Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030370 | XP_003591301.1 | 98.416 | 505 | 8 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1017 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030370 | sp|Q9M115|ZDH16_ARATH | 63.230 | 514 | 170 | 9 | 2 | 505 | 4 | 508 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030370 | G7IBQ1 | 98.416 | 505 | 8 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1017 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0030370 | 0.825236 | 5.233102e-54 | -8.615850e-47 |
| Msa0021500 | Msa0030370 | 0.814897 | 1.218969e-51 | -8.615850e-47 |
| Msa0028420 | Msa0030370 | 0.832106 | 1.142257e-55 | -8.615850e-47 |
| Msa0030370 | Msa0048510 | 0.819131 | 1.363995e-52 | -8.615850e-47 |
| Msa0030370 | Msa0049760 | 0.812119 | 4.976308e-51 | -8.615850e-47 |
| Msa0030370 | Msa0052480 | 0.832167 | 1.103438e-55 | -8.615850e-47 |
| Msa0030370 | Msa0054690 | 0.828361 | 9.383636e-55 | -8.615850e-47 |
| Msa0030370 | Msa0077560 | 0.800149 | 1.650285e-48 | -8.615850e-47 |
| Msa0030370 | Msa0081520 | 0.820236 | 7.632860e-53 | -8.615850e-47 |
| Msa0030370 | Msa0081570 | 0.941485 | 3.834171e-101 | -8.615850e-47 |
| Msa0030370 | Msa0092790 | 0.806564 | 7.736825e-50 | -8.615850e-47 |
| Msa0030370 | Msa0094780 | 0.835265 | 1.855459e-56 | -8.615850e-47 |
| Msa0030370 | Msa0097670 | 0.808961 | 2.394423e-50 | -8.615850e-47 |
| Msa0030370 | Msa0097890 | 0.818115 | 2.319045e-52 | -8.615850e-47 |
| Msa0030370 | Msa0123070 | 0.801601 | 8.337243e-49 | -8.615850e-47 |
| Msa0030370 | Msa0136650 | 0.824308 | 8.660219e-54 | -8.615850e-47 |
| Msa0030370 | Msa0168500 | 0.811522 | 6.712020e-51 | -8.615850e-47 |
| Msa0030370 | Msa0173730 | 0.949187 | 2.113474e-107 | -8.615850e-47 |
| Msa0030370 | Msa0173810 | 0.956195 | 5.226841e-114 | -8.615850e-47 |
| Msa0030370 | Msa0173890 | 0.802936 | 4.428432e-49 | -8.615850e-47 |
| Msa0030370 | Msa0174450 | 0.816750 | 4.707695e-52 | -8.615850e-47 |
| Msa0030370 | Msa0182190 | 0.821123 | 4.773845e-53 | -8.615850e-47 |
| Msa0030370 | Msa0182240 | 0.814495 | 1.496522e-51 | -8.615850e-47 |
| Msa0030370 | Msa0190110 | 0.814162 | 1.772795e-51 | -8.615850e-47 |
| Msa0030370 | Msa0190570 | 0.851201 | 1.035379e-60 | -8.615850e-47 |
| Msa0030370 | Msa0200050 | 0.811292 | 7.530809e-51 | -8.615850e-47 |
| Msa0030370 | Msa0213030 | 0.813407 | 2.600132e-51 | -8.615850e-47 |
| Msa0030370 | Msa0221000 | 0.818556 | 1.842907e-52 | -8.615850e-47 |
| Msa0030370 | Msa0222560 | 0.804146 | 2.484984e-49 | -8.615850e-47 |
| Msa0030370 | Msa0225100 | 0.800590 | 1.341976e-48 | -8.615850e-47 |
| Msa0030370 | Msa0225860 | 0.858267 | 9.260452e-63 | -8.615850e-47 |
| Msa0030370 | Msa0242590 | 0.838388 | 2.961503e-57 | -8.615850e-47 |
| Msa0030370 | Msa0247940 | 0.804257 | 2.355549e-49 | -8.615850e-47 |
| Msa0030370 | Msa0260510 | 0.852984 | 3.223248e-61 | -8.615850e-47 |
| Msa0030370 | Msa0267110 | 0.801180 | 1.017065e-48 | -8.615850e-47 |
