Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162590 | XP_003625261.1 | 98.305 | 118 | 2 | 0 | 26 | 143 | 22 | 139 | 2.09e-75 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162590 | G7KVD7 | 98.305 | 118 | 2 | 0 | 26 | 143 | 22 | 139 | 9.98e-76 | 233 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa1162590 | 0.833806 | 4.315598e-56 | -8.615850e-47 |
| Msa0016040 | Msa1162590 | 0.800548 | 1.368653e-48 | -8.615850e-47 |
| Msa0018160 | Msa1162590 | 0.812171 | 4.849117e-51 | -8.615850e-47 |
| Msa0025580 | Msa1162590 | 0.816153 | 6.403196e-52 | -8.615850e-47 |
| Msa0027280 | Msa1162590 | 0.846741 | 1.794726e-59 | -8.615850e-47 |
| Msa0035140 | Msa1162590 | 0.801969 | 7.005236e-49 | -8.615850e-47 |
| Msa0036870 | Msa1162590 | 0.808840 | 2.541833e-50 | -8.615850e-47 |
| Msa0048510 | Msa1162590 | 0.826867 | 2.142966e-54 | -8.615850e-47 |
| Msa0052260 | Msa1162590 | 0.825209 | 5.309245e-54 | -8.615850e-47 |
| Msa0054690 | Msa1162590 | 0.819385 | 1.194005e-52 | -8.615850e-47 |
| Msa0090400 | Msa1162590 | 0.807066 | 6.061228e-50 | -8.615850e-47 |
| Msa0097260 | Msa1162590 | 0.801140 | 1.035962e-48 | -8.615850e-47 |
| Msa0603380 | Msa1162590 | 0.802592 | 5.213573e-49 | -8.615850e-47 |
| Msa0658640 | Msa1162590 | 0.808275 | 3.355132e-50 | -8.615850e-47 |
| Msa0661150 | Msa1162590 | 0.830946 | 2.205345e-55 | -8.615850e-47 |
| Msa0666700 | Msa1162590 | 0.822546 | 2.236041e-53 | -8.615850e-47 |
| Msa0721080 | Msa1162590 | 0.806794 | 6.917917e-50 | -8.615850e-47 |
| Msa0735780 | Msa1162590 | 0.851399 | 9.101322e-61 | -8.615850e-47 |
| Msa0761670 | Msa1162590 | 0.843860 | 1.080277e-58 | -8.615850e-47 |
| Msa0791730 | Msa1162590 | 0.804086 | 2.557717e-49 | -8.615850e-47 |
| Msa0795870 | Msa1162590 | 0.837993 | 3.745126e-57 | -8.615850e-47 |
| Msa0824450 | Msa1162590 | 0.815225 | 1.030910e-51 | -8.615850e-47 |
| Msa0833650 | Msa1162590 | 0.834420 | 3.028411e-56 | -8.615850e-47 |
| Msa0123070 | Msa1162590 | 0.809495 | 1.839469e-50 | -8.615850e-47 |
| Msa0128310 | Msa1162590 | 0.807959 | 3.917255e-50 | -8.615850e-47 |
| Msa0133150 | Msa1162590 | 0.806918 | 6.514176e-50 | -8.615850e-47 |
| Msa0140280 | Msa1162590 | 0.809500 | 1.835388e-50 | -8.615850e-47 |
| Msa0146040 | Msa1162590 | 0.817426 | 3.317811e-52 | -8.615850e-47 |
| Msa0173730 | Msa1162590 | 0.824995 | 5.965507e-54 | -8.615850e-47 |
| Msa0173810 | Msa1162590 | 0.804331 | 2.274441e-49 | -8.615850e-47 |
| Msa0174440 | Msa1162590 | 0.803199 | 3.907304e-49 | -8.615850e-47 |
| Msa0182190 | Msa1162590 | 0.800661 | 1.297888e-48 | -8.615850e-47 |
| Msa0182240 | Msa1162590 | 0.810373 | 1.190673e-50 | -8.615850e-47 |
| Msa0190570 | Msa1162590 | 0.829825 | 4.145136e-55 | -8.615850e-47 |
| Msa0200050 | Msa1162590 | 0.837361 | 5.438171e-57 | -8.615850e-47 |
| Msa0225860 | Msa1162590 | 0.838472 | 2.817571e-57 | -8.615850e-47 |
| Msa0380670 | Msa1162590 | 0.812745 | 3.632985e-51 | -8.615850e-47 |
| Msa0389950 | Msa1162590 | 0.807003 | 6.250408e-50 | -8.615850e-47 |
| Msa0400000 | Msa1162590 | 0.812357 | 4.415008e-51 | -8.615850e-47 |
| Msa0430300 | Msa1162590 | 0.814213 | 1.727144e-51 | -8.615850e-47 |
| Msa0447750 | Msa1162590 | 0.802901 | 4.501585e-49 | -8.615850e-47 |
| Msa0476650 | Msa1162590 | 0.802641 | 5.094869e-49 | -8.615850e-47 |
| Msa0997920 | Msa1162590 | 0.801883 | 7.297816e-49 | -8.615850e-47 |
| Msa1035220 | Msa1162590 | 0.813726 | 2.212337e-51 | -8.615850e-47 |
| Msa1081390 | Msa1162590 | 0.838223 | 3.266838e-57 | -8.615850e-47 |
| Msa1082200 | Msa1162590 | 0.803898 | 2.798070e-49 | -8.615850e-47 |
| Msa1090140 | Msa1162590 | 0.812960 | 3.258481e-51 | -8.615850e-47 |
| Msa1094010 | Msa1162590 | 0.803159 | 3.982250e-49 | -8.615850e-47 |
| Msa1103990 | Msa1162590 | 0.810097 | 1.365452e-50 | -8.615850e-47 |
| Msa0242590 | Msa1162590 | 0.823668 | 1.223450e-53 | -8.615850e-47 |
| Msa0260510 | Msa1162590 | 0.808301 | 3.313140e-50 | -8.615850e-47 |
| Msa0280790 | Msa1162590 | 0.815010 | 1.150687e-51 | -8.615850e-47 |
| Msa0298470 | Msa1162590 | 0.836526 | 8.887705e-57 | -8.615850e-47 |
| Msa0337480 | Msa1162590 | 0.818459 | 1.938880e-52 | -8.615850e-47 |
| Msa0340500 | Msa1162590 | 0.847801 | 9.187160e-60 | -8.615850e-47 |
| Msa1116220 | Msa1162590 | 0.842590 | 2.356060e-58 | -8.615850e-47 |
