Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0938820 | sp|Q5XVC4|MDP60_ARATH | 50.734 | 477 | 180 | 12 | 11 | 474 | 32 | 466 | 2.11e-131 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0938820 | G7KMP3 | 94.274 | 489 | 22 | 3 | 1 | 488 | 1 | 484 | 0.0 | 848 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0938820 | 0.824925 | 6.196305e-54 | -8.615850e-47 |
| Msa0030370 | Msa0938820 | 0.805862 | 1.087417e-49 | -8.615850e-47 |
| Msa0048510 | Msa0938820 | 0.806307 | 8.767930e-50 | -8.615850e-47 |
| Msa0081570 | Msa0938820 | 0.800583 | 1.346258e-48 | -8.615850e-47 |
| Msa0090400 | Msa0938820 | 0.808301 | 3.313186e-50 | -8.615850e-47 |
| Msa0094780 | Msa0938820 | 0.822208 | 2.678123e-53 | -8.615850e-47 |
| Msa0624900 | Msa0938820 | 0.810252 | 1.264527e-50 | -8.615850e-47 |
| Msa0658640 | Msa0938820 | 0.810280 | 1.246494e-50 | -8.615850e-47 |
| Msa0658880 | Msa0938820 | 0.803126 | 4.045297e-49 | -8.615850e-47 |
| Msa0666700 | Msa0938820 | 0.808526 | 2.965405e-50 | -8.615850e-47 |
| Msa0735780 | Msa0938820 | 0.829932 | 3.902146e-55 | -8.615850e-47 |
| Msa0761670 | Msa0938820 | 0.808361 | 3.217043e-50 | -8.615850e-47 |
| Msa0777750 | Msa0938820 | 0.810676 | 1.024081e-50 | -8.615850e-47 |
| Msa0795870 | Msa0938820 | 0.860143 | 2.536254e-63 | -8.615850e-47 |
| Msa0824450 | Msa0938820 | 0.812770 | 3.587192e-51 | -8.615850e-47 |
| Msa0833650 | Msa0938820 | 0.853472 | 2.336768e-61 | -8.615850e-47 |
| Msa0173730 | Msa0938820 | 0.814702 | 1.346707e-51 | -8.615850e-47 |
| Msa0213030 | Msa0938820 | 0.800964 | 1.125763e-48 | -8.615850e-47 |
| Msa0225860 | Msa0938820 | 0.817944 | 2.535637e-52 | -8.615850e-47 |
| Msa0242590 | Msa0938820 | 0.808746 | 2.661494e-50 | -8.615850e-47 |
| Msa0298470 | Msa0938820 | 0.831824 | 1.340545e-55 | -8.615850e-47 |
| Msa0330380 | Msa0938820 | 0.814423 | 1.552787e-51 | -8.615850e-47 |
| Msa0340500 | Msa0938820 | 0.812731 | 3.657109e-51 | -8.615850e-47 |
| Msa0483100 | Msa0938820 | 0.809325 | 2.000637e-50 | -8.615850e-47 |
| Msa0534720 | Msa0938820 | 0.807849 | 4.133962e-50 | -8.615850e-47 |
| Msa0567170 | Msa0938820 | 0.800962 | 1.126799e-48 | -8.615850e-47 |
| Msa0580370 | Msa0938820 | 0.859250 | 4.709154e-63 | -8.615850e-47 |
| Msa0873730 | Msa0938820 | 0.903320 | 3.918134e-79 | -8.615850e-47 |
| Msa0938820 | Msa0938870 | 0.818810 | 1.613634e-52 | -8.615850e-47 |
| Msa0938820 | Msa0944700 | 0.804065 | 2.583228e-49 | -8.615850e-47 |
| Msa0938820 | Msa1081390 | 0.801884 | 7.291974e-49 | -8.615850e-47 |
| Msa0938820 | Msa1132840 | 0.858970 | 5.713234e-63 | -8.615850e-47 |
| Msa0938820 | Msa1162590 | 0.809728 | 1.639657e-50 | -8.615850e-47 |
| Msa0938820 | Msa1200890 | 0.808388 | 3.173500e-50 | -8.615850e-47 |
| Msa0938820 | Msa1208950 | 0.826891 | 2.115184e-54 | -8.615850e-47 |
| Msa0938820 | Msa1215870 | 0.803497 | 3.388663e-49 | -8.615850e-47 |
| Msa0938820 | Msa1226520 | 0.815386 | 9.492197e-52 | -8.615850e-47 |
| Msa0938820 | Msa1307630 | 0.801109 | 1.051302e-48 | -8.615850e-47 |
| Msa0938820 | Msa1320670 | 0.809021 | 2.324495e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0938820 | MtrunA17_Chr6g0454541 | 94.274 | 489 | 22 | 3 | 1 | 488 | 1 | 484 | 0.0 | 848 |
| Msa0938820 | MtrunA17_Chr7g0218721 | 48.893 | 497 | 175 | 14 | 8 | 488 | 23 | 456 | 3.00e-115 | 347 |
| Msa0938820 | MtrunA17_Chr3g0109961 | 47.009 | 117 | 60 | 1 | 370 | 486 | 49 | 163 | 3.70e-27 | 107 |
| Msa0938820 | MtrunA17_Chr4g0051971 | 45.299 | 117 | 62 | 1 | 370 | 486 | 9 | 123 | 3.27e-25 | 100 |
| Msa0938820 | MtrunA17_Chr4g0040361 | 26.415 | 212 | 96 | 4 | 314 | 466 | 518 | 728 | 4.25e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0938820 | AT5G15510.1 | 51.600 | 500 | 180 | 14 | 11 | 488 | 31 | 490 | 4.35e-143 | 420 |
| Msa0938820 | AT3G01015.1 | 50.734 | 477 | 180 | 12 | 11 | 474 | 32 | 466 | 2.15e-132 | 392 |
| Msa0938820 | AT5G15510.4 | 51.836 | 463 | 161 | 14 | 11 | 451 | 31 | 453 | 6.48e-128 | 380 |
| Msa0938820 | AT5G15510.3 | 51.836 | 463 | 161 | 14 | 11 | 451 | 31 | 453 | 6.48e-128 | 380 |
| Msa0938820 | AT5G15510.2 | 51.836 | 463 | 161 | 14 | 11 | 451 | 31 | 453 | 3.91e-127 | 380 |
| Msa0938820 | AT5G37478.4 | 54.639 | 97 | 44 | 0 | 368 | 464 | 36 | 132 | 3.58e-28 | 110 |
