Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272340 | sp|F4HVY0|CER1_ARATH | 61.859 | 624 | 233 | 2 | 1 | 619 | 1 | 624 | 0.0 | 813 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272340 | G7LDH6 | 98.553 | 622 | 9 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1280 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043680 | Msa1272340 | 0.803631 | 3.178663e-49 | -8.615850e-47 |
| Msa0072820 | Msa1272340 | 0.800336 | 1.512160e-48 | -8.615850e-47 |
| Msa0090860 | Msa1272340 | 0.810717 | 1.003155e-50 | -8.615850e-47 |
| Msa0110710 | Msa1272340 | 0.804789 | 1.824742e-49 | -8.615850e-47 |
| Msa0607280 | Msa1272340 | 0.809098 | 2.237562e-50 | -8.615850e-47 |
| Msa0609790 | Msa1272340 | 0.842271 | 2.863250e-58 | -8.615850e-47 |
| Msa0617120 | Msa1272340 | 0.849643 | 2.835177e-60 | -8.615850e-47 |
| Msa0633860 | Msa1272340 | 0.847125 | 1.409674e-59 | -8.615850e-47 |
| Msa0634420 | Msa1272340 | 0.813258 | 2.803815e-51 | -8.615850e-47 |
| Msa0636720 | Msa1272340 | 0.834856 | 2.353169e-56 | -8.615850e-47 |
| Msa0638710 | Msa1272340 | 0.816864 | 4.439377e-52 | -8.615850e-47 |
| Msa0640880 | Msa1272340 | 0.806305 | 8.776206e-50 | -8.615850e-47 |
| Msa0738880 | Msa1272340 | 0.812456 | 4.200495e-51 | -8.615850e-47 |
| Msa0740350 | Msa1272340 | -0.800829 | 1.199261e-48 | -8.615850e-47 |
| Msa0783280 | Msa1272340 | 0.821245 | 4.473402e-53 | -8.615850e-47 |
| Msa0790640 | Msa1272340 | 0.808061 | 3.726454e-50 | -8.615850e-47 |
| Msa0794130 | Msa1272340 | 0.820295 | 7.395482e-53 | -8.615850e-47 |
| Msa0803130 | Msa1272340 | 0.803628 | 3.183783e-49 | -8.615850e-47 |
| Msa0819320 | Msa1272340 | 0.811974 | 5.353617e-51 | -8.615850e-47 |
| Msa0819370 | Msa1272340 | 0.812327 | 4.483372e-51 | -8.615850e-47 |
| Msa0825960 | Msa1272340 | 0.801067 | 1.072274e-48 | -8.615850e-47 |
| Msa0122210 | Msa1272340 | 0.803126 | 4.044484e-49 | -8.615850e-47 |
| Msa0140290 | Msa1272340 | 0.817247 | 3.641267e-52 | -8.615850e-47 |
| Msa1229640 | Msa1272340 | 0.974144 | 1.215153e-137 | -8.615850e-47 |
| Msa1239900 | Msa1272340 | 0.814359 | 1.604225e-51 | -8.615850e-47 |
| Msa1263590 | Msa1272340 | 0.858794 | 6.448206e-63 | -8.615850e-47 |
| Msa1263670 | Msa1272340 | 0.857427 | 1.644585e-62 | -8.615850e-47 |
| Msa1272340 | Msa1281270 | 0.807643 | 4.572745e-50 | -8.615850e-47 |
| Msa1272340 | Msa1310250 | 0.985469 | 1.155111e-163 | -8.615850e-47 |
| Msa1272340 | Msa1320380 | 0.818533 | 1.865130e-52 | -8.615850e-47 |
| Msa1272340 | Msa1347030 | 0.854552 | 1.141142e-61 | -8.615850e-47 |
| Msa1272340 | Msa1349810 | 0.826775 | 2.254681e-54 | -8.615850e-47 |
| Msa1272340 | Msa1358340 | 0.808626 | 2.823766e-50 | -8.615850e-47 |
| Msa1272340 | Msa1375780 | 0.816790 | 4.611296e-52 | -8.615850e-47 |
| Msa1272340 | Msa1394370 | -0.810106 | 1.358998e-50 | -8.615850e-47 |
| Msa1272340 | Msa1466130 | -0.805274 | 1.444540e-49 | -8.615850e-47 |
| Msa1272340 | Msa1466350 | 0.818207 | 2.210559e-52 | -8.615850e-47 |
| Msa0373220 | Msa1272340 | 0.807344 | 5.292324e-50 | -8.615850e-47 |
| Msa0380060 | Msa1272340 | 0.801282 | 9.690049e-49 | -8.615850e-47 |
| Msa0392050 | Msa1272340 | 0.811246 | 7.704494e-51 | -8.615850e-47 |
| Msa0393880 | Msa1272340 | 0.831917 | 1.271764e-55 | -8.615850e-47 |
| Msa0401340 | Msa1272340 | 0.810174 | 1.314282e-50 | -8.615850e-47 |
| Msa0404070 | Msa1272340 | 0.820336 | 7.238287e-53 | -8.615850e-47 |
| Msa0429270 | Msa1272340 | 0.800721 | 1.261617e-48 | -8.615850e-47 |
| Msa0437550 | Msa1272340 | 0.811137 | 8.135350e-51 | -8.615850e-47 |
| Msa0441180 | Msa1272340 | 0.803680 | 3.105124e-49 | -8.615850e-47 |
| Msa0441670 | Msa1272340 | 0.854037 | 1.606623e-61 | -8.615850e-47 |
| Msa0448120 | Msa1272340 | 0.807199 | 5.678827e-50 | -8.615850e-47 |
| Msa0468020 | Msa1272340 | 0.809551 | 1.789663e-50 | -8.615850e-47 |
| Msa0469950 | Msa1272340 | 0.809381 | 1.946109e-50 | -8.615850e-47 |
| Msa0472270 | Msa1272340 | 0.805243 | 1.466734e-49 | -8.615850e-47 |
| Msa0480430 | Msa1272340 | 0.810703 | 1.010318e-50 | -8.615850e-47 |
| Msa0481490 | Msa1272340 | 0.815733 | 7.947601e-52 | -8.615850e-47 |
| Msa1019230 | Msa1272340 | -0.804101 | 2.539464e-49 | -8.615850e-47 |
| Msa1030820 | Msa1272340 | 0.805805 | 1.117841e-49 | -8.615850e-47 |
| Msa1030870 | Msa1272340 | 0.827700 | 1.353271e-54 | -8.615850e-47 |
| Msa0253160 | Msa1272340 | 0.814159 | 1.775945e-51 | -8.615850e-47 |
| Msa0265580 | Msa1272340 | 0.804862 | 1.761577e-49 | -8.615850e-47 |
| Msa0291940 | Msa1272340 | 0.817977 | 2.492622e-52 | -8.615850e-47 |
| Msa0296000 | Msa1272340 | 0.830455 | 2.909475e-55 | -8.615850e-47 |
| Msa0303440 | Msa1272340 | 0.811095 | 8.310934e-51 | -8.615850e-47 |
| Msa0303500 | Msa1272340 | 0.808098 | 3.659289e-50 | -8.615850e-47 |
| Msa0311910 | Msa1272340 | 0.814951 | 1.185732e-51 | -8.615850e-47 |
| Msa0322480 | Msa1272340 | 0.800737 | 1.252735e-48 | -8.615850e-47 |
| Msa0333900 | Msa1272340 | 0.806522 | 7.895097e-50 | -8.615850e-47 |
| Msa0334020 | Msa1272340 | 0.812320 | 4.499398e-51 | -8.615850e-47 |
| Msa0344680 | Msa1272340 | 0.812646 | 3.817439e-51 | -8.615850e-47 |
| Msa0347280 | Msa1272340 | 0.818396 | 2.003083e-52 | -8.615850e-47 |
| Msa1133740 | Msa1272340 | 0.802049 | 6.744752e-49 | -8.615850e-47 |
| Msa1144730 | Msa1272340 | 0.813652 | 2.297207e-51 | -8.615850e-47 |
| Msa1157680 | Msa1272340 | 0.817407 | 3.350633e-52 | -8.615850e-47 |
| Msa1165810 | Msa1272340 | 0.808768 | 2.632624e-50 | -8.615850e-47 |
| Msa1177960 | Msa1272340 | 0.803338 | 3.656113e-49 | -8.615850e-47 |
| Msa1181510 | Msa1272340 | 0.815321 | 9.815802e-52 | -8.615850e-47 |
| Msa1220680 | Msa1272340 | 0.809445 | 1.885364e-50 | -8.615850e-47 |
| Msa0489330 | Msa1272340 | 0.821597 | 3.710594e-53 | -8.615850e-47 |
| Msa0524960 | Msa1272340 | 0.809965 | 1.457560e-50 | -8.615850e-47 |
| Msa0537870 | Msa1272340 | 0.866109 | 3.626036e-65 | -8.615850e-47 |
| Msa0537880 | Msa1272340 | 0.839057 | 1.989344e-57 | -8.615850e-47 |
| Msa0538260 | Msa1272340 | 0.834761 | 2.486706e-56 | -8.615850e-47 |
| Msa0549760 | Msa1272340 | 0.820791 | 5.690831e-53 | -8.615850e-47 |
| Msa0859510 | Msa1272340 | 0.808208 | 3.466565e-50 | -8.615850e-47 |
| Msa0887280 | Msa1272340 | 0.812068 | 5.104720e-51 | -8.615850e-47 |
| Msa0910010 | Msa1272340 | 0.804760 | 1.850840e-49 | -8.615850e-47 |
| Msa0950900 | Msa1272340 | 0.810847 | 9.401324e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272340 | MtrunA17_Chr8g0337081 | 98.553 | 622 | 9 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1280 |
| Msa1272340 | MtrunA17_Chr8g0337101 | 64.563 | 618 | 218 | 1 | 1 | 617 | 37 | 654 | 0.0 | 845 |
| Msa1272340 | MtrunA17_Chr7g0256371 | 66.234 | 616 | 202 | 2 | 1 | 616 | 10 | 619 | 0.0 | 844 |
| Msa1272340 | MtrunA17_Chr7g0256391 | 65.097 | 616 | 211 | 2 | 1 | 616 | 1 | 612 | 0.0 | 830 |