| Msa1116660 | Msa1162590 | 0.806502 | 7.974060e-50 | -8.615850e-47 |
| Msa1132840 | Msa1162590 | 0.832308 | 1.017851e-55 | -8.615850e-47 |
| Msa1162590 | Msa1186020 | 0.814499 | 1.493806e-51 | -8.615850e-47 |
| Msa1162590 | Msa1200890 | 0.813696 | 2.245615e-51 | -8.615850e-47 |
| Msa1162590 | Msa1208950 | 0.809789 | 1.590699e-50 | -8.615850e-47 |
| Msa1162590 | Msa1215870 | 0.802283 | 6.037101e-49 | -8.615850e-47 |
| Msa1162590 | Msa1224930 | 0.809092 | 2.244176e-50 | -8.615850e-47 |
| Msa1162590 | Msa1226520 | 0.811195 | 7.906233e-51 | -8.615850e-47 |
| Msa1162590 | Msa1333080 | 0.811529 | 6.690133e-51 | -8.615850e-47 |
| Msa1162590 | Msa1343170 | 0.828224 | 1.012482e-54 | -8.615850e-47 |
| Msa1162590 | Msa1343180 | 0.850026 | 2.216000e-60 | -8.615850e-47 |
| Msa1162590 | Msa1359690 | 0.814018 | 1.907386e-51 | -8.615850e-47 |
| Msa1162590 | Msa1397400 | 0.825505 | 4.519630e-54 | -8.615850e-47 |
| Msa1162590 | Msa1420950 | 0.802361 | 5.818003e-49 | -8.615850e-47 |
| Msa1162590 | Msa1437930 | 0.814661 | 1.375324e-51 | -8.615850e-47 |
| Msa0495550 | Msa1162590 | 0.820523 | 6.558603e-53 | -8.615850e-47 |
| Msa0520990 | Msa1162590 | 0.800225 | 1.592843e-48 | -8.615850e-47 |
| Msa0530780 | Msa1162590 | 0.809929 | 1.483982e-50 | -8.615850e-47 |
| Msa0531960 | Msa1162590 | 0.813365 | 2.655527e-51 | -8.615850e-47 |
| Msa0548470 | Msa1162590 | 0.815299 | 9.927860e-52 | -8.615850e-47 |
| Msa0557460 | Msa1162590 | 0.813778 | 2.154295e-51 | -8.615850e-47 |
| Msa0580370 | Msa1162590 | 0.837607 | 4.705454e-57 | -8.615850e-47 |
| Msa0888790 | Msa1162590 | 0.803364 | 3.611867e-49 | -8.615850e-47 |
| Msa0915520 | Msa1162590 | 0.836588 | 8.572214e-57 | -8.615850e-47 |
| Msa0938820 | Msa1162590 | 0.809728 | 1.639657e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162590 | MtrunA17_Chr7g0258701 | 98.305 | 118 | 2 | 0 | 26 | 143 | 22 | 139 | 1.92e-79 | 233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162590 | AT2G42110.1 | 48.837 | 129 | 58 | 4 | 22 | 143 | 10 | 137 | 5.08e-26 | 97.4 |
Find 45 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGATGGATGGACCGTTAT+AGG | 0.322706 | 7_4:-53359637 | None:intergenic |
| TAGGAATCAAAATACTAATC+AGG | 0.329418 | 7_4:-53359618 | None:intergenic |
| AAAATGTTAATATGATTTGA+TGG | 0.331087 | 7_4:-53359666 | None:intergenic |
| AGTCAGTGCTCCGGCAGCTC+AGG | 0.334794 | 7_4:+53359999 | Msa1162590:CDS |
| GACTTCCGGCTCACTGTTGC+CGG | 0.373087 | 7_4:-53359980 | None:intergenic |
| TTGTTATTGAAATTGAATAA+TGG | 0.381922 | 7_4:-53359588 | None:intergenic |
| ACGTAACTCTTTCTTCTCAT+TGG | 0.414695 | 7_4:-53359867 | None:intergenic |
| GCTGCCGGAGCACTGACTTC+CGG | 0.414941 | 7_4:-53359994 | None:intergenic |
| CAGAAACAAGTCATCACTCT+TGG | 0.430413 | 7_4:+53360033 | Msa1162590:CDS |
| TTGGGGTCTCACCTTGTGAA+TGG | 0.442298 | 7_4:-53360059 | None:intergenic |
| TACTGTTACTACTGATGCTA+AGG | 0.475719 | 7_4:+53359784 | Msa1162590:CDS |
| ACATGGCGTAGAACTGTAGA+AGG | 0.478353 | 7_4:+53360545 | Msa1162590:CDS |
| GGCGGATCTACACTTGGTTG+AGG | 0.489918 | 7_4:-53361701 | None:intergenic |
| AGAGAGCCTAAACAATATCC+AGG | 0.501447 | 7_4:-53361724 | None:intergenic |
| ATATTGTCAGTGGCGTATCC+AGG | 0.502691 | 7_4:+53360624 | Msa1162590:CDS |
| GCGGATCTACACTTGGTTGA+GGG | 0.503585 | 7_4:-53361700 | None:intergenic |
| ACTCAGGAAGTTTGCTGAAG+TGG | 0.504736 | 7_4:+53359841 | Msa1162590:CDS |
| AAACGGCACCACTGCCGTTG+TGG | 0.512072 | 7_4:+53359940 | Msa1162590:CDS |
| AATCTTCTGATGAGCTACTC+AGG | 0.514440 | 7_4:+53359825 | Msa1162590:CDS |
| AGAAACAAGTCATCACTCTT+GGG | 0.516768 | 7_4:+53360034 | Msa1162590:CDS |
| TTTGCTTACTCTCTCTGCAA+TGG | 0.518570 | 7_4:+53359709 | Msa1162590:exon |
| TATCTCTAACCCTGAGCTGC+CGG | 0.524168 | 7_4:-53360009 | None:intergenic |
| AGGAATCAAAATACTAATCA+GGG | 0.526333 | 7_4:-53359617 | None:intergenic |
| AGTAGCAGAAGAAGCAGAAG+TGG | 0.529137 | 7_4:-53359756 | None:intergenic |
| CCTCCTTTCCACAACGGCAG+TGG | 0.532545 | 7_4:-53359948 | None:intergenic |
| TCCGCCCCTGGATATTGTTT+AGG | 0.533179 | 7_4:+53361718 | Msa1162590:CDS |
| CAATCTGAGAGCTCTTCAAA+CGG | 0.537248 | 7_4:+53359923 | Msa1162590:CDS |
| CTCAGGAAGTTTGCTGAAGT+GGG | 0.542614 | 7_4:+53359842 | Msa1162590:CDS |
| TGAATAATGGAAGTGAGGTA+AGG | 0.549914 | 7_4:-53359575 | None:intergenic |
| GCACCACTGCCGTTGTGGAA+AGG | 0.550600 | 7_4:+53359945 | Msa1162590:CDS |