| Msa0938820 | AT5G37478.1 | 54.639 | 97 | 44 | 0 | 368 | 464 | 56 | 152 | 5.55e-28 | 110 |
| Msa0938820 | AT5G37478.2 | 54.639 | 97 | 44 | 0 | 368 | 464 | 23 | 119 | 1.17e-27 | 108 |
| Msa0938820 | AT1G03780.3 | 26.190 | 210 | 96 | 4 | 316 | 466 | 522 | 731 | 4.12e-13 | 72.4 |
| Msa0938820 | AT1G03780.2 | 26.190 | 210 | 96 | 4 | 316 | 466 | 522 | 731 | 4.40e-13 | 72.4 |
Find 108 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGTTACTTAGTATAAAA+AGG | 0.150829 | 6_3:+10630627 | Msa0938820:CDS |
| GTTCACATTCTCAGTTTCTA+AGG | 0.217493 | 6_3:-10630075 | None:intergenic |
| AGGAATAGTGTACCTGAAAA+TGG | 0.245271 | 6_3:+10630575 | Msa0938820:CDS |
| TAAGGCATTGGCTGAGCTTT+AGG | 0.247802 | 6_3:-10633119 | None:intergenic |
| GAACAATCTGAAGTTGTTTC+TGG | 0.251180 | 6_3:+10630758 | Msa0938820:CDS |
| AGAAATATTCAATTTGTATA+TGG | 0.262930 | 6_3:+10633666 | Msa0938820:three_prime_UTR |
| AATTTGATTATTCATGATAT+TGG | 0.263242 | 6_3:+10630440 | Msa0938820:CDS |
| ATGTGAAACTTTGGTTCTTT+TGG | 0.287997 | 6_3:-10633509 | None:intergenic |
| TCACATAAGCAATTGACTTC+TGG | 0.297270 | 6_3:-10633641 | None:intergenic |
| AGAGAATGATAAGAAGAATA+AGG | 0.305347 | 6_3:+10630676 | Msa0938820:CDS |
| GACATCTGAACAACTTGGTT+TGG | 0.311378 | 6_3:+10630817 | Msa0938820:CDS |
| ATGAATGGTCTGTCAAAATA+AGG | 0.316056 | 6_3:-10633137 | None:intergenic |
| GGTGATGAAATGGGCATTAC+CGG | 0.324243 | 6_3:+10630697 | Msa0938820:CDS |
| TCAAGCACTTGATCTTCTTA+TGG | 0.325673 | 6_3:-10633538 | None:intergenic |
| TGGCTGAAGAGGAAGAAATT+AGG | 0.328083 | 6_3:+10633075 | Msa0938820:CDS |
| GGGTTTCAGCTACTTCTTCT+TGG | 0.338322 | 6_3:+10630846 | Msa0938820:CDS |
| TCTAAGGGTTTCTTCTTCTC+TGG | 0.345090 | 6_3:-10630059 | None:intergenic |
| AGAAGAATAAGGTGATGAAA+TGG | 0.354081 | 6_3:+10630687 | Msa0938820:CDS |
| CATGGAAGACCTTGTGCAAT+AGG | 0.357245 | 6_3:-10631640 | None:intergenic |
| ACCTCAGTCCTTAGCTTGAA+TGG | 0.358943 | 6_3:-10631444 | None:intergenic |
| TCATCATCACCATCCTTAAC+AGG | 0.359348 | 6_3:-10630737 | None:intergenic |
| CTTCAGAAATCGTTGAATAA+AGG | 0.377474 | 6_3:+10630125 | Msa0938820:CDS |
| AAAGGGAGAAAGAGAAGAAT+GGG | 0.388957 | 6_3:+10630645 | Msa0938820:CDS |
| GGTTTCAGCTACTTCTTCTT+GGG | 0.396182 | 6_3:+10630847 | Msa0938820:CDS |
| TTGGAATCATCTAGTACTAT+TGG | 0.398723 | 6_3:+10631372 | Msa0938820:CDS |
| AGAGGAAGAAAATGAAGAAA+AGG | 0.403515 | 6_3:+10630499 | Msa0938820:CDS |
| CTATGAAGCTTCACGTCAAT+AGG | 0.408886 | 6_3:-10632710 | None:intergenic |
| GAAGAATAAGGTGATGAAAT+GGG | 0.424705 | 6_3:+10630688 | Msa0938820:CDS |
| TCTTCTTGGGATTGTGGCAG+TGG | 0.425689 | 6_3:+10630860 | Msa0938820:CDS |
| TTTCGCCGCAGAAGAGAATT+CGG | 0.429940 | 6_3:+10630177 | Msa0938820:CDS |
| GTGTGTAGCAGGAATTCTTC+TGG | 0.431259 | 6_3:+10631023 | Msa0938820:CDS |
| GCAACTTCAACAGCCTGTTA+AGG | 0.431444 | 6_3:+10630724 | Msa0938820:CDS |
| AACAACTTGGTTTGGATCAA+AGG | 0.432734 | 6_3:+10630825 | Msa0938820:CDS |
| GAAAGAGAAGAATGGGGAAG+AGG | 0.438587 | 6_3:+10630652 | Msa0938820:CDS |
| AGAACAACAGAAAATAGAAA+TGG | 0.439997 | 6_3:+10632878 | Msa0938820:CDS |
| TCGCGCTGAATTTGATCATC+AGG | 0.442139 | 6_3:+10632751 | Msa0938820:CDS |
| GGCTTTGTGCTTTCTTTCAC+CGG | 0.443138 | 6_3:-10632689 | None:intergenic |
| GAGGAAGAAAATGAAGAAAA+GGG | 0.449465 | 6_3:+10630500 | Msa0938820:CDS |
| TTGATCCACCATTACCTCCT+TGG | 0.450059 | 6_3:-10633161 | None:intergenic |
| AGGAAGAAATTAGGAGATTG+AGG | 0.451722 | 6_3:+10633084 | Msa0938820:CDS |
| GGCTGTTGAAGTTGCAATCC+CGG | 0.458973 | 6_3:-10630716 | None:intergenic |
| CATTACCTCCTTGGAATGAA+TGG | 0.461240 | 6_3:-10633152 | None:intergenic |
| TGTTGTGCAGTGTGTGTAGC+AGG | 0.461841 | 6_3:+10631012 | Msa0938820:intron |
| AGAAATGGAAAGACAACAAA+AGG | 0.463028 | 6_3:+10632893 | Msa0938820:CDS |
| GGAATAGTGTACCTGAAAAT+GGG | 0.466587 | 6_3:+10630576 | Msa0938820:CDS |
| GTTGTAGTTCAATGGTGAAA+AGG | 0.470110 | 6_3:+10630525 | Msa0938820:CDS |
| GCTACTTCTTCTTGGGATTG+TGG | 0.470448 | 6_3:+10630854 | Msa0938820:CDS |
| ACAACTTGGTTTGGATCAAA+GGG | 0.474466 | 6_3:+10630826 | Msa0938820:CDS |
| GGGATTGTGGCAGTGGAAGA+AGG | 0.477674 | 6_3:+10630867 | Msa0938820:CDS |
| AAAAGGGAGAAAGAGAAGAA+TGG | 0.480035 | 6_3:+10630644 | Msa0938820:CDS |
| TCCCTTACAGTTGGCTGAAG+AGG | 0.485828 | 6_3:+10633064 | Msa0938820:intron |
| CTCTCAAATTCCGATACGCT+TGG | 0.487598 | 6_3:-10630304 | None:intergenic |
