Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173730 | sp|Q9M115|ZDH16_ARATH | 63.230 | 514 | 170 | 9 | 2 | 505 | 4 | 508 | 0.0 | 542 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173730 | G7IBQ1 | 98.416 | 505 | 8 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1017 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0173730 | 0.804117 | 2.519256e-49 | -8.615850e-47 |
| Msa0005890 | Msa0173730 | 0.838467 | 2.827293e-57 | -8.615850e-47 |
| Msa0021500 | Msa0173730 | 0.812745 | 3.632573e-51 | -8.615850e-47 |
| Msa0028420 | Msa0173730 | 0.836966 | 6.862444e-57 | -8.615850e-47 |
| Msa0030370 | Msa0173730 | 0.949187 | 2.113474e-107 | -8.615850e-47 |
| Msa0036870 | Msa0173730 | 0.802489 | 5.475035e-49 | -8.615850e-47 |
| Msa0048510 | Msa0173730 | 0.834611 | 2.712475e-56 | -8.615850e-47 |
| Msa0049760 | Msa0173730 | 0.810717 | 1.003042e-50 | -8.615850e-47 |
| Msa0052480 | Msa0173730 | 0.821805 | 3.320956e-53 | -8.615850e-47 |
| Msa0054690 | Msa0173730 | 0.820128 | 8.077245e-53 | -8.615850e-47 |
| Msa0081520 | Msa0173730 | 0.816209 | 6.223666e-52 | -8.615850e-47 |
| Msa0081570 | Msa0173730 | 0.939092 | 2.268306e-99 | -8.615850e-47 |
| Msa0090400 | Msa0173730 | 0.819185 | 1.326573e-52 | -8.615850e-47 |
| Msa0092790 | Msa0173730 | 0.816226 | 6.167257e-52 | -8.615850e-47 |
| Msa0094780 | Msa0173730 | 0.836544 | 8.793170e-57 | -8.615850e-47 |
| Msa0097670 | Msa0173730 | 0.805400 | 1.359782e-49 | -8.615850e-47 |
| Msa0097890 | Msa0173730 | 0.805862 | 1.087265e-49 | -8.615850e-47 |
| Msa0124280 | Msa0173730 | 0.822638 | 2.128619e-53 | -8.615850e-47 |
| Msa0136650 | Msa0173730 | 0.830200 | 3.356722e-55 | -8.615850e-47 |
| Msa0137880 | Msa0173730 | 0.812936 | 3.298614e-51 | -8.615850e-47 |
| Msa0140280 | Msa0173730 | 0.803759 | 2.990025e-49 | -8.615850e-47 |
| Msa0168500 | Msa0173730 | 0.813987 | 1.937748e-51 | -8.615850e-47 |
| Msa0173730 | Msa0173810 | 0.964989 | 5.007941e-124 | -8.615850e-47 |
| Msa0173730 | Msa0174450 | 0.824589 | 7.438635e-54 | -8.615850e-47 |
| Msa0173730 | Msa0182190 | 0.820663 | 6.089624e-53 | -8.615850e-47 |
| Msa0173730 | Msa0182240 | 0.820527 | 6.542485e-53 | -8.615850e-47 |
| Msa0173730 | Msa0190570 | 0.842698 | 2.206207e-58 | -8.615850e-47 |
| Msa0173730 | Msa0200050 | 0.830624 | 2.644979e-55 | -8.615850e-47 |
| Msa0173730 | Msa0213030 | 0.816483 | 5.403150e-52 | -8.615850e-47 |
| Msa0173730 | Msa0221000 | 0.802834 | 4.648314e-49 | -8.615850e-47 |
| Msa0173730 | Msa0222560 | 0.813126 | 2.996976e-51 | -8.615850e-47 |
| Msa0173730 | Msa0223210 | 0.807559 | 4.764383e-50 | -8.615850e-47 |
| Msa0173730 | Msa0225860 | 0.865582 | 5.320797e-65 | -8.615850e-47 |
| Msa0173730 | Msa0242590 | 0.847238 | 1.311940e-59 | -8.615850e-47 |
| Msa0173730 | Msa0260510 | 0.850742 | 1.394645e-60 | -8.615850e-47 |
| Msa0173730 | Msa0267110 | 0.819499 | 1.124546e-52 | -8.615850e-47 |
| Msa0173730 | Msa0280790 | 0.834978 | 2.192248e-56 | -8.615850e-47 |
| Msa0173730 | Msa0287740 | 0.804068 | 2.579002e-49 | -8.615850e-47 |
| Msa0173730 | Msa0292400 | 0.810940 | 8.979463e-51 | -8.615850e-47 |
| Msa0173730 | Msa0298470 | 0.852681 | 3.935653e-61 | -8.615850e-47 |
| Msa0173730 | Msa0298500 | 0.806219 | 9.148513e-50 | -8.615850e-47 |
| Msa0173730 | Msa0300270 | 0.808779 | 2.618425e-50 | -8.615850e-47 |
| Msa0173730 | Msa0330380 | 0.820254 | 7.559853e-53 | -8.615850e-47 |
| Msa0173730 | Msa0337700 | 0.817073 | 3.984437e-52 | -8.615850e-47 |
| Msa0173730 | Msa0339650 | 0.805788 | 1.127282e-49 | -8.615850e-47 |
| Msa0173730 | Msa0340500 | 0.878617 | 2.429988e-69 | -8.615850e-47 |
| Msa0173730 | Msa0369790 | 0.816150 | 6.413573e-52 | -8.615850e-47 |
| Msa0173730 | Msa0371030 | 0.809153 | 2.178413e-50 | -8.615850e-47 |
| Msa0173730 | Msa0378720 | 0.815900 | 7.294366e-52 | -8.615850e-47 |
| Msa0173730 | Msa0380620 | 0.816903 | 4.349225e-52 | -8.615850e-47 |
| Msa0173730 | Msa0380670 | 0.801214 | 1.000875e-48 | -8.615850e-47 |
| Msa0173730 | Msa0390970 | 0.825964 | 3.516549e-54 | -8.615850e-47 |
| Msa0173730 | Msa0428370 | 0.813303 | 2.740454e-51 | -8.615850e-47 |
| Msa0173730 | Msa0430260 | 0.828472 | 8.821640e-55 | -8.615850e-47 |
| Msa0173730 | Msa0430300 | 0.810635 | 1.044834e-50 | -8.615850e-47 |
| Msa0173730 | Msa0440500 | 0.803339 | 3.654119e-49 | -8.615850e-47 |
| Msa0173730 | Msa0464000 | 0.813793 | 2.137942e-51 | -8.615850e-47 |
| Msa0173730 | Msa0474730 | 0.811882 | 5.604447e-51 | -8.615850e-47 |
| Msa0173730 | Msa0481890 | 0.814744 | 1.318181e-51 | -8.615850e-47 |
| Msa0173730 | Msa0483100 | 0.825089 | 5.667954e-54 | -8.615850e-47 |
| Msa0173730 | Msa0484380 | 0.800584 | 1.345668e-48 | -8.615850e-47 |
| Msa0173730 | Msa0500380 | 0.813502 | 2.477858e-51 | -8.615850e-47 |
| Msa0173730 | Msa0509550 | 0.810565 | 1.081900e-50 | -8.615850e-47 |
| Msa0173730 | Msa0530780 | 0.822422 | 2.389475e-53 | -8.615850e-47 |
| Msa0173730 | Msa0532070 | 0.813821 | 2.107642e-51 | -8.615850e-47 |
| Msa0173730 | Msa0534720 | 0.811817 | 5.792044e-51 | -8.615850e-47 |
| Msa0173730 | Msa0548470 | 0.801468 | 8.878923e-49 | -8.615850e-47 |
| Msa0173730 | Msa0567170 | 0.856791 | 2.533956e-62 | -8.615850e-47 |
| Msa0173730 | Msa0569200 | 0.811204 | 7.869752e-51 | -8.615850e-47 |
| Msa0173730 | Msa0573850 | 0.802435 | 5.618864e-49 | -8.615850e-47 |
| Msa0173730 | Msa0580370 | 0.863085 | 3.200898e-64 | -8.615850e-47 |
| Msa0173730 | Msa0583830 | 0.800081 | 1.703561e-48 | -8.615850e-47 |
| Msa0173730 | Msa0590830 | 0.812266 | 4.621808e-51 | -8.615850e-47 |
| Msa0173730 | Msa0594310 | 0.805958 | 1.038232e-49 | -8.615850e-47 |
| Msa0173730 | Msa0597790 | 0.810870 | 9.298452e-51 | -8.615850e-47 |
| Msa0173730 | Msa0608330 | 0.828574 | 8.335757e-55 | -8.615850e-47 |
| Msa0173730 | Msa0624900 | 0.846288 | 2.386423e-59 | -8.615850e-47 |
| Msa0173730 | Msa0626450 | 0.823142 | 1.624363e-53 | -8.615850e-47 |
| Msa0173730 | Msa0626490 | 0.819900 | 9.108870e-53 | -8.615850e-47 |
| Msa0173730 | Msa0658640 | 0.861031 | 1.364911e-63 | -8.615850e-47 |
| Msa0173730 | Msa0661150 | 0.816876 | 4.411825e-52 | -8.615850e-47 |
| Msa0173730 | Msa0664600 | 0.822776 | 1.976252e-53 | -8.615850e-47 |