| GGGTGTGCCCCTGCACACCC+TGG | 0.554888 | 7_4:-53361680 | None:intergenic |
| TGAGCCGGAAGTCAGTGCTC+CGG | 0.557573 | 7_4:+53359990 | Msa1162590:CDS |
| TCCAGGGGCGGATCTACACT+TGG | 0.565303 | 7_4:-53361707 | None:intergenic |
| ACCAAGTGTAGATCCGCCCC+TGG | 0.566726 | 7_4:+53361706 | Msa1162590:CDS |
| GAAATTGAATAATGGAAGTG+AGG | 0.571893 | 7_4:-53359580 | None:intergenic |
| CATTGATCAAACGCTTATGA+CGG | 0.586996 | 7_4:-53360601 | None:intergenic |
| TTGATCAATGATATTGTCAG+TGG | 0.598220 | 7_4:+53360614 | Msa1162590:CDS |
| GTCAGTGCTCCGGCAGCTCA+GGG | 0.601711 | 7_4:+53360000 | Msa1162590:CDS |
| GAGAGCCTAAACAATATCCA+GGG | 0.604058 | 7_4:-53361723 | None:intergenic |
| CCACTGCCGTTGTGGAAAGG+AGG | 0.606383 | 7_4:+53359948 | Msa1162590:CDS |
| AGTGGCGTATCCAGGACCCT+AGG | 0.611741 | 7_4:+53360632 | Msa1162590:CDS |
| GCCTAAACAATATCCAGGGG+CGG | 0.638177 | 7_4:-53361719 | None:intergenic |
| ACTCTTGGGAACCATTCACA+AGG | 0.711090 | 7_4:+53360048 | Msa1162590:CDS |
| AAGCGACCTCCTTTCCACAA+CGG | 0.711834 | 7_4:-53359954 | None:intergenic |
| AGAGCCTAAACAATATCCAG+GGG | 0.730142 | 7_4:-53361722 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAAAAAATAATTAATGTA+TGG | + | chr7_4:53360951-53360970 | Msa1162590:intron | 10.0% |
| !! | TGTTAATAAATTATTTGATT+TGG | - | chr7_4:53361082-53361101 | None:intergenic | 10.0% |
| !! | TGTTAATAAATTATTTGATT+GGG | - | chr7_4:53361082-53361101 | None:intergenic | 10.0% |
| !! | TTGTTAATAAATTATTTGAT+TGG | - | chr7_4:53361083-53361102 | None:intergenic | 10.0% |
| !! | GTAAAAAAATAATTAATGTA+TGG | + | chr7_4:53360951-53360970 | Msa1162590:intron | 10.0% |
| !! | TGTTAATAAATTATTTGATT+TGG | - | chr7_4:53361082-53361101 | None:intergenic | 10.0% |
| !! | TGTTAATAAATTATTTGATT+GGG | - | chr7_4:53361082-53361101 | None:intergenic | 10.0% |
| !! | TTGTTAATAAATTATTTGAT+TGG | - | chr7_4:53361083-53361102 | None:intergenic | 10.0% |
| !!! | TTGTTATTGAAATTGAATAA+TGG | - | chr7_4:53359591-53359610 | None:intergenic | 15.0% |
| !! | AAAATGTTAATATGATTTGA+TGG | - | chr7_4:53359669-53359688 | None:intergenic | 15.0% |
| !! | TAAAATAAATAGAGATATGT+TGG | + | chr7_4:53360929-53360948 | Msa1162590:intron | 15.0% |
| !!! | CAACTTTTTTTTTATTAAGA+TGG | + | chr7_4:53361003-53361022 | Msa1162590:intron | 15.0% |
| !!! | TGATATTTTTACTATAATCA+TGG | - | chr7_4:53361295-53361314 | None:intergenic | 15.0% |
| !!! | TTTAAAAACAAAATGTTTTC+TGG | + | chr7_4:53361356-53361375 | Msa1162590:intron | 15.0% |
| !! | ATCATCTTATTATGATTTAT+GGG | - | chr7_4:53361388-53361407 | None:intergenic | 15.0% |
| !! | TATCATCTTATTATGATTTA+TGG | - | chr7_4:53361389-53361408 | None:intergenic | 15.0% |
| !!! | TGGAAAAAATATAAGATTTT+AGG | + | chr7_4:53361641-53361660 | Msa1162590:CDS | 15.0% |
| !!! | TTGTTATTGAAATTGAATAA+TGG | - | chr7_4:53359591-53359610 | None:intergenic | 15.0% |
| !! | AAAATGTTAATATGATTTGA+TGG | - | chr7_4:53359669-53359688 | None:intergenic | 15.0% |
| !! | TAAAATAAATAGAGATATGT+TGG | + | chr7_4:53360929-53360948 | Msa1162590:intron | 15.0% |
| !!! | CAACTTTTTTTTTATTAAGA+TGG | + | chr7_4:53361003-53361022 | Msa1162590:intron | 15.0% |
| !!! | TGATATTTTTACTATAATCA+TGG | - | chr7_4:53361295-53361314 | None:intergenic | 15.0% |
| !!! | TTTAAAAACAAAATGTTTTC+TGG | + | chr7_4:53361356-53361375 | Msa1162590:intron | 15.0% |
| !! | ATCATCTTATTATGATTTAT+GGG | - | chr7_4:53361388-53361407 | None:intergenic | 15.0% |
| !! | TATCATCTTATTATGATTTA+TGG | - | chr7_4:53361389-53361408 | None:intergenic | 15.0% |
| !!! | TGGAAAAAATATAAGATTTT+AGG | + | chr7_4:53361641-53361660 | Msa1162590:CDS | 15.0% |
| !!! | TAGTATTTTGATTCCTATAA+CGG | + | chr7_4:53359624-53359643 | Msa1162590:five_prime_UTR | 20.0% |
| !! | AATTCTAATTAACAAGGTAA+CGG | - | chr7_4:53360133-53360152 | None:intergenic | 20.0% |
| !! | TTCGTACACTAATTAATTAA+GGG | - | chr7_4:53360190-53360209 | None:intergenic | 20.0% |
| !! | TTTCGTACACTAATTAATTA+AGG | - | chr7_4:53360191-53360210 | None:intergenic | 20.0% |
| !! | GTGATTAAGATATATTTAAC+TGG | - | chr7_4:53360238-53360257 | None:intergenic | 20.0% |
| !! | ATATATCTTAATCACTTTGA+TGG | + | chr7_4:53360243-53360262 | Msa1162590:intron | 20.0% |
| !!! | TAACATTCTCCTTTTTTTTT+GGG | - | chr7_4:53360311-53360330 | None:intergenic | 20.0% |
| !!! | TTAACATTCTCCTTTTTTTT+TGG | - | chr7_4:53360312-53360331 | None:intergenic | 20.0% |