| AAAGGGTAGTTGTAGTTCAA+TGG | 0.496624 | 6_3:+10630517 | Msa0938820:CDS |
| GAAGCTTCATAGTGATTTGA+GGG | 0.499102 | 6_3:+10632721 | Msa0938820:CDS |
| GTACTATTGGAGGAAGGAGG+TGG | 0.500694 | 6_3:+10631385 | Msa0938820:CDS |
| GAAGAAAATGATGAAGAGAA+AGG | 0.500726 | 6_3:+10630386 | Msa0938820:CDS |
| AGAAGAACAGTTGATGAAGA+AGG | 0.503039 | 6_3:+10631579 | Msa0938820:CDS |
| TGAAGCTTCATAGTGATTTG+AGG | 0.503817 | 6_3:+10632720 | Msa0938820:CDS |
| ATATTCAATTTGTATATGGA+TGG | 0.506227 | 6_3:+10633670 | Msa0938820:three_prime_UTR |
| AGCAGATGGAGTGGGGCAAA+AGG | 0.507686 | 6_3:+10633781 | Msa0938820:three_prime_UTR |
| AGAAATTAGGAGATTGAGGA+AGG | 0.508198 | 6_3:+10633088 | Msa0938820:CDS |
| CTATTGCACAAGGTCTTCCA+TGG | 0.513189 | 6_3:+10631641 | Msa0938820:CDS |
| AAGGAGGAGAGAGAGAGTAA+TGG | 0.523139 | 6_3:+10630544 | Msa0938820:CDS |
| AATTCGGCAAAGAAAGTTTG+TGG | 0.527699 | 6_3:+10630193 | Msa0938820:CDS |
| AAATGGGAAAGTGATGCATT+TGG | 0.528141 | 6_3:+10630592 | Msa0938820:CDS |
| TTATTCAACGATTTCTGAAG+TGG | 0.528946 | 6_3:-10630122 | None:intergenic |
| AGAGAGTAATGGAAGAAGCA+AGG | 0.532326 | 6_3:+10630555 | Msa0938820:CDS |
| TGGTGAGGTATGTGAAACTT+TGG | 0.533377 | 6_3:-10633518 | None:intergenic |
| TTCACATTCTCAGTTTCTAA+GGG | 0.533557 | 6_3:-10630074 | None:intergenic |
| TTGACAGACCATTCATTCCA+AGG | 0.533595 | 6_3:+10633144 | Msa0938820:CDS |
| TGATCAAAGTCCTAAGAAAA+CGG | 0.535593 | 6_3:+10630235 | Msa0938820:CDS |
| AGGTGAAAATGTTCTTGAAG+AGG | 0.546375 | 6_3:+10630406 | Msa0938820:CDS |
| GTCAGAAACCATTCAAGCTA+AGG | 0.548312 | 6_3:+10631436 | Msa0938820:CDS |
| ACAGTGCTTGCTAAAACCTC+CGG | 0.548685 | 6_3:+10632670 | Msa0938820:intron |
| ATTTGAGAGAATCACAAGAA+GGG | 0.551972 | 6_3:+10630318 | Msa0938820:CDS |
| GTTTCTGGTTGTGATGATGA+TGG | 0.553660 | 6_3:+10630773 | Msa0938820:CDS |
| GTAGTTCAATGGTGAAAAGG+AGG | 0.555502 | 6_3:+10630528 | Msa0938820:CDS |
| CTTTGCCGAATTCTCTTCTG+CGG | 0.560334 | 6_3:-10630182 | None:intergenic |
| CACTTGATCTTCTTATGGTG+AGG | 0.566706 | 6_3:-10633533 | None:intergenic |
| AGTGTGTTTGCCAAGCGTAT+CGG | 0.567233 | 6_3:+10630294 | Msa0938820:CDS |
| GAATCATCTAGTACTATTGG+AGG | 0.568710 | 6_3:+10631375 | Msa0938820:CDS |
| TAGACATAAGCAGATGGAGT+GGG | 0.571052 | 6_3:+10633773 | Msa0938820:three_prime_UTR |
| TCAGGTTCATCAATAGTCCA+TGG | 0.571822 | 6_3:-10631658 | None:intergenic |
| GTGATGAAATGGGCATTACC+GGG | 0.577552 | 6_3:+10630698 | Msa0938820:CDS |
| GGTCTGTCAAAATAAGGCAT+TGG | 0.582294 | 6_3:-10633131 | None:intergenic |
| TATTCAACGATTTCTGAAGT+GGG | 0.582434 | 6_3:-10630121 | None:intergenic |
| CTTCAACAGCCTGTTAAGGA+TGG | 0.585836 | 6_3:+10630728 | Msa0938820:CDS |
| AATTTGAGAGAATCACAAGA+AGG | 0.588022 | 6_3:+10630317 | Msa0938820:CDS |
| AAGGGAGAAAGAGAAGAATG+GGG | 0.589475 | 6_3:+10630646 | Msa0938820:CDS |
| CGATGAAGAAGAAGGCGTAG+AGG | 0.596905 | 6_3:+10630481 | Msa0938820:CDS |
| ACTTTGACATCTGAACAACT+TGG | 0.600270 | 6_3:+10630812 | Msa0938820:CDS |
| CTGCTATAGACATAAGCAGA+TGG | 0.605285 | 6_3:+10633767 | Msa0938820:three_prime_UTR |
| TGTGGAGAGAACAGCGATGG+TGG | 0.606384 | 6_3:+10630269 | Msa0938820:CDS |
| TGCTTCAACTGAGAATTCAG+AGG | 0.607787 | 6_3:+10633590 | Msa0938820:exon |
| CATCTAGTACTATTGGAGGA+AGG | 0.619078 | 6_3:+10631379 | Msa0938820:CDS |
| TTTGTGCTTTCTTTCACCGG+AGG | 0.623077 | 6_3:-10632686 | None:intergenic |
| GAAAGTGATGCATTTGGTGA+AGG | 0.636336 | 6_3:+10630598 | Msa0938820:CDS |
| CAATTGATAGAATTGATCAA+AGG | 0.648223 | 6_3:-10633725 | None:intergenic |
| CTAGTACTATTGGAGGAAGG+AGG | 0.649542 | 6_3:+10631382 | Msa0938820:CDS |
| ACCATTCAAGCTAAGGACTG+AGG | 0.658037 | 6_3:+10631443 | Msa0938820:CDS |
| ATGAGAATTCCTATTGCACA+AGG | 0.660872 | 6_3:+10631631 | Msa0938820:CDS |
| ATGGACTATTGATGAACCTG+AGG | 0.663121 | 6_3:+10631660 | Msa0938820:CDS |
| AGACATAAGCAGATGGAGTG+GGG | 0.669257 | 6_3:+10633774 | Msa0938820:three_prime_UTR |
| ATAGACATAAGCAGATGGAG+TGG | 0.696142 | 6_3:+10633772 | Msa0938820:three_prime_UTR |
| TGTAGCAGGAATTCTTCTGG+TGG | 0.701277 | 6_3:+10631026 | Msa0938820:CDS |
| ACAGACCATTCATTCCAAGG+AGG | 0.710502 | 6_3:+10633147 | Msa0938820:CDS |
| ATAATGCTATTGCAGCAAAG+GGG | 0.739050 | 6_3:+10631547 | Msa0938820:intron |