| Msa0173730 | Msa0666700 | 0.828401 | 9.176287e-55 | -8.615850e-47 |
| Msa0173730 | Msa0683570 | 0.820282 | 7.449875e-53 | -8.615850e-47 |
| Msa0173730 | Msa0703600 | 0.839253 | 1.769455e-57 | -8.615850e-47 |
| Msa0173730 | Msa0709200 | 0.840824 | 6.889769e-58 | -8.615850e-47 |
| Msa0173730 | Msa0709440 | 0.814687 | 1.356710e-51 | -8.615850e-47 |
| Msa0173730 | Msa0721080 | 0.821662 | 3.584153e-53 | -8.615850e-47 |
| Msa0173730 | Msa0725770 | 0.804596 | 2.001951e-49 | -8.615850e-47 |
| Msa0173730 | Msa0735780 | 0.838657 | 2.525396e-57 | -8.615850e-47 |
| Msa0173730 | Msa0741220 | 0.811778 | 5.904365e-51 | -8.615850e-47 |
| Msa0173730 | Msa0749890 | 0.809903 | 1.503363e-50 | -8.615850e-47 |
| Msa0173730 | Msa0756590 | 0.813560 | 2.406163e-51 | -8.615850e-47 |
| Msa0173730 | Msa0761670 | 0.808079 | 3.694090e-50 | -8.615850e-47 |
| Msa0173730 | Msa0768990 | 0.803269 | 3.778990e-49 | -8.615850e-47 |
| Msa0173730 | Msa0773630 | 0.804982 | 1.662758e-49 | -8.615850e-47 |
| Msa0173730 | Msa0777750 | 0.831255 | 1.851817e-55 | -8.615850e-47 |
| Msa0173730 | Msa0795870 | 0.861371 | 1.075432e-63 | -8.615850e-47 |
| Msa0173730 | Msa0815920 | 0.822158 | 2.751836e-53 | -8.615850e-47 |
| Msa0173730 | Msa0824450 | 0.849180 | 3.814862e-60 | -8.615850e-47 |
| Msa0173730 | Msa0830130 | 0.816721 | 4.779103e-52 | -8.615850e-47 |
| Msa0173730 | Msa0830460 | 0.822538 | 2.245271e-53 | -8.615850e-47 |
| Msa0173730 | Msa0833650 | 0.860558 | 1.899936e-63 | -8.615850e-47 |
| Msa0173730 | Msa0835490 | 0.800159 | 1.642887e-48 | -8.615850e-47 |
| Msa0173730 | Msa0842070 | 0.801063 | 1.074552e-48 | -8.615850e-47 |
| Msa0173730 | Msa0861510 | 0.819103 | 1.384388e-52 | -8.615850e-47 |
| Msa0173730 | Msa0861600 | 0.826612 | 2.465976e-54 | -8.615850e-47 |
| Msa0173730 | Msa0869780 | 0.807661 | 4.532863e-50 | -8.615850e-47 |
| Msa0173730 | Msa0873730 | 0.819926 | 8.984824e-53 | -8.615850e-47 |
| Msa0173730 | Msa0915520 | 0.803372 | 3.597585e-49 | -8.615850e-47 |
| Msa0173730 | Msa0938820 | 0.814702 | 1.346707e-51 | -8.615850e-47 |
| Msa0173730 | Msa0966320 | 0.800136 | 1.660186e-48 | -8.615850e-47 |
| Msa0173730 | Msa0967870 | 0.802743 | 4.854027e-49 | -8.615850e-47 |
| Msa0173730 | Msa0981320 | 0.825872 | 3.698258e-54 | -8.615850e-47 |
| Msa0173730 | Msa0997920 | 0.841870 | 3.656063e-58 | -8.615850e-47 |
| Msa0173730 | Msa1001740 | 0.818146 | 2.282451e-52 | -8.615850e-47 |
| Msa0173730 | Msa1019430 | 0.807615 | 4.635389e-50 | -8.615850e-47 |
| Msa0173730 | Msa1042190 | 0.804715 | 1.891151e-49 | -8.615850e-47 |
| Msa0173730 | Msa1045140 | 0.814193 | 1.744871e-51 | -8.615850e-47 |
| Msa0173730 | Msa1084530 | 0.815178 | 1.055972e-51 | -8.615850e-47 |
| Msa0173730 | Msa1096960 | 0.802183 | 6.332018e-49 | -8.615850e-47 |
| Msa0173730 | Msa1116220 | 0.801254 | 9.819383e-49 | -8.615850e-47 |
| Msa0173730 | Msa1125820 | 0.813004 | 3.186831e-51 | -8.615850e-47 |
| Msa0173730 | Msa1125990 | 0.816277 | 6.007084e-52 | -8.615850e-47 |
| Msa0173730 | Msa1132530 | 0.805157 | 1.528919e-49 | -8.615850e-47 |
| Msa0173730 | Msa1132840 | 0.863630 | 2.171064e-64 | -8.615850e-47 |
| Msa0173730 | Msa1155170 | -0.806163 | 9.401831e-50 | -8.615850e-47 |
| Msa0173730 | Msa1162590 | 0.824995 | 5.965507e-54 | -8.615850e-47 |
| Msa0173730 | Msa1171290 | 0.811172 | 7.996700e-51 | -8.615850e-47 |
| Msa0173730 | Msa1177320 | 0.811513 | 6.743328e-51 | -8.615850e-47 |
| Msa0173730 | Msa1192570 | 0.838843 | 2.260761e-57 | -8.615850e-47 |
| Msa0173730 | Msa1200890 | 0.813603 | 2.354522e-51 | -8.615850e-47 |
| Msa0173730 | Msa1208950 | 0.832525 | 8.993962e-56 | -8.615850e-47 |
| Msa0173730 | Msa1215870 | 0.828396 | 9.204394e-55 | -8.615850e-47 |
| Msa0173730 | Msa1217210 | 0.802987 | 4.321925e-49 | -8.615850e-47 |
| Msa0173730 | Msa1224930 | 0.813851 | 2.076703e-51 | -8.615850e-47 |
| Msa0173730 | Msa1226520 | 0.858899 | 6.000740e-63 | -8.615850e-47 |
| Msa0173730 | Msa1228200 | 0.800185 | 1.622971e-48 | -8.615850e-47 |
| Msa0173730 | Msa1307630 | 0.805816 | 1.112181e-49 | -8.615850e-47 |
| Msa0173730 | Msa1320670 | 0.822065 | 2.891129e-53 | -8.615850e-47 |
| Msa0173730 | Msa1343170 | 0.826989 | 2.003663e-54 | -8.615850e-47 |
| Msa0173730 | Msa1343180 | 0.838380 | 2.976656e-57 | -8.615850e-47 |
| Msa0173730 | Msa1359690 | 0.828367 | 9.353376e-55 | -8.615850e-47 |
| Msa0173730 | Msa1369150 | 0.805246 | 1.464660e-49 | -8.615850e-47 |
| Msa0173730 | Msa1395190 | 0.804297 | 2.310852e-49 | -8.615850e-47 |
| Msa0173730 | Msa1396030 | 0.811304 | 7.485292e-51 | -8.615850e-47 |
| Msa0173730 | Msa1397400 | 0.863042 | 3.300677e-64 | -8.615850e-47 |
| Msa0173730 | Msa1420950 | 0.855345 | 6.715391e-62 | -8.615850e-47 |
| Msa0173730 | Msa1427200 | 0.810638 | 1.043265e-50 | -8.615850e-47 |
| Msa0173730 | Msa1437930 | 0.802720 | 4.907421e-49 | -8.615850e-47 |
| Msa0173730 | Msa1440880 | 0.813932 | 1.992825e-51 | -8.615850e-47 |
| Msa0173730 | Msa1440960 | 0.822904 | 1.845672e-53 | -8.615850e-47 |
| Msa0173730 | Msa1446810 | 0.813035 | 3.138661e-51 | -8.615850e-47 |
| Msa0173730 | Msa1454140 | 0.801004 | 1.104735e-48 | -8.615850e-47 |
| Msa0173730 | Msa1465440 | 0.803903 | 2.791085e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173730 | MtrunA17_Chr1g0193941 | 98.416 | 505 | 8 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1017 |
| Msa0173730 | MtrunA17_Chr3g0144181 | 34.937 | 395 | 235 | 7 | 2 | 393 | 3 | 378 | 1.08e-68 | 232 |
| Msa0173730 | MtrunA17_Chr4g0038841 | 37.346 | 324 | 175 | 5 | 1 | 298 | 2 | 323 | 1.74e-67 | 231 |
| Msa0173730 | MtrunA17_Chr4g0042821 | 27.787 | 583 | 313 | 12 | 1 | 490 | 1 | 568 | 1.98e-62 | 214 |
| Msa0173730 | MtrunA17_Chr5g0418141 | 31.368 | 475 | 246 | 13 | 1 | 421 | 1 | 449 | 3.83e-57 | 200 |
| Msa0173730 | MtrunA17_Chr6g0462021 | 27.363 | 201 | 122 | 5 | 155 | 344 | 149 | 336 | 1.97e-14 | 75.5 |
| Msa0173730 | MtrunA17_Chr4g0064931 | 40.909 | 88 | 46 | 2 | 139 | 220 | 353 | 440 | 4.46e-14 | 75.1 |
| Msa0173730 | MtrunA17_Chr7g0273371 | 28.070 | 228 | 139 | 7 | 114 | 328 | 127 | 342 | 2.50e-13 | 71.6 |
| Msa0173730 | MtrunA17_Chr6g0464751 | 30.075 | 133 | 83 | 3 | 155 | 287 | 138 | 260 | 3.52e-12 | 68.2 |
