483937 | Msa1229640:intron | 30.0% |
| AGTCTCAAAAATTACCCATA+TGG | - | chr8_2:5483947-5483966 | Msa1229640:intron | 30.0% | |
| ATGACAATTCTTCTACATAG+TGG | - | chr8_2:5483988-5484007 | Msa1229640:CDS | 30.0% | |
| !! | AGTTATTGGTTCTGTAACAA+TGG | + | chr8_2:5484100-5484119 | None:intergenic | 30.0% |
| AGGATAAACTCACAAGTTAT+TGG | + | chr8_2:5484114-5484133 | None:intergenic | 30.0% | |
| ATGTAGTGTAAAGTTGTTCA+CGG | - | chr8_2:5484233-5484252 | Msa1229640:CDS | 30.0% | |
| !! | TCTAGTTCATGTACATGTTT+TGG | + | chr8_2:5484408-5484427 | None:intergenic | 30.0% |
| GGGAGGAGAATAAAAATTAT+TGG | - | chr8_2:5484638-5484657 | Msa1229640:intron | 30.0% | |
| GAATAAAAATTATTGGGCTG+AGG | - | chr8_2:5484645-5484664 | Msa1229640:intron | 30.0% | |
| CATGGACATATTAACAATCT+AGG | + | chr8_2:5484851-5484870 | None:intergenic | 30.0% | |
| ! | GTAATTGCTGTTGTGTATAA+TGG | + | chr8_2:5485105-5485124 | None:intergenic | 30.0% |
| ATACTTAAGGATTGGAAAGA+TGG | + | chr8_2:5485232-5485251 | None:intergenic | 30.0% | |
| TACATGGTATACTTAAGGAT+TGG | + | chr8_2:5485240-5485259 | None:intergenic | 30.0% | |
| GTGTATACATGGTATACTTA+AGG | + | chr8_2:5485245-5485264 | None:intergenic | 30.0% | |
| !! | TTGATAAAGGTGTTAAGAGT+TGG | + | chr8_2:5485280-5485299 | None:intergenic | 30.0% |
| TTCAAATGCTCCCATTTAAA+AGG | + | chr8_2:5485350-5485369 | None:intergenic | 30.0% | |
| GCTCATGTATAAAATGTTTG+AGG | + | chr8_2:5485862-5485881 | None:intergenic | 30.0% | |
| TAATGTGAGAAATTCTTAGG+TGG | + | chr8_2:5486285-5486304 | None:intergenic | 30.0% | |
| GTAACTCTTATATCTAGTTG+GGG | + | chr8_2:5486481-5486500 | None:intergenic | 30.0% | |
| GGTAACTCTTATATCTAGTT+GGG | + | chr8_2:5486482-5486501 | None:intergenic | 30.0% | |
| TGGTAACTCTTATATCTAGT+TGG | + | chr8_2:5486483-5486502 | None:intergenic | 30.0% | |
| AAGATGCTTACATATAAGGA+CGG | + | chr8_2:5486507-5486526 | None:intergenic | 30.0% | |
| ! | TCTAAACACCCTTTTATTAG+AGG | + | chr8_2:5486537-5486556 | None:intergenic | 30.0% |
| CACTACATCATACACAATTT+CGG | - | chr8_2:5487470-5487489 | Msa1229640:intron | 30.0% | |
| ! | CTTAGTTGATATATGGATTC+AGG | + | chr8_2:5487634-5487653 | None:intergenic | 30.0% |
| ! | TCCCAATCTTAGTTGATATA+TGG | + | chr8_2:5487641-5487660 | None:intergenic | 30.0% |
| ACGATGCATAAAATATGCAA+AGG | - | chr8_2:5488182-5488201 | Msa1229640:intron | 30.0% | |
| ATAAAATATGCAAAGGTCCA+GGG | - | chr8_2:5488189-5488208 | Msa1229640:intron | 30.0% | |
| TGTCTAGCATTATGAGTTAA+GGG | + | chr8_2:5488394-5488413 | None:intergenic | 30.0% | |
| TTGTCTAGCATTATGAGTTA+AGG | + | chr8_2:5488395-5488414 | None:intergenic | 30.0% | |
| ACTCATAATGCTAGACAATT+TGG | - | chr8_2:5488397-5488416 | Msa1229640:intron | 30.0% | |
| ACACTTAGTCCTTCAAATAA+GGG | - | chr8_2:5488502-5488521 | Msa1229640:intron | 30.0% | |