| Msa1272340 | MtrunA17_Chr7g0256411 | 64.830 | 617 | 212 | 2 | 1 | 617 | 32 | 643 | 0.0 | 825 |
| Msa1272340 | MtrunA17_Chr4g0026761 | 65.434 | 622 | 211 | 2 | 1 | 622 | 1 | 618 | 0.0 | 821 |
| Msa1272340 | MtrunA17_Chr4g0026811 | 64.693 | 456 | 158 | 1 | 20 | 475 | 6 | 458 | 0.0 | 583 |
| Msa1272340 | MtrunA17_Chr4g0073231 | 34.355 | 620 | 395 | 6 | 8 | 615 | 5 | 624 | 3.86e-129 | 393 |
| Msa1272340 | MtrunA17_Chr2g0305431 | 31.541 | 279 | 186 | 2 | 8 | 283 | 5 | 281 | 9.36e-55 | 188 |
| Msa1272340 | MtrunA17_Chr2g0305451 | 34.722 | 216 | 134 | 3 | 407 | 615 | 2 | 217 | 8.98e-38 | 139 |
| Msa1272340 | MtrunA17_Chr4g0026821 | 55.435 | 92 | 40 | 1 | 474 | 565 | 3 | 93 | 7.94e-27 | 105 |
| Msa1272340 | MtrunA17_Chr4g0026831 | 71.111 | 45 | 13 | 0 | 573 | 617 | 1 | 45 | 2.35e-18 | 79.0 |
| Msa1272340 | MtrunA17_Chr2g0305441 | 30.952 | 126 | 87 | 0 | 282 | 407 | 33 | 158 | 3.51e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272340 | AT1G02205.2 | 61.859 | 624 | 233 | 2 | 1 | 619 | 1 | 624 | 0.0 | 813 |
| Msa1272340 | AT1G02205.3 | 61.208 | 629 | 234 | 2 | 1 | 619 | 1 | 629 | 0.0 | 810 |
| Msa1272340 | AT1G02205.4 | 61.157 | 605 | 230 | 2 | 20 | 619 | 21 | 625 | 0.0 | 776 |
| Msa1272340 | AT1G02190.1 | 57.760 | 625 | 251 | 6 | 1 | 615 | 1 | 622 | 0.0 | 728 |
| Msa1272340 | AT1G02190.2 | 57.760 | 625 | 247 | 7 | 1 | 615 | 1 | 618 | 0.0 | 723 |
| Msa1272340 | AT2G37700.3 | 57.512 | 619 | 255 | 3 | 1 | 615 | 1 | 615 | 0.0 | 717 |
| Msa1272340 | AT2G37700.1 | 57.351 | 619 | 247 | 4 | 1 | 615 | 1 | 606 | 0.0 | 711 |
| Msa1272340 | AT2G37700.4 | 53.473 | 619 | 243 | 4 | 1 | 615 | 1 | 578 | 0.0 | 645 |
| Msa1272340 | AT1G02205.1 | 59.382 | 453 | 179 | 2 | 172 | 619 | 8 | 460 | 0.0 | 577 |
| Msa1272340 | AT2G37700.2 | 59.244 | 476 | 189 | 2 | 1 | 475 | 1 | 472 | 0.0 | 561 |
| Msa1272340 | AT1G02205.5 | 56.614 | 378 | 159 | 2 | 247 | 619 | 8 | 385 | 1.99e-162 | 470 |
| Msa1272340 | AT5G57800.1 | 34.032 | 620 | 394 | 6 | 8 | 612 | 5 | 624 | 4.47e-121 | 373 |
Find 136 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGATTTCATGAATAATT+TGG | 0.071224 | 8_3:+5927433 | Msa1272340:CDS |
| ATATATAGCTATTGTGAAAT+TGG | 0.161382 | 8_3:+5932398 | Msa1272340:three_prime_UTR |
| CCAATTTATGATTACATCTA+TGG | 0.221817 | 8_3:+5929772 | Msa1272340:CDS |
| TCCCAATCTTAGTTGATATA+TGG | 0.227104 | 8_3:-5929896 | None:intergenic |
| TCATGTGGCCATTCACCTTT+TGG | 0.234069 | 8_3:+5929968 | Msa1272340:CDS |
| CTCGAAGTCCCAGAAGAATT+TGG | 0.242161 | 8_3:+5931334 | Msa1272340:CDS |
| AGCATCCTCACCATCATATA+TGG | 0.248897 | 8_3:-5925583 | None:intergenic |
| CTTAGTTGATATATGGATTC+AGG | 0.250871 | 8_3:-5929889 | None:intergenic |
| CTGGGAAAACCAAATTCTTC+TGG | 0.252091 | 8_3:-5931343 | None:intergenic |
| TTTGGAGGGAATTGGGAAAA+TGG | 0.256646 | 8_3:-5931595 | None:intergenic |
| TCTTCTCTTATACCCTTTCT+TGG | 0.257970 | 8_3:+5925133 | Msa1272340:five_prime_UTR |
| TGTTTAGCATTGACAAAATA+TGG | 0.263713 | 8_3:+5932219 | Msa1272340:CDS |
| GAGTGGACATTGGATAAATT+AGG | 0.267216 | 8_3:-5931670 | None:intergenic |
| GAAATTTCTTTGGAGGGAAT+TGG | 0.270137 | 8_3:-5931603 | None:intergenic |
| ACAGAGGAAATGTCTTAAAT+TGG | 0.276513 | 8_3:-5932427 | None:intergenic |
| GGATGCTACATGACCAAATT+TGG | 0.279073 | 8_3:+5925599 | Msa1272340:CDS |
| AAGATGGAGAAGACTTTCTT+AGG | 0.303702 | 8_3:-5927479 | None:intergenic |
| ATAATTTATCAACATGCTTC+AGG | 0.307718 | 8_3:+5932355 | Msa1272340:three_prime_UTR |
| GTAATTGCTGTTGTGTATAA+TGG | 0.316269 | 8_3:-5927368 | None:intergenic |
| AGGATAAACTCACAAGTTAT+TGG | 0.325113 | 8_3:-5926374 | None:intergenic |
| AACAATCTTCATCTTAAGTT+GGG | 0.326096 | 8_3:-5930989 | None:intergenic |
| CCATAGATGTAATCATAAAT+TGG | 0.332696 | 8_3:-5929772 | None:intergenic |
| AGTGGACATTGGATAAATTA+GGG | 0.340224 | 8_3:-5931669 | None:intergenic |
| ATTGATTTCATGAATAATTT+GGG | 0.340630 | 8_3:+5927434 | Msa1272340:CDS |
| ATCATGAGAATCTTCAATTA+AGG | 0.341373 | 8_3:+5931306 | Msa1272340:CDS |
| CATGCACTCATGACTCTTCT+TGG | 0.342220 | 8_3:-5932134 | None:intergenic |
| ATGAACGTCCCAACCTTCTA+AGG | 0.344095 | 8_3:-5932180 | None:intergenic |
| GGTACAAACAATGATCCTTT+TGG | 0.353128 | 8_3:-5931574 | None:intergenic |
| GAGAATGATATCTAGAATAA+AGG | 0.354501 | 8_3:-5926325 | None:intergenic |
| ATCCATATATCAACTAAGAT+TGG | 0.361402 | 8_3:+5929894 | Msa1272340:CDS |
| GGAATATTGCACGCCTTAGA+AGG | 0.363668 | 8_3:+5932167 | Msa1272340:CDS |
| ACCTTTGCAGAATTTGATCC+TGG | 0.365054 | 8_3:-5931362 | None:intergenic |
| ATATGCTCAATTTGCAATCA+TGG | 0.374703 | 8_3:+5930049 | Msa1272340:CDS |
| ATGGTGAACTATACATTAAA+AGG | 0.375204 | 8_3:+5930962 | Msa1272340:CDS |
| GAGATAAAGAGATCCAAATT+TGG | 0.381279 | 8_3:-5925612 | None:intergenic |
| CACTACATCATACACAATTT+CGG | 0.388068 | 8_3:+5929728 | Msa1272340:CDS |
| CAGTGGAGTTTCTTTACTAT+TGG | 0.392734 | 8_3:+5926276 | Msa1272340:CDS |
| ATCAGTAAGTATGCCAGGTT+TGG | 0.394606 | 8_3:-5925170 | None:intergenic |
| CTTAAGATGAAGATTGTTGA+TGG | 0.396304 | 8_3:+5930994 | Msa1272340:CDS |
| AGCAGAGTTGAGCAAAGTTA+AGG | 0.398577 | 8_3:+5930239 | Msa1272340:CDS |
| TTCCTCTGTACTAGCATTTG+TGG | 0.400135 | 8_3:+5932441 | Msa1272340:three_prime_UTR |
| CAACAATCTTCATCTTAAGT+TGG | 0.401690 | 8_3:-5930990 | None:intergenic |
| AAATTTCTTTGGAGGGAATT+GGG | 0.405095 | 8_3:-5931602 | None:intergenic |
| GCATCCATAGCATCATTTGC+TGG | 0.414049 | 8_3:+5927398 | Msa1272340:CDS |
| TGGGAAAACCAAATTCTTCT+GGG | 0.421201 | 8_3:-5931342 | None:intergenic |
| ATGAGTGCATGGCGTATTGC+TGG | 0.430094 | 8_3:+5932146 | Msa1272340:CDS |
| ATACTTAAGGATTGGAAAGA+TGG | 0.436601 | 8_3:-5927495 | None:intergenic |
| TTTGGTCTGTTCTTGTCACT+TGG | 0.441280 | 8_3:+5929986 | Msa1272340:CDS |
| AGTTAATGCTTTGTGTGAAA+GGG | 0.442145 | 8_3:+5931113 | Msa1272340:CDS |
| TGTGAATAGTCCAGAGGAAA+AGG | 0.447569 | 8_3:+5925537 | Msa1272340:CDS |
| CACACCACTAGTTCTCCATA+TGG | 0.447709 | 8_3:-5926225 | None:intergenic |
| GTGTATACATGGTATACTTA+AGG | 0.448902 | 8_3:-5927508 | None:intergenic |
| CAAATTCTTCTGGGACTTCG+AGG | 0.450017 | 8_3:-5931333 | None:intergenic |
| TCCATATATCAACTAAGATT+GGG | 0.460592 | 8_3:+5929895 | Msa1272340:CDS |
| GGAGACTTGCTCAATAGATA+TGG | 0.468212 | 8_3:+5930943 | Msa1272340:CDS |
| GACACCTCTCGGGAGATTCA+AGG | 0.470620 | 8_3:+5925201 | Msa1272340:CDS |
| AATAGACTATAATTCAATCA+AGG | 0.470808 | 8_3:-5932289 | None:intergenic |
| ATGACAATTCTTCTACATAG+TGG | 0.472384 | 8_3:+5926251 | Msa1272340:CDS |
| TAGTTAATGCTTTGTGTGAA+AGG | 0.473872 | 8_3:+5931112 | Msa1272340:CDS |
| AGATTGAGGTGAGGAGGCTA+AGG | 0.474871 | 8_3:-5929926 | None:intergenic |
| ATTGCACGCCTTAGAAGGTT+GGG | 0.477526 | 8_3:+5932172 | Msa1272340:CDS |
| CTTACTTGAACATGGAACCT+TGG | 0.484638 | 8_3:-5930078 | None:intergenic |
| TGTGTCAAATGCACCACATC+TGG | 0.484985 | 8_3:-5929856 | None:intergenic |