| Msa0173730 | MtrunA17_Chr1g0201631 | 30.075 | 133 | 84 | 3 | 155 | 287 | 135 | 258 | 3.76e-12 | 68.2 |
| Msa0173730 | MtrunA17_Chr3g0131931 | 28.571 | 133 | 85 | 3 | 155 | 287 | 150 | 272 | 5.34e-12 | 67.8 |
| Msa0173730 | MtrunA17_Chr4g0009911 | 26.816 | 179 | 100 | 5 | 141 | 305 | 87 | 248 | 5.55e-12 | 66.6 |
| Msa0173730 | MtrunA17_Chr4g0049351 | 39.796 | 98 | 51 | 4 | 157 | 251 | 363 | 455 | 6.28e-12 | 67.8 |
| Msa0173730 | MtrunA17_Chr7g0255151 | 27.068 | 133 | 81 | 2 | 155 | 287 | 162 | 278 | 1.99e-11 | 66.2 |
| Msa0173730 | MtrunA17_Chr7g0251761 | 29.545 | 132 | 81 | 3 | 157 | 287 | 151 | 271 | 2.42e-11 | 65.9 |
| Msa0173730 | MtrunA17_Chr1g0199411 | 33.824 | 136 | 70 | 5 | 169 | 303 | 108 | 224 | 4.26e-11 | 63.5 |
| Msa0173730 | MtrunA17_Chr5g0406311 | 42.373 | 59 | 34 | 0 | 158 | 216 | 170 | 228 | 5.60e-11 | 63.9 |
| Msa0173730 | MtrunA17_Chr1g0211241 | 45.000 | 60 | 33 | 0 | 157 | 216 | 462 | 521 | 6.61e-11 | 64.7 |
| Msa0173730 | MtrunA17_Chr7g0255161 | 27.407 | 135 | 89 | 2 | 155 | 287 | 89 | 216 | 7.29e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173730 | AT4G01730.1 | 63.230 | 514 | 170 | 9 | 2 | 505 | 4 | 508 | 0.0 | 542 |
| Msa0173730 | AT2G33640.1 | 34.750 | 400 | 209 | 9 | 2 | 370 | 3 | 381 | 4.08e-71 | 237 |
| Msa0173730 | AT3G22180.1 | 36.170 | 329 | 179 | 5 | 1 | 306 | 2 | 322 | 4.20e-65 | 224 |
| Msa0173730 | AT4G15080.2 | 31.743 | 482 | 253 | 11 | 1 | 425 | 2 | 464 | 2.26e-64 | 222 |
| Msa0173730 | AT4G15080.1 | 31.743 | 482 | 253 | 11 | 1 | 425 | 2 | 464 | 2.26e-64 | 222 |
| Msa0173730 | AT1G69420.1 | 32.075 | 424 | 232 | 11 | 1 | 385 | 1 | 407 | 1.19e-61 | 212 |
| Msa0173730 | AT1G69420.2 | 32.075 | 424 | 232 | 11 | 1 | 385 | 1 | 407 | 1.19e-61 | 212 |
| Msa0173730 | AT3G26935.1 | 32.090 | 134 | 79 | 3 | 155 | 287 | 148 | 270 | 1.52e-15 | 79.3 |
| Msa0173730 | AT3G48760.1 | 27.228 | 202 | 128 | 5 | 155 | 348 | 157 | 347 | 6.54e-15 | 77.4 |
| Msa0173730 | AT5G20350.1 | 36.154 | 130 | 74 | 4 | 92 | 221 | 316 | 436 | 1.10e-13 | 73.9 |
| Msa0173730 | AT5G41060.3 | 29.851 | 134 | 82 | 3 | 155 | 287 | 79 | 201 | 2.46e-13 | 71.6 |
| Msa0173730 | AT5G41060.4 | 29.851 | 134 | 82 | 3 | 155 | 287 | 79 | 201 | 2.46e-13 | 71.6 |
| Msa0173730 | AT3G04970.3 | 42.105 | 76 | 39 | 2 | 153 | 224 | 66 | 140 | 2.78e-13 | 71.2 |
| Msa0173730 | AT2G14255.1 | 43.836 | 73 | 41 | 0 | 148 | 220 | 355 | 427 | 2.80e-13 | 72.8 |
| Msa0173730 | AT5G41060.1 | 29.851 | 134 | 82 | 3 | 155 | 287 | 146 | 268 | 4.61e-13 | 71.2 |
| Msa0173730 | AT3G56930.1 | 28.148 | 135 | 83 | 3 | 155 | 287 | 145 | 267 | 5.03e-13 | 71.6 |
| Msa0173730 | AT5G41060.2 | 29.851 | 134 | 82 | 3 | 155 | 287 | 131 | 253 | 5.61e-13 | 71.2 |
| Msa0173730 | AT4G24630.1 | 30.075 | 133 | 83 | 3 | 155 | 287 | 135 | 257 | 5.68e-13 | 71.2 |
| Msa0173730 | AT3G04970.2 | 43.836 | 73 | 36 | 2 | 153 | 221 | 153 | 224 | 6.18e-13 | 70.1 |
| Msa0173730 | AT3G04970.1 | 42.105 | 76 | 39 | 2 | 153 | 224 | 153 | 227 | 7.96e-13 | 70.5 |
| Msa0173730 | AT5G50020.3 | 30.075 | 133 | 83 | 4 | 155 | 287 | 135 | 257 | 1.87e-12 | 69.7 |
| Msa0173730 | AT5G50020.2 | 30.075 | 133 | 83 | 4 | 155 | 287 | 165 | 287 | 2.36e-12 | 69.3 |
| Msa0173730 | AT5G04270.1 | 29.921 | 127 | 75 | 3 | 169 | 295 | 105 | 217 | 2.81e-12 | 67.8 |
| Msa0173730 | AT3G09320.1 | 29.677 | 155 | 95 | 4 | 141 | 293 | 80 | 222 | 7.76e-12 | 66.6 |
| Msa0173730 | AT4G22750.1 | 26.291 | 213 | 135 | 5 | 85 | 285 | 33 | 235 | 1.66e-11 | 65.9 |
| Msa0173730 | AT5G05070.1 | 27.820 | 133 | 82 | 3 | 155 | 287 | 170 | 288 | 6.78e-11 | 64.7 |
Find 117 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGACTTGAAAGCCTTAA+TGG | 0.179701 | 1_4:-59101893 | None:intergenic |
| CCCCTTTGATCAACACAAAA+AGG | 0.201505 | 1_4:+59101633 | Msa0173730:CDS |
| ATGTATAAATTTGATTTATA+AGG | 0.203769 | 1_4:-59102185 | None:intergenic |
| CTTAACTATGGATTCATTAT+TGG | 0.227661 | 1_4:+59100144 | Msa0173730:CDS |
| AGAGAACTACCTTTCGTATT+AGG | 0.235966 | 1_4:-59101138 | None:intergenic |
| CCTGCAGAAAATCTTCTTCT+TGG | 0.247950 | 1_4:-59101911 | None:intergenic |
| GCAATTCCTAAGCTTAACTA+TGG | 0.264138 | 1_4:+59100132 | Msa0173730:CDS |
| TTTCTTCTTCTTCTTGAAAC+TGG | 0.265760 | 1_4:-59100094 | None:intergenic |
| AATATTGGCAATGAGGGATT+TGG | 0.269143 | 1_4:+59101830 | Msa0173730:CDS |
| CATGGGGATTTATAGTTTCC+TGG | 0.270284 | 1_4:+59098893 | Msa0173730:CDS |
| ACGTCCTCTTCATCCTTTAC+AGG | 0.290395 | 1_4:+59098772 | Msa0173730:CDS |
| AACTTCATGTATCACCATTA+AGG | 0.298327 | 1_4:+59101879 | Msa0173730:CDS |
| CTTAGGAATTGCATTCCTTT+TGG | 0.301238 | 1_4:-59100121 | None:intergenic |
| AGTGGTTGAATAACTGTATT+GGG | 0.305251 | 1_4:+59100643 | Msa0173730:intron |
| GCATTGCCTCTGAAAATTAC+AGG | 0.312239 | 1_4:-59102278 | None:intergenic |
| AAATACAATGCCTACAATCT+TGG | 0.312560 | 1_4:-59102094 | None:intergenic |
| AATTACCATGAAGGAAAATA+TGG | 0.329971 | 1_4:-59098982 | None:intergenic |
| AATACAATGCCTACAATCTT+GGG | 0.335957 | 1_4:-59102093 | None:intergenic |
| TTCATAATAGTAACAGCGTT+TGG | 0.336439 | 1_4:-59102335 | None:intergenic |
| CAGTGGTTGAATAACTGTAT+TGG | 0.338312 | 1_4:+59100642 | Msa0173730:intron |
| AATGAGAACTAACCATTAAC+AGG | 0.349646 | 1_4:-59100707 | None:intergenic |
| AGAGAATGAAGCCATGGAAT+TGG | 0.360067 | 1_4:+59101386 | Msa0173730:CDS |
| GCTTATAGTTCAGCTGCATT+GGG | 0.362020 | 1_4:+59101091 | Msa0173730:CDS |
| AGCTTATAGTTCAGCTGCAT+TGG | 0.379994 | 1_4:+59101090 | Msa0173730:CDS |
| AAGGGTTTGATCACCATTGC+AGG | 0.380383 | 1_4:+59100529 | Msa0173730:CDS |
| CTGAAAATTACAGGTCCATT+TGG | 0.392432 | 1_4:-59102269 | None:intergenic |
| TTGAAAATGTGACAGTTTGT+AGG | 0.405221 | 1_4:+59098870 | Msa0173730:intron |
| TCAGATGCTTTGTGGATAAG+AGG | 0.407268 | 1_4:+59100869 | Msa0173730:CDS |
| GAATAGAAAAGGAGCTTCAT+AGG | 0.409924 | 1_4:+59100893 | Msa0173730:CDS |
| TCTTTCATAACAAATGGAAA+TGG | 0.412686 | 1_4:-59100279 | None:intergenic |
| ATATTGGCAATGAGGGATTT+GGG | 0.413742 | 1_4:+59101831 | Msa0173730:CDS |
| AGCTTGAAACACATATTTCC+AGG | 0.415244 | 1_4:+59102026 | Msa0173730:CDS |
| TCATCATCTTTCATAACAAA+TGG | 0.417582 | 1_4:-59100285 | None:intergenic |
| TCGGACTCTTCCTCGGAAAC+CGG | 0.431784 | 1_4:+59098937 | Msa0173730:CDS |
| AATGAACTGTGCTCCCTCAT+TGG | 0.434720 | 1_4:-59101755 | None:intergenic |