| !!! | TTTGCTGCATTAATTTTTTT+GGG | - | chr7_4:53360471-53360490 | None:intergenic | 20.0% |
| !!! | TTTTGCTGCATTAATTTTTT+TGG | - | chr7_4:53360472-53360491 | None:intergenic | 20.0% |
| !! | ACAATTAATGTACAAAAACT+TGG | - | chr7_4:53360728-53360747 | None:intergenic | 20.0% |
| !!! | ATGGACAAAAAATTTAAAGT+TGG | - | chr7_4:53361276-53361295 | None:intergenic | 20.0% |
| !!! | TTTTTTCCAGTTTTTTTTCT+TGG | + | chr7_4:53361556-53361575 | Msa1162590:intron | 20.0% |
| !!! | TAGTATTTTGATTCCTATAA+CGG | + | chr7_4:53359624-53359643 | Msa1162590:five_prime_UTR | 20.0% |
| !! | AATTCTAATTAACAAGGTAA+CGG | - | chr7_4:53360133-53360152 | None:intergenic | 20.0% |
| !! | TTCGTACACTAATTAATTAA+GGG | - | chr7_4:53360190-53360209 | None:intergenic | 20.0% |
| !! | TTTCGTACACTAATTAATTA+AGG | - | chr7_4:53360191-53360210 | None:intergenic | 20.0% |
| !! | GTGATTAAGATATATTTAAC+TGG | - | chr7_4:53360238-53360257 | None:intergenic | 20.0% |
| !! | ATATATCTTAATCACTTTGA+TGG | + | chr7_4:53360243-53360262 | Msa1162590:intron | 20.0% |
| !!! | TAACATTCTCCTTTTTTTTT+GGG | - | chr7_4:53360311-53360330 | None:intergenic | 20.0% |
| !!! | TTAACATTCTCCTTTTTTTT+TGG | - | chr7_4:53360312-53360331 | None:intergenic | 20.0% |
| !!! | TTTGCTGCATTAATTTTTTT+GGG | - | chr7_4:53360471-53360490 | None:intergenic | 20.0% |
| !!! | TTTTGCTGCATTAATTTTTT+TGG | - | chr7_4:53360472-53360491 | None:intergenic | 20.0% |
| !! | ACAATTAATGTACAAAAACT+TGG | - | chr7_4:53360728-53360747 | None:intergenic | 20.0% |
| !!! | ATGGACAAAAAATTTAAAGT+TGG | - | chr7_4:53361276-53361295 | None:intergenic | 20.0% |
| !!! | TTTTTTCCAGTTTTTTTTCT+TGG | + | chr7_4:53361556-53361575 | Msa1162590:intron | 20.0% |
| ! | AGGAATCAAAATACTAATCA+GGG | - | chr7_4:53359620-53359639 | None:intergenic | 25.0% |
| ! | TAGGAATCAAAATACTAATC+AGG | - | chr7_4:53359621-53359640 | None:intergenic | 25.0% |
| !!! | TATGATTTGATGGTTTTATG+AGG | - | chr7_4:53359659-53359678 | None:intergenic | 25.0% |
| !!! | ACCAAGAAAAAGTGTTAATT+GGG | - | chr7_4:53360080-53360099 | None:intergenic | 25.0% |
| ! | GTTACCTTGTTAATTAGAAT+TGG | + | chr7_4:53360132-53360151 | Msa1162590:intron | 25.0% |
| !! | TTTAGCTTACCCAAAAAAAA+AGG | + | chr7_4:53360299-53360318 | Msa1162590:intron | 25.0% |
| ! | ATTGGTTAAACAGTTAAAAG+AGG | + | chr7_4:53360348-53360367 | Msa1162590:intron | 25.0% |
| !!! | AATTTTTTTGGGTCTTGTTA+AGG | - | chr7_4:53360460-53360479 | None:intergenic | 25.0% |
| ! | CTTTCTTAATTGATGTGATT+TGG | - | chr7_4:53360789-53360808 | None:intergenic | 25.0% |
| ! | ATCACATCAATTAAGAAAGT+CGG | + | chr7_4:53360790-53360809 | Msa1162590:intron | 25.0% |
| !! | ACAAAGTGAGTCTTATAAAA+AGG | + | chr7_4:53360978-53360997 | Msa1162590:intron | 25.0% |
| !! | CAAAGTGAGTCTTATAAAAA+GGG | + | chr7_4:53360979-53360998 | Msa1162590:intron | 25.0% |
| !!! | ATTAAGATGGTCTTATAGTT+AGG | + | chr7_4:53361016-53361035 | Msa1162590:intron | 25.0% |
| !!! | TTAAGATGGTCTTATAGTTA+GGG | + | chr7_4:53361017-53361036 | Msa1162590:intron | 25.0% |
| ! | TTATTATGATTTATGGGCTT+GGG | - | chr7_4:53361382-53361401 | None:intergenic | 25.0% |
| ! | AGGAATCAAAATACTAATCA+GGG | - | chr7_4:53359620-53359639 | None:intergenic | 25.0% |
| ! | TAGGAATCAAAATACTAATC+AGG | - | chr7_4:53359621-53359640 | None:intergenic | 25.0% |
| !!! | TATGATTTGATGGTTTTATG+AGG | - | chr7_4:53359659-53359678 | None:intergenic | 25.0% |
| !!! | ACCAAGAAAAAGTGTTAATT+GGG | - | chr7_4:53360080-53360099 | None:intergenic | 25.0% |
| ! | GTTACCTTGTTAATTAGAAT+TGG | + | chr7_4:53360132-53360151 | Msa1162590:intron | 25.0% |
| !! | TTTAGCTTACCCAAAAAAAA+AGG | + | chr7_4:53360299-53360318 | Msa1162590:intron | 25.0% |
| ! | ATTGGTTAAACAGTTAAAAG+AGG | + | chr7_4:53360348-53360367 | Msa1162590:intron | 25.0% |
| !!! | AATTTTTTTGGGTCTTGTTA+AGG | - | chr7_4:53360460-53360479 | None:intergenic | 25.0% |
| ! | CTTTCTTAATTGATGTGATT+TGG | - | chr7_4:53360789-53360808 | None:intergenic | 25.0% |
| ! | ATCACATCAATTAAGAAAGT+CGG | + | chr7_4:53360790-53360809 | Msa1162590:intron | 25.0% |
| !! | ACAAAGTGAGTCTTATAAAA+AGG | + | chr7_4:53360978-53360997 | Msa1162590:intron | 25.0% |
| !! | CAAAGTGAGTCTTATAAAAA+GGG | + | chr7_4:53360979-53360998 | Msa1162590:intron | 25.0% |
| !!! | ATTAAGATGGTCTTATAGTT+AGG | + | chr7_4:53361016-53361035 | Msa1162590:intron | 25.0% |