| ! | TATTTCGATCCCTTATTTGA+AGG | + | chr8_2:5488514-5488533 | None:intergenic | 30.0% |
| CATATATGTTCAATGAATGC+AGG | - | chr8_2:5488663-5488682 | Msa1229640:intron | 30.0% | |
| ! | ACAATCTTCATCTTAAGTTG+GGG | + | chr8_2:5488733-5488752 | None:intergenic | 30.0% |
| CAACAATCTTCATCTTAAGT+TGG | + | chr8_2:5488735-5488754 | None:intergenic | 30.0% | |
| CTTAAGATGAAGATTGTTGA+TGG | - | chr8_2:5488736-5488755 | Msa1229640:intron | 30.0% | |
| TAGTTAATGCTTTGTGTGAA+AGG | - | chr8_2:5488854-5488873 | Msa1229640:intron | 30.0% | |
| AGTTAATGCTTTGTGTGAAA+GGG | - | chr8_2:5488855-5488874 | Msa1229640:intron | 30.0% | |
| !! | GAACAAAAAAAAGCACCAAA+AGG | - | chr8_2:5489303-5489322 | Msa1229640:intron | 30.0% |
| ! | AAATTTCTTTGGAGGGAATT+GGG | + | chr8_2:5489349-5489368 | None:intergenic | 30.0% |
| ! | CTTTTCGAAATTTCTTTGGA+GGG | + | chr8_2:5489356-5489375 | None:intergenic | 30.0% |
| ! | TCTTTTCGAAATTTCTTTGG+AGG | + | chr8_2:5489357-5489376 | None:intergenic | 30.0% |
| AGTGGACATTGGATAAATTA+GGG | + | chr8_2:5489416-5489435 | None:intergenic | 30.0% | |
| ! | TGATTTCTAAGAGAGTAAAC+TGG | + | chr8_2:5489471-5489490 | None:intergenic | 30.0% |
| ATCATTGTCTTGATCATAGT+CGG | - | chr8_2:5489582-5489601 | Msa1229640:intron | 30.0% | |
| !! | TGTTTTTGTTACTGTAGTCA+TGG | + | chr8_2:5489667-5489686 | None:intergenic | 30.0% |
| ACAGAGGAAATGTCTTAAAT+TGG | + | chr8_2:5490172-5490191 | None:intergenic | 30.0% | |
| TCTTCTCTTATACCCTTTCT+TGG | - | chr8_2:5482870-5482889 | Msa1229640:three_prime_UTR | 35.0% | |
| ACCCTTTCTTGGCATAAAAA+TGG | - | chr8_2:5482881-5482900 | Msa1229640:three_prime_UTR | 35.0% | |
| !!! | GCCATTTTTATGCCAAGAAA+GGG | + | chr8_2:5482885-5482904 | None:intergenic | 35.0% |
| AAATGGATGATACAATGCAG+TGG | - | chr8_2:5483207-5483226 | Msa1229640:intron | 35.0% | |
| AATGGATGATACAATGCAGT+GGG | - | chr8_2:5483208-5483227 | Msa1229640:intron | 35.0% | |
| TTTCATTGTGAATAGTCCAG+AGG | - | chr8_2:5483268-5483287 | Msa1229640:intron | 35.0% | |
| !!! | GATTCTGTTTTTTCCTTTGG+CGG | + | chr8_2:5483384-5483403 | None:intergenic | 35.0% |
| !!! | GACGATTCTGTTTTTTCCTT+TGG | + | chr8_2:5483387-5483406 | None:intergenic | 35.0% |
| AAAAAACAGAATCGTCGACA+AGG | - | chr8_2:5483391-5483410 | Msa1229640:intron | 35.0% | |
| ! | AAGTTGATCGAGAAAGCAAT+TGG | - | chr8_2:5483429-5483448 | Msa1229640:intron | 35.0% |
| ACGATTACTTAGTGTCTGTT+TGG | - | chr8_2:5483546-5483565 | Msa1229640:intron | 35.0% | |
| CGTGACTTTAAATGTGAGTT+TGG | + | chr8_2:5483589-5483608 | None:intergenic | 35.0% | |
| ! | CTTCATGCTTTTAGTAGTGA+AGG | - | chr8_2:5483634-5483653 | Msa1229640:intron | 35.0% |
| !!! | ATGGGTAATTTTTGAGACTC+TGG | + | chr8_2:5483946-5483965 | None:intergenic | 35.0% |
| CAATAGTAAAGAAACTCCAC+TGG | + | chr8_2:5484015-5484034 | None:intergenic | 35.0% | |