| TGAACCATCCCCAAGATTGT+AGG | 0.438601 | 1_4:+59102084 | Msa0173730:CDS |
| GATATTTATCAGATGCTTTG+TGG | 0.442584 | 1_4:+59100861 | Msa0173730:CDS |
| ATGTCGTCCTCTTTAAGATC+AGG | 0.449853 | 1_4:-59100321 | None:intergenic |
| GTGTGTTTCTATACTTTCCT+CGG | 0.453785 | 1_4:+59098918 | Msa0173730:CDS |
| GAGGACCTATGACTATATTC+TGG | 0.454122 | 1_4:+59101353 | Msa0173730:CDS |
| CTTTCATAACAAATGGAAAT+GGG | 0.456489 | 1_4:-59100278 | None:intergenic |
| TCAGATGACTATTACACATA+TGG | 0.457257 | 1_4:-59100953 | None:intergenic |
| ATGAATCCATAGTTAAGCTT+AGG | 0.465933 | 1_4:-59100138 | None:intergenic |
| TTGAAACTGGTTCTGTCTGT+AGG | 0.467295 | 1_4:-59100081 | None:intergenic |
| TGTTCAGTTATCAGCAAAGA+TGG | 0.472599 | 1_4:+59102058 | Msa0173730:CDS |
| TTTCTGTTTACTTTAAACAT+AGG | 0.477009 | 1_4:+59102236 | Msa0173730:three_prime_UTR |
| TTATAAATCAAATTTATACA+TGG | 0.477535 | 1_4:+59102187 | Msa0173730:three_prime_UTR |
| TTCATTAAGACCTCTTCCAT+TGG | 0.478810 | 1_4:+59101772 | Msa0173730:CDS |
| AAATTACAGGTCCATTTGGC+TGG | 0.479592 | 1_4:-59102265 | None:intergenic |
| TGAAGTTAGCAGGTGTGTCT+AGG | 0.480378 | 1_4:+59102002 | Msa0173730:CDS |
| ATAGGATAATTCCAGCCAAA+TGG | 0.480414 | 1_4:+59102254 | Msa0173730:three_prime_UTR |
| AAAATCCTTGACATTAGTGT+TGG | 0.485995 | 1_4:-59101471 | None:intergenic |
| AACTGAACATAGAACCTGCC+TGG | 0.487655 | 1_4:-59102044 | None:intergenic |
| CACTCGTCTTCAACGGATCA+AGG | 0.488073 | 1_4:-59100236 | None:intergenic |
| TTCACGTAAGCATTAACCCT+TGG | 0.489341 | 1_4:+59101657 | Msa0173730:CDS |
| ACTTGTAATCGTTGCGTTGA+AGG | 0.491089 | 1_4:+59100510 | Msa0173730:CDS |
| ATGTGACAGTTTGTAGGCAT+GGG | 0.494330 | 1_4:+59098876 | Msa0173730:intron |
| TGTGAACAGCTCATCATTGA+AGG | 0.494729 | 1_4:+59100823 | Msa0173730:intron |
| GGGTGGAAAAGAAGTTGCTT+AGG | 0.494730 | 1_4:+59100193 | Msa0173730:CDS |
| CATTGCCAGAATATAGTCAT+AGG | 0.496409 | 1_4:-59101358 | None:intergenic |
| GGATAAGAGGGGAATAGAAA+AGG | 0.502714 | 1_4:+59100882 | Msa0173730:CDS |
| CAGATGCTTTGTGGATAAGA+GGG | 0.503857 | 1_4:+59100870 | Msa0173730:CDS |
| GTCAACTTTACGAGTTTCCA+AGG | 0.513589 | 1_4:-59101674 | None:intergenic |
| GCTCTTTCTCGTCAACTCAA+CGG | 0.513844 | 1_4:-59098677 | None:intergenic |
| TTTGTTTCATAAAGGGGATG+AGG | 0.518890 | 1_4:+59101334 | Msa0173730:intron |
| CTTGTAATCGTTGCGTTGAA+GGG | 0.519111 | 1_4:+59100511 | Msa0173730:CDS |
| ATGGTGGCAAGAAGTCCTCT+TGG | 0.521474 | 1_4:-59100934 | None:intergenic |
| ACTTTCCTCGGACTCTTCCT+CGG | 0.525401 | 1_4:+59098930 | Msa0173730:CDS |
| TGAAACACATATTTCCAGGC+AGG | 0.526662 | 1_4:+59102030 | Msa0173730:CDS |
| ACGCGGACCATTGACGAATG+TGG | 0.527722 | 1_4:+59101802 | Msa0173730:CDS |
| TACTTGCAGCTGAGAAAGCA+AGG | 0.530537 | 1_4:+59101711 | Msa0173730:CDS |
| GAAGTTAGCAGGTGTGTCTA+GGG | 0.530558 | 1_4:+59102003 | Msa0173730:CDS |
| TATAAATCAAATTTATACAT+GGG | 0.533955 | 1_4:+59102188 | Msa0173730:three_prime_UTR |
| ACTTGTGCACTCGTCTTCAA+CGG | 0.546561 | 1_4:-59100243 | None:intergenic |
| ACAAATGGAAATGGGAGAAG+AGG | 0.548200 | 1_4:-59100270 | None:intergenic |
| ACACTATGAGACGCCATGGT+TGG | 0.551650 | 1_4:+59098747 | Msa0173730:exon |
| CAATGCTGTCATCTGATGAA+AGG | 0.552272 | 1_4:-59101428 | None:intergenic |
| GTTGAAGACGAGTGCACAAG+TGG | 0.554243 | 1_4:+59100245 | Msa0173730:CDS |
| AATGTGACAGTTTGTAGGCA+TGG | 0.560320 | 1_4:+59098875 | Msa0173730:intron |
| ATCAAATGACTCCAATTCCA+TGG | 0.560589 | 1_4:-59101397 | None:intergenic |
| CAGCTGAGAAAGCAAGGGAA+AGG | 0.566987 | 1_4:+59101717 | Msa0173730:CDS |
| GAATAGATAAATTACCATGA+AGG | 0.567650 | 1_4:-59098991 | None:intergenic |
| TTTACCTGTAAAGGATGAAG+AGG | 0.576281 | 1_4:-59098776 | None:intergenic |
| GAGAGAAGAGAATGAAGCCA+TGG | 0.580808 | 1_4:+59101380 | Msa0173730:CDS |
| TGTCGTCCCTGATCTTAAAG+AGG | 0.582192 | 1_4:+59100314 | Msa0173730:CDS |
| TTTGTGTTGATCAAAGGGGA+AGG | 0.592051 | 1_4:-59101629 | None:intergenic |
| CGTGCGAGAAAGACCAATGA+GGG | 0.592418 | 1_4:+59101742 | Msa0173730:CDS |
| AAAAGCCAACACTAATGTCA+AGG | 0.594065 | 1_4:+59101466 | Msa0173730:CDS |
| TCACGTTCTCCTAATACGAA+AGG | 0.596273 | 1_4:+59101129 | Msa0173730:CDS |
| AAGTATAGAAACACACCACC+AGG | 0.598487 | 1_4:-59098911 | None:intergenic |
| AACAGATACTGACCCTGCAA+TGG | 0.599614 | 1_4:-59100542 | None:intergenic |
| AGGGTTTGATCACCATTGCA+GGG | 0.600426 | 1_4:+59100530 | Msa0173730:CDS |
| TTAGTGTTATCTCAGCAGTC+CGG | 0.604693 | 1_4:-59098956 | None:intergenic |
| TGTCGTCCTCTTTAAGATCA+GGG | 0.605943 | 1_4:-59100320 | None:intergenic |
| ATTCATTATTGGTCAGATTG+TGG | 0.609221 | 1_4:+59100155 | Msa0173730:CDS |
| TCTCAGCAGTCCGGTTTCCG+AGG | 0.611882 | 1_4:-59098947 | None:intergenic |
| AATGCCTACAATCTTGGGGA+TGG | 0.620549 | 1_4:-59102088 | None:intergenic |
| ATACAATGCCTACAATCTTG+GGG | 0.620828 | 1_4:-59102092 | None:intergenic |
| TTATTGGTCAGATTGTGGTG+AGG | 0.621959 | 1_4:+59100160 | Msa0173730:CDS |
| GAACAGCTCATCATTGAAGG+AGG | 0.626679 | 1_4:+59100826 | Msa0173730:intron |
| AACAGCTCATCATTGAAGGA+GGG | 0.627474 | 1_4:+59100827 | Msa0173730:intron |
| GAAGAGGACGTTGCCAACCA+TGG | 0.631280 | 1_4:-59098760 | None:intergenic |
| GATGACTATTACACATATGG+TGG | 0.631412 | 1_4:-59100950 | None:intergenic |
| TGTGACAGTTTGTAGGCATG+GGG | 0.633700 | 1_4:+59098877 | Msa0173730:intron |
| CTTATAGTTCAGCTGCATTG+GGG | 0.635397 | 1_4:+59101092 | Msa0173730:CDS |
| ACTTGCAGCTGAGAAAGCAA+GGG | 0.638549 | 1_4:+59101712 | Msa0173730:CDS |
| ATACACACTATGAGACGCCA+TGG | 0.640263 | 1_4:+59098743 | Msa0173730:exon |
| ATAAGGAAACTATGATACAA+TGG | 0.642983 | 1_4:-59102168 | None:intergenic |
| TCAACTTTACGAGTTTCCAA+GGG | 0.643170 | 1_4:-59101673 | None:intergenic |
| GGGGATTTATAGTTTCCTGG+TGG | 0.645721 | 1_4:+59098896 | Msa0173730:CDS |
| TACCATGAAGGAAAATATGG+AGG | 0.650461 | 1_4:-59098979 | None:intergenic |
| AGATGCTTTGTGGATAAGAG+GGG | 0.666780 | 1_4:+59100871 | Msa0173730:CDS |
| TCGTGCGAGAAAGACCAATG+AGG | 0.674025 | 1_4:+59101741 | Msa0173730:CDS |
| GGTTTCCGAGGAAGAGTCCG+AGG | 0.676986 | 1_4:-59098935 | None:intergenic |
| TCAATCTTGATAGACAACCT+AGG | 0.679060 | 1_4:-59101593 | None:intergenic |
| CTTCCATTGGAGACAAAACG+CGG | 0.706884 | 1_4:+59101785 | Msa0173730:CDS |