| !!! | TTAAGATGGTCTTATAGTTA+GGG | + | chr7_4:53361017-53361036 | Msa1162590:intron | 25.0% |
| ! | TTATTATGATTTATGGGCTT+GGG | - | chr7_4:53361382-53361401 | None:intergenic | 25.0% |
| ! | GAAATTGAATAATGGAAGTG+AGG | - | chr7_4:53359583-53359602 | None:intergenic | 30.0% |
| !!! | ATTTGATGGTTTTATGAGGA+TGG | - | chr7_4:53359655-53359674 | None:intergenic | 30.0% |
| ! | GATTTTCCTTCATCTTTTTG+CGG | - | chr7_4:53359904-53359923 | None:intergenic | 30.0% |
| !! | CCAAGAAAAAGTGTTAATTG+GGG | - | chr7_4:53360079-53360098 | None:intergenic | 30.0% |
| !! | GACCAAGAAAAAGTGTTAAT+TGG | - | chr7_4:53360081-53360100 | None:intergenic | 30.0% |
| TGTGCCAATTCTAATTAACA+AGG | - | chr7_4:53360139-53360158 | None:intergenic | 30.0% | |
| CAAAAGTAGAAAAGTTGTCT+TGG | - | chr7_4:53360433-53360452 | None:intergenic | 30.0% | |
| ! | CTTTTCTATGAAAACTCTAG+AGG | - | chr7_4:53360573-53360592 | None:intergenic | 30.0% |
| TTGATCAATGATATTGTCAG+TGG | + | chr7_4:53360614-53360633 | Msa1162590:CDS | 30.0% | |
| TGAGTCCATGCATATATAAA+TGG | + | chr7_4:53361205-53361224 | Msa1162590:intron | 30.0% | |
| TTAAATGTTACTCTTGCTAG+AGG | - | chr7_4:53361341-53361360 | None:intergenic | 30.0% | |
| CTTATTATGATTTATGGGCT+TGG | - | chr7_4:53361383-53361402 | None:intergenic | 30.0% | |
| AAAGGATGAGAAATGAAACA+AGG | - | chr7_4:53361485-53361504 | None:intergenic | 30.0% | |
| CACAAACCAAGAAAAAAAAC+TGG | - | chr7_4:53361565-53361584 | None:intergenic | 30.0% | |
| ! | AGGTGCAAAATGAAATTTTC+AGG | + | chr7_4:53361608-53361627 | Msa1162590:intron | 30.0% |
| ! | GGTGCAAAATGAAATTTTCA+GGG | + | chr7_4:53361609-53361628 | Msa1162590:intron | 30.0% |
| GAGCAAATTTGAAAAATCCA+GGG | + | chr7_4:53361663-53361682 | Msa1162590:CDS | 30.0% | |
| ! | GAAATTGAATAATGGAAGTG+AGG | - | chr7_4:53359583-53359602 | None:intergenic | 30.0% |
| !!! | ATTTGATGGTTTTATGAGGA+TGG | - | chr7_4:53359655-53359674 | None:intergenic | 30.0% |
| ! | GATTTTCCTTCATCTTTTTG+CGG | - | chr7_4:53359904-53359923 | None:intergenic | 30.0% |
| !! | CCAAGAAAAAGTGTTAATTG+GGG | - | chr7_4:53360079-53360098 | None:intergenic | 30.0% |
| !! | GACCAAGAAAAAGTGTTAAT+TGG | - | chr7_4:53360081-53360100 | None:intergenic | 30.0% |
| TGTGCCAATTCTAATTAACA+AGG | - | chr7_4:53360139-53360158 | None:intergenic | 30.0% | |
| CAAAAGTAGAAAAGTTGTCT+TGG | - | chr7_4:53360433-53360452 | None:intergenic | 30.0% | |
| ! | CTTTTCTATGAAAACTCTAG+AGG | - | chr7_4:53360573-53360592 | None:intergenic | 30.0% |
| TTGATCAATGATATTGTCAG+TGG | + | chr7_4:53360614-53360633 | Msa1162590:CDS | 30.0% | |
| TGAGTCCATGCATATATAAA+TGG | + | chr7_4:53361205-53361224 | Msa1162590:intron | 30.0% | |
| TTAAATGTTACTCTTGCTAG+AGG | - | chr7_4:53361341-53361360 | None:intergenic | 30.0% | |
| CTTATTATGATTTATGGGCT+TGG | - | chr7_4:53361383-53361402 | None:intergenic | 30.0% | |
| AAAGGATGAGAAATGAAACA+AGG | - | chr7_4:53361485-53361504 | None:intergenic | 30.0% | |
| CACAAACCAAGAAAAAAAAC+TGG | - | chr7_4:53361565-53361584 | None:intergenic | 30.0% | |
| ! | AGGTGCAAAATGAAATTTTC+AGG | + | chr7_4:53361608-53361627 | Msa1162590:intron | 30.0% |
| ! | GGTGCAAAATGAAATTTTCA+GGG | + | chr7_4:53361609-53361628 | Msa1162590:intron | 30.0% |
| GAGCAAATTTGAAAAATCCA+GGG | + | chr7_4:53361663-53361682 | Msa1162590:CDS | 30.0% | |
| ! | TGAATAATGGAAGTGAGGTA+AGG | - | chr7_4:53359578-53359597 | None:intergenic | 35.0% |
| TACTGTTACTACTGATGCTA+AGG | + | chr7_4:53359784-53359803 | Msa1162590:CDS | 35.0% | |
| ACGTAACTCTTTCTTCTCAT+TGG | - | chr7_4:53359870-53359889 | None:intergenic | 35.0% | |
| AGAAACAAGTCATCACTCTT+GGG | + | chr7_4:53360034-53360053 | Msa1162590:CDS | 35.0% | |
| !!! | CCCCAATTAACACTTTTTCT+TGG | + | chr7_4:53360076-53360095 | Msa1162590:intron | 35.0% |
| ACTATACTTTGTTGCAGACA+TGG | + | chr7_4:53360528-53360547 | Msa1162590:intron | 35.0% | |
| CATTGATCAAACGCTTATGA+CGG | - | chr7_4:53360604-53360623 | None:intergenic | 35.0% | |
| ACATCAATTAAGAAAGTCGG+TGG | + | chr7_4:53360793-53360812 | Msa1162590:intron | 35.0% | |
| GGAGCAAATTTGAAAAATCC+AGG | + | chr7_4:53361662-53361681 | Msa1162590:CDS | 35.0% | |
| ! | TGAATAATGGAAGTGAGGTA+AGG | - | chr7_4:53359578-53359597 | None:intergenic | 35.0% |
| TACTGTTACTACTGATGCTA+AGG | + | chr7_4:53359784-53359803 | Msa1162590:CDS | 35.0% | |