| AAATGTGGAGAGAACAGCGA+TGG | 0.759190 | 6_3:+10630266 | Msa0938820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGATTATTCATGATAT+TGG | + | chr6_3:10630440-10630459 | Msa0938820:CDS | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+TGG | + | chr6_3:10631182-10631201 | Msa0938820:intron | 15.0% |
| !!! | TAATTGATGATACAAATAAT+CGG | + | chr6_3:10631466-10631485 | Msa0938820:intron | 15.0% |
| !!! | ATTATTATATTTTGGTTTGA+AGG | + | chr6_3:10633465-10633484 | Msa0938820:intron | 15.0% |
| !! | AGAAATATTCAATTTGTATA+TGG | + | chr6_3:10633666-10633685 | Msa0938820:three_prime_UTR | 15.0% |
| !! | TTCGATTAGAAAAATCATTA+GGG | - | chr6_3:10630100-10630119 | None:intergenic | 20.0% |
| !! | TTTCGATTAGAAAAATCATT+AGG | - | chr6_3:10630101-10630120 | None:intergenic | 20.0% |
| !!! | GAAAAAGAGAATTTTTTTGA+TGG | + | chr6_3:10630347-10630366 | Msa0938820:CDS | 20.0% |
| !! | ACTATAATACTAATGAAGAT+TGG | + | chr6_3:10631283-10631302 | Msa0938820:intron | 20.0% |
| !! | GATTCAATTCACTATTAATA+AGG | + | chr6_3:10631311-10631330 | Msa0938820:intron | 20.0% |
| !! | TAAAATCTCATAGTCAAATT+TGG | + | chr6_3:10631732-10631751 | Msa0938820:intron | 20.0% |
| !! | ATAATGTGTTAACTAAGAAT+AGG | + | chr6_3:10631778-10631797 | Msa0938820:intron | 20.0% |
| !! | ATAAAAAATCTTTACACTGA+CGG | + | chr6_3:10632039-10632058 | Msa0938820:intron | 20.0% |
| !! | TTTGATAAAGAAAAACATTG+AGG | - | chr6_3:10632443-10632462 | None:intergenic | 20.0% |
| !! | TAATAATGAGACAAGAATAA+TGG | - | chr6_3:10633452-10633471 | None:intergenic | 20.0% |
| !!! | CTTGTCTCATTATTATATTT+TGG | + | chr6_3:10633457-10633476 | Msa0938820:intron | 20.0% |
| !! | ATATTCAATTTGTATATGGA+TGG | + | chr6_3:10633670-10633689 | Msa0938820:three_prime_UTR | 20.0% |
| !!! | AATGAACTTACTTTTCTTTT+TGG | + | chr6_3:10633826-10633845 | Msa0938820:three_prime_UTR | 20.0% |
| ! | AGAGGTTACTTAGTATAAAA+AGG | + | chr6_3:10630627-10630646 | Msa0938820:CDS | 25.0% |
| ! | GAGGTTACTTAGTATAAAAA+GGG | + | chr6_3:10630628-10630647 | Msa0938820:CDS | 25.0% |
| ! | AGAGAATGATAAGAAGAATA+AGG | + | chr6_3:10630676-10630695 | Msa0938820:CDS | 25.0% |
| !!! | AAAATGCAACAAGCTTTAAA+GGG | - | chr6_3:10630923-10630942 | None:intergenic | 25.0% |
| !! | TAAAATGCAACAAGCTTTAA+AGG | - | chr6_3:10630924-10630943 | None:intergenic | 25.0% |
| !!! | GAGTTTGATTTGATACATTT+TGG | + | chr6_3:10630947-10630966 | Msa0938820:intron | 25.0% |
| ! | TACTAAAAATCTATGAAGCA+GGG | - | chr6_3:10631261-10631280 | None:intergenic | 25.0% |
| !!! | AATTTGTGTTTTTTAGAGCT+TGG | + | chr6_3:10631353-10631372 | Msa0938820:intron | 25.0% |
| !!! | AGTTTCTTCAAATTTTTCAG+TGG | + | chr6_3:10631502-10631521 | Msa0938820:intron | 25.0% |
| !!! | AAATTTTTCAGTGGCTATAT+TGG | + | chr6_3:10631511-10631530 | Msa0938820:intron | 25.0% |
| ! | ATGCTAGGATATTAGATATA+AGG | - | chr6_3:10632147-10632166 | None:intergenic | 25.0% |
| ! | GATTAACATAACCTTGTTAA+GGG | - | chr6_3:10632297-10632316 | None:intergenic | 25.0% |
| ! | AGATTAACATAACCTTGTTA+AGG | - | chr6_3:10632298-10632317 | None:intergenic | 25.0% |
| ! | CAAATCTATGATAATTCTGT+TGG | + | chr6_3:10632459-10632478 | Msa0938820:intron | 25.0% |
| ! | TGAATCTATGATAATTCTGT+TGG | + | chr6_3:10632608-10632627 | Msa0938820:intron | 25.0% |
| ! | TCATGATGTGTAAAACTAAA+GGG | - | chr6_3:10632803-10632822 | None:intergenic | 25.0% |
| ! | TTCATGATGTGTAAAACTAA+AGG | - | chr6_3:10632804-10632823 | None:intergenic | 25.0% |
| ! | AGAACAACAGAAAATAGAAA+TGG | + | chr6_3:10632878-10632897 | Msa0938820:CDS | 25.0% |
| ! | AAACATGGTATTTCAAAATC+AGG | - | chr6_3:10632958-10632977 | None:intergenic | 25.0% |
| !!! | GTATGTTTTTAACAGCTTTT+TGG | + | chr6_3:10633223-10633242 | Msa0938820:intron | 25.0% |
| ! | TCTCAAAATGACAAAATCAA+TGG | + | chr6_3:10633313-10633332 | Msa0938820:intron | 25.0% |
| !!! | GTCATTGATTTGAAATCAAT+TGG | - | chr6_3:10633382-10633401 | None:intergenic | 25.0% |
| ! | ATACACACTTTAATTGATCT+CGG | - | chr6_3:10633404-10633423 | None:intergenic | 25.0% |
| ! | CAATTGATAGAATTGATCAA+AGG | - | chr6_3:10633728-10633747 | None:intergenic | 25.0% |
| TTCACATTCTCAGTTTCTAA+GGG | - | chr6_3:10630077-10630096 | None:intergenic | 30.0% | |
| !! | TATTCAACGATTTCTGAAGT+GGG | - | chr6_3:10630124-10630143 | None:intergenic | 30.0% |
| ! | TTATTCAACGATTTCTGAAG+TGG | - | chr6_3:10630125-10630144 | None:intergenic | 30.0% |