| ATGCTGCTAGAGAATACCGA+TGG | 0.739752 | 1_4:-59101938 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTGATATTTTTTAATTTA+AGG | + | chr1_4:59099860-59099879 | Msa0173730:intron | 10.0% |
| !!! | ATGTATAAATTTGATTTATA+AGG | - | chr1_4:59102188-59102207 | None:intergenic | 10.0% |
| !! | TTATAAATCAAATTTATACA+TGG | + | chr1_4:59102187-59102206 | Msa0173730:three_prime_UTR | 10.0% |
| !! | TATAAATCAAATTTATACAT+GGG | + | chr1_4:59102188-59102207 | Msa0173730:three_prime_UTR | 10.0% |
| !! | AACTAAAATGAAAAATAGAA+AGG | - | chr1_4:59098810-59098829 | None:intergenic | 15.0% |
| !!! | ACCATATTTTTTTTCAAAAA+TGG | + | chr1_4:59099055-59099074 | Msa0173730:intron | 15.0% |
| !!! | GGAATTATTTATTTTTGAAT+TGG | + | chr1_4:59099111-59099130 | Msa0173730:intron | 15.0% |
| !! | AAGATAATTTAAGCAAAAAA+GGG | - | chr1_4:59099626-59099645 | None:intergenic | 15.0% |
| !!! | TTTTTTGCTTAAATTATCTT+CGG | + | chr1_4:59099626-59099645 | Msa0173730:intron | 15.0% |
| !!! | TTACTAAAGAAATATTTTGA+TGG | - | chr1_4:59099739-59099758 | None:intergenic | 15.0% |
| !!! | CCATTTTTTAAACTTTATAA+AGG | - | chr1_4:59099833-59099852 | None:intergenic | 15.0% |
| !! | CCTTTATAAAGTTTAAAAAA+TGG | + | chr1_4:59099830-59099849 | Msa0173730:intron | 15.0% |
| !!! | TCGTTTTTTGTTTTTGTTTT+TGG | - | chr1_4:59098706-59098725 | None:intergenic | 20.0% |
| !!! | GCCATTTTTGAAAAAAAATA+TGG | - | chr1_4:59099059-59099078 | None:intergenic | 20.0% |
| !! | AATGAATTCAATTTAGGTAA+CGG | + | chr1_4:59099256-59099275 | Msa0173730:intron | 20.0% |
| !! | AGATAATTTAAGCAAAAAAG+GGG | - | chr1_4:59099625-59099644 | None:intergenic | 20.0% |
| !! | GAAGATAATTTAAGCAAAAA+AGG | - | chr1_4:59099627-59099646 | None:intergenic | 20.0% |
| !! | AAAATGCTTATTTACTAGTT+TGG | - | chr1_4:59099677-59099696 | None:intergenic | 20.0% |
| !! | ATTGATATTCTTACAATTAC+AGG | - | chr1_4:59099703-59099722 | None:intergenic | 20.0% |
| !! | GTCAATATTATATCGTTTAT+CGG | - | chr1_4:59099773-59099792 | None:intergenic | 20.0% |
| !!! | TATTGACTTAAATAGTCTTT+CGG | + | chr1_4:59099786-59099805 | Msa0173730:intron | 20.0% |
| !!! | TTTTTTTTTAATCTTAAGCG+TGG | + | chr1_4:59100413-59100432 | Msa0173730:intron | 20.0% |
| !! | CAGAATTAATGTTAAATAGA+AGG | - | chr1_4:59101020-59101039 | None:intergenic | 20.0% |
| !!! | TTGTTTGATTTGTTTCATAA+AGG | + | chr1_4:59101326-59101345 | Msa0173730:intron | 20.0% |
| !!! | TGTTTGATTTGTTTCATAAA+GGG | + | chr1_4:59101327-59101346 | Msa0173730:intron | 20.0% |
| !! | TTTCTGTTTACTTTAAACAT+AGG | + | chr1_4:59102236-59102255 | Msa0173730:three_prime_UTR | 20.0% |
| ! | AATTACCATGAAGGAAAATA+TGG | - | chr1_4:59098985-59099004 | None:intergenic | 25.0% |
| ! | GAATAGATAAATTACCATGA+AGG | - | chr1_4:59098994-59099013 | None:intergenic | 25.0% |
| ! | GCAATGAATGAATTCAATTT+AGG | + | chr1_4:59099250-59099269 | Msa0173730:intron | 25.0% |
| ! | AAGTAACATTAATGCTTCAT+TGG | + | chr1_4:59099394-59099413 | Msa0173730:intron | 25.0% |
| ! | TTGAAATGCGACATATAATT+TGG | + | chr1_4:59099419-59099438 | Msa0173730:intron | 25.0% |
| ! | TGAAATGCGACATATAATTT+GGG | + | chr1_4:59099420-59099439 | Msa0173730:intron | 25.0% |
| !!! | CTAAAGAAATATTTTGATGG+AGG | - | chr1_4:59099736-59099755 | None:intergenic | 25.0% |
| ! | CTTAACTATGGATTCATTAT+TGG | + | chr1_4:59100144-59100163 | Msa0173730:CDS | 25.0% |
| ! | CTTTCATAACAAATGGAAAT+GGG | - | chr1_4:59100281-59100300 | None:intergenic | 25.0% |
| ! | TCTTTCATAACAAATGGAAA+TGG | - | chr1_4:59100282-59100301 | None:intergenic | 25.0% |
| ! | TCATCATCTTTCATAACAAA+TGG | - | chr1_4:59100288-59100307 | None:intergenic | 25.0% |
| !!! | GTTTGATTTGTTTCATAAAG+GGG | + | chr1_4:59101328-59101347 | Msa0173730:intron | 25.0% |
| ! | ACGAATGTGGAAAAAAATAT+TGG | + | chr1_4:59101815-59101834 | Msa0173730:CDS | 25.0% |
| ! | GAAAAAAATATTGGCAATGA+GGG | + | chr1_4:59101824-59101843 | Msa0173730:CDS | 25.0% |
| ! | ATAAGGAAACTATGATACAA+TGG | - | chr1_4:59102171-59102190 | None:intergenic | 25.0% |
| !! | GATGATGTTTTTACCTGTAA+AGG | - | chr1_4:59098788-59098807 | None:intergenic | 30.0% |
| TTGAAAATGTGACAGTTTGT+AGG | + | chr1_4:59098870-59098889 | Msa0173730:intron | 30.0% | |
| TAAACATGAGATTAAGCACA+AGG | + | chr1_4:59099090-59099109 | Msa0173730:intron | 30.0% | |
| ! | TGGTTTGAGTCAATTTTCAT+AGG | - | chr1_4:59099211-59099230 | None:intergenic | 30.0% |
| ATTGAATTCATTCATTGCAC+TGG | - | chr1_4:59099248-59099267 | None:intergenic | 30.0% | |
| !! | AATTTAGGTAACGGAAATGA+GGG | + | chr1_4:59099265-59099284 | Msa0173730:intron | 30.0% |
| ! | TTCCAAAGCGACATATATTT+TGG | + | chr1_4:59099455-59099474 | Msa0173730:intron | 30.0% |
| ! | TCCAAAGCGACATATATTTT+GGG | + | chr1_4:59099456-59099475 | Msa0173730:intron | 30.0% |
| ! | ATCAACTGTTTTCAGTTTCA+AGG | + | chr1_4:59099575-59099594 | Msa0173730:intron | 30.0% |
| TTGCTTAAATTATCTTCGGT+CGG | + | chr1_4:59099630-59099649 | Msa0173730:intron | 30.0% | |
| !!! | TTTGGAGGCTTTTTCAAAAT+AGG | - | chr1_4:59099659-59099678 | None:intergenic | 30.0% |
| ! | ATGCTTATTTACTAGTTTGG+AGG | - | chr1_4:59099674-59099693 | None:intergenic | 30.0% |
| GACTGAATTGATATTTCTCA+AGG | + | chr1_4:59099883-59099902 | Msa0173730:intron | 30.0% | |
| AATTGTTATCAATGTGTGTC+TGG | + | chr1_4:59099956-59099975 | Msa0173730:intron | 30.0% | |
| !!! | ATAATTTTGTTGCTTTGCAC+AGG | + | chr1_4:59100014-59100033 | Msa0173730:intron | 30.0% |
| !! | CAGTTATGTTTTTGTTTGTG+AGG | + | chr1_4:59100043-59100062 | Msa0173730:CDS | 30.0% |
| TTTCTTCTTCTTCTTGAAAC+TGG | - | chr1_4:59100097-59100116 | None:intergenic | 30.0% | |
| AGAAGAAGAAAAAAGCCAAA+AGG | + | chr1_4:59100106-59100125 | Msa0173730:CDS | 30.0% | |
| ATGAATCCATAGTTAAGCTT+AGG | - | chr1_4:59100141-59100160 | None:intergenic | 30.0% | |
| ATTCATTATTGGTCAGATTG+TGG | + | chr1_4:59100155-59100174 | Msa0173730:CDS | 30.0% | |
| ACTCTGTTTATATGTGAATC+AGG | + | chr1_4:59100461-59100480 | Msa0173730:intron | 30.0% | |
| !!! | TTTTCTTCTCTTGTTTTCAG+TGG | + | chr1_4:59100625-59100644 | Msa0173730:intron | 30.0% |
| AGTGGTTGAATAACTGTATT+GGG | + | chr1_4:59100643-59100662 | Msa0173730:intron | 30.0% | |
| ! | GATGATTTTTGTCCTGTTAA+TGG | + | chr1_4:59100695-59100714 | Msa0173730:CDS | 30.0% |
| AATGAGAACTAACCATTAAC+AGG | - | chr1_4:59100710-59100729 | None:intergenic | 30.0% | |