| ACGTAACTCTTTCTTCTCAT+TGG | - | chr7_4:53359870-53359889 | None:intergenic | 35.0% | |
| AGAAACAAGTCATCACTCTT+GGG | + | chr7_4:53360034-53360053 | Msa1162590:CDS | 35.0% | |
| !!! | CCCCAATTAACACTTTTTCT+TGG | + | chr7_4:53360076-53360095 | Msa1162590:intron | 35.0% |
| ACTATACTTTGTTGCAGACA+TGG | + | chr7_4:53360528-53360547 | Msa1162590:intron | 35.0% | |
| CATTGATCAAACGCTTATGA+CGG | - | chr7_4:53360604-53360623 | None:intergenic | 35.0% | |
| ACATCAATTAAGAAAGTCGG+TGG | + | chr7_4:53360793-53360812 | Msa1162590:intron | 35.0% | |
| GGAGCAAATTTGAAAAATCC+AGG | + | chr7_4:53361662-53361681 | Msa1162590:CDS | 35.0% | |
| !!! | GATGGTTTTATGAGGATGGA+TGG | - | chr7_4:53359651-53359670 | None:intergenic | 40.0% |
| TTTGCTTACTCTCTCTGCAA+TGG | + | chr7_4:53359709-53359728 | Msa1162590:exon | 40.0% | |
| AATCTTCTGATGAGCTACTC+AGG | + | chr7_4:53359825-53359844 | Msa1162590:CDS | 40.0% | |
| CAATCTGAGAGCTCTTCAAA+CGG | + | chr7_4:53359923-53359942 | Msa1162590:CDS | 40.0% | |
| CAGAAACAAGTCATCACTCT+TGG | + | chr7_4:53360033-53360052 | Msa1162590:CDS | 40.0% | |
| AGAATGTTAACCAGTTTCCC+CGG | + | chr7_4:53360322-53360341 | Msa1162590:intron | 40.0% | |
| TAACTGTTTAACCAATGCCC+CGG | - | chr7_4:53360344-53360363 | None:intergenic | 40.0% | |
| ! | GGTCTTATAGTTAGGGACAA+TGG | + | chr7_4:53361024-53361043 | Msa1162590:intron | 40.0% |
| GCACGCCATTTATATATGCA+TGG | - | chr7_4:53361213-53361232 | None:intergenic | 40.0% | |
| CATATATAAATGGCGTGCAG+TGG | + | chr7_4:53361215-53361234 | Msa1162590:intron | 40.0% | |
| CAAGGAAGAAGATGAAACAG+TGG | - | chr7_4:53361467-53361486 | None:intergenic | 40.0% | |
| GGATAGAGCAAAGTGGAAAA+AGG | - | chr7_4:53361503-53361522 | None:intergenic | 40.0% | |
| AAGAACAGGATAGAGCAAAG+TGG | - | chr7_4:53361510-53361529 | None:intergenic | 40.0% | |
| !! | AATTTTCAGGGTGTGCAAAG+TGG | + | chr7_4:53361621-53361640 | Msa1162590:intron | 40.0% |
| !!! | GATGGTTTTATGAGGATGGA+TGG | - | chr7_4:53359651-53359670 | None:intergenic | 40.0% |
| TTTGCTTACTCTCTCTGCAA+TGG | + | chr7_4:53359709-53359728 | Msa1162590:exon | 40.0% | |
| AATCTTCTGATGAGCTACTC+AGG | + | chr7_4:53359825-53359844 | Msa1162590:CDS | 40.0% | |
| CAATCTGAGAGCTCTTCAAA+CGG | + | chr7_4:53359923-53359942 | Msa1162590:CDS | 40.0% | |
| CAGAAACAAGTCATCACTCT+TGG | + | chr7_4:53360033-53360052 | Msa1162590:CDS | 40.0% | |
| AGAATGTTAACCAGTTTCCC+CGG | + | chr7_4:53360322-53360341 | Msa1162590:intron | 40.0% | |
| TAACTGTTTAACCAATGCCC+CGG | - | chr7_4:53360344-53360363 | None:intergenic | 40.0% | |
| ! | GGTCTTATAGTTAGGGACAA+TGG | + | chr7_4:53361024-53361043 | Msa1162590:intron | 40.0% |
| GCACGCCATTTATATATGCA+TGG | - | chr7_4:53361213-53361232 | None:intergenic | 40.0% | |
| CATATATAAATGGCGTGCAG+TGG | + | chr7_4:53361215-53361234 | Msa1162590:intron | 40.0% | |
| CAAGGAAGAAGATGAAACAG+TGG | - | chr7_4:53361467-53361486 | None:intergenic | 40.0% | |
| GGATAGAGCAAAGTGGAAAA+AGG | - | chr7_4:53361503-53361522 | None:intergenic | 40.0% | |
| AAGAACAGGATAGAGCAAAG+TGG | - | chr7_4:53361510-53361529 | None:intergenic | 40.0% | |
| !! | AATTTTCAGGGTGTGCAAAG+TGG | + | chr7_4:53361621-53361640 | Msa1162590:intron | 40.0% |
| AGTAGCAGAAGAAGCAGAAG+TGG | - | chr7_4:53359759-53359778 | None:intergenic | 45.0% | |
| !! | ACTCAGGAAGTTTGCTGAAG+TGG | + | chr7_4:53359841-53359860 | Msa1162590:CDS | 45.0% |
| !! | CTCAGGAAGTTTGCTGAAGT+GGG | + | chr7_4:53359842-53359861 | Msa1162590:CDS | 45.0% |
| CAAACGCCGCAAAAAGATGA+AGG | + | chr7_4:53359895-53359914 | Msa1162590:CDS | 45.0% | |
| ACTCTTGGGAACCATTCACA+AGG | + | chr7_4:53360048-53360067 | Msa1162590:CDS | 45.0% | |
| GAATGTTAACCAGTTTCCCC+GGG | + | chr7_4:53360323-53360342 | Msa1162590:intron | 45.0% | |
| AATGTTAACCAGTTTCCCCG+GGG | + | chr7_4:53360324-53360343 | Msa1162590:intron | 45.0% | |
| AACTGTTTAACCAATGCCCC+GGG | - | chr7_4:53360343-53360362 | None:intergenic | 45.0% | |
| ACATGGCGTAGAACTGTAGA+AGG | + | chr7_4:53360545-53360564 | Msa1162590:CDS | 45.0% | |
| ATATTGTCAGTGGCGTATCC+AGG | + | chr7_4:53360624-53360643 | Msa1162590:CDS | 45.0% | |
| GGAAGAAGATGAAACAGTGG+CGG | - | chr7_4:53361464-53361483 | None:intergenic | 45.0% | |
| GTGTCGCACAATAGAAGAAC+AGG | - | chr7_4:53361524-53361543 | None:intergenic | 45.0% | |
| ! | TGGTTTGTGAGAGCAAGAGT+TGG | + | chr7_4:53361576-53361595 | Msa1162590:intron | 45.0% |