| CTTCAGAAATCGTTGAATAA+AGG | + | chr6_3:10630125-10630144 | Msa0938820:CDS | 30.0% | |
| TGATCAAAGTCCTAAGAAAA+CGG | + | chr6_3:10630235-10630254 | Msa0938820:CDS | 30.0% | |
| ! | TTACACAAAACCGTTTTCTT+AGG | - | chr6_3:10630248-10630267 | None:intergenic | 30.0% |
| !! | AAAACGGTTTTGTGTAAATG+TGG | + | chr6_3:10630251-10630270 | Msa0938820:CDS | 30.0% |
| AATTTGAGAGAATCACAAGA+AGG | + | chr6_3:10630317-10630336 | Msa0938820:CDS | 30.0% | |
| ATTTGAGAGAATCACAAGAA+GGG | + | chr6_3:10630318-10630337 | Msa0938820:CDS | 30.0% | |
| GAAGAAAATGATGAAGAGAA+AGG | + | chr6_3:10630386-10630405 | Msa0938820:CDS | 30.0% | |
| AGAAAAATCGATGAAGAAGA+AGG | + | chr6_3:10630473-10630492 | Msa0938820:CDS | 30.0% | |
| AGAGGAAGAAAATGAAGAAA+AGG | + | chr6_3:10630499-10630518 | Msa0938820:CDS | 30.0% | |
| GAGGAAGAAAATGAAGAAAA+GGG | + | chr6_3:10630500-10630519 | Msa0938820:CDS | 30.0% | |
| AGAAGAATAAGGTGATGAAA+TGG | + | chr6_3:10630687-10630706 | Msa0938820:CDS | 30.0% | |
| GAAGAATAAGGTGATGAAAT+GGG | + | chr6_3:10630688-10630707 | Msa0938820:CDS | 30.0% | |
| CTACTAAAAATCTATGAAGC+AGG | - | chr6_3:10631262-10631281 | None:intergenic | 30.0% | |
| TTGGAATCATCTAGTACTAT+TGG | + | chr6_3:10631372-10631391 | Msa0938820:CDS | 30.0% | |
| TATAATGCTATTGCAGCAAA+GGG | + | chr6_3:10631546-10631565 | Msa0938820:intron | 30.0% | |
| AGCATATGCACTTTAAACTA+AGG | - | chr6_3:10631709-10631728 | None:intergenic | 30.0% | |
| !! | TCATCACTGATTTAAGCTAT+TGG | - | chr6_3:10631876-10631895 | None:intergenic | 30.0% |
| ! | TCTAAAGTCATACACATGAT+GGG | - | chr6_3:10631961-10631980 | None:intergenic | 30.0% |
| !! | TTCTAAAGTCATACACATGA+TGG | - | chr6_3:10631962-10631981 | None:intergenic | 30.0% |
| CAAACGTTTCTAATACTTGA+CGG | + | chr6_3:10631998-10632017 | Msa0938820:intron | 30.0% | |
| GGAGATAACAATTTCCAATT+AGG | + | chr6_3:10632178-10632197 | Msa0938820:intron | 30.0% | |
| TCATAATGTACTGTCCTAAT+TGG | - | chr6_3:10632195-10632214 | None:intergenic | 30.0% | |
| AAGGTTATGTTAATCTCCAA+TGG | + | chr6_3:10632302-10632321 | Msa0938820:intron | 30.0% | |
| TTCATCTTCATATCATGCTT+AGG | - | chr6_3:10632506-10632525 | None:intergenic | 30.0% | |
| GATTCATTCATCTTCACTTT+AGG | - | chr6_3:10632594-10632613 | None:intergenic | 30.0% | |
| CAAAAGAATGCTTAGACTAA+TGG | - | chr6_3:10632648-10632667 | None:intergenic | 30.0% | |
| CATGATGTGTAAAACTAAAG+GGG | - | chr6_3:10632802-10632821 | None:intergenic | 30.0% | |
| AGAAATGGAAAGACAACAAA+AGG | + | chr6_3:10632893-10632912 | Msa0938820:CDS | 30.0% | |
| ACTTTAGATACAGGAAAACA+TGG | - | chr6_3:10633025-10633044 | None:intergenic | 30.0% | |
| TGTATATATTCCCTTACAGT+TGG | + | chr6_3:10633055-10633074 | Msa0938820:intron | 30.0% | |
| ATGAATGGTCTGTCAAAATA+AGG | - | chr6_3:10633140-10633159 | None:intergenic | 30.0% | |
| !!! | TTTGGTTCTTTTGGTATAGT+TGG | - | chr6_3:10633503-10633522 | None:intergenic | 30.0% |
| !!! | ATGTGAAACTTTGGTTCTTT+TGG | - | chr6_3:10633512-10633531 | None:intergenic | 30.0% |
| GTTCACATTCTCAGTTTCTA+AGG | - | chr6_3:10630078-10630097 | None:intergenic | 35.0% | |
| AATTCGGCAAAGAAAGTTTG+TGG | + | chr6_3:10630193-10630212 | Msa0938820:CDS | 35.0% | |
| AGGTGAAAATGTTCTTGAAG+AGG | + | chr6_3:10630406-10630425 | Msa0938820:CDS | 35.0% | |
| AAAGGGTAGTTGTAGTTCAA+TGG | + | chr6_3:10630517-10630536 | Msa0938820:CDS | 35.0% | |
| GTTGTAGTTCAATGGTGAAA+AGG | + | chr6_3:10630525-10630544 | Msa0938820:CDS | 35.0% | |
| AGGAATAGTGTACCTGAAAA+TGG | + | chr6_3:10630575-10630594 | Msa0938820:CDS | 35.0% | |
| GGAATAGTGTACCTGAAAAT+GGG | + | chr6_3:10630576-10630595 | Msa0938820:CDS | 35.0% | |
| AAATGGGAAAGTGATGCATT+TGG | + | chr6_3:10630592-10630611 | Msa0938820:CDS | 35.0% | |
| AAAAGGGAGAAAGAGAAGAA+TGG | + | chr6_3:10630644-10630663 | Msa0938820:CDS | 35.0% | |
| AAAGGGAGAAAGAGAAGAAT+GGG | + | chr6_3:10630645-10630664 | Msa0938820:CDS | 35.0% | |
| ! | GAACAATCTGAAGTTGTTTC+TGG | + | chr6_3:10630758-10630777 | Msa0938820:CDS | 35.0% |
| ACTTTGACATCTGAACAACT+TGG | + | chr6_3:10630812-10630831 | Msa0938820:CDS | 35.0% | |
| !! | AACAACTTGGTTTGGATCAA+AGG | + | chr6_3:10630825-10630844 | Msa0938820:CDS | 35.0% |
| !! | ACAACTTGGTTTGGATCAAA+GGG | + | chr6_3:10630826-10630845 | Msa0938820:CDS | 35.0% |