| CAGTGGAGTTTCTTTACTAT+TGG | - | chr8_2:5484013-5484032 | Msa1229640:CDS | 35.0% | |
| TTTACCACCTCCCAATAATA+TGG | - | chr8_2:5484161-5484180 | Msa1229640:intron | 35.0% | |
| ATTTCCATATTATTGGGAGG+TGG | + | chr8_2:5484168-5484187 | None:intergenic | 35.0% | |
| GAGTAGGTGAGAAATTAATG+TGG | - | chr8_2:5484194-5484213 | Msa1229640:intron | 35.0% | |
| ACCTATTACCAACTATCAAG+TGG | - | chr8_2:5484555-5484574 | Msa1229640:intron | 35.0% | |
| !! | ACCACTTGATAGTTGGTAAT+AGG | + | chr8_2:5484559-5484578 | None:intergenic | 35.0% |
| ! | TGCTGTTGTGTATAATGGAA+TGG | + | chr8_2:5485100-5485119 | None:intergenic | 35.0% |
| ATAACCAGCAAATGATGCTA+TGG | + | chr8_2:5485139-5485158 | None:intergenic | 35.0% | |
| AAGATGGAGAAGACTTTCTT+AGG | + | chr8_2:5485216-5485235 | None:intergenic | 35.0% | |
| TACTTACGATGGTGTATACA+TGG | + | chr8_2:5485256-5485275 | None:intergenic | 35.0% | |
| TAAGAGTTGGATACTTACGA+TGG | + | chr8_2:5485267-5485286 | None:intergenic | 35.0% | |
| CGCTCGTGTGTTAATAAATT+TGG | + | chr8_2:5485442-5485461 | None:intergenic | 35.0% | |
| ! | TAATTATAAAGCATTCGCCG+TGG | + | chr8_2:5485771-5485790 | None:intergenic | 35.0% |
| TAAACCAGGACCAAGAAATT+TGG | - | chr8_2:5486138-5486157 | Msa1229640:intron | 35.0% | |
| TGTGACCAAACCAAATTTCT+TGG | + | chr8_2:5486151-5486170 | None:intergenic | 35.0% | |
| TCTTCTCTCTCTTCTTTCTT+TGG | - | chr8_2:5486228-5486247 | Msa1229640:intron | 35.0% | |
| GACATTATTCCCCTTACAAA+TGG | - | chr8_2:5486786-5486805 | Msa1229640:intron | 35.0% | |
| ATTGTGTATGATGTAGTGAG+TGG | + | chr8_2:5487468-5487487 | None:intergenic | 35.0% | |
| ATATGGATTCAGGAGTAGTA+AGG | + | chr8_2:5487624-5487643 | None:intergenic | 35.0% | |
| AATGGTACCTCTATTTCATG+TGG | - | chr8_2:5487695-5487714 | Msa1229640:intron | 35.0% | |
| !!! | GTTCTTGTCACTTGGTTTTA+TGG | - | chr8_2:5487736-5487755 | Msa1229640:intron | 35.0% |
| CCTCAAAACTTACTTGAACA+TGG | + | chr8_2:5487831-5487850 | None:intergenic | 35.0% | |
| ! | CCATGTTCAAGTAAGTTTTG+AGG | - | chr8_2:5487828-5487847 | Msa1229640:CDS | 35.0% |
| AAGTTTAGGTCTTTCAAACC+AGG | - | chr8_2:5488008-5488027 | Msa1229640:CDS | 35.0% | |
| ATAAAATTAGAGGACTCACC+TGG | + | chr8_2:5488029-5488048 | None:intergenic | 35.0% | |
| CATAAAATATGCAAAGGTCC+AGG | - | chr8_2:5488188-5488207 | Msa1229640:intron | 35.0% | |
| TTCCATCGAATTTCATCTGT+AGG | + | chr8_2:5488245-5488264 | None:intergenic | 35.0% | |
| GACACTTAGTCCTTCAAATA+AGG | - | chr8_2:5488501-5488520 | Msa1229640:intron | 35.0% | |
| TGGAATGCTGTTAAGAACAA+TGG | + | chr8_2:5488779-5488798 | None:intergenic | 35.0% | |
| GTTAATGCTTTGTGTGAAAG+GGG | - | chr8_2:5488856-5488875 | Msa1229640:intron | 35.0% | |
| GTTGTAACCTGAAAGAAAGA+AGG | + | chr8_2:5489016-5489035 | None:intergenic | 35.0% | |
| TGGGAAAACCAAATTCTTCT+GGG | + | chr8_2:5489089-5489108 | None:intergenic | 35.0% | |