| TTGAAAAATCCAGGGTGTGC+AGG | + | chr7_4:53361671-53361690 | Msa1162590:CDS | 45.0% | |
| TGAAAAATCCAGGGTGTGCA+GGG | + | chr7_4:53361672-53361691 | Msa1162590:CDS | 45.0% | |
| AGTAGCAGAAGAAGCAGAAG+TGG | - | chr7_4:53359759-53359778 | None:intergenic | 45.0% | |
| !! | ACTCAGGAAGTTTGCTGAAG+TGG | + | chr7_4:53359841-53359860 | Msa1162590:CDS | 45.0% |
| !! | CTCAGGAAGTTTGCTGAAGT+GGG | + | chr7_4:53359842-53359861 | Msa1162590:CDS | 45.0% |
| CAAACGCCGCAAAAAGATGA+AGG | + | chr7_4:53359895-53359914 | Msa1162590:CDS | 45.0% | |
| ACTCTTGGGAACCATTCACA+AGG | + | chr7_4:53360048-53360067 | Msa1162590:CDS | 45.0% | |
| GAATGTTAACCAGTTTCCCC+GGG | + | chr7_4:53360323-53360342 | Msa1162590:intron | 45.0% | |
| AATGTTAACCAGTTTCCCCG+GGG | + | chr7_4:53360324-53360343 | Msa1162590:intron | 45.0% | |
| AACTGTTTAACCAATGCCCC+GGG | - | chr7_4:53360343-53360362 | None:intergenic | 45.0% | |
| ACATGGCGTAGAACTGTAGA+AGG | + | chr7_4:53360545-53360564 | Msa1162590:CDS | 45.0% | |
| ATATTGTCAGTGGCGTATCC+AGG | + | chr7_4:53360624-53360643 | Msa1162590:CDS | 45.0% | |
| GGAAGAAGATGAAACAGTGG+CGG | - | chr7_4:53361464-53361483 | None:intergenic | 45.0% | |
| GTGTCGCACAATAGAAGAAC+AGG | - | chr7_4:53361524-53361543 | None:intergenic | 45.0% | |
| ! | TGGTTTGTGAGAGCAAGAGT+TGG | + | chr7_4:53361576-53361595 | Msa1162590:intron | 45.0% |
| TTGAAAAATCCAGGGTGTGC+AGG | + | chr7_4:53361671-53361690 | Msa1162590:CDS | 45.0% | |
| TGAAAAATCCAGGGTGTGCA+GGG | + | chr7_4:53361672-53361691 | Msa1162590:CDS | 45.0% | |
| GAGGATGGATGGACCGTTAT+AGG | - | chr7_4:53359640-53359659 | None:intergenic | 50.0% | |
| AAGCGACCTCCTTTCCACAA+CGG | - | chr7_4:53359957-53359976 | None:intergenic | 50.0% | |
| !!! | GGAAAGGAGGTCGCTTTTAC+CGG | + | chr7_4:53359961-53359980 | Msa1162590:CDS | 50.0% |
| ! | TTTTACCGGCAACAGTGAGC+CGG | + | chr7_4:53359975-53359994 | Msa1162590:CDS | 50.0% |
| TATCTCTAACCCTGAGCTGC+CGG | - | chr7_4:53360012-53360031 | None:intergenic | 50.0% | |
| TTGGGGTCTCACCTTGTGAA+TGG | - | chr7_4:53360062-53360081 | None:intergenic | 50.0% | |
| ACTGTTTAACCAATGCCCCG+GGG | - | chr7_4:53360342-53360361 | None:intergenic | 50.0% | |
| AATTTGCACCCCCTGACCTA+GGG | - | chr7_4:53360651-53360670 | None:intergenic | 50.0% | |
| AAATTTGCACCCCCTGACCT+AGG | - | chr7_4:53360652-53360671 | None:intergenic | 50.0% | |
| ! | GCAAGAGTTGGTCAGATCAG+AGG | + | chr7_4:53361588-53361607 | Msa1162590:intron | 50.0% |
| GAAAAATCCAGGGTGTGCAG+GGG | + | chr7_4:53361673-53361692 | Msa1162590:CDS | 50.0% | |
| GCGGATCTACACTTGGTTGA+GGG | - | chr7_4:53361703-53361722 | None:intergenic | 50.0% | |
| CGCCCCTGGATATTGTTTAG+CGG | + | chr7_4:53361720-53361739 | Msa1162590:CDS | 50.0% | |
| GAGGATGGATGGACCGTTAT+AGG | - | chr7_4:53359640-53359659 | None:intergenic | 50.0% | |
| AAGCGACCTCCTTTCCACAA+CGG | - | chr7_4:53359957-53359976 | None:intergenic | 50.0% | |
| !!! | GGAAAGGAGGTCGCTTTTAC+CGG | + | chr7_4:53359961-53359980 | Msa1162590:CDS | 50.0% |
| ! | TTTTACCGGCAACAGTGAGC+CGG | + | chr7_4:53359975-53359994 | Msa1162590:CDS | 50.0% |
| TATCTCTAACCCTGAGCTGC+CGG | - | chr7_4:53360012-53360031 | None:intergenic | 50.0% | |
| TTGGGGTCTCACCTTGTGAA+TGG | - | chr7_4:53360062-53360081 | None:intergenic | 50.0% | |
| ACTGTTTAACCAATGCCCCG+GGG | - | chr7_4:53360342-53360361 | None:intergenic | 50.0% | |
| AATTTGCACCCCCTGACCTA+GGG | - | chr7_4:53360651-53360670 | None:intergenic | 50.0% | |
| AAATTTGCACCCCCTGACCT+AGG | - | chr7_4:53360652-53360671 | None:intergenic | 50.0% | |
| ! | GCAAGAGTTGGTCAGATCAG+AGG | + | chr7_4:53361588-53361607 | Msa1162590:intron | 50.0% |
| GAAAAATCCAGGGTGTGCAG+GGG | + | chr7_4:53361673-53361692 | Msa1162590:CDS | 50.0% | |
| GCGGATCTACACTTGGTTGA+GGG | - | chr7_4:53361703-53361722 | None:intergenic | 50.0% | |
| GTATCCAGGACCCTAGGTCA+GGG | + | chr7_4:53360638-53360657 | Msa1162590:intron | 55.0% | |
| TATCCAGGACCCTAGGTCAG+GGG | + | chr7_4:53360639-53360658 | Msa1162590:intron | 55.0% | |
| GGCGGATCTACACTTGGTTG+AGG | - | chr7_4:53361704-53361723 | None:intergenic | 55.0% | |
| GTATCCAGGACCCTAGGTCA+GGG | + | chr7_4:53360638-53360657 | Msa1162590:intron | 55.0% | |
| TATCCAGGACCCTAGGTCAG+GGG | + | chr7_4:53360639-53360658 | Msa1162590:intron | 55.0% | |
| GGCGGATCTACACTTGGTTG+AGG | - | chr7_4:53361704-53361723 | None:intergenic | 55.0% | |