| TCCAATGTAATCATACGTGT+CGG | - | chr6_3:10631157-10631176 | None:intergenic | 35.0% | |
| ACAAACACAAACATGGATAC+CGG | - | chr6_3:10631236-10631255 | None:intergenic | 35.0% | |
| GAATCATCTAGTACTATTGG+AGG | + | chr6_3:10631375-10631394 | Msa0938820:CDS | 35.0% | |
| CTATAATGCTATTGCAGCAA+AGG | + | chr6_3:10631545-10631564 | Msa0938820:intron | 35.0% | |
| ATAATGCTATTGCAGCAAAG+GGG | + | chr6_3:10631547-10631566 | Msa0938820:intron | 35.0% | |
| !! | AGAAGAACAGTTGATGAAGA+AGG | + | chr6_3:10631579-10631598 | Msa0938820:CDS | 35.0% |
| ATGAGAATTCCTATTGCACA+AGG | + | chr6_3:10631631-10631650 | Msa0938820:CDS | 35.0% | |
| GATTGTTCATCATGCAAGTA+TGG | + | chr6_3:10631838-10631857 | Msa0938820:intron | 35.0% | |
| !! | ATGATCATTTTTGCTCTTGC+TGG | + | chr6_3:10632260-10632279 | Msa0938820:intron | 35.0% |
| ! | TCAAGACAGTGTTTTACCAT+TGG | - | chr6_3:10632321-10632340 | None:intergenic | 35.0% |
| ACTCCATATCAGCTGATATA+CGG | - | chr6_3:10632344-10632363 | None:intergenic | 35.0% | |
| TGGAGTAAATTCAGTTTCAG+TGG | + | chr6_3:10632358-10632377 | Msa0938820:intron | 35.0% | |
| GTGAGATATTGTGAGCTATA+AGG | - | chr6_3:10632394-10632413 | None:intergenic | 35.0% | |
| ACTCAGAAAATGGCATGAAA+CGG | - | chr6_3:10632416-10632435 | None:intergenic | 35.0% | |
| TTGAGGACAAACTCAGAAAA+TGG | - | chr6_3:10632426-10632445 | None:intergenic | 35.0% | |
| TCATATCATGCTTAGGCTAA+TGG | - | chr6_3:10632499-10632518 | None:intergenic | 35.0% | |
| AATTAAGGTTCAGTGCAGTT+AGG | - | chr6_3:10632543-10632562 | None:intergenic | 35.0% | |
| ! | AGTTGATCTGAGGCTAATTA+AGG | - | chr6_3:10632558-10632577 | None:intergenic | 35.0% |
| ! | AAGTTGATTCAGTTGATCTG+AGG | - | chr6_3:10632568-10632587 | None:intergenic | 35.0% |
| !! | ATAATTCTGTTGGTAGCTTC+TGG | + | chr6_3:10632618-10632637 | Msa0938820:intron | 35.0% |
| TGAAGCTTCATAGTGATTTG+AGG | + | chr6_3:10632720-10632739 | Msa0938820:CDS | 35.0% | |
| GAAGCTTCATAGTGATTTGA+GGG | + | chr6_3:10632721-10632740 | Msa0938820:CDS | 35.0% | |
| TGATGAATGCTTAACTGTGT+AGG | + | chr6_3:10632833-10632852 | Msa0938820:intron | 35.0% | |
| GATGTGAAAGTTGGAAAACA+TGG | - | chr6_3:10632973-10632992 | None:intergenic | 35.0% | |
| ! | TTGATCTGAGATGTGAAAGT+TGG | - | chr6_3:10632982-10633001 | None:intergenic | 35.0% |
| GACAGTAACACTTTAGATAC+AGG | - | chr6_3:10633034-10633053 | None:intergenic | 35.0% | |
| AGGAAGAAATTAGGAGATTG+AGG | + | chr6_3:10633084-10633103 | Msa0938820:CDS | 35.0% | |
| AGAAATTAGGAGATTGAGGA+AGG | + | chr6_3:10633088-10633107 | Msa0938820:CDS | 35.0% | |
| !! | GCTTTTTGGCAATCATTTTG+AGG | + | chr6_3:10633237-10633256 | Msa0938820:intron | 35.0% |
| !!! | TTGGCAATCATTTTGAGGTT+TGG | + | chr6_3:10633242-10633261 | Msa0938820:intron | 35.0% |
| TTACGTGACTGTTGTGAATT+CGG | + | chr6_3:10633424-10633443 | Msa0938820:intron | 35.0% | |
| TCAAGCACTTGATCTTCTTA+TGG | - | chr6_3:10633541-10633560 | None:intergenic | 35.0% | |
| ! | TCACATAAGCAATTGACTTC+TGG | - | chr6_3:10633644-10633663 | None:intergenic | 35.0% |
| TCTAAGGGTTTCTTCTTCTC+TGG | - | chr6_3:10630062-10630081 | None:intergenic | 40.0% | |
| GTAGTTCAATGGTGAAAAGG+AGG | + | chr6_3:10630528-10630547 | Msa0938820:CDS | 40.0% | |
| ! | AGAGAGTAATGGAAGAAGCA+AGG | + | chr6_3:10630555-10630574 | Msa0938820:CDS | 40.0% |
| ! | TGCATCACTTTCCCATTTTC+AGG | - | chr6_3:10630590-10630609 | None:intergenic | 40.0% |
| ! | GAAAGTGATGCATTTGGTGA+AGG | + | chr6_3:10630598-10630617 | Msa0938820:CDS | 40.0% |
| !! | ATTTGGTGAAGGCTTTTGAG+AGG | + | chr6_3:10630609-10630628 | Msa0938820:CDS | 40.0% |
| AAGGGAGAAAGAGAAGAATG+GGG | + | chr6_3:10630646-10630665 | Msa0938820:CDS | 40.0% | |
| TCATCATCACCATCCTTAAC+AGG | - | chr6_3:10630740-10630759 | None:intergenic | 40.0% | |
| !! | GTTTCTGGTTGTGATGATGA+TGG | + | chr6_3:10630773-10630792 | Msa0938820:CDS | 40.0% |
| GACATCTGAACAACTTGGTT+TGG | + | chr6_3:10630817-10630836 | Msa0938820:CDS | 40.0% | |
| GGTTTCAGCTACTTCTTCTT+GGG | + | chr6_3:10630847-10630866 | Msa0938820:CDS | 40.0% | |
| CCTTCTGATTAAGTCATGTC+CGG | + | chr6_3:10631122-10631141 | Msa0938820:intron | 40.0% | |
| ACCGACACGTATGATTACAT+TGG | + | chr6_3:10631153-10631172 | Msa0938820:intron | 40.0% | |
| GTTAGTGTTTGTGTCATGTC+CGG | + | chr6_3:10631214-10631233 | Msa0938820:intron | 40.0% | |
| CATCTAGTACTATTGGAGGA+AGG | + | chr6_3:10631379-10631398 | Msa0938820:CDS | 40.0% | |