| Msa0030370 | Msa0271880 | 0.811745 | 6.003583e-51 | -8.615850e-47 |
| Msa0030370 | Msa0280790 | 0.815204 | 1.041973e-51 | -8.615850e-47 |
| Msa0030370 | Msa0287740 | 0.810356 | 1.200766e-50 | -8.615850e-47 |
| Msa0030370 | Msa0292400 | 0.801128 | 1.042243e-48 | -8.615850e-47 |
| Msa0030370 | Msa0298470 | 0.854263 | 1.383009e-61 | -8.615850e-47 |
| Msa0030370 | Msa0300270 | 0.806967 | 6.361487e-50 | -8.615850e-47 |
| Msa0030370 | Msa0300320 | 0.806163 | 9.398121e-50 | -8.615850e-47 |
| Msa0030370 | Msa0310850 | 0.820999 | 5.096843e-53 | -8.615850e-47 |
| Msa0030370 | Msa0330380 | 0.838800 | 2.319033e-57 | -8.615850e-47 |
| Msa0030370 | Msa0337700 | 0.820023 | 8.537797e-53 | -8.615850e-47 |
| Msa0030370 | Msa0339500 | 0.806692 | 7.271615e-50 | -8.615850e-47 |
| Msa0030370 | Msa0339650 | 0.807790 | 4.256202e-50 | -8.615850e-47 |
| Msa0030370 | Msa0340500 | 0.871196 | 8.213979e-67 | -8.615850e-47 |
| Msa0030370 | Msa0369790 | 0.808145 | 3.575289e-50 | -8.615850e-47 |
| Msa0030370 | Msa0371030 | 0.817507 | 3.182244e-52 | -8.615850e-47 |
| Msa0030370 | Msa0378720 | 0.820565 | 6.414550e-53 | -8.615850e-47 |
| Msa0030370 | Msa0380620 | 0.812907 | 3.346831e-51 | -8.615850e-47 |
| Msa0030370 | Msa0390970 | 0.810367 | 1.194343e-50 | -8.615850e-47 |
| Msa0030370 | Msa0419540 | 0.806412 | 8.332131e-50 | -8.615850e-47 |
| Msa0030370 | Msa0428370 | 0.819560 | 1.089049e-52 | -8.615850e-47 |
| Msa0030370 | Msa0430260 | 0.824052 | 9.948130e-54 | -8.615850e-47 |
| Msa0030370 | Msa0464000 | 0.805874 | 1.081404e-49 | -8.615850e-47 |
| Msa0030370 | Msa0474730 | 0.819697 | 1.013894e-52 | -8.615850e-47 |
| Msa0030370 | Msa0481890 | 0.825226 | 5.261566e-54 | -8.615850e-47 |
| Msa0030370 | Msa0483100 | 0.830371 | 3.049512e-55 | -8.615850e-47 |
| Msa0030370 | Msa0484380 | 0.803604 | 3.219967e-49 | -8.615850e-47 |
| Msa0030370 | Msa0500380 | 0.809003 | 2.345692e-50 | -8.615850e-47 |
| Msa0030370 | Msa0509550 | 0.806645 | 7.438625e-50 | -8.615850e-47 |
| Msa0030370 | Msa0530780 | 0.801514 | 8.685041e-49 | -8.615850e-47 |
| Msa0030370 | Msa0532070 | 0.803312 | 3.701176e-49 | -8.615850e-47 |
| Msa0030370 | Msa0534720 | 0.814093 | 1.836075e-51 | -8.615850e-47 |
| Msa0030370 | Msa0548470 | 0.812150 | 4.901121e-51 | -8.615850e-47 |
| Msa0030370 | Msa0567170 | 0.864640 | 1.051592e-64 | -8.615850e-47 |
| Msa0030370 | Msa0573850 | 0.811277 | 7.589033e-51 | -8.615850e-47 |
| Msa0030370 | Msa0580370 | 0.867126 | 1.721737e-65 | -8.615850e-47 |
| Msa0030370 | Msa0583830 | 0.821056 | 4.945532e-53 | -8.615850e-47 |
| Msa0030370 | Msa0590830 | 0.814827 | 1.263483e-51 | -8.615850e-47 |
| Msa0030370 | Msa0608330 | 0.803189 | 3.924576e-49 | -8.615850e-47 |
| Msa0030370 | Msa0624900 | 0.853518 | 2.266512e-61 | -8.615850e-47 |
| Msa0030370 | Msa0626450 | 0.817229 | 3.675480e-52 | -8.615850e-47 |
| Msa0030370 | Msa0626490 | 0.814308 | 1.646208e-51 | -8.615850e-47 |
| Msa0030370 | Msa0658640 | 0.870749 | 1.153395e-66 | -8.615850e-47 |