| GATATTTATCAGATGCTTTG+TGG | + | chr1_4:59100861-59100880 | Msa0173730:CDS | 30.0% | |
| TCAGATGACTATTACACATA+TGG | - | chr1_4:59100956-59100975 | None:intergenic | 30.0% | |
| ATAGTCATCTGAATTGTTTC+TGG | + | chr1_4:59100964-59100983 | Msa0173730:intron | 30.0% | |
| ! | TAGTCATCTGAATTGTTTCT+GGG | + | chr1_4:59100965-59100984 | Msa0173730:intron | 30.0% |
| ATAGAAGGTTCAAAAGTCAA+GGG | - | chr1_4:59101005-59101024 | None:intergenic | 30.0% | |
| AATAGAAGGTTCAAAAGTCA+AGG | - | chr1_4:59101006-59101025 | None:intergenic | 30.0% | |
| AAAATCCTTGACATTAGTGT+TGG | - | chr1_4:59101474-59101493 | None:intergenic | 30.0% | |
| ! | ATGTCAAGGATTTTATGCAA+AGG | + | chr1_4:59101480-59101499 | Msa0173730:CDS | 30.0% |
| !! | ACCTTTTTGTGTTGATCAAA+GGG | - | chr1_4:59101637-59101656 | None:intergenic | 30.0% |
| !! | AACCTTTTTGTGTTGATCAA+AGG | - | chr1_4:59101638-59101657 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCACATTCGTCAA+TGG | - | chr1_4:59101812-59101831 | None:intergenic | 30.0% |
| GGAAAAAAATATTGGCAATG+AGG | + | chr1_4:59101823-59101842 | Msa0173730:CDS | 30.0% | |
| ! | TCAACACCTTTTATAGCAAA+AGG | + | chr1_4:59101854-59101873 | Msa0173730:CDS | 30.0% |
| ! | CAACACCTTTTATAGCAAAA+GGG | + | chr1_4:59101855-59101874 | Msa0173730:CDS | 30.0% |
| ! | AACACCTTTTATAGCAAAAG+GGG | + | chr1_4:59101856-59101875 | Msa0173730:CDS | 30.0% |
| AACTTCATGTATCACCATTA+AGG | + | chr1_4:59101879-59101898 | Msa0173730:CDS | 30.0% | |
| !!! | CTGCTTCTATATTTGTTTTG+TGG | - | chr1_4:59101974-59101993 | None:intergenic | 30.0% |
| AATACAATGCCTACAATCTT+GGG | - | chr1_4:59102096-59102115 | None:intergenic | 30.0% | |
| AAATACAATGCCTACAATCT+TGG | - | chr1_4:59102097-59102116 | None:intergenic | 30.0% | |
| TTTACCTGTAAAGGATGAAG+AGG | - | chr1_4:59098779-59098798 | None:intergenic | 35.0% | |
| ! | GTGTGTTTCTATACTTTCCT+CGG | + | chr1_4:59098918-59098937 | Msa0173730:CDS | 35.0% |
| ! | AACCTCCATATTTTCCTTCA+TGG | + | chr1_4:59098977-59098996 | Msa0173730:CDS | 35.0% |
| TACCATGAAGGAAAATATGG+AGG | - | chr1_4:59098982-59099001 | None:intergenic | 35.0% | |
| CACTGGATTGTACTTTGAAT+TGG | - | chr1_4:59099231-59099250 | None:intergenic | 35.0% | |
| !! | CAATTTAGGTAACGGAAATG+AGG | + | chr1_4:59099264-59099283 | Msa0173730:intron | 35.0% |
| !! | ATTTAGGTAACGGAAATGAG+GGG | + | chr1_4:59099266-59099285 | Msa0173730:intron | 35.0% |
| ! | TCCCAAAATATATGTCGCTT+TGG | - | chr1_4:59099460-59099479 | None:intergenic | 35.0% |
| !! | AAGCGACATATATTTTGGGA+CGG | + | chr1_4:59099460-59099479 | Msa0173730:intron | 35.0% |
| !! | AGTTGTTATGCTGGTTTAGA+GGG | - | chr1_4:59099529-59099548 | None:intergenic | 35.0% |
| !! | AAGTTGTTATGCTGGTTTAG+AGG | - | chr1_4:59099530-59099549 | None:intergenic | 35.0% |
| ! | AGCATCTTAAGTTGTTATGC+TGG | - | chr1_4:59099538-59099557 | None:intergenic | 35.0% |
| ! | GAAACTGAAAACAGTTGATG+CGG | - | chr1_4:59099574-59099593 | None:intergenic | 35.0% |
| TATACTATCAAGCACACACT+CGG | - | chr1_4:59099985-59100004 | None:intergenic | 35.0% | |
| !! | GTTTTTGTTTGTGAGGTGTA+CGG | + | chr1_4:59100050-59100069 | Msa0173730:CDS | 35.0% |
| ! | CTTAGGAATTGCATTCCTTT+TGG | - | chr1_4:59100124-59100143 | None:intergenic | 35.0% |
| GCAATTCCTAAGCTTAACTA+TGG | + | chr1_4:59100132-59100151 | Msa0173730:CDS | 35.0% | |
| ! | TTGCACACTTTGTGATTTTG+AGG | + | chr1_4:59100350-59100369 | Msa0173730:CDS | 35.0% |
| ! | ATCTGTTACTGTTAGGCTTT+TGG | + | chr1_4:59100558-59100577 | Msa0173730:intron | 35.0% |
| CAGTGGTTGAATAACTGTAT+TGG | + | chr1_4:59100642-59100661 | Msa0173730:intron | 35.0% | |
| GAATAGAAAAGGAGCTTCAT+AGG | + | chr1_4:59100893-59100912 | Msa0173730:CDS | 35.0% | |
| ! | CTTTTTGTAGAGTTTCCAAG+AGG | + | chr1_4:59100919-59100938 | Msa0173730:CDS | 35.0% |
| GATGACTATTACACATATGG+TGG | - | chr1_4:59100953-59100972 | None:intergenic | 35.0% | |
| AGAGAACTACCTTTCGTATT+AGG | - | chr1_4:59101141-59101160 | None:intergenic | 35.0% | |
| AGAACTGCACAGAAAATCAA+AGG | - | chr1_4:59101289-59101308 | None:intergenic | 35.0% | |
| TTTGTTTCATAAAGGGGATG+AGG | + | chr1_4:59101334-59101353 | Msa0173730:intron | 35.0% | |
| CATTGCCAGAATATAGTCAT+AGG | - | chr1_4:59101361-59101380 | None:intergenic | 35.0% | |
| ATCAAATGACTCCAATTCCA+TGG | - | chr1_4:59101400-59101419 | None:intergenic | 35.0% | |
| AAAAGCCAACACTAATGTCA+AGG | + | chr1_4:59101466-59101485 | Msa0173730:CDS | 35.0% | |
| ! | AAGGATTTTATGCAAAGGAC+AGG | + | chr1_4:59101485-59101504 | Msa0173730:CDS | 35.0% |
| ! | TAAGGTTTGAGACAGAATGA+AGG | - | chr1_4:59101541-59101560 | None:intergenic | 35.0% |
| TCAAAACAAGCTTCTCTGTA+AGG | - | chr1_4:59101559-59101578 | None:intergenic | 35.0% | |
| TCAATCTTGATAGACAACCT+AGG | - | chr1_4:59101596-59101615 | None:intergenic | 35.0% | |
| !! | CCTTTTTGTGTTGATCAAAG+GGG | - | chr1_4:59101636-59101655 | None:intergenic | 35.0% |
| TCAACTTTACGAGTTTCCAA+GGG | - | chr1_4:59101676-59101695 | None:intergenic | 35.0% | |
| TTCATTAAGACCTCTTCCAT+TGG | + | chr1_4:59101772-59101791 | Msa0173730:CDS | 35.0% | |
| AATATTGGCAATGAGGGATT+TGG | + | chr1_4:59101830-59101849 | Msa0173730:CDS | 35.0% | |
| ATATTGGCAATGAGGGATTT+GGG | + | chr1_4:59101831-59101850 | Msa0173730:CDS | 35.0% | |
| !! | AGTTCCCCTTTTGCTATAAA+AGG | - | chr1_4:59101863-59101882 | None:intergenic | 35.0% |
| !!! | AGTTTTGACTTGAAGTTAGC+AGG | + | chr1_4:59101992-59102011 | Msa0173730:CDS | 35.0% |
| AGCTTGAAACACATATTTCC+AGG | + | chr1_4:59102026-59102045 | Msa0173730:CDS | 35.0% | |
| TGTTCAGTTATCAGCAAAGA+TGG | + | chr1_4:59102058-59102077 | Msa0173730:CDS | 35.0% | |
| ATACAATGCCTACAATCTTG+GGG | - | chr1_4:59102095-59102114 | None:intergenic | 35.0% | |
| ATAGGATAATTCCAGCCAAA+TGG | + | chr1_4:59102254-59102273 | Msa0173730:three_prime_UTR | 35.0% | |
| CTGAAAATTACAGGTCCATT+TGG | - | chr1_4:59102272-59102291 | None:intergenic | 35.0% | |
| ! | AATGGACCTGTAATTTTCAG+AGG | + | chr1_4:59102272-59102291 | Msa0173730:three_prime_UTR | 35.0% |
| AATGTGACAGTTTGTAGGCA+TGG | + | chr1_4:59098875-59098894 | Msa0173730:intron | 40.0% | |
| ATGTGACAGTTTGTAGGCAT+GGG | + | chr1_4:59098876-59098895 | Msa0173730:intron | 40.0% | |
| CATGGGGATTTATAGTTTCC+TGG | + | chr1_4:59098893-59098912 | Msa0173730:CDS | 40.0% | |