| AATTTGCAGATATGGCTAGT+TGG | - | chr8_2:5489261-5489280 | Msa1229640:intron | 35.0% | |
| ! | GGTACAAACAATGATCCTTT+TGG | + | chr8_2:5489321-5489340 | None:intergenic | 35.0% |
| ! | GAAATTTCTTTGGAGGGAAT+TGG | + | chr8_2:5489350-5489369 | None:intergenic | 35.0% |
| TAAATTAGGGGGAGTTATCA+TGG | + | chr8_2:5489403-5489422 | None:intergenic | 35.0% | |
| TGGACATTGGATAAATTAGG+GGG | + | chr8_2:5489414-5489433 | None:intergenic | 35.0% | |
| GTGGACATTGGATAAATTAG+GGG | + | chr8_2:5489415-5489434 | None:intergenic | 35.0% | |
| GAGTGGACATTGGATAAATT+AGG | + | chr8_2:5489417-5489436 | None:intergenic | 35.0% | |
| AGGGGATGATTAATCTTCAA+TGG | + | chr8_2:5490018-5490037 | None:intergenic | 35.0% | |
| GGGTATAAGAGAAGAGTCAA+AGG | + | chr8_2:5482865-5482884 | None:intergenic | 40.0% | |
| !!! | CGCCATTTTTATGCCAAGAA+AGG | + | chr8_2:5482886-5482905 | None:intergenic | 40.0% |
| ATAAAAATGGCGTCCAAACC+TGG | - | chr8_2:5482894-5482913 | Msa1229640:three_prime_UTR | 40.0% | |
| ATCAGTAAGTATGCCAGGTT+TGG | + | chr8_2:5482910-5482929 | None:intergenic | 40.0% | |
| AACCTGGCATACTTACTGAT+TGG | - | chr8_2:5482910-5482929 | Msa1229640:three_prime_UTR | 40.0% | |
| ! | TGTGTGCTCTTTGCTATGAA+TGG | + | chr8_2:5483245-5483264 | None:intergenic | 40.0% |
| TGTGAATAGTCCAGAGGAAA+AGG | - | chr8_2:5483274-5483293 | Msa1229640:intron | 40.0% | |
| CCATCATATATGGGAAGATG+AGG | + | chr8_2:5483313-5483332 | None:intergenic | 40.0% | |
| CCTCATCTTCCCATATATGA+TGG | - | chr8_2:5483310-5483329 | Msa1229640:intron | 40.0% | |
| ! | TCTTCCCATATATGATGGTG+AGG | - | chr8_2:5483315-5483334 | Msa1229640:intron | 40.0% |
| GCATCCTCACCATCATATAT+GGG | + | chr8_2:5483322-5483341 | None:intergenic | 40.0% | |
| AGCATCCTCACCATCATATA+TGG | + | chr8_2:5483323-5483342 | None:intergenic | 40.0% | |
| GGATGCTACATGACCAAATT+TGG | - | chr8_2:5483336-5483355 | Msa1229640:intron | 40.0% | |
| ATTGAGATACGATATTGCCC+TGG | - | chr8_2:5483660-5483679 | Msa1229640:CDS | 40.0% | |
| TTACCCATATGGAGAACTAG+TGG | - | chr8_2:5483958-5483977 | Msa1229640:intron | 40.0% | |
| ! | ACACCACTAGTTCTCCATAT+GGG | + | chr8_2:5483964-5483983 | None:intergenic | 40.0% |
| ! | GATGTAGCAATATAATGGGG+AGG | - | chr8_2:5484621-5484640 | Msa1229640:intron | 40.0% |
| TAGGCTATGTGTTCTGCAAA+TGG | + | chr8_2:5485063-5485082 | None:intergenic | 40.0% | |
| AGTAACACAGCTAAAACTCG+CGG | - | chr8_2:5485468-5485487 | Msa1229640:CDS | 40.0% | |
| AGACACGCTTCGAATAAGAT+TGG | - | chr8_2:5485583-5485602 | Msa1229640:CDS | 40.0% | |
| TAGCGGAAGTCATCTCATTA+AGG | - | chr8_2:5485652-5485671 | Msa1229640:intron | 40.0% | |
| GAGAAACTGTTCTGTAAACC+AGG | - | chr8_2:5486124-5486143 | Msa1229640:intron | 40.0% | |
| CAAACCAAATTTCTTGGTCC+TGG | + | chr8_2:5486145-5486164 | None:intergenic | 40.0% | |