| TAGGCTATGTGTTCTGCAAA+TGG | 0.488094 | 8_3:-5927326 | None:intergenic |
| TATGCTCAATTTGCAATCAT+GGG | 0.489138 | 8_3:+5930050 | Msa1272340:CDS |
| GGGTATAAGAGAAGAGTCAA+AGG | 0.493599 | 8_3:-5925125 | None:intergenic |
| AATTTGCAGATATGGCTAGT+TGG | 0.497195 | 8_3:+5931517 | Msa1272340:intron |
| AACCTGGCATACTTACTGAT+TGG | 0.500706 | 8_3:+5925173 | Msa1272340:CDS |
| AGTTATTGGTTCTGTAACAA+TGG | 0.501203 | 8_3:-5926360 | None:intergenic |
| TGATGGCAGTAGCTTGGTTG+TGG | 0.501613 | 8_3:+5931011 | Msa1272340:CDS |
| GCATCCTCACCATCATATAT+GGG | 0.502244 | 8_3:-5925582 | None:intergenic |
| TATTGCACGCCTTAGAAGGT+TGG | 0.503606 | 8_3:+5932171 | Msa1272340:CDS |
| TGCAATCATGGGTTATTCCA+AGG | 0.508500 | 8_3:+5930061 | Msa1272340:CDS |
| GGCCAATCAGTAAGTATGCC+AGG | 0.509063 | 8_3:-5925175 | None:intergenic |
| AGGGGATGATTAATCTTCAA+TGG | 0.509840 | 8_3:-5932269 | None:intergenic |
| ATTGGCCATGGACACCTCTC+GGG | 0.512414 | 8_3:+5925191 | Msa1272340:CDS |
| TACATGGTATACTTAAGGAT+TGG | 0.514880 | 8_3:-5927503 | None:intergenic |
| CCCAGGATCAAATTCTGCAA+AGG | 0.521549 | 8_3:+5931361 | Msa1272340:CDS |
| CCTCATCTTCCCATATATGA+TGG | 0.523645 | 8_3:+5925573 | Msa1272340:CDS |
| GATTGGCCATGGACACCTCT+CGG | 0.524511 | 8_3:+5925190 | Msa1272340:CDS |
| TCTCGCCATCGAACCGCCAA+AGG | 0.525130 | 8_3:+5925631 | Msa1272340:CDS |
| TTTGTGTGAAAGGGGTACTA+AGG | 0.525661 | 8_3:+5931122 | Msa1272340:CDS |
| TGTGTGCTCTTTGCTATGAA+TGG | 0.527943 | 8_3:-5925505 | None:intergenic |
| CCTCAAAACTTACTTGAACA+TGG | 0.529432 | 8_3:-5930086 | None:intergenic |
| CCTTTGCAGAATTTGATCCT+GGG | 0.531383 | 8_3:-5931361 | None:intergenic |
| ATATGGATTCAGGAGTAGTA+AGG | 0.537682 | 8_3:-5929879 | None:intergenic |
| AAGTTGATCGAGAAAGCAAT+TGG | 0.540340 | 8_3:+5925692 | Msa1272340:CDS |
| AGTGACAAGAACAGACCAAA+AGG | 0.542812 | 8_3:-5929983 | None:intergenic |
| TGGAATGCTGTTAAGAACAA+TGG | 0.543327 | 8_3:-5931034 | None:intergenic |
| ATAACCAGCAAATGATGCTA+TGG | 0.543759 | 8_3:-5927402 | None:intergenic |
| TGAATGGCCACATGAAATAG+AGG | 0.548660 | 8_3:-5929960 | None:intergenic |
| ATAGACTATAATTCAATCAA+GGG | 0.551441 | 8_3:-5932288 | None:intergenic |
| CCTCACCTCAATCTTCTGAA+TGG | 0.552731 | 8_3:+5929935 | Msa1272340:CDS |
| TACTTATTTAATTTAAGACA+TGG | 0.559142 | 8_3:-5932314 | None:intergenic |
| GGCAAGCAAGTCTTCAGCAT+GGG | 0.559393 | 8_3:+5932240 | Msa1272340:CDS |
| AAGTTTAGGTCTTTCAAACC+AGG | 0.561043 | 8_3:+5930266 | Msa1272340:CDS |
| GATTGTTGATGGCAGTAGCT+TGG | 0.561867 | 8_3:+5931005 | Msa1272340:CDS |
| GGTTGGGACGTTCATGAATG+TGG | 0.564471 | 8_3:+5932188 | Msa1272340:CDS |
| AGAAGAAGGTGCACCAGATG+TGG | 0.564679 | 8_3:+5929843 | Msa1272340:CDS |
| TACTTACGATGGTGTATACA+TGG | 0.565128 | 8_3:-5927519 | None:intergenic |
| AATTCATTGAAGAAAGAAGA+AGG | 0.567139 | 8_3:+5929829 | Msa1272340:CDS |
| AGAACAGACCAAAAGGTGAA+TGG | 0.569915 | 8_3:-5929976 | None:intergenic |
| TCTTTGTGGTAGACTTGACA+AGG | 0.570755 | 8_3:+5931077 | Msa1272340:CDS |
| TGCTGTTGTGTATAATGGAA+TGG | 0.580525 | 8_3:-5927363 | None:intergenic |
| ACACCACTAGTTCTCCATAT+GGG | 0.582237 | 8_3:-5926224 | None:intergenic |
| CCATCATATATGGGAAGATG+AGG | 0.585846 | 8_3:-5925573 | None:intergenic |
| CAAGAAGAGTCATGAGTGCA+TGG | 0.587562 | 8_3:+5932135 | Msa1272340:CDS |
| ACAATCTTCATCTTAAGTTG+GGG | 0.589510 | 8_3:-5930988 | None:intergenic |
| ATCTACTAACCTCACAAGAG+TGG | 0.589871 | 8_3:-5931687 | None:intergenic |
| AATCTCCCGAGAGGTGTCCA+TGG | 0.590370 | 8_3:-5925196 | None:intergenic |
| GTTAATGCTTTGTGTGAAAG+GGG | 0.590468 | 8_3:+5931114 | Msa1272340:CDS |
| GCATACTTACTGATTGGCCA+TGG | 0.592164 | 8_3:+5925179 | Msa1272340:CDS |
| ATCCAATGTCCACTCTTGTG+AGG | 0.593116 | 8_3:+5931678 | Msa1272340:CDS |
| TTCAGAAGATTGAGGTGAGG+AGG | 0.601115 | 8_3:-5929932 | None:intergenic |
| AGGTACCATTCAGAAGATTG+AGG | 0.601316 | 8_3:-5929940 | None:intergenic |
| TGCTTCAGGTATTATCAGCA+AGG | 0.607213 | 8_3:+5932369 | Msa1272340:three_prime_UTR |
| CGCCACAAATGCTAGTACAG+AGG | 0.611522 | 8_3:-5932443 | None:intergenic |
| TCTTCTACATAGTGGACCAG+TGG | 0.617911 | 8_3:+5926259 | Msa1272340:CDS |
| GTGGACATTGGATAAATTAG+GGG | 0.619031 | 8_3:-5931668 | None:intergenic |
| TCTTCCCATATATGATGGTG+AGG | 0.622744 | 8_3:+5925578 | Msa1272340:CDS |
| ATATTATAAATAGATAGACT+TGG | 0.628761 | 8_3:+5925081 | Msa1272340:five_prime_UTR |
| AACCTCACAAGAGTGGACAT+TGG | 0.630620 | 8_3:-5931680 | None:intergenic |
| CAATAGTAAAGAAACTCCAC+TGG | 0.634669 | 8_3:-5926275 | None:intergenic |
| TAGACTATAATTCAATCAAG+GGG | 0.637835 | 8_3:-5932287 | None:intergenic |
| TTACCCATATGGAGAACTAG+TGG | 0.639339 | 8_3:+5926221 | Msa1272340:CDS |
| TGGCAAGCAAGTCTTCAGCA+TGG | 0.640804 | 8_3:+5932239 | Msa1272340:CDS |
| AATGGTACCTCTATTTCATG+TGG | 0.646040 | 8_3:+5929953 | Msa1272340:CDS |
| TGGACATTGGATAAATTAGG+GGG | 0.663725 | 8_3:-5931667 | None:intergenic |
| TTTCATTGTGAATAGTCCAG+AGG | 0.668809 | 8_3:+5925531 | Msa1272340:CDS |
| GGAAGATGAGGAAGTTACTG+AGG | 0.681674 | 8_3:-5925561 | None:intergenic |
| CATATGGAGAACTAGTGGTG+TGG | 0.687095 | 8_3:+5926226 | Msa1272340:CDS |
| AGTTGGAGATCAATGTGAGG+AGG | 0.689214 | 8_3:+5931534 | Msa1272340:CDS |
| ATTGTGTATGATGTAGTGAG+TGG | 0.695326 | 8_3:-5929723 | None:intergenic |
| CCATTCAGAAGATTGAGGTG+AGG | 0.698317 | 8_3:-5929935 | None:intergenic |
| GCTAGTTGGAGATCAATGTG+AGG | 0.727664 | 8_3:+5931531 | Msa1272340:CDS |
| GAAACCTTGAATCTCCCGAG+AGG | 0.749240 | 8_3:-5925205 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATAATTTTTATTTTTA+AGG | + | chr8_3:5930117-5930136 | Msa1272340:intron | 0.0% |
| !! | GATCAAAAAATATTAAATTA+AGG | + | chr8_3:5926088-5926107 | Msa1272340:intron | 10.0% |
| !! | TAAAATAAAAAACAAAACAT+AGG | - | chr8_3:5926397-5926416 | None:intergenic | 10.0% |
| !! | TTTAACTAATATAAGTTAAA+AGG | + | chr8_3:5927779-5927798 | Msa1272340:intron | 10.0% |
| !! | ATATTATAAATAGATAGACT+TGG | + | chr8_3:5925081-5925100 | Msa1272340:five_prime_UTR | 15.0% |
| !!! | AAGTTGGAAATTTTATAATA+GGG | - | chr8_3:5926019-5926038 | None:intergenic | 15.0% |
| !!! | TAAGTTGGAAATTTTATAAT+AGG | - | chr8_3:5926020-5926039 | None:intergenic | 15.0% |
| !! | ATTTATATATGTCTTTAAGT+TGG | - | chr8_3:5926035-5926054 | None:intergenic | 15.0% |
| !! | AAGACATATATAAATATACA+TGG | + | chr8_3:5926040-5926059 | Msa1272340:intron | 15.0% |
| !!! | AATGCATTGATATTTTATAT+TGG | + | chr8_3:5926170-5926189 | Msa1272340:CDS | 15.0% |
| !!! | ATCTTTATTTCCATATTATT+GGG | - | chr8_3:5926437-5926456 | None:intergenic | 15.0% |
| !!! | TTAATTTTGTTCATTCAATT+TGG | - | chr8_3:5926736-5926755 | None:intergenic | 15.0% |
| !! | ACATATTAATTAACAATCTA+GGG | - | chr8_3:5927224-5927243 | None:intergenic | 15.0% |
| !! | CTAATATCTTCAATTTAATT+TGG | + | chr8_3:5927285-5927304 | Msa1272340:intron | 15.0% |
| !!! | ATTGATTTCATGAATAATTT+GGG | + | chr8_3:5927434-5927453 | Msa1272340:CDS | 15.0% |