| GTCAGAAACCATTCAAGCTA+AGG | + | chr6_3:10631436-10631455 | Msa0938820:CDS | 40.0% | |
| !! | TGGCTATATTGGTGATGCAT+TGG | + | chr6_3:10631522-10631541 | Msa0938820:intron | 40.0% |
| TCAGGTTCATCAATAGTCCA+TGG | - | chr6_3:10631661-10631680 | None:intergenic | 40.0% | |
| ! | ATGGACTATTGATGAACCTG+AGG | + | chr6_3:10631660-10631679 | Msa0938820:CDS | 40.0% |
| CTATTGATGAACCTGAGGTA+AGG | + | chr6_3:10631665-10631684 | Msa0938820:intron | 40.0% | |
| TGAGAAAATGACCTTACCTC+AGG | - | chr6_3:10631679-10631698 | None:intergenic | 40.0% | |
| CTTGCATGATGAACAATCAG+AGG | - | chr6_3:10631836-10631855 | None:intergenic | 40.0% | |
| ATCCTAGCATACACATGACA+AGG | + | chr6_3:10632157-10632176 | Msa0938820:intron | 40.0% | |
| !! | TTTTGCTCTTGCTGGTTGTT+TGG | + | chr6_3:10632268-10632287 | Msa0938820:intron | 40.0% |
| TTGTTTGGCTACCCTTAACA+AGG | + | chr6_3:10632283-10632302 | Msa0938820:intron | 40.0% | |
| TGACCGTATATCAGCTGATA+TGG | + | chr6_3:10632338-10632357 | Msa0938820:intron | 40.0% | |
| CTATGAAGCTTCACGTCAAT+AGG | - | chr6_3:10632713-10632732 | None:intergenic | 40.0% | |
| TGAATGCTTAACTGTGTAGG+TGG | + | chr6_3:10632836-10632855 | Msa0938820:intron | 40.0% | |
| TGGCTGAAGAGGAAGAAATT+AGG | + | chr6_3:10633075-10633094 | Msa0938820:CDS | 40.0% | |
| GGTCTGTCAAAATAAGGCAT+TGG | - | chr6_3:10633134-10633153 | None:intergenic | 40.0% | |
| TTGACAGACCATTCATTCCA+AGG | + | chr6_3:10633144-10633163 | Msa0938820:CDS | 40.0% | |
| CATTACCTCCTTGGAATGAA+TGG | - | chr6_3:10633155-10633174 | None:intergenic | 40.0% | |
| CATTCATTCCAAGGAGGTAA+TGG | + | chr6_3:10633153-10633172 | Msa0938820:intron | 40.0% | |
| CATGACGCAGTTATTGATCT+TGG | + | chr6_3:10633282-10633301 | Msa0938820:intron | 40.0% | |
| TGGTGAGGTATGTGAAACTT+TGG | - | chr6_3:10633521-10633540 | None:intergenic | 40.0% | |
| CACTTGATCTTCTTATGGTG+AGG | - | chr6_3:10633536-10633555 | None:intergenic | 40.0% | |
| TGCTTCAACTGAGAATTCAG+AGG | + | chr6_3:10633590-10633609 | Msa0938820:exon | 40.0% | |
| CTGCTATAGACATAAGCAGA+TGG | + | chr6_3:10633767-10633786 | Msa0938820:three_prime_UTR | 40.0% | |
| ATAGACATAAGCAGATGGAG+TGG | + | chr6_3:10633772-10633791 | Msa0938820:three_prime_UTR | 40.0% | |
| TAGACATAAGCAGATGGAGT+GGG | + | chr6_3:10633773-10633792 | Msa0938820:three_prime_UTR | 40.0% | |
| TTTCGCCGCAGAAGAGAATT+CGG | + | chr6_3:10630177-10630196 | Msa0938820:CDS | 45.0% | |
| CTTTGCCGAATTCTCTTCTG+CGG | - | chr6_3:10630185-10630204 | None:intergenic | 45.0% | |
| AAATGTGGAGAGAACAGCGA+TGG | + | chr6_3:10630266-10630285 | Msa0938820:CDS | 45.0% | |
| AGTGTGTTTGCCAAGCGTAT+CGG | + | chr6_3:10630294-10630313 | Msa0938820:CDS | 45.0% | |
| CTCTCAAATTCCGATACGCT+TGG | - | chr6_3:10630307-10630326 | None:intergenic | 45.0% | |
| AAGGAGGAGAGAGAGAGTAA+TGG | + | chr6_3:10630544-10630563 | Msa0938820:CDS | 45.0% | |
| GAAAGAGAAGAATGGGGAAG+AGG | + | chr6_3:10630652-10630671 | Msa0938820:CDS | 45.0% | |
| GGTGATGAAATGGGCATTAC+CGG | + | chr6_3:10630697-10630716 | Msa0938820:CDS | 45.0% | |
| GTGATGAAATGGGCATTACC+GGG | + | chr6_3:10630698-10630717 | Msa0938820:CDS | 45.0% | |
| GCAACTTCAACAGCCTGTTA+AGG | + | chr6_3:10630724-10630743 | Msa0938820:CDS | 45.0% | |
| CTTCAACAGCCTGTTAAGGA+TGG | + | chr6_3:10630728-10630747 | Msa0938820:CDS | 45.0% | |
| GGGTTTCAGCTACTTCTTCT+TGG | + | chr6_3:10630846-10630865 | Msa0938820:CDS | 45.0% | |
| GCTACTTCTTCTTGGGATTG+TGG | + | chr6_3:10630854-10630873 | Msa0938820:CDS | 45.0% | |
| GTGTGTAGCAGGAATTCTTC+TGG | + | chr6_3:10631023-10631042 | Msa0938820:CDS | 45.0% | |
| TGTAGCAGGAATTCTTCTGG+TGG | + | chr6_3:10631026-10631045 | Msa0938820:CDS | 45.0% | |
| CCGGACATGACTTAATCAGA+AGG | - | chr6_3:10631125-10631144 | None:intergenic | 45.0% | |
| CAGGGACACAAACACAAACA+TGG | - | chr6_3:10631243-10631262 | None:intergenic | 45.0% | |
| CTAGTACTATTGGAGGAAGG+AGG | + | chr6_3:10631382-10631401 | Msa0938820:CDS | 45.0% | |
| ACCATTCAAGCTAAGGACTG+AGG | + | chr6_3:10631443-10631462 | Msa0938820:CDS | 45.0% | |
| ! | ACCTCAGTCCTTAGCTTGAA+TGG | - | chr6_3:10631447-10631466 | None:intergenic | 45.0% |
| CATGGAAGACCTTGTGCAAT+AGG | - | chr6_3:10631643-10631662 | None:intergenic | 45.0% | |
| CTATTGCACAAGGTCTTCCA+TGG | + | chr6_3:10631641-10631660 | Msa0938820:CDS | 45.0% | |