| CAGGACCAAGAAATTTGGTT+TGG | - | chr8_2:5486143-5486162 | Msa1229640:intron | 40.0% | |
| ! | CAGGGCCTAGAAATTTTCTT+TGG | + | chr8_2:5486260-5486279 | None:intergenic | 40.0% |
| ! | CAAAGAAAATTTCTAGGCCC+TGG | - | chr8_2:5486258-5486277 | Msa1229640:intron | 40.0% |
| AGAAATTCTTAGGTGGTCCA+GGG | + | chr8_2:5486278-5486297 | None:intergenic | 40.0% | |
| TCACATTAAGTTAGGCAGCT+TGG | - | chr8_2:5486297-5486316 | Msa1229640:intron | 40.0% | |
| ! | ACTACCAAAGTACTCTAGGT+TGG | + | chr8_2:5486327-5486346 | None:intergenic | 40.0% |
| ! | AACCTAGAGTACTTTGGTAG+TGG | - | chr8_2:5486326-5486345 | Msa1229640:intron | 40.0% |
| TATCTAGTTGGGGAACGATT+TGG | + | chr8_2:5486471-5486490 | None:intergenic | 40.0% | |
| TGCTTACATATAAGGACGGA+TGG | + | chr8_2:5486503-5486522 | None:intergenic | 40.0% | |
| ! | AGGGTGTTTAGATATAGGGA+CGG | - | chr8_2:5486545-5486564 | Msa1229640:intron | 40.0% |
| ! | AGATAAGGAGTGCATCTCTT+AGG | + | chr8_2:5486624-5486643 | None:intergenic | 40.0% |
| TGCATCAAATCTAGTCGTGT+TGG | - | chr8_2:5486729-5486748 | Msa1229640:intron | 40.0% | |
| AGGTACCATTCAGAAGATTG+AGG | + | chr8_2:5487685-5487704 | None:intergenic | 40.0% | |
| TGAATGGCCACATGAAATAG+AGG | + | chr8_2:5487705-5487724 | None:intergenic | 40.0% | |
| AGAACAGACCAAAAGGTGAA+TGG | + | chr8_2:5487721-5487740 | None:intergenic | 40.0% | |
| AGTGACAAGAACAGACCAAA+AGG | + | chr8_2:5487728-5487747 | None:intergenic | 40.0% | |
| TTTGGTCTGTTCTTGTCACT+TGG | - | chr8_2:5487728-5487747 | Msa1229640:intron | 40.0% | |
| CTTACTTGAACATGGAACCT+TGG | + | chr8_2:5487823-5487842 | None:intergenic | 40.0% | |
| AGCAGAGTTGAGCAAAGTTA+AGG | - | chr8_2:5487981-5488000 | Msa1229640:CDS | 40.0% | |
| ! | TGAGCTTAGTTCAGTTGGTA+GGG | - | chr8_2:5488159-5488178 | Msa1229640:intron | 40.0% |
| GACCTACAGATGAAATTCGA+TGG | - | chr8_2:5488240-5488259 | Msa1229640:intron | 40.0% | |
| ! | GGAGACTTGCTCAATAGATA+TGG | - | chr8_2:5488685-5488704 | Msa1229640:intron | 40.0% |
| TCTTTGTGGTAGACTTGACA+AGG | - | chr8_2:5488819-5488838 | Msa1229640:intron | 40.0% | |
| !! | TTTGTGTGAAAGGGGTACTA+AGG | - | chr8_2:5488864-5488883 | Msa1229640:intron | 40.0% |
| CTGGGAAAACCAAATTCTTC+TGG | + | chr8_2:5489090-5489109 | None:intergenic | 40.0% | |
| !!! | CAGAAGAATTTGGTTTTCCC+AGG | - | chr8_2:5489088-5489107 | Msa1229640:CDS | 40.0% |
| CCTTTGCAGAATTTGATCCT+GGG | + | chr8_2:5489108-5489127 | None:intergenic | 40.0% | |
| ACCTTTGCAGAATTTGATCC+TGG | + | chr8_2:5489109-5489128 | None:intergenic | 40.0% | |
| TTTGGAGGGAATTGGGAAAA+TGG | + | chr8_2:5489342-5489361 | None:intergenic | 40.0% | |
| ATCTACTAACCTCACAAGAG+TGG | + | chr8_2:5489434-5489453 | None:intergenic | 40.0% | |
| TATTGCACGCCTTAGAAGAT+TGG | - | chr8_2:5489917-5489936 | Msa1229640:intron | 40.0% | |