| !! | TTGTATATTCAATATCTTAA+TGG | + | chr8_3:5927578-5927597 | Msa1272340:intron | 15.0% |
| !!! | TTAATTTCATTCCTTTTAAA+TGG | + | chr8_3:5927602-5927621 | Msa1272340:intron | 15.0% |
| !!! | TAATTTCATTCCTTTTAAAT+GGG | + | chr8_3:5927603-5927622 | Msa1272340:intron | 15.0% |
| !!! | TTAATAGAGTTTTTTTTATG+TGG | + | chr8_3:5927872-5927891 | Msa1272340:intron | 15.0% |
| !!! | TAGTAATTTTGAATTAATAG+CGG | + | chr8_3:5927901-5927920 | Msa1272340:intron | 15.0% |
| !! | TTTAGTCTAAGTATTTAATA+TGG | + | chr8_3:5928292-5928311 | Msa1272340:intron | 15.0% |
| !! | TTTAATTAACCTCTAATAAA+AGG | + | chr8_3:5928785-5928804 | Msa1272340:intron | 15.0% |
| !! | TTAATTAACCTCTAATAAAA+GGG | + | chr8_3:5928786-5928805 | Msa1272340:intron | 15.0% |
| !!! | TTGATAGTAACTATTTATAT+TGG | + | chr8_3:5928852-5928871 | Msa1272340:intron | 15.0% |
| !! | TGATAGTAACTATTTATATT+GGG | + | chr8_3:5928853-5928872 | Msa1272340:intron | 15.0% |
| !!! | ATATAATTTCGTTTTTGAAA+TGG | + | chr8_3:5929411-5929430 | Msa1272340:intron | 15.0% |
| !! | AATCATAAGAAGAAAAAAAA+GGG | - | chr8_3:5929644-5929663 | None:intergenic | 15.0% |
| !! | AAATCATAAGAAGAAAAAAA+AGG | - | chr8_3:5929645-5929664 | None:intergenic | 15.0% |
| !!! | TTTTGTAGTATCTTTTTAAA+TGG | + | chr8_3:5930172-5930191 | Msa1272340:intron | 15.0% |
| !! | ATCAAACATTATAAAATTAG+AGG | - | chr8_3:5930297-5930316 | None:intergenic | 15.0% |
| !!! | TTATAATGTTTGATTTTACA+CGG | + | chr8_3:5930303-5930322 | Msa1272340:intron | 15.0% |
| !!! | TAGGTCTTTTTTTTTTTTTA+TGG | - | chr8_3:5930484-5930503 | None:intergenic | 15.0% |
| !!! | GTCAATACATATAATTTTTT+TGG | + | chr8_3:5930548-5930567 | Msa1272340:intron | 15.0% |
| !!! | TTTTTGGCTAAATTATATTT+TGG | + | chr8_3:5930564-5930583 | Msa1272340:intron | 15.0% |
| !!! | TTTGGTTCTTTAAATTATTT+TGG | + | chr8_3:5930673-5930692 | Msa1272340:intron | 15.0% |
| !!! | AAATTATTTTGGTTTCATTT+TGG | + | chr8_3:5930684-5930703 | Msa1272340:intron | 15.0% |
| !! | TAAATGAAAAAAAAGCTTAA+AGG | + | chr8_3:5930854-5930873 | Msa1272340:intron | 15.0% |
| !! | CTACTAAATTATTTAAGAAT+TGG | + | chr8_3:5931763-5931782 | Msa1272340:intron | 15.0% |
| !!! | TACTTATTTAATTTAAGACA+TGG | - | chr8_3:5932317-5932336 | None:intergenic | 15.0% |
| !! | TGTGATGATAGATTAATAAT+TGG | - | chr8_3:5925268-5925287 | None:intergenic | 20.0% |
| !! | CATAGAAATTAAATAATGCA+TGG | - | chr8_3:5925323-5925342 | None:intergenic | 20.0% |
| !! | TAGTTTCTATAACAATTCAT+AGG | - | chr8_3:5925407-5925426 | None:intergenic | 20.0% |
| !! | TAATCGTTTGTTTGAAAAAA+TGG | + | chr8_3:5925453-5925472 | Msa1272340:intron | 20.0% |
| !!! | ATATTTTTTTTTGTGTGTGT+AGG | + | chr8_3:5926129-5926148 | Msa1272340:intron | 20.0% |
| !!! | TATTTTTTTTTGTGTGTGTA+GGG | + | chr8_3:5926130-5926149 | Msa1272340:intron | 20.0% |
| !!! | TGATATTTTATATTGGTCAA+TGG | + | chr8_3:5926177-5926196 | Msa1272340:CDS | 20.0% |
| !!! | CATCTTTATTTCCATATTAT+TGG | - | chr8_3:5926438-5926457 | None:intergenic | 20.0% |
| !! | TATAGTTTAAAAAATCAGCA+TGG | + | chr8_3:5926520-5926539 | Msa1272340:intron | 20.0% |
| !!! | ATTTTAAATTTTGTTGGTAG+TGG | - | chr8_3:5926546-5926565 | None:intergenic | 20.0% |
| !!! | GTGTGAATTTTAAATTTTGT+TGG | - | chr8_3:5926552-5926571 | None:intergenic | 20.0% |
| !! | AAAAGAAAATTTAATTGTGG+TGG | - | chr8_3:5926582-5926601 | None:intergenic | 20.0% |
| !! | GAGAAAAGAAAATTTAATTG+TGG | - | chr8_3:5926585-5926604 | None:intergenic | 20.0% |
| !! | TGAATGAACAAAATTAAAGA+TGG | + | chr8_3:5926739-5926758 | Msa1272340:intron | 20.0% |
| !! | GAATGAACAAAATTAAAGAT+GGG | + | chr8_3:5926740-5926759 | Msa1272340:intron | 20.0% |
| !! | AAATAGATGTAGCAATATAA+TGG | + | chr8_3:5926879-5926898 | Msa1272340:intron | 20.0% |
| !! | AATAGATGTAGCAATATAAT+GGG | + | chr8_3:5926880-5926899 | Msa1272340:intron | 20.0% |
| !! | CACATATTAATTAACAATCT+AGG | - | chr8_3:5927225-5927244 | None:intergenic | 20.0% |
| !!! | CATTGATTTCATGAATAATT+TGG | + | chr8_3:5927433-5927452 | Msa1272340:CDS | 20.0% |
| !! | AATGTGTTAAGATTTGATAA+AGG | - | chr8_3:5927559-5927578 | None:intergenic | 20.0% |
| !!! | TACTATGACTTTATTTCATA+GGG | - | chr8_3:5928612-5928631 | None:intergenic | 20.0% |
| !! | AATTATGAAGGTAAAAAACT+AGG | + | chr8_3:5928661-5928680 | Msa1272340:intron | 20.0% |
| !!! | TTTAAAGTTTGCATCAATAA+TGG | + | chr8_3:5928697-5928716 | Msa1272340:intron | 20.0% |
| !! | ATTAAAGATGCTTACATATA+AGG | - | chr8_3:5928771-5928790 | None:intergenic | 20.0% |
| !! | TTTACGATACTTATAAGATA+AGG | - | chr8_3:5928899-5928918 | None:intergenic | 20.0% |
| !! | ACTTATAAAACCATTTGTAA+GGG | - | chr8_3:5929059-5929078 | None:intergenic | 20.0% |
| !! | TACTTATAAAACCATTTGTA+AGG | - | chr8_3:5929060-5929079 | None:intergenic | 20.0% |
| !! | AGTGGTTATATATTATAACT+CGG | - | chr8_3:5929338-5929357 | None:intergenic | 20.0% |
| !!! | TATATATATTTGTTACAGAG+TGG | - | chr8_3:5929356-5929375 | None:intergenic | 20.0% |
| !! | ACCAAATTTATTAGATAAAG+AGG | + | chr8_3:5929527-5929546 | Msa1272340:intron | 20.0% |
| !! | TCCTCTTTATCTAATAAATT+TGG | - | chr8_3:5929531-5929550 | None:intergenic | 20.0% |
| !! | TACACATATTATAGTAAGAA+AGG | - | chr8_3:5929615-5929634 | None:intergenic | 20.0% |
| !!! | AAAGTTAAGGTTTTAAGTTT+AGG | + | chr8_3:5930252-5930271 | Msa1272340:CDS | 20.0% |
| !!! | GTCTTTTTTTTTTTTTATGG+TGG | - | chr8_3:5930481-5930500 | None:intergenic | 20.0% |
| !!! | TTGGTCACTTAATTTAATTT+TGG | + | chr8_3:5930583-5930602 | Msa1272340:intron | 20.0% |
| !!! | ATCTTTTAAGTCACAAAATT+TGG | + | chr8_3:5930737-5930756 | Msa1272340:intron | 20.0% |
| !!! | AAAACTTGATTTTCTTCTTT+TGG | - | chr8_3:5931057-5931076 | None:intergenic | 20.0% |
| !!! | AAAAATAACACTAATGCTTT+TGG | + | chr8_3:5931454-5931473 | Msa1272340:intron | 20.0% |
| !! | TTTATTTGAATTTGCAGATA+TGG | + | chr8_3:5931509-5931528 | Msa1272340:intron | 20.0% |
| !! | ATAACATCACAATATATACA+AGG | - | chr8_3:5931816-5931835 | None:intergenic | 20.0% |
| !! | ATAGACTATAATTCAATCAA+GGG | - | chr8_3:5932291-5932310 | None:intergenic | 20.0% |
| !! | AATAGACTATAATTCAATCA+AGG | - | chr8_3:5932292-5932311 | None:intergenic | 20.0% |
| !! | ATATATAGCTATTGTGAAAT+TGG | + | chr8_3:5932398-5932417 | Msa1272340:three_prime_UTR | 20.0% |
| ! | CATAGGAATTAAATCATACA+TGG | - | chr8_3:5925390-5925409 | None:intergenic | 25.0% |
| ! | ACACTAAGTAATCGTAAATA+AGG | - | chr8_3:5925804-5925823 | None:intergenic | 25.0% |
| ! | ATGACTTTAAATGTGAGTTT+GGG | - | chr8_3:5925851-5925870 | None:intergenic | 25.0% |
| ! | ATATAAACCAAAGCTATGTT+TGG | - | chr8_3:5925960-5925979 | None:intergenic | 25.0% |
| !! | GAGAATGATATCTAGAATAA+AGG | - | chr8_3:5926328-5926347 | None:intergenic | 25.0% |
| ! | TTTATTTCCATATTATTGGG+AGG | - | chr8_3:5926434-5926453 | None:intergenic | 25.0% |
| ! | ATATGGAAATAAAGATGAGT+AGG | + | chr8_3:5926441-5926460 | Msa1272340:intron | 25.0% |