| AAGTATAGAAACACACCACC+AGG | - | chr1_4:59098914-59098933 | None:intergenic | 40.0% | |
| TTAGTGTTATCTCAGCAGTC+CGG | - | chr1_4:59098959-59098978 | None:intergenic | 40.0% | |
| ATCTGTGCTAAACCGATCAA+AGG | + | chr1_4:59099162-59099181 | Msa0173730:intron | 40.0% | |
| CCAAACAGTGTACCTTTGAT+CGG | - | chr1_4:59099177-59099196 | None:intergenic | 40.0% | |
| !! | TTTAGGTAACGGAAATGAGG+GGG | + | chr1_4:59099267-59099286 | Msa0173730:intron | 40.0% |
| !! | AAAGGAGCATTTCTGAGATG+GGG | - | chr1_4:59099334-59099353 | None:intergenic | 40.0% |
| !! | GAAAGGAGCATTTCTGAGAT+GGG | - | chr1_4:59099335-59099354 | None:intergenic | 40.0% |
| ATGTTACAGCACCAATAGCA+GGG | - | chr1_4:59099357-59099376 | None:intergenic | 40.0% | |
| AATGTTACAGCACCAATAGC+AGG | - | chr1_4:59099358-59099377 | None:intergenic | 40.0% | |
| !!! | GACATATATTTTGGGACGGA+GGG | + | chr1_4:59099464-59099483 | Msa0173730:intron | 40.0% |
| !! | GTTGTTATGCTGGTTTAGAG+GGG | - | chr1_4:59099528-59099547 | None:intergenic | 40.0% |
| !! | TTGAAACTGGTTCTGTCTGT+AGG | - | chr1_4:59100084-59100103 | None:intergenic | 40.0% |
| TTATTGGTCAGATTGTGGTG+AGG | + | chr1_4:59100160-59100179 | Msa0173730:CDS | 40.0% | |
| ! | AGATTGTGGTGAGGTTTTTC+AGG | + | chr1_4:59100169-59100188 | Msa0173730:CDS | 40.0% |
| ACAAATGGAAATGGGAGAAG+AGG | - | chr1_4:59100273-59100292 | None:intergenic | 40.0% | |
| !! | TGTCGTCCTCTTTAAGATCA+GGG | - | chr1_4:59100323-59100342 | None:intergenic | 40.0% |
| !! | ATGTCGTCCTCTTTAAGATC+AGG | - | chr1_4:59100324-59100343 | None:intergenic | 40.0% |
| ACTTGTAATCGTTGCGTTGA+AGG | + | chr1_4:59100510-59100529 | Msa0173730:CDS | 40.0% | |
| CTTGTAATCGTTGCGTTGAA+GGG | + | chr1_4:59100511-59100530 | Msa0173730:CDS | 40.0% | |
| GGTCAGTATCTGTTACTGTT+AGG | + | chr1_4:59100551-59100570 | Msa0173730:intron | 40.0% | |
| !! | ACATGGTGTTGGAAACGTTT+TGG | - | chr1_4:59100799-59100818 | None:intergenic | 40.0% |
| GTTCACATAACACATGGTGT+TGG | - | chr1_4:59100810-59100829 | None:intergenic | 40.0% | |
| TGAGCTGTTCACATAACACA+TGG | - | chr1_4:59100816-59100835 | None:intergenic | 40.0% | |
| TGTGAACAGCTCATCATTGA+AGG | + | chr1_4:59100823-59100842 | Msa0173730:intron | 40.0% | |
| AACAGCTCATCATTGAAGGA+GGG | + | chr1_4:59100827-59100846 | Msa0173730:intron | 40.0% | |
| TCAGATGCTTTGTGGATAAG+AGG | + | chr1_4:59100869-59100888 | Msa0173730:CDS | 40.0% | |
| CAGATGCTTTGTGGATAAGA+GGG | + | chr1_4:59100870-59100889 | Msa0173730:CDS | 40.0% | |
| AGATGCTTTGTGGATAAGAG+GGG | + | chr1_4:59100871-59100890 | Msa0173730:CDS | 40.0% | |
| GGATAAGAGGGGAATAGAAA+AGG | + | chr1_4:59100882-59100901 | Msa0173730:CDS | 40.0% | |
| TGAACTTCATGAAATGCTGC+AGG | + | chr1_4:59101048-59101067 | Msa0173730:intron | 40.0% | |
| AGCTTATAGTTCAGCTGCAT+TGG | + | chr1_4:59101090-59101109 | Msa0173730:CDS | 40.0% | |
| GCTTATAGTTCAGCTGCATT+GGG | + | chr1_4:59101091-59101110 | Msa0173730:CDS | 40.0% | |
| CTTATAGTTCAGCTGCATTG+GGG | + | chr1_4:59101092-59101111 | Msa0173730:CDS | 40.0% | |
| TCACGTTCTCCTAATACGAA+AGG | + | chr1_4:59101129-59101148 | Msa0173730:CDS | 40.0% | |
| GGTAGTTCTCTTTCTTGCTT+TGG | + | chr1_4:59101150-59101169 | Msa0173730:intron | 40.0% | |
| GAGGACCTATGACTATATTC+TGG | + | chr1_4:59101353-59101372 | Msa0173730:CDS | 40.0% | |
| AGAGAATGAAGCCATGGAAT+TGG | + | chr1_4:59101386-59101405 | Msa0173730:CDS | 40.0% | |
| CAATGCTGTCATCTGATGAA+AGG | - | chr1_4:59101431-59101450 | None:intergenic | 40.0% | |
| !!! | GACATTAGTGTTGGCTTTTC+AGG | - | chr1_4:59101465-59101484 | None:intergenic | 40.0% |
| ! | GACAGAATGAAGGCATAAAG+CGG | - | chr1_4:59101531-59101550 | None:intergenic | 40.0% |
| ! | TTTGTGTTGATCAAAGGGGA+AGG | - | chr1_4:59101632-59101651 | None:intergenic | 40.0% |
| CCCCTTTGATCAACACAAAA+AGG | + | chr1_4:59101633-59101652 | Msa0173730:CDS | 40.0% | |
| TTCACGTAAGCATTAACCCT+TGG | + | chr1_4:59101657-59101676 | Msa0173730:CDS | 40.0% | |
| GTCAACTTTACGAGTTTCCA+AGG | - | chr1_4:59101677-59101696 | None:intergenic | 40.0% | |
| !! | TGCAAGTAGAGCTTTTTCTC+TGG | - | chr1_4:59101699-59101718 | None:intergenic | 40.0% |
| CTTGGACTTGAAAGCCTTAA+TGG | - | chr1_4:59101896-59101915 | None:intergenic | 40.0% | |
| CCTGCAGAAAATCTTCTTCT+TGG | - | chr1_4:59101914-59101933 | None:intergenic | 40.0% | |
| ! | CCAAGAAGAAGATTTTCTGC+AGG | + | chr1_4:59101911-59101930 | Msa0173730:CDS | 40.0% |
| TGAAACACATATTTCCAGGC+AGG | + | chr1_4:59102030-59102049 | Msa0173730:CDS | 40.0% | |
| AAATTACAGGTCCATTTGGC+TGG | - | chr1_4:59102268-59102287 | None:intergenic | 40.0% | |
| ! | GCATTGCCTCTGAAAATTAC+AGG | - | chr1_4:59102281-59102300 | None:intergenic | 40.0% |
| GCTCTTTCTCGTCAACTCAA+CGG | - | chr1_4:59098680-59098699 | None:intergenic | 45.0% | |
| ATACACACTATGAGACGCCA+TGG | + | chr1_4:59098743-59098762 | Msa0173730:exon | 45.0% | |
| ACGTCCTCTTCATCCTTTAC+AGG | + | chr1_4:59098772-59098791 | Msa0173730:CDS | 45.0% | |
| TGTGACAGTTTGTAGGCATG+GGG | + | chr1_4:59098877-59098896 | Msa0173730:intron | 45.0% | |
| GGGGATTTATAGTTTCCTGG+TGG | + | chr1_4:59098896-59098915 | Msa0173730:CDS | 45.0% | |
| ! | CCGATCAAAGGTACACTGTT+TGG | + | chr1_4:59099174-59099193 | Msa0173730:intron | 45.0% |
| !! | AAGGAGCATTTCTGAGATGG+GGG | - | chr1_4:59099333-59099352 | None:intergenic | 45.0% |
| !! | GGAAAGGAGCATTTCTGAGA+TGG | - | chr1_4:59099336-59099355 | None:intergenic | 45.0% |
| AATGCTCCTTTCCCTGCTAT+TGG | + | chr1_4:59099343-59099362 | Msa0173730:intron | 45.0% | |
| !!! | CGACATATATTTTGGGACGG+AGG | + | chr1_4:59099463-59099482 | Msa0173730:intron | 45.0% |
| ! | ACTGAAAACAGTTGATGCGG+TGG | - | chr1_4:59099571-59099590 | None:intergenic | 45.0% |
| !!! | TTGTGGTGAGGTTTTTCAGG+AGG | + | chr1_4:59100172-59100191 | Msa0173730:CDS | 45.0% |
| !!! | TGTGGTGAGGTTTTTCAGGA+GGG | + | chr1_4:59100173-59100192 | Msa0173730:CDS | 45.0% |
| GGGTGGAAAAGAAGTTGCTT+AGG | + | chr1_4:59100193-59100212 | Msa0173730:CDS | 45.0% | |
| ACTTGTGCACTCGTCTTCAA+CGG | - | chr1_4:59100246-59100265 | None:intergenic | 45.0% | |
| TGTCGTCCCTGATCTTAAAG+AGG | + | chr1_4:59100314-59100333 | Msa0173730:CDS | 45.0% | |
| AAGGGTTTGATCACCATTGC+AGG | + | chr1_4:59100529-59100548 | Msa0173730:CDS | 45.0% | |