| ATTGCACGCCTTAGAAGATT+GGG | - | chr8_2:5489918-5489937 | Msa1229640:intron | 40.0% | |
| ATGAACGTCCCAATCTTCTA+AGG | + | chr8_2:5489929-5489948 | None:intergenic | 40.0% | |
| TGCTTCAGGTATTATCAGCA+AGG | - | chr8_2:5490111-5490130 | Msa1229640:intron | 40.0% | |
| TTCCTCTGTACTAGCATTTG+TGG | - | chr8_2:5490183-5490202 | Msa1229640:exon | 40.0% | |
| ! | GCATACTTACTGATTGGCCA+TGG | - | chr8_2:5482916-5482935 | Msa1229640:three_prime_UTR | 45.0% |
| ! | TTACTGAGGTCCTTTTCCTC+TGG | + | chr8_2:5483287-5483306 | None:intergenic | 45.0% |
| GGAAGATGAGGAAGTTACTG+AGG | + | chr8_2:5483301-5483320 | None:intergenic | 45.0% | |
| ! | TTTTTCCTTTGGCGGTTCGA+TGG | + | chr8_2:5483376-5483395 | None:intergenic | 45.0% |
| ! | CACACCACTAGTTCTCCATA+TGG | + | chr8_2:5483965-5483984 | None:intergenic | 45.0% |
| CATATGGAGAACTAGTGGTG+TGG | - | chr8_2:5483963-5483982 | Msa1229640:intron | 45.0% | |
| !! | TCTTCTACATAGTGGACCAG+TGG | - | chr8_2:5483996-5484015 | Msa1229640:CDS | 45.0% |
| GCATCCATAGCATCATTTGC+TGG | - | chr8_2:5485132-5485151 | Msa1229640:CDS | 45.0% | |
| GTCCCATTTCTCTTGAACCA+CGG | - | chr8_2:5485674-5485693 | Msa1229640:intron | 45.0% | |
| TGCCGTGGTTCAAGAGAAAT+GGG | + | chr8_2:5485679-5485698 | None:intergenic | 45.0% | |
| ATGCCGTGGTTCAAGAGAAA+TGG | + | chr8_2:5485680-5485699 | None:intergenic | 45.0% | |
| GAGAAATTCTTAGGTGGTCC+AGG | + | chr8_2:5486279-5486298 | None:intergenic | 45.0% | |
| ! | GACCACTACCAAAGTACTCT+AGG | + | chr8_2:5486331-5486350 | None:intergenic | 45.0% |
| GTGTTTAGATATAGGGACGG+AGG | - | chr8_2:5486548-5486567 | Msa1229640:intron | 45.0% | |
| ! | ATCTAGTCGTGTTGGTCATG+AGG | - | chr8_2:5486737-5486756 | Msa1229640:intron | 45.0% |
| ! | TCTAGTCGTGTTGGTCATGA+GGG | - | chr8_2:5486738-5486757 | Msa1229640:intron | 45.0% |
| TGTGTCAAATGCACCACATC+TGG | + | chr8_2:5487601-5487620 | None:intergenic | 45.0% | |
| TTCAGAAGATTGAGGTGAGG+AGG | + | chr8_2:5487677-5487696 | None:intergenic | 45.0% | |
| CCATTCAGAAGATTGAGGTG+AGG | + | chr8_2:5487680-5487699 | None:intergenic | 45.0% | |
| CCTCACCTCAATCTTCTGAA+TGG | - | chr8_2:5487677-5487696 | Msa1229640:intron | 45.0% | |
| ! | TCATGTGGCCATTCACCTTT+TGG | - | chr8_2:5487710-5487729 | Msa1229640:intron | 45.0% |
| GTGAGCTTAGTTCAGTTGGT+AGG | - | chr8_2:5488158-5488177 | Msa1229640:intron | 45.0% | |
| ! | TTATGGTGGAGTTTGAACCC+TGG | + | chr8_2:5488209-5488228 | None:intergenic | 45.0% |
| !! | GATTGTTGATGGCAGTAGCT+TGG | - | chr8_2:5488747-5488766 | Msa1229640:intron | 45.0% |
| !! | GTGAAAGGGGTACTAAGGTA+TGG | - | chr8_2:5488869-5488888 | Msa1229640:intron | 45.0% |
| !! | CAAATTCTTCTGGGACTTCG+AGG | + | chr8_2:5489080-5489099 | None:intergenic | 45.0% |
| CTCGAAGTCCCAGAAGAATT+TGG | - | chr8_2:5489078-5489097 | Msa1229640:CDS | 45.0% | |
| CCCAGGATCAAATTCTGCAA+AGG | - | chr8_2:5489105-5489124 | Msa1229640:CDS | 45.0% | |