| AAACGGCACCACTGCCGTTG+TGG | + | chr7_4:53359940-53359959 | Msa1162590:CDS | 60.0% | |
| GCACCACTGCCGTTGTGGAA+AGG | + | chr7_4:53359945-53359964 | Msa1162590:CDS | 60.0% | |
| CCTCCTTTCCACAACGGCAG+TGG | - | chr7_4:53359951-53359970 | None:intergenic | 60.0% | |
| CCACTGCCGTTGTGGAAAGG+AGG | + | chr7_4:53359948-53359967 | Msa1162590:CDS | 60.0% | |
| GACTTCCGGCTCACTGTTGC+CGG | - | chr7_4:53359983-53360002 | None:intergenic | 60.0% | |
| TGAGCCGGAAGTCAGTGCTC+CGG | + | chr7_4:53359990-53360009 | Msa1162590:CDS | 60.0% | |
| AACCAGTTTCCCCGGGGCAT+TGG | + | chr7_4:53360330-53360349 | Msa1162590:intron | 60.0% | |
| AACCAATGCCCCGGGGAAAC+TGG | - | chr7_4:53360335-53360354 | None:intergenic | 60.0% | |
| AGTGGCGTATCCAGGACCCT+AGG | + | chr7_4:53360632-53360651 | Msa1162590:CDS | 60.0% | |
| CGTATCCAGGACCCTAGGTC+AGG | + | chr7_4:53360637-53360656 | Msa1162590:intron | 60.0% | |
| ATCCAGGACCCTAGGTCAGG+GGG | + | chr7_4:53360640-53360659 | Msa1162590:intron | 60.0% | |
| ACCAAGTGTAGATCCGCCCC+TGG | + | chr7_4:53361706-53361725 | Msa1162590:CDS | 60.0% | |
| TCCAGGGGCGGATCTACACT+TGG | - | chr7_4:53361710-53361729 | None:intergenic | 60.0% | |
| AAACGGCACCACTGCCGTTG+TGG | + | chr7_4:53359940-53359959 | Msa1162590:CDS | 60.0% | |
| GCACCACTGCCGTTGTGGAA+AGG | + | chr7_4:53359945-53359964 | Msa1162590:CDS | 60.0% | |
| CCTCCTTTCCACAACGGCAG+TGG | - | chr7_4:53359951-53359970 | None:intergenic | 60.0% | |
| CCACTGCCGTTGTGGAAAGG+AGG | + | chr7_4:53359948-53359967 | Msa1162590:CDS | 60.0% | |
| GACTTCCGGCTCACTGTTGC+CGG | - | chr7_4:53359983-53360002 | None:intergenic | 60.0% | |
| TGAGCCGGAAGTCAGTGCTC+CGG | + | chr7_4:53359990-53360009 | Msa1162590:CDS | 60.0% | |
| AACCAGTTTCCCCGGGGCAT+TGG | + | chr7_4:53360330-53360349 | Msa1162590:intron | 60.0% | |
| AACCAATGCCCCGGGGAAAC+TGG | - | chr7_4:53360335-53360354 | None:intergenic | 60.0% | |
| AGTGGCGTATCCAGGACCCT+AGG | + | chr7_4:53360632-53360651 | Msa1162590:CDS | 60.0% | |
| CGTATCCAGGACCCTAGGTC+AGG | + | chr7_4:53360637-53360656 | Msa1162590:intron | 60.0% | |
| ATCCAGGACCCTAGGTCAGG+GGG | + | chr7_4:53360640-53360659 | Msa1162590:intron | 60.0% | |
| ACCAAGTGTAGATCCGCCCC+TGG | + | chr7_4:53361706-53361725 | Msa1162590:CDS | 60.0% | |
| TCCAGGGGCGGATCTACACT+TGG | - | chr7_4:53361710-53361729 | None:intergenic | 60.0% | |
| !! | GCTGCCGGAGCACTGACTTC+CGG | - | chr7_4:53359997-53360016 | None:intergenic | 65.0% |
| AGTCAGTGCTCCGGCAGCTC+AGG | + | chr7_4:53359999-53360018 | Msa1162590:CDS | 65.0% | |
| GTCAGTGCTCCGGCAGCTCA+GGG | + | chr7_4:53360000-53360019 | Msa1162590:CDS | 65.0% | |
| !! | GCTGCCGGAGCACTGACTTC+CGG | - | chr7_4:53359997-53360016 | None:intergenic | 65.0% |
| AGTCAGTGCTCCGGCAGCTC+AGG | + | chr7_4:53359999-53360018 | Msa1162590:CDS | 65.0% | |
| GTCAGTGCTCCGGCAGCTCA+GGG | + | chr7_4:53360000-53360019 | Msa1162590:CDS | 65.0% | |
| CACCCCCTGACCTAGGGTCC+TGG | - | chr7_4:53360645-53360664 | None:intergenic | 70.0% | |
| CACCCCCTGACCTAGGGTCC+TGG | - | chr7_4:53360645-53360664 | None:intergenic | 70.0% | |
| GGGTGTGCCCCTGCACACCC+TGG | - | chr7_4:53361683-53361702 | None:intergenic | 75.0% | |
| GGGTGTGCCCCTGCACACCC+TGG | - | chr7_4:53361683-53361702 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 53359564 | 53361739 | 53359564 | ID=Msa1162590;Name=Msa1162590 |
| chr7_4 | mRNA | 53359564 | 53361739 | 53359564 | ID=Msa1162590-mRNA-1;Parent=Msa1162590;Name=Msa1162590-mRNA-1;_AED=0.23;_eAED=0.23;_QI=164|0.5|0.33|0.66|1|1|3|0|186 |
| chr7_4 | exon | 53359564 | 53360069 | 53359564 | ID=Msa1162590-mRNA-1:exon:15414;Parent=Msa1162590-mRNA-1 |
| chr7_4 | exon | 53360545 | 53360653 | 53360545 | ID=Msa1162590-mRNA-1:exon:15415;Parent=Msa1162590-mRNA-1 |
| chr7_4 | exon | 53361630 | 53361739 | 53361630 | ID=Msa1162590-mRNA-1:exon:15416;Parent=Msa1162590-mRNA-1 |
| chr7_4 | five_prime_UTR | 53359564 | 53359727 | 53359564 | ID=Msa1162590-mRNA-1:five_prime_utr;Parent=Msa1162590-mRNA-1 |
| chr7_4 | CDS | 53359728 | 53360069 | 53359728 | ID=Msa1162590-mRNA-1:cds;Parent=Msa1162590-mRNA-1 |
| chr7_4 | CDS | 53360545 | 53360653 | 53360545 | ID=Msa1162590-mRNA-1:cds;Parent=Msa1162590-mRNA-1 |
| chr7_4 | CDS | 53361630 | 53361739 | 53361630 | ID=Msa1162590-mRNA-1:cds;Parent=Msa1162590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