| !! | AATAAAAACCACTTGATAGT+TGG | - | chr8_3:5926829-5926848 | None:intergenic | 25.0% |
| ! | ATAGATGTAGCAATATAATG+GGG | + | chr8_3:5926881-5926900 | Msa1272340:intron | 25.0% |
| ! | GGAGGAGAATAAAAATTATT+GGG | + | chr8_3:5926902-5926921 | Msa1272340:intron | 25.0% |
| ! | ATGGACATATTAACAATCTA+GGG | - | chr8_3:5927116-5927135 | None:intergenic | 25.0% |
| ! | TTCATGAAATTAAAGTCACA+TGG | - | chr8_3:5927135-5927154 | None:intergenic | 25.0% |
| ! | AAAGGTTGTTTATATAGCAA+TGG | + | chr8_3:5927797-5927816 | Msa1272340:intron | 25.0% |
| !! | AATACAATCATTTGTTACCA+CGG | + | chr8_3:5928010-5928029 | Msa1272340:intron | 25.0% |
| !! | ATTTTTGTCATGAGTTAAGT+TGG | + | chr8_3:5928235-5928254 | Msa1272340:intron | 25.0% |
| !! | TTTTTGTCATGAGTTAAGTT+GGG | + | chr8_3:5928236-5928255 | Msa1272340:intron | 25.0% |
| ! | ACTTAATGTGAGAAATTCTT+AGG | - | chr8_3:5928547-5928566 | None:intergenic | 25.0% |
| ! | AGAATTTCTCACATTAAGTT+AGG | + | chr8_3:5928548-5928567 | Msa1272340:intron | 25.0% |
| !! | GTACTATGACTTTATTTCAT+AGG | - | chr8_3:5928613-5928632 | None:intergenic | 25.0% |
| ! | ATCCAACAGATTAATTATGA+AGG | + | chr8_3:5928649-5928668 | Msa1272340:intron | 25.0% |
| ! | TACCTTCATAATTAATCTGT+TGG | - | chr8_3:5928654-5928673 | None:intergenic | 25.0% |
| !!! | ATAAAAGGGTGTTTAGATAT+AGG | + | chr8_3:5928800-5928819 | Msa1272340:intron | 25.0% |
| !!! | TAAAAGGGTGTTTAGATATA+GGG | + | chr8_3:5928801-5928820 | Msa1272340:intron | 25.0% |
| !! | TAAGTATCGTAAATATGAGT+TGG | + | chr8_3:5928906-5928925 | Msa1272340:intron | 25.0% |
| ! | CTTATAAAACCATTTGTAAG+GGG | - | chr8_3:5929058-5929077 | None:intergenic | 25.0% |
| ! | TAAAGAGGATAATTAGACAA+TGG | + | chr8_3:5929542-5929561 | Msa1272340:intron | 25.0% |
| !!! | TGGAGTACTTTTTTTATGTT+AGG | + | chr8_3:5929562-5929581 | Msa1272340:intron | 25.0% |
| ! | CTAAATATATGATATGTGAC+AGG | + | chr8_3:5929698-5929717 | Msa1272340:intron | 25.0% |
| ! | CCATAGATGTAATCATAAAT+TGG | - | chr8_3:5929775-5929794 | None:intergenic | 25.0% |
| ! | CCAATTTATGATTACATCTA+TGG | + | chr8_3:5929772-5929791 | Msa1272340:CDS | 25.0% |
| ! | AATTCATTGAAGAAAGAAGA+AGG | + | chr8_3:5929829-5929848 | Msa1272340:CDS | 25.0% |
| ! | ATCCATATATCAACTAAGAT+TGG | + | chr8_3:5929894-5929913 | Msa1272340:CDS | 25.0% |
| ! | TCCATATATCAACTAAGATT+GGG | + | chr8_3:5929895-5929914 | Msa1272340:CDS | 25.0% |
| ! | GACACAAAAAATAAACTCAA+GGG | - | chr8_3:5930621-5930640 | None:intergenic | 25.0% |
| ! | TGACACAAAAAATAAACTCA+AGG | - | chr8_3:5930622-5930641 | None:intergenic | 25.0% |
| ! | ATATATGTTCAATGAATGCA+GGG | + | chr8_3:5930922-5930941 | Msa1272340:intron | 25.0% |
| ! | ATGGTGAACTATACATTAAA+AGG | + | chr8_3:5930962-5930981 | Msa1272340:CDS | 25.0% |
| ! | AACAATCTTCATCTTAAGTT+GGG | - | chr8_3:5930992-5931011 | None:intergenic | 25.0% |
| !! | GAAAATCAAGTTTTTCTTTG+TGG | + | chr8_3:5931063-5931082 | Msa1272340:CDS | 25.0% |
| !!! | TTTTTTTCCTTCTTTCTTTC+AGG | + | chr8_3:5931262-5931281 | Msa1272340:intron | 25.0% |
| ! | ATCATGAGAATCTTCAATTA+AGG | + | chr8_3:5931306-5931325 | Msa1272340:CDS | 25.0% |
| !! | CAATCTTTTCGAAATTTCTT+TGG | - | chr8_3:5931616-5931635 | None:intergenic | 25.0% |
| ! | TTACTCTCTTAGAAATCAAA+AGG | + | chr8_3:5931729-5931748 | Msa1272340:intron | 25.0% |
| !! | TTTTGTATATGCAACAGAAT+TGG | + | chr8_3:5932108-5932127 | Msa1272340:intron | 25.0% |
| !!! | TGTTTAGCATTGACAAAATA+TGG | + | chr8_3:5932219-5932238 | Msa1272340:CDS | 25.0% |
| ! | TAGACTATAATTCAATCAAG+GGG | - | chr8_3:5932290-5932309 | None:intergenic | 25.0% |
| ! | ATAATTTATCAACATGCTTC+AGG | + | chr8_3:5932355-5932374 | Msa1272340:three_prime_UTR | 25.0% |
| !! | AGTGATCGTTTTCAAATTAT+TGG | + | chr8_3:5932512-5932531 | Msa1272340:three_prime_UTR | 25.0% |
| GAGATAAAGAGATCCAAATT+TGG | - | chr8_3:5925615-5925634 | None:intergenic | 30.0% | |
| !! | TAATCGTAAATAAGGTGTTG+TGG | - | chr8_3:5925796-5925815 | None:intergenic | 30.0% |
| CATGACTTTAAATGTGAGTT+TGG | - | chr8_3:5925852-5925871 | None:intergenic | 30.0% | |
| ! | TAACTTCATGCTTTTAGTAG+TGG | + | chr8_3:5925894-5925913 | Msa1272340:intron | 30.0% |
| ! | GTTTGGATAATGTTTTTCCA+GGG | - | chr8_3:5925943-5925962 | None:intergenic | 30.0% |
| ! | TGTTTGGATAATGTTTTTCC+AGG | - | chr8_3:5925944-5925963 | None:intergenic | 30.0% |
| ACATTATCCAAACATAGCTT+TGG | + | chr8_3:5925950-5925969 | Msa1272340:intron | 30.0% | |
| ! | ATTTTATATTGGTCAATGGC+TGG | + | chr8_3:5926181-5926200 | Msa1272340:CDS | 30.0% |
| AGTCTCAAAAATTACCCATA+TGG | + | chr8_3:5926210-5926229 | Msa1272340:CDS | 30.0% | |
| ATGACAATTCTTCTACATAG+TGG | + | chr8_3:5926251-5926270 | Msa1272340:CDS | 30.0% | |
| !! | AGTTATTGGTTCTGTAACAA+TGG | - | chr8_3:5926363-5926382 | None:intergenic | 30.0% |
| AGGATAAACTCACAAGTTAT+TGG | - | chr8_3:5926377-5926396 | None:intergenic | 30.0% | |
| ATGTAGTGTAAAGTTGTTCA+CGG | + | chr8_3:5926496-5926515 | Msa1272340:intron | 30.0% | |
| !! | TCTAGTTCATGTACATGTTT+TGG | - | chr8_3:5926671-5926690 | None:intergenic | 30.0% |
| GGGAGGAGAATAAAAATTAT+TGG | + | chr8_3:5926901-5926920 | Msa1272340:intron | 30.0% | |
| GAATAAAAATTATTGGGCTG+AGG | + | chr8_3:5926908-5926927 | Msa1272340:intron | 30.0% | |
| CATGGACATATTAACAATCT+AGG | - | chr8_3:5927117-5927136 | None:intergenic | 30.0% | |
| AATGGCAAATAGCAAAAAGT+AGG | - | chr8_3:5927348-5927367 | None:intergenic | 30.0% | |
| ! | GTAATTGCTGTTGTGTATAA+TGG | - | chr8_3:5927371-5927390 | None:intergenic | 30.0% |
| ATACTTAAGGATTGGAAAGA+TGG | - | chr8_3:5927498-5927517 | None:intergenic | 30.0% | |
| TACATGGTATACTTAAGGAT+TGG | - | chr8_3:5927506-5927525 | None:intergenic | 30.0% | |
| GTGTATACATGGTATACTTA+AGG | - | chr8_3:5927511-5927530 | None:intergenic | 30.0% | |
| !! | TTGATAAAGGTGTTAAGAGT+TGG | - | chr8_3:5927546-5927565 | None:intergenic | 30.0% |
| TTCAAATGCTCCCATTTAAA+AGG | - | chr8_3:5927616-5927635 | None:intergenic | 30.0% | |
| GCTCATGTATAAAATGTTTG+AGG | - | chr8_3:5928121-5928140 | None:intergenic | 30.0% | |
| TGTGACCAAAGAAAATTTCT+AGG | + | chr8_3:5928511-5928530 | Msa1272340:intron | 30.0% | |
| TAATGTGAGAAATTCTTAGG+TGG | - | chr8_3:5928544-5928563 | None:intergenic | 30.0% | |
| AAGATGCTTACATATAAGGA+CGG | - | chr8_3:5928767-5928786 | None:intergenic | 30.0% | |
| ! | TCTAAACACCCTTTTATTAG+AGG | - | chr8_3:5928797-5928816 | None:intergenic | 30.0% |
| CACTACATCATACACAATTT+CGG | + | chr8_3:5929728-5929747 | Msa1272340:CDS | 30.0% | |
| ! | CTTAGTTGATATATGGATTC+AGG | - | chr8_3:5929892-5929911 | None:intergenic | 30.0% |
| ! | TCCCAATCTTAGTTGATATA+TGG | - | chr8_3:5929899-5929918 | None:intergenic | 30.0% |
| ATATGCTCAATTTGCAATCA+TGG | + | chr8_3:5930049-5930068 | Msa1272340:CDS | 30.0% | |
| ACGATGCATAAAATATGCAA+AGG | + | chr8_3:5930440-5930459 | Msa1272340:intron | 30.0% | |
| ATAAAATATGCAAAGGTCCA+GGG | + | chr8_3:5930447-5930466 | Msa1272340:intron | 30.0% | |