| GATGAACAATCAGAGGCTGA+TGG | - | chr6_3:10631829-10631848 | None:intergenic | 45.0% | |
| CTCCTTGTCATGTGTATGCT+AGG | - | chr6_3:10632162-10632181 | None:intergenic | 45.0% | |
| ! | ACAGTGCTTGCTAAAACCTC+CGG | + | chr6_3:10632670-10632689 | Msa0938820:intron | 45.0% |
| TTTGTGCTTTCTTTCACCGG+AGG | - | chr6_3:10632689-10632708 | None:intergenic | 45.0% | |
| ! | GGCTTTGTGCTTTCTTTCAC+CGG | - | chr6_3:10632692-10632711 | None:intergenic | 45.0% |
| TCGCGCTGAATTTGATCATC+AGG | + | chr6_3:10632751-10632770 | Msa0938820:CDS | 45.0% | |
| TCCTCTTCAGCCAACTGTAA+GGG | - | chr6_3:10633068-10633087 | None:intergenic | 45.0% | |
| TTCCTCTTCAGCCAACTGTA+AGG | - | chr6_3:10633069-10633088 | None:intergenic | 45.0% | |
| !! | TAAGGCATTGGCTGAGCTTT+AGG | - | chr6_3:10633122-10633141 | None:intergenic | 45.0% |
| ACAGACCATTCATTCCAAGG+AGG | + | chr6_3:10633147-10633166 | Msa0938820:CDS | 45.0% | |
| ! | TCATTCCAAGGAGGTAATGG+TGG | + | chr6_3:10633156-10633175 | Msa0938820:intron | 45.0% |
| TTGATCCACCATTACCTCCT+TGG | - | chr6_3:10633164-10633183 | None:intergenic | 45.0% | |
| AGACATAAGCAGATGGAGTG+GGG | + | chr6_3:10633774-10633793 | Msa0938820:three_prime_UTR | 45.0% | |
| ! | CGATGAAGAAGAAGGCGTAG+AGG | + | chr6_3:10630481-10630500 | Msa0938820:CDS | 50.0% |
| GGCTGTTGAAGTTGCAATCC+CGG | - | chr6_3:10630719-10630738 | None:intergenic | 50.0% | |
| TCTTCTTGGGATTGTGGCAG+TGG | + | chr6_3:10630860-10630879 | Msa0938820:CDS | 50.0% | |
| TGTTGTGCAGTGTGTGTAGC+AGG | + | chr6_3:10631012-10631031 | Msa0938820:intron | 50.0% | |
| GTACTATTGGAGGAAGGAGG+TGG | + | chr6_3:10631385-10631404 | Msa0938820:CDS | 50.0% | |
| TCCCTTACAGTTGGCTGAAG+AGG | + | chr6_3:10633064-10633083 | Msa0938820:intron | 50.0% | |
| TGTGGAGAGAACAGCGATGG+TGG | + | chr6_3:10630269-10630288 | Msa0938820:CDS | 55.0% | |
| GGGATTGTGGCAGTGGAAGA+AGG | + | chr6_3:10630867-10630886 | Msa0938820:CDS | 55.0% | |
| !! | TACGTGTCGGTGTCAGACAC+CGG | - | chr6_3:10631144-10631163 | None:intergenic | 55.0% |
| AGCAGATGGAGTGGGGCAAA+AGG | + | chr6_3:10633781-10633800 | Msa0938820:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 10630053 | 10633890 | 10630053 | ID=Msa0938820;Name=Msa0938820 |
| chr6_3 | mRNA | 10630053 | 10633890 | 10630053 | ID=Msa0938820-mRNA-1;Parent=Msa0938820;Name=Msa0938820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.87|1|1|1|8|289|488 |
| chr6_3 | exon | 10630053 | 10630888 | 10630053 | ID=Msa0938820-mRNA-1:exon:3405;Parent=Msa0938820-mRNA-1 |
| chr6_3 | exon | 10631022 | 10631067 | 10631022 | ID=Msa0938820-mRNA-1:exon:3406;Parent=Msa0938820-mRNA-1 |
| chr6_3 | exon | 10631369 | 10631464 | 10631369 | ID=Msa0938820-mRNA-1:exon:3407;Parent=Msa0938820-mRNA-1 |
| chr6_3 | exon | 10631562 | 10631681 | 10631562 | ID=Msa0938820-mRNA-1:exon:3408;Parent=Msa0938820-mRNA-1 |
| chr6_3 | exon | 10632674 | 10632772 | 10632674 | ID=Msa0938820-mRNA-1:exon:3409;Parent=Msa0938820-mRNA-1 |
| chr6_3 | exon | 10632855 | 10632914 | 10632855 | ID=Msa0938820-mRNA-1:exon:3410;Parent=Msa0938820-mRNA-1 |
| chr6_3 | exon | 10633074 | 10633168 | 10633074 | ID=Msa0938820-mRNA-1:exon:3411;Parent=Msa0938820-mRNA-1 |
| chr6_3 | exon | 10633487 | 10633890 | 10633487 | ID=Msa0938820-mRNA-1:exon:3412;Parent=Msa0938820-mRNA-1 |
| chr6_3 | CDS | 10630053 | 10630888 | 10630053 | ID=Msa0938820-mRNA-1:cds;Parent=Msa0938820-mRNA-1 |
| chr6_3 | CDS | 10631022 | 10631067 | 10631022 | ID=Msa0938820-mRNA-1:cds;Parent=Msa0938820-mRNA-1 |
| chr6_3 | CDS | 10631369 | 10631464 | 10631369 | ID=Msa0938820-mRNA-1:cds;Parent=Msa0938820-mRNA-1 |
| chr6_3 | CDS | 10631562 | 10631681 | 10631562 | ID=Msa0938820-mRNA-1:cds;Parent=Msa0938820-mRNA-1 |
| chr6_3 | CDS | 10632674 | 10632772 | 10632674 | ID=Msa0938820-mRNA-1:cds;Parent=Msa0938820-mRNA-1 |
| chr6_3 | CDS | 10632855 | 10632914 | 10632855 | ID=Msa0938820-mRNA-1:cds;Parent=Msa0938820-mRNA-1 |
| chr6_3 | CDS | 10633074 | 10633168 | 10633074 | ID=Msa0938820-mRNA-1:cds;Parent=Msa0938820-mRNA-1 |
| chr6_3 | CDS | 10633487 | 10633601 | 10633487 | ID=Msa0938820-mRNA-1:cds;Parent=Msa0938820-mRNA-1 |
| chr6_3 | three_prime_UTR | 10633602 | 10633890 | 10633602 | ID=Msa0938820-mRNA-1:three_prime_utr;Parent=Msa0938820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