| GCTAGTTGGAGATCAATGTG+AGG | - | chr8_2:5489275-5489294 | Msa1229640:intron | 45.0% | |
| AGTTGGAGATCAATGTGAGG+AGG | - | chr8_2:5489278-5489297 | Msa1229640:intron | 45.0% | |
| ATCCAATGTCCACTCTTGTG+AGG | - | chr8_2:5489422-5489441 | Msa1229640:intron | 45.0% | |
| AACCTCACAAGAGTGGACAT+TGG | + | chr8_2:5489427-5489446 | None:intergenic | 45.0% | |
| AGTCGTGAGTCGTGACATTA+AGG | + | chr8_2:5489696-5489715 | None:intergenic | 45.0% | |
| CATGCACTCATGACTCTTCT+TGG | + | chr8_2:5489883-5489902 | None:intergenic | 45.0% | |
| CAAGAAGAGTCATGAGTGCA+TGG | - | chr8_2:5489881-5489900 | Msa1229640:intron | 45.0% | |
| GATTGGGACGTTCATGAATG+TGG | - | chr8_2:5489934-5489953 | Msa1229640:intron | 45.0% | |
| !! | AATAAGATAAAAATTTAATT+CGG | - | chr8_2:5485790-5485809 | Msa1229640:intron | 5.0% |
| !! | TTATAATGAATTAAAATTAA+CGG | + | chr8_2:5485898-5485917 | None:intergenic | 5.0% |
| !! | TAAAATGTTAAATTAAATAA+AGG | + | chr8_2:5487238-5487257 | None:intergenic | 5.0% |
| !! | AAAATATTATAACATTTAAA+TGG | + | chr8_2:5488112-5488131 | None:intergenic | 5.0% |
| GGCCAATCAGTAAGTATGCC+AGG | + | chr8_2:5482915-5482934 | None:intergenic | 50.0% | |
| GAAACCTTGAATCTCCCGAG+AGG | + | chr8_2:5482945-5482964 | None:intergenic | 50.0% | |
| CCATGTGATTGAGTATGCCG+TGG | + | chr8_2:5485694-5485713 | None:intergenic | 50.0% | |
| CCACGGCATACTCAATCACA+TGG | - | chr8_2:5485691-5485710 | Msa1229640:intron | 50.0% | |
| ! | CCAAAGTACTCTAGGTTGGC+AGG | + | chr8_2:5486323-5486342 | None:intergenic | 50.0% |
| ! | CCTGCCAACCTAGAGTACTT+TGG | - | chr8_2:5486320-5486339 | Msa1229640:intron | 50.0% |
| ! | AGAAGAAGGTGCACCAGATG+TGG | - | chr8_2:5487585-5487604 | Msa1229640:intron | 50.0% |
| AGATTGAGGTGAGGAGGCTA+AGG | + | chr8_2:5487671-5487690 | None:intergenic | 50.0% | |
| CCAACTGAACTAAGCTCACG+AGG | + | chr8_2:5488157-5488176 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAGTTCAGT+TGG | - | chr8_2:5488154-5488173 | Msa1229640:intron | 50.0% | |
| TGATGGCAGTAGCTTGGTTG+TGG | - | chr8_2:5488753-5488772 | Msa1229640:intron | 50.0% | |
| TTAGGGGGAGTTATCATGGC+TGG | + | chr8_2:5489399-5489418 | None:intergenic | 50.0% | |
| ATGAGTGCATGGCGTATTGC+TGG | - | chr8_2:5489892-5489911 | Msa1229640:intron | 50.0% | |
| TGGCAAGCAAGTCTTCAGCA+TGG | - | chr8_2:5489985-5490004 | Msa1229640:intron | 50.0% | |
| GGCAAGCAAGTCTTCAGCAT+GGG | - | chr8_2:5489986-5490005 | Msa1229640:intron | 50.0% | |
| CGCCACAAATGCTAGTACAG+AGG | + | chr8_2:5490188-5490207 | None:intergenic | 50.0% | |
| ! | GATTGGCCATGGACACCTCT+CGG | - | chr8_2:5482927-5482946 | Msa1229640:three_prime_UTR | 55.0% |
| ATTGGCCATGGACACCTCTC+GGG | - | chr8_2:5482928-5482947 | Msa1229640:three_prime_UTR | 55.0% | |
| !! | AATCTCCCGAGAGGTGTCCA+TGG | + | chr8_2:5482936-5482955 | None:intergenic | 55.0% |