| AGGGTTTGATCACCATTGCA+GGG | + | chr1_4:59100530-59100549 | Msa0173730:CDS | 45.0% | |
| AACAGATACTGACCCTGCAA+TGG | - | chr1_4:59100545-59100564 | None:intergenic | 45.0% | |
| GAACAGCTCATCATTGAAGG+AGG | + | chr1_4:59100826-59100845 | Msa0173730:intron | 45.0% | |
| ! | AATCAAAGGCTGGAGCACTT+TGG | - | chr1_4:59101275-59101294 | None:intergenic | 45.0% |
| CTGCACAGAAAATCAAAGGC+TGG | - | chr1_4:59101285-59101304 | None:intergenic | 45.0% | |
| GAGAGAAGAGAATGAAGCCA+TGG | + | chr1_4:59101380-59101399 | Msa0173730:CDS | 45.0% | |
| ! | TGAGTTTTCAGAGCTCACCT+AGG | + | chr1_4:59101576-59101595 | Msa0173730:intron | 45.0% |
| TACTTGCAGCTGAGAAAGCA+AGG | + | chr1_4:59101711-59101730 | Msa0173730:CDS | 45.0% | |
| ACTTGCAGCTGAGAAAGCAA+GGG | + | chr1_4:59101712-59101731 | Msa0173730:CDS | 45.0% | |
| AATGAACTGTGCTCCCTCAT+TGG | - | chr1_4:59101758-59101777 | None:intergenic | 45.0% | |
| ! | CGTTTTGTCTCCAATGGAAG+AGG | - | chr1_4:59101785-59101804 | None:intergenic | 45.0% |
| CTTCCATTGGAGACAAAACG+CGG | + | chr1_4:59101785-59101804 | Msa0173730:CDS | 45.0% | |
| ! | ATTTTCTGCAGGCACACCAT+CGG | + | chr1_4:59101922-59101941 | Msa0173730:CDS | 45.0% |
| ATGCTGCTAGAGAATACCGA+TGG | - | chr1_4:59101941-59101960 | None:intergenic | 45.0% | |
| TGAAGTTAGCAGGTGTGTCT+AGG | + | chr1_4:59102002-59102021 | Msa0173730:CDS | 45.0% | |
| GAAGTTAGCAGGTGTGTCTA+GGG | + | chr1_4:59102003-59102022 | Msa0173730:CDS | 45.0% | |
| AACTGAACATAGAACCTGCC+TGG | - | chr1_4:59102047-59102066 | None:intergenic | 45.0% | |
| TGAACCATCCCCAAGATTGT+AGG | + | chr1_4:59102084-59102103 | Msa0173730:CDS | 45.0% | |
| AATGCCTACAATCTTGGGGA+TGG | - | chr1_4:59102091-59102110 | None:intergenic | 45.0% | |
| !!! | ATTGATATTTTTTAATTTAA+GGG | + | chr1_4:59099861-59099880 | Msa0173730:intron | 5.0% |
| ACACTATGAGACGCCATGGT+TGG | + | chr1_4:59098747-59098766 | Msa0173730:exon | 50.0% | |
| ACTTTCCTCGGACTCTTCCT+CGG | + | chr1_4:59098930-59098949 | Msa0173730:CDS | 50.0% | |
| ACAGCACCAATAGCAGGGAA+AGG | - | chr1_4:59099352-59099371 | None:intergenic | 50.0% | |
| ! | GCTGGTTTAGAGGGGTTATC+TGG | - | chr1_4:59099520-59099539 | None:intergenic | 50.0% |
| ! | AACAGTTGATGCGGTGGCAT+TGG | - | chr1_4:59099565-59099584 | None:intergenic | 50.0% |
| CACTCGTCTTCAACGGATCA+AGG | - | chr1_4:59100239-59100258 | None:intergenic | 50.0% | |
| GTTGAAGACGAGTGCACAAG+TGG | + | chr1_4:59100245-59100264 | Msa0173730:CDS | 50.0% | |
| ATGGTGGCAAGAAGTCCTCT+TGG | - | chr1_4:59100937-59100956 | None:intergenic | 50.0% | |
| CAGCTGAGAAAGCAAGGGAA+AGG | + | chr1_4:59101717-59101736 | Msa0173730:CDS | 50.0% | |
| TCGTGCGAGAAAGACCAATG+AGG | + | chr1_4:59101741-59101760 | Msa0173730:CDS | 50.0% | |
| CGTGCGAGAAAGACCAATGA+GGG | + | chr1_4:59101742-59101761 | Msa0173730:CDS | 50.0% | |
| GAAGAGGACGTTGCCAACCA+TGG | - | chr1_4:59098763-59098782 | None:intergenic | 55.0% | |
| TCGGACTCTTCCTCGGAAAC+CGG | + | chr1_4:59098937-59098956 | Msa0173730:CDS | 55.0% | |
| !! | AGCATTTCTGAGATGGGGGC+TGG | - | chr1_4:59099329-59099348 | None:intergenic | 55.0% |
| !!! | GGTGAGGTTTTTCAGGAGGG+TGG | + | chr1_4:59100176-59100195 | Msa0173730:CDS | 55.0% |
| ! | GGTCCGCGTTTTGTCTCCAA+TGG | - | chr1_4:59101791-59101810 | None:intergenic | 55.0% |
| ACGCGGACCATTGACGAATG+TGG | + | chr1_4:59101802-59101821 | Msa0173730:CDS | 55.0% | |
| GGTTTCCGAGGAAGAGTCCG+AGG | - | chr1_4:59098938-59098957 | None:intergenic | 60.0% | |
| TCTCAGCAGTCCGGTTTCCG+AGG | - | chr1_4:59098950-59098969 | None:intergenic | 60.0% | |
| !! | GGTAACGGAAATGAGGGGGC+TGG | + | chr1_4:59099271-59099290 | Msa0173730:intron | 60.0% |
| ! | GGGGCTGGTGCAATGTAGCT+CGG | + | chr1_4:59099286-59099305 | Msa0173730:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 59098633 | 59102344 | 59098633 | ID=Msa0173730;Name=Msa0173730 |
| chr1_4 | mRNA | 59098633 | 59102344 | 59098633 | ID=Msa0173730-mRNA-1;Parent=Msa0173730;Name=Msa0173730-mRNA-1;_AED=0.12;_eAED=0.12;_QI=119|1|1|1|1|1|9|239|506 |
| chr1_4 | exon | 59098633 | 59098793 | 59098633 | ID=Msa0173730-mRNA-1:exon:18486;Parent=Msa0173730-mRNA-1 |
| chr1_4 | exon | 59098885 | 59098998 | 59098885 | ID=Msa0173730-mRNA-1:exon:18487;Parent=Msa0173730-mRNA-1 |
| chr1_4 | exon | 59100036 | 59100371 | 59100036 | ID=Msa0173730-mRNA-1:exon:18488;Parent=Msa0173730-mRNA-1 |
| chr1_4 | exon | 59100483 | 59100551 | 59100483 | ID=Msa0173730-mRNA-1:exon:18489;Parent=Msa0173730-mRNA-1 |
| chr1_4 | exon | 59100645 | 59100716 | 59100645 | ID=Msa0173730-mRNA-1:exon:18490;Parent=Msa0173730-mRNA-1 |
| chr1_4 | exon | 59100832 | 59100960 | 59100832 | ID=Msa0173730-mRNA-1:exon:18491;Parent=Msa0173730-mRNA-1 |
| chr1_4 | exon | 59101070 | 59101150 | 59101070 | ID=Msa0173730-mRNA-1:exon:18492;Parent=Msa0173730-mRNA-1 |
| chr1_4 | exon | 59101348 | 59101506 | 59101348 | ID=Msa0173730-mRNA-1:exon:18493;Parent=Msa0173730-mRNA-1 |
| chr1_4 | exon | 59101587 | 59102344 | 59101587 | ID=Msa0173730-mRNA-1:exon:18494;Parent=Msa0173730-mRNA-1 |
| chr1_4 | five_prime_UTR | 59098633 | 59098751 | 59098633 | ID=Msa0173730-mRNA-1:five_prime_utr;Parent=Msa0173730-mRNA-1 |
| chr1_4 | CDS | 59098752 | 59098793 | 59098752 | ID=Msa0173730-mRNA-1:cds;Parent=Msa0173730-mRNA-1 |
| chr1_4 | CDS | 59098885 | 59098998 | 59098885 | ID=Msa0173730-mRNA-1:cds;Parent=Msa0173730-mRNA-1 |
| chr1_4 | CDS | 59100036 | 59100371 | 59100036 | ID=Msa0173730-mRNA-1:cds;Parent=Msa0173730-mRNA-1 |
| chr1_4 | CDS | 59100483 | 59100551 | 59100483 | ID=Msa0173730-mRNA-1:cds;Parent=Msa0173730-mRNA-1 |
| chr1_4 | CDS | 59100645 | 59100716 | 59100645 | ID=Msa0173730-mRNA-1:cds;Parent=Msa0173730-mRNA-1 |
| chr1_4 | CDS | 59100832 | 59100960 | 59100832 | ID=Msa0173730-mRNA-1:cds;Parent=Msa0173730-mRNA-1 |
| chr1_4 | CDS | 59101070 | 59101150 | 59101070 | ID=Msa0173730-mRNA-1:cds;Parent=Msa0173730-mRNA-1 |
| chr1_4 | CDS | 59101348 | 59101506 | 59101348 | ID=Msa0173730-mRNA-1:cds;Parent=Msa0173730-mRNA-1 |
| chr1_4 | CDS | 59101587 | 59102105 | 59101587 | ID=Msa0173730-mRNA-1:cds;Parent=Msa0173730-mRNA-1 |
| chr1_4 | three_prime_UTR | 59102106 | 59102344 | 59102106 | ID=Msa0173730-mRNA-1:three_prime_utr;Parent=Msa0173730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