| TGTCTAGCATTATGAGTTAA+GGG | - | chr8_3:5930652-5930671 | None:intergenic | 30.0% | |
| TTGTCTAGCATTATGAGTTA+AGG | - | chr8_3:5930653-5930672 | None:intergenic | 30.0% | |
| ACTCATAATGCTAGACAATT+TGG | + | chr8_3:5930655-5930674 | Msa1272340:intron | 30.0% | |
| ACACTTAGTCCTTCAAATAA+GGG | + | chr8_3:5930760-5930779 | Msa1272340:intron | 30.0% | |
| ! | TATTTCGATCCCTTATTTGA+AGG | - | chr8_3:5930772-5930791 | None:intergenic | 30.0% |
| CATATATGTTCAATGAATGC+AGG | + | chr8_3:5930921-5930940 | Msa1272340:intron | 30.0% | |
| ! | ACAATCTTCATCTTAAGTTG+GGG | - | chr8_3:5930991-5931010 | None:intergenic | 30.0% |
| CAACAATCTTCATCTTAAGT+TGG | - | chr8_3:5930993-5931012 | None:intergenic | 30.0% | |
| CTTAAGATGAAGATTGTTGA+TGG | + | chr8_3:5930994-5931013 | Msa1272340:CDS | 30.0% | |
| TAGTTAATGCTTTGTGTGAA+AGG | + | chr8_3:5931112-5931131 | Msa1272340:CDS | 30.0% | |
| AGTTAATGCTTTGTGTGAAA+GGG | + | chr8_3:5931113-5931132 | Msa1272340:CDS | 30.0% | |
| !! | GAACAAAAAAAAGCACCAAA+AGG | + | chr8_3:5931559-5931578 | Msa1272340:CDS | 30.0% |
| ! | AAATTTCTTTGGAGGGAATT+GGG | - | chr8_3:5931605-5931624 | None:intergenic | 30.0% |
| ! | CTTTTCGAAATTTCTTTGGA+GGG | - | chr8_3:5931612-5931631 | None:intergenic | 30.0% |
| ! | TCTTTTCGAAATTTCTTTGG+AGG | - | chr8_3:5931613-5931632 | None:intergenic | 30.0% |
| AGTGGACATTGGATAAATTA+GGG | - | chr8_3:5931672-5931691 | None:intergenic | 30.0% | |
| ! | TGATTTCTAAGAGAGTAAAC+TGG | - | chr8_3:5931727-5931746 | None:intergenic | 30.0% |
| ATCATTGTCTTGATCATAGT+CGG | + | chr8_3:5931838-5931857 | Msa1272340:intron | 30.0% | |
| !! | TGTTTTTGATACTGTAGTCA+TGG | - | chr8_3:5931921-5931940 | None:intergenic | 30.0% |
| ACAGAGGAAATGTCTTAAAT+TGG | - | chr8_3:5932430-5932449 | None:intergenic | 30.0% | |
| TCTTCTCTTATACCCTTTCT+TGG | + | chr8_3:5925133-5925152 | Msa1272340:five_prime_UTR | 35.0% | |
| ACCCTTTCTTGGCATAAAAA+TGG | + | chr8_3:5925144-5925163 | Msa1272340:exon | 35.0% | |
| !!! | GCCATTTTTATGCCAAGAAA+GGG | - | chr8_3:5925148-5925167 | None:intergenic | 35.0% |
| AAATGGATGATACAATGCAG+TGG | + | chr8_3:5925470-5925489 | Msa1272340:intron | 35.0% | |
| AATGGATGATACAATGCAGT+GGG | + | chr8_3:5925471-5925490 | Msa1272340:intron | 35.0% | |
| TTTCATTGTGAATAGTCCAG+AGG | + | chr8_3:5925531-5925550 | Msa1272340:CDS | 35.0% | |
| !!! | GATTCTGTTTTTTCCTTTGG+CGG | - | chr8_3:5925647-5925666 | None:intergenic | 35.0% |
| !!! | GACGATTCTGTTTTTTCCTT+TGG | - | chr8_3:5925650-5925669 | None:intergenic | 35.0% |
| AAAAAACAGAATCGTCGACA+AGG | + | chr8_3:5925654-5925673 | Msa1272340:CDS | 35.0% | |
| ! | AAGTTGATCGAGAAAGCAAT+TGG | + | chr8_3:5925692-5925711 | Msa1272340:CDS | 35.0% |
| ACGATTACTTAGTGTCTGTT+TGG | + | chr8_3:5925809-5925828 | Msa1272340:intron | 35.0% | |
| !!! | ATGGGTAATTTTTGAGACTC+TGG | - | chr8_3:5926209-5926228 | None:intergenic | 35.0% |
| CAATAGTAAAGAAACTCCAC+TGG | - | chr8_3:5926278-5926297 | None:intergenic | 35.0% | |
| CAGTGGAGTTTCTTTACTAT+TGG | + | chr8_3:5926276-5926295 | Msa1272340:CDS | 35.0% | |
| TTTACCACCTCCCAATAATA+TGG | + | chr8_3:5926424-5926443 | Msa1272340:intron | 35.0% | |
| ATTTCCATATTATTGGGAGG+TGG | - | chr8_3:5926431-5926450 | None:intergenic | 35.0% | |
| GAGTAGGTGAGAAATTAATG+TGG | + | chr8_3:5926457-5926476 | Msa1272340:intron | 35.0% | |
| ACCTATTACCAACTATCAAG+TGG | + | chr8_3:5926818-5926837 | Msa1272340:intron | 35.0% | |
| !! | ACCACTTGATAGTTGGTAAT+AGG | - | chr8_3:5926822-5926841 | None:intergenic | 35.0% |
| ! | TGCTGTTGTGTATAATGGAA+TGG | - | chr8_3:5927366-5927385 | None:intergenic | 35.0% |
| ATAACCAGCAAATGATGCTA+TGG | - | chr8_3:5927405-5927424 | None:intergenic | 35.0% | |
| AAGATGGAGAAGACTTTCTT+AGG | - | chr8_3:5927482-5927501 | None:intergenic | 35.0% | |
| TACTTACGATGGTGTATACA+TGG | - | chr8_3:5927522-5927541 | None:intergenic | 35.0% | |
| TAAGAGTTGGATACTTACGA+TGG | - | chr8_3:5927533-5927552 | None:intergenic | 35.0% | |
| CGCTCGTGTGTTAATAAATT+TGG | - | chr8_3:5927708-5927727 | None:intergenic | 35.0% | |
| ! | TAATTATAAAGCATTCGCCG+TGG | - | chr8_3:5928030-5928049 | None:intergenic | 35.0% |
| TGTGACCAAACCAAATTTCT+TGG | - | chr8_3:5928410-5928429 | None:intergenic | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | - | chr8_3:5928471-5928490 | None:intergenic | 35.0% | |
| TCTTCTCTCTCTTCTTTCTT+TGG | + | chr8_3:5928487-5928506 | Msa1272340:intron | 35.0% | |
| TAACTCCTTGTATCTAGTTG+GGG | - | chr8_3:5928740-5928759 | None:intergenic | 35.0% | |
| GTAACTCCTTGTATCTAGTT+GGG | - | chr8_3:5928741-5928760 | None:intergenic | 35.0% | |
| GACATTATTCCCCTTACAAA+TGG | + | chr8_3:5929046-5929065 | Msa1272340:intron | 35.0% | |
| ATTGTGTATGATGTAGTGAG+TGG | - | chr8_3:5929726-5929745 | None:intergenic | 35.0% | |
| ATATGGATTCAGGAGTAGTA+AGG | - | chr8_3:5929882-5929901 | None:intergenic | 35.0% | |
| AATGGTACCTCTATTTCATG+TGG | + | chr8_3:5929953-5929972 | Msa1272340:CDS | 35.0% | |
| !!! | GTTCTTGTCACTTGGTTTTA+TGG | + | chr8_3:5929994-5930013 | Msa1272340:CDS | 35.0% |
| CCTCAAAACTTACTTGAACA+TGG | - | chr8_3:5930089-5930108 | None:intergenic | 35.0% | |
| ! | CCATGTTCAAGTAAGTTTTG+AGG | + | chr8_3:5930086-5930105 | Msa1272340:intron | 35.0% |
| AAGTTTAGGTCTTTCAAACC+AGG | + | chr8_3:5930266-5930285 | Msa1272340:CDS | 35.0% | |
| ATAAAATTAGAGGACTCACC+TGG | - | chr8_3:5930287-5930306 | None:intergenic | 35.0% | |
| CATAAAATATGCAAAGGTCC+AGG | + | chr8_3:5930446-5930465 | Msa1272340:intron | 35.0% | |
| TTCCATCGAATTTCATCTGT+AGG | - | chr8_3:5930503-5930522 | None:intergenic | 35.0% | |
| GACACTTAGTCCTTCAAATA+AGG | + | chr8_3:5930759-5930778 | Msa1272340:intron | 35.0% | |
| TGGAATGCTGTTAAGAACAA+TGG | - | chr8_3:5931037-5931056 | None:intergenic | 35.0% | |
| GTTAATGCTTTGTGTGAAAG+GGG | + | chr8_3:5931114-5931133 | Msa1272340:CDS | 35.0% | |
| GTTGTAACCTGAAAGAAAGA+AGG | - | chr8_3:5931272-5931291 | None:intergenic | 35.0% | |
| TGGGAAAACCAAATTCTTCT+GGG | - | chr8_3:5931345-5931364 | None:intergenic | 35.0% | |
| AATTTGCAGATATGGCTAGT+TGG | + | chr8_3:5931517-5931536 | Msa1272340:intron | 35.0% | |
| ! | GGTACAAACAATGATCCTTT+TGG | - | chr8_3:5931577-5931596 | None:intergenic | 35.0% |
| ! | GAAATTTCTTTGGAGGGAAT+TGG | - | chr8_3:5931606-5931625 | None:intergenic | 35.0% |
| TAAATTAGGGGGAGTTATCA+TGG | - | chr8_3:5931659-5931678 | None:intergenic | 35.0% | |
| TGGACATTGGATAAATTAGG+GGG | - | chr8_3:5931670-5931689 | None:intergenic | 35.0% | |
| GTGGACATTGGATAAATTAG+GGG | - | chr8_3:5931671-5931690 | None:intergenic | 35.0% | |
| GAGTGGACATTGGATAAATT+AGG | - | chr8_3:5931673-5931692 | None:intergenic | 35.0% | |
| AGGGGATGATTAATCTTCAA+TGG | - | chr8_3:5932272-5932291 | None:intergenic | 35.0% | |
| GGGTATAAGAGAAGAGTCAA+AGG | - | chr8_3:5925128-5925147 | None:intergenic | 40.0% | |