| GACACCTCTCGGGAGATTCA+AGG | - | chr8_2:5482938-5482957 | Msa1229640:three_prime_UTR | 55.0% | |
| AAGCTCACGAGGACGTCTGT+AGG | + | chr8_2:5488146-5488165 | None:intergenic | 55.0% | |
| TCTCGCCATCGAACCGCCAA+AGG | - | chr8_2:5483368-5483387 | Msa1229640:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 5482810 | 5490283 | 5482810 | ID=Msa1229640;Name=Msa1229640 |
| chr8_2 | mRNA | 5482810 | 5490283 | 5482810 | ID=Msa1229640-mRNA-1;Parent=Msa1229640;Name=Msa1229640-mRNA-1;_AED=0.07;_eAED=0.07;_QI=90|1|1|1|1|1|10|239|622 |
| chr8_2 | exon | 5482810 | 5483222 | 5482810 | ID=Msa1229640-mRNA-1:exon:1911;Parent=Msa1229640-mRNA-1 |
| chr8_2 | exon | 5483650 | 5483823 | 5483650 | ID=Msa1229640-mRNA-1:exon:1910;Parent=Msa1229640-mRNA-1 |
| chr8_2 | exon | 5483967 | 5484065 | 5483967 | ID=Msa1229640-mRNA-1:exon:1909;Parent=Msa1229640-mRNA-1 |
| chr8_2 | exon | 5484208 | 5484408 | 5484208 | ID=Msa1229640-mRNA-1:exon:1908;Parent=Msa1229640-mRNA-1 |
| chr8_2 | exon | 5485064 | 5485171 | 5485064 | ID=Msa1229640-mRNA-1:exon:1907;Parent=Msa1229640-mRNA-1 |
| chr8_2 | exon | 5485256 | 5485631 | 5485256 | ID=Msa1229640-mRNA-1:exon:1906;Parent=Msa1229640-mRNA-1 |
| chr8_2 | exon | 5487825 | 5488044 | 5487825 | ID=Msa1229640-mRNA-1:exon:1905;Parent=Msa1229640-mRNA-1 |
| chr8_2 | exon | 5488973 | 5489205 | 5488973 | ID=Msa1229640-mRNA-1:exon:1904;Parent=Msa1229640-mRNA-1 |
| chr8_2 | exon | 5489643 | 5489866 | 5489643 | ID=Msa1229640-mRNA-1:exon:1903;Parent=Msa1229640-mRNA-1 |
| chr8_2 | exon | 5490134 | 5490283 | 5490134 | ID=Msa1229640-mRNA-1:exon:1902;Parent=Msa1229640-mRNA-1 |
| chr8_2 | five_prime_UTR | 5490194 | 5490283 | 5490194 | ID=Msa1229640-mRNA-1:five_prime_utr;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5490134 | 5490193 | 5490134 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5489643 | 5489866 | 5489643 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5488973 | 5489205 | 5488973 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5487825 | 5488044 | 5487825 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5485256 | 5485631 | 5485256 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5485064 | 5485171 | 5485064 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5484208 | 5484408 | 5484208 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5483967 | 5484065 | 5483967 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5483650 | 5483823 | 5483650 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | CDS | 5483049 | 5483222 | 5483049 | ID=Msa1229640-mRNA-1:cds;Parent=Msa1229640-mRNA-1 |
| chr8_2 | three_prime_UTR | 5482810 | 5483048 | 5482810 | ID=Msa1229640-mRNA-1:three_prime_utr;Parent=Msa1229640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