| !!! | CGCCATTTTTATGCCAAGAA+AGG | - | chr8_3:5925149-5925168 | None:intergenic | 40.0% |
| ATAAAAATGGCGTCCAAACC+TGG | + | chr8_3:5925157-5925176 | Msa1272340:exon | 40.0% | |
| ATCAGTAAGTATGCCAGGTT+TGG | - | chr8_3:5925173-5925192 | None:intergenic | 40.0% | |
| AACCTGGCATACTTACTGAT+TGG | + | chr8_3:5925173-5925192 | Msa1272340:CDS | 40.0% | |
| ! | TGTGTGCTCTTTGCTATGAA+TGG | - | chr8_3:5925508-5925527 | None:intergenic | 40.0% |
| TGTGAATAGTCCAGAGGAAA+AGG | + | chr8_3:5925537-5925556 | Msa1272340:CDS | 40.0% | |
| CCATCATATATGGGAAGATG+AGG | - | chr8_3:5925576-5925595 | None:intergenic | 40.0% | |
| CCTCATCTTCCCATATATGA+TGG | + | chr8_3:5925573-5925592 | Msa1272340:CDS | 40.0% | |
| ! | TCTTCCCATATATGATGGTG+AGG | + | chr8_3:5925578-5925597 | Msa1272340:CDS | 40.0% |
| GCATCCTCACCATCATATAT+GGG | - | chr8_3:5925585-5925604 | None:intergenic | 40.0% | |
| AGCATCCTCACCATCATATA+TGG | - | chr8_3:5925586-5925605 | None:intergenic | 40.0% | |
| GGATGCTACATGACCAAATT+TGG | + | chr8_3:5925599-5925618 | Msa1272340:CDS | 40.0% | |
| ! | CTTCATGCTTTTAGTAGTGG+AGG | + | chr8_3:5925897-5925916 | Msa1272340:intron | 40.0% |
| ATTGAGATACGATATTGCCC+TGG | + | chr8_3:5925923-5925942 | Msa1272340:intron | 40.0% | |
| TTACCCATATGGAGAACTAG+TGG | + | chr8_3:5926221-5926240 | Msa1272340:CDS | 40.0% | |
| ! | ACACCACTAGTTCTCCATAT+GGG | - | chr8_3:5926227-5926246 | None:intergenic | 40.0% |
| ! | GATGTAGCAATATAATGGGG+AGG | + | chr8_3:5926884-5926903 | Msa1272340:intron | 40.0% |
| TAGGCTATGTGTTCTGCAAA+TGG | - | chr8_3:5927329-5927348 | None:intergenic | 40.0% | |
| AGTAACACAGCTAAAACTCG+CGG | + | chr8_3:5927734-5927753 | Msa1272340:intron | 40.0% | |
| AGACACGCTTCGAATAAGAT+TGG | + | chr8_3:5927849-5927868 | Msa1272340:intron | 40.0% | |
| TAGCGGAAGTCATCTCATTA+AGG | + | chr8_3:5927918-5927937 | Msa1272340:intron | 40.0% | |
| TGAACCAGGACCAAGAAATT+TGG | + | chr8_3:5928397-5928416 | Msa1272340:intron | 40.0% | |
| CAAACCAAATTTCTTGGTCC+TGG | - | chr8_3:5928404-5928423 | None:intergenic | 40.0% | |
| CAGGACCAAGAAATTTGGTT+TGG | + | chr8_3:5928402-5928421 | Msa1272340:intron | 40.0% | |
| ! | CAGGGCCTAGAAATTTTCTT+TGG | - | chr8_3:5928519-5928538 | None:intergenic | 40.0% |
| ! | CAAAGAAAATTTCTAGGCCC+TGG | + | chr8_3:5928517-5928536 | Msa1272340:intron | 40.0% |
| AGAAATTCTTAGGTGGTCCA+GGG | - | chr8_3:5928537-5928556 | None:intergenic | 40.0% | |
| TCACATTAAGTTAGGCAGCT+TGG | + | chr8_3:5928556-5928575 | Msa1272340:intron | 40.0% | |
| ! | ACTACCAAAGTACTCTAGGT+TGG | - | chr8_3:5928586-5928605 | None:intergenic | 40.0% |
| ! | AACCTAGAGTACTTTGGTAG+TGG | + | chr8_3:5928585-5928604 | Msa1272340:intron | 40.0% |
| TATCTAGTTGGGGAACGATT+TGG | - | chr8_3:5928730-5928749 | None:intergenic | 40.0% | |
| GGTAACTCCTTGTATCTAGT+TGG | - | chr8_3:5928742-5928761 | None:intergenic | 40.0% | |
| TGCTTACATATAAGGACGGA+TGG | - | chr8_3:5928763-5928782 | None:intergenic | 40.0% | |
| ! | AGGGTGTTTAGATATAGGGA+CGG | + | chr8_3:5928805-5928824 | Msa1272340:intron | 40.0% |
| ! | AGATAAGGAGTGCATCTCTT+AGG | - | chr8_3:5928884-5928903 | None:intergenic | 40.0% |
| TGCATCAAATCTAGTCGTGT+TGG | + | chr8_3:5928989-5929008 | Msa1272340:intron | 40.0% | |
| AGGTACCATTCAGAAGATTG+AGG | - | chr8_3:5929943-5929962 | None:intergenic | 40.0% | |
| TGAATGGCCACATGAAATAG+AGG | - | chr8_3:5929963-5929982 | None:intergenic | 40.0% | |
| AGAACAGACCAAAAGGTGAA+TGG | - | chr8_3:5929979-5929998 | None:intergenic | 40.0% | |
| AGTGACAAGAACAGACCAAA+AGG | - | chr8_3:5929986-5930005 | None:intergenic | 40.0% | |
| TTTGGTCTGTTCTTGTCACT+TGG | + | chr8_3:5929986-5930005 | Msa1272340:CDS | 40.0% | |
| CTTACTTGAACATGGAACCT+TGG | - | chr8_3:5930081-5930100 | None:intergenic | 40.0% | |
| AGCAGAGTTGAGCAAAGTTA+AGG | + | chr8_3:5930239-5930258 | Msa1272340:CDS | 40.0% | |
| ! | TGAGCTTAGTTCAGTTGGTA+GGG | + | chr8_3:5930417-5930436 | Msa1272340:intron | 40.0% |
| GACCTACAGATGAAATTCGA+TGG | + | chr8_3:5930498-5930517 | Msa1272340:intron | 40.0% | |
| ! | GGAGACTTGCTCAATAGATA+TGG | + | chr8_3:5930943-5930962 | Msa1272340:CDS | 40.0% |
| TCTTTGTGGTAGACTTGACA+AGG | + | chr8_3:5931077-5931096 | Msa1272340:CDS | 40.0% | |
| !! | TTTGTGTGAAAGGGGTACTA+AGG | + | chr8_3:5931122-5931141 | Msa1272340:CDS | 40.0% |
| CTGGGAAAACCAAATTCTTC+TGG | - | chr8_3:5931346-5931365 | None:intergenic | 40.0% | |
| !!! | CAGAAGAATTTGGTTTTCCC+AGG | + | chr8_3:5931344-5931363 | Msa1272340:CDS | 40.0% |
| CCTTTGCAGAATTTGATCCT+GGG | - | chr8_3:5931364-5931383 | None:intergenic | 40.0% | |
| ACCTTTGCAGAATTTGATCC+TGG | - | chr8_3:5931365-5931384 | None:intergenic | 40.0% | |
| TTTGGAGGGAATTGGGAAAA+TGG | - | chr8_3:5931598-5931617 | None:intergenic | 40.0% | |
| ATCTACTAACCTCACAAGAG+TGG | - | chr8_3:5931690-5931709 | None:intergenic | 40.0% | |
| TGCTTCAGGTATTATCAGCA+AGG | + | chr8_3:5932369-5932388 | Msa1272340:three_prime_UTR | 40.0% | |
| TTCCTCTGTACTAGCATTTG+TGG | + | chr8_3:5932441-5932460 | Msa1272340:three_prime_UTR | 40.0% | |
| ! | GCATACTTACTGATTGGCCA+TGG | + | chr8_3:5925179-5925198 | Msa1272340:CDS | 45.0% |
| ! | TTACTGAGGTCCTTTTCCTC+TGG | - | chr8_3:5925550-5925569 | None:intergenic | 45.0% |
| GGAAGATGAGGAAGTTACTG+AGG | - | chr8_3:5925564-5925583 | None:intergenic | 45.0% | |
| ! | TTTTTCCTTTGGCGGTTCGA+TGG | - | chr8_3:5925639-5925658 | None:intergenic | 45.0% |
| ! | CACACCACTAGTTCTCCATA+TGG | - | chr8_3:5926228-5926247 | None:intergenic | 45.0% |
| CATATGGAGAACTAGTGGTG+TGG | + | chr8_3:5926226-5926245 | Msa1272340:CDS | 45.0% | |
| !! | TCTTCTACATAGTGGACCAG+TGG | + | chr8_3:5926259-5926278 | Msa1272340:CDS | 45.0% |
| GCATCCATAGCATCATTTGC+TGG | + | chr8_3:5927398-5927417 | Msa1272340:CDS | 45.0% | |
| GTCCCATTTCTCTTGAACCA+CGG | + | chr8_3:5927940-5927959 | Msa1272340:intron | 45.0% | |
| TGCCGTGGTTCAAGAGAAAT+GGG | - | chr8_3:5927945-5927964 | None:intergenic | 45.0% | |
| ATGCCGTGGTTCAAGAGAAA+TGG | - | chr8_3:5927946-5927965 | None:intergenic | 45.0% | |
| GAGAAACTCTTCTGTGAACC+AGG | + | chr8_3:5928383-5928402 | Msa1272340:intron | 45.0% | |
| GAGAAATTCTTAGGTGGTCC+AGG | - | chr8_3:5928538-5928557 | None:intergenic | 45.0% | |
| ! | GACCACTACCAAAGTACTCT+AGG | - | chr8_3:5928590-5928609 | None:intergenic | 45.0% |
| TCGTTCCCCAACTAGATACA+AGG | + | chr8_3:5928732-5928751 | Msa1272340:intron | 45.0% | |
| GTGTTTAGATATAGGGACGG+AGG | + | chr8_3:5928808-5928827 | Msa1272340:intron | 45.0% | |
| TGTGTCAAATGCACCACATC+TGG | - | chr8_3:5929859-5929878 | None:intergenic | 45.0% | |
| TTCAGAAGATTGAGGTGAGG+AGG | - | chr8_3:5929935-5929954 | None:intergenic | 45.0% | |
| CCATTCAGAAGATTGAGGTG+AGG | - | chr8_3:5929938-5929957 | None:intergenic | 45.0% | |
| CCTCACCTCAATCTTCTGAA+TGG | + | chr8_3:5929935-5929954 | Msa1272340:CDS | 45.0% | |
| ! | TCATGTGGCCATTCACCTTT+TGG | + | chr8_3:5929968-5929987 | Msa1272340:CDS | 45.0% |
| GTGAGCTTAGTTCAGTTGGT+AGG | + | chr8_3:5930416-5930435 | Msa1272340:intron | 45.0% | |
| ! | TTATGGTGGAGTTTGAACCC+TGG | - | chr8_3:5930467-5930486 | None:intergenic | 45.0% |
| !! | GATTGTTGATGGCAGTAGCT+TGG | + | chr8_3:5931005-5931024 | Msa1272340:CDS | 45.0% |
| !! | GTGAAAGGGGTACTAAGGTA+TGG | + | chr8_3:5931127-5931146 | Msa1272340:intron | 45.0% |
| !! | CAAATTCTTCTGGGACTTCG+AGG | - | chr8_3:5931336-5931355 | None:intergenic | 45.0% |
| CTCGAAGTCCCAGAAGAATT+TGG | + | chr8_3:5931334-5931353 | Msa1272340:CDS | 45.0% | |
| CCCAGGATCAAATTCTGCAA+AGG | + | chr8_3:5931361-5931380 | Msa1272340:CDS | 45.0% | |
| GCTAGTTGGAGATCAATGTG+AGG | + | chr8_3:5931531-5931550 | Msa1272340:CDS | 45.0% | |
| AGTTGGAGATCAATGTGAGG+AGG | + | chr8_3:5931534-5931553 | Msa1272340:CDS | 45.0% | |
| ATCCAATGTCCACTCTTGTG+AGG | + | chr8_3:5931678-5931697 | Msa1272340:CDS | 45.0% | |
| AACCTCACAAGAGTGGACAT+TGG | - | chr8_3:5931683-5931702 | None:intergenic | 45.0% | |
| AGTCGTGAGTCGTGACATTA+AGG | - | chr8_3:5931950-5931969 | None:intergenic | 45.0% | |
| CATGCACTCATGACTCTTCT+TGG | - | chr8_3:5932137-5932156 | None:intergenic | 45.0% | |
| CAAGAAGAGTCATGAGTGCA+TGG | + | chr8_3:5932135-5932154 | Msa1272340:CDS | 45.0% | |
| GGAATATTGCACGCCTTAGA+AGG | + | chr8_3:5932167-5932186 | Msa1272340:CDS | 45.0% | |
| TATTGCACGCCTTAGAAGGT+TGG | + | chr8_3:5932171-5932190 | Msa1272340:CDS | 45.0% | |
| ATTGCACGCCTTAGAAGGTT+GGG | + | chr8_3:5932172-5932191 | Msa1272340:CDS | 45.0% | |
| ATGAACGTCCCAACCTTCTA+AGG | - | chr8_3:5932183-5932202 | None:intergenic | 45.0% | |
| !!! | TAGTTTTTTTTTTTTTTTAA+GGG | - | chr8_3:5926991-5927010 | None:intergenic | 5.0% |
| !!! | ATAGTTTTTTTTTTTTTTTA+AGG | - | chr8_3:5926992-5927011 | None:intergenic | 5.0% |
| !! | AATAAGATAAAAATTTAATT+CGG | + | chr8_3:5928049-5928068 | Msa1272340:intron | 5.0% |
| !! | TTATAATGAATTAAAATTAA+CGG | - | chr8_3:5928157-5928176 | None:intergenic | 5.0% |
| !! | TAAAATGTTAAATTAAATAA+AGG | - | chr8_3:5929496-5929515 | None:intergenic | 5.0% |
| !! | AAAATATTATAACATTTAAA+TGG | - | chr8_3:5930370-5930389 | None:intergenic | 5.0% |
| GGCCAATCAGTAAGTATGCC+AGG | - | chr8_3:5925178-5925197 | None:intergenic | 50.0% | |
| GAAACCTTGAATCTCCCGAG+AGG | - | chr8_3:5925208-5925227 | None:intergenic | 50.0% | |
| CCATGTGATTGAGTATGCCG+TGG | - | chr8_3:5927960-5927979 | None:intergenic | 50.0% | |
| CCACGGCATACTCAATCACA+TGG | + | chr8_3:5927957-5927976 | Msa1272340:intron | 50.0% | |
| ! | CCAAAGTACTCTAGGTTGGC+AGG | - | chr8_3:5928582-5928601 | None:intergenic | 50.0% |
| ! | CCTGCCAACCTAGAGTACTT+TGG | + | chr8_3:5928579-5928598 | Msa1272340:intron | 50.0% |
| ! | ATCTAGTCGTGTTGGTCACG+AGG | + | chr8_3:5928997-5929016 | Msa1272340:intron | 50.0% |
| ! | TCTAGTCGTGTTGGTCACGA+GGG | + | chr8_3:5928998-5929017 | Msa1272340:intron | 50.0% |
| ! | AGAAGAAGGTGCACCAGATG+TGG | + | chr8_3:5929843-5929862 | Msa1272340:CDS | 50.0% |
| AGATTGAGGTGAGGAGGCTA+AGG | - | chr8_3:5929929-5929948 | None:intergenic | 50.0% | |
| CCAACTGAACTAAGCTCACG+AGG | - | chr8_3:5930415-5930434 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAGTTCAGT+TGG | + | chr8_3:5930412-5930431 | Msa1272340:intron | 50.0% | |
| TGATGGCAGTAGCTTGGTTG+TGG | + | chr8_3:5931011-5931030 | Msa1272340:CDS | 50.0% | |
| TTAGGGGGAGTTATCATGGC+TGG | - | chr8_3:5931655-5931674 | None:intergenic | 50.0% | |
| ATGAGTGCATGGCGTATTGC+TGG | + | chr8_3:5932146-5932165 | Msa1272340:CDS | 50.0% | |
| GGTTGGGACGTTCATGAATG+TGG | + | chr8_3:5932188-5932207 | Msa1272340:CDS | 50.0% | |
| TGGCAAGCAAGTCTTCAGCA+TGG | + | chr8_3:5932239-5932258 | Msa1272340:CDS | 50.0% | |
| GGCAAGCAAGTCTTCAGCAT+GGG | + | chr8_3:5932240-5932259 | Msa1272340:CDS | 50.0% | |
| CGCCACAAATGCTAGTACAG+AGG | - | chr8_3:5932446-5932465 | None:intergenic | 50.0% | |
| ! | GATTGGCCATGGACACCTCT+CGG | + | chr8_3:5925190-5925209 | Msa1272340:CDS | 55.0% |
| ATTGGCCATGGACACCTCTC+GGG | + | chr8_3:5925191-5925210 | Msa1272340:CDS | 55.0% | |
| !! | AATCTCCCGAGAGGTGTCCA+TGG | - | chr8_3:5925199-5925218 | None:intergenic | 55.0% |
| GACACCTCTCGGGAGATTCA+AGG | + | chr8_3:5925201-5925220 | Msa1272340:CDS | 55.0% | |
| AAGCTCACGAGGACGTCTGT+AGG | - | chr8_3:5930404-5930423 | None:intergenic | 55.0% | |
| TCTCGCCATCGAACCGCCAA+AGG | + | chr8_3:5925631-5925650 | Msa1272340:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 5925073 | 5932548 | 5925073 | ID=Msa1272340;Name=Msa1272340 |
| chr8_3 | mRNA | 5925073 | 5932548 | 5925073 | ID=Msa1272340-mRNA-1;Parent=Msa1272340;Name=Msa1272340-mRNA-1;_AED=0.09;_eAED=0.09;_QI=90|1|1|1|1|1|10|250|622 |
| chr8_3 | exon | 5925073 | 5925222 | 5925073 | ID=Msa1272340-mRNA-1:exon:2137;Parent=Msa1272340-mRNA-1 |
| chr8_3 | exon | 5925490 | 5925713 | 5925490 | ID=Msa1272340-mRNA-1:exon:2138;Parent=Msa1272340-mRNA-1 |
| chr8_3 | exon | 5926151 | 5926383 | 5926151 | ID=Msa1272340-mRNA-1:exon:2139;Parent=Msa1272340-mRNA-1 |
| chr8_3 | exon | 5927315 | 5927534 | 5927315 | ID=Msa1272340-mRNA-1:exon:2140;Parent=Msa1272340-mRNA-1 |
| chr8_3 | exon | 5929720 | 5930095 | 5929720 | ID=Msa1272340-mRNA-1:exon:2141;Parent=Msa1272340-mRNA-1 |
| chr8_3 | exon | 5930180 | 5930287 | 5930180 | ID=Msa1272340-mRNA-1:exon:2142;Parent=Msa1272340-mRNA-1 |
| chr8_3 | exon | 5930943 | 5931143 | 5930943 | ID=Msa1272340-mRNA-1:exon:2143;Parent=Msa1272340-mRNA-1 |
| chr8_3 | exon | 5931284 | 5931382 | 5931284 | ID=Msa1272340-mRNA-1:exon:2144;Parent=Msa1272340-mRNA-1 |
| chr8_3 | exon | 5931526 | 5931699 | 5931526 | ID=Msa1272340-mRNA-1:exon:2145;Parent=Msa1272340-mRNA-1 |
| chr8_3 | exon | 5932125 | 5932548 | 5932125 | ID=Msa1272340-mRNA-1:exon:2146;Parent=Msa1272340-mRNA-1 |
| chr8_3 | five_prime_UTR | 5925073 | 5925162 | 5925073 | ID=Msa1272340-mRNA-1:five_prime_utr;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5925163 | 5925222 | 5925163 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5925490 | 5925713 | 5925490 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5926151 | 5926383 | 5926151 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5927315 | 5927534 | 5927315 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5929720 | 5930095 | 5929720 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5930180 | 5930287 | 5930180 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5930943 | 5931143 | 5930943 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5931284 | 5931382 | 5931284 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5931526 | 5931699 | 5931526 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | CDS | 5932125 | 5932298 | 5932125 | ID=Msa1272340-mRNA-1:cds;Parent=Msa1272340-mRNA-1 |
| chr8_3 | three_prime_UTR | 5932299 | 5932548 | 5932299 | ID=Msa1272340-mRNA-1:three_prime_utr;Parent=Msa1272340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