| Msa0030370 | Msa0661150 | 0.825514 | 4.496051e-54 | -8.615850e-47 |
| Msa0030370 | Msa0664600 | 0.818186 | 2.235510e-52 | -8.615850e-47 |
| Msa0030370 | Msa0666700 | 0.826210 | 3.073227e-54 | -8.615850e-47 |
| Msa0030370 | Msa0683570 | 0.809458 | 1.873194e-50 | -8.615850e-47 |
| Msa0030370 | Msa0703600 | 0.845787 | 3.266716e-59 | -8.615850e-47 |
| Msa0030370 | Msa0709200 | 0.847112 | 1.420542e-59 | -8.615850e-47 |
| Msa0030370 | Msa0709440 | 0.824080 | 9.796558e-54 | -8.615850e-47 |
| Msa0030370 | Msa0721080 | 0.813459 | 2.532275e-51 | -8.615850e-47 |
| Msa0030370 | Msa0725770 | 0.804140 | 2.491777e-49 | -8.615850e-47 |
| Msa0030370 | Msa0735780 | 0.839815 | 1.264133e-57 | -8.615850e-47 |
| Msa0030370 | Msa0741220 | 0.803029 | 4.235299e-49 | -8.615850e-47 |
| Msa0030370 | Msa0749890 | 0.801673 | 8.059520e-49 | -8.615850e-47 |
| Msa0030370 | Msa0761670 | 0.814455 | 1.527433e-51 | -8.615850e-47 |
| Msa0030370 | Msa0777750 | 0.809133 | 2.199438e-50 | -8.615850e-47 |
| Msa0030370 | Msa0795870 | 0.864884 | 8.814756e-65 | -8.615850e-47 |
| Msa0030370 | Msa0823820 | 0.801518 | 8.671041e-49 | -8.615850e-47 |
| Msa0030370 | Msa0824450 | 0.847281 | 1.277228e-59 | -8.615850e-47 |
| Msa0030370 | Msa0830130 | 0.813013 | 3.172863e-51 | -8.615850e-47 |
| Msa0030370 | Msa0830460 | 0.822433 | 2.375006e-53 | -8.615850e-47 |
| Msa0030370 | Msa0833650 | 0.865921 | 4.157915e-65 | -8.615850e-47 |
| Msa0030370 | Msa0861510 | 0.819259 | 1.275593e-52 | -8.615850e-47 |
| Msa0030370 | Msa0861600 | 0.826599 | 2.483647e-54 | -8.615850e-47 |
| Msa0030370 | Msa0863010 | 0.806012 | 1.011488e-49 | -8.615850e-47 |
| Msa0030370 | Msa0869780 | 0.800727 | 1.258073e-48 | -8.615850e-47 |
| Msa0030370 | Msa0878280 | 0.814699 | 1.348623e-51 | -8.615850e-47 |
| Msa0030370 | Msa0938820 | 0.805862 | 1.087417e-49 | -8.615850e-47 |
| Msa0030370 | Msa0941170 | 0.809149 | 2.182760e-50 | -8.615850e-47 |
| Msa0030370 | Msa0966320 | 0.800665 | 1.295592e-48 | -8.615850e-47 |
| Msa0030370 | Msa0967870 | 0.805833 | 1.102831e-49 | -8.615850e-47 |
| Msa0030370 | Msa0978300 | 0.805722 | 1.163488e-49 | -8.615850e-47 |
| Msa0030370 | Msa0981320 | 0.813737 | 2.199847e-51 | -8.615850e-47 |
| Msa0030370 | Msa0997920 | 0.824650 | 7.196423e-54 | -8.615850e-47 |
| Msa0030370 | Msa1001740 | 0.802921 | 4.459227e-49 | -8.615850e-47 |
| Msa0030370 | Msa1019430 | 0.801043 | 1.084426e-48 | -8.615850e-47 |
| Msa0030370 | Msa1037540 | 0.808149 | 3.569972e-50 | -8.615850e-47 |
| Msa0030370 | Msa1042190 | 0.801451 | 8.949570e-49 | -8.615850e-47 |
| Msa0030370 | Msa1045140 | 0.803011 | 4.272978e-49 | -8.615850e-47 |
| Msa0030370 | Msa1051900 | 0.802256 | 6.116071e-49 | -8.615850e-47 |
| Msa0030370 | Msa1081390 | 0.801937 | 7.112467e-49 | -8.615850e-47 |
| Msa0030370 | Msa1084530 | 0.823507 | 1.334548e-53 | -8.615850e-47 |
| Msa0030370 | Msa1094010 | 0.803810 | 2.918186e-49 | -8.615850e-47 |
| Msa0030370 | Msa1116220 | 0.803802 | 2.930142e-49 | -8.615850e-47 |
| Msa0030370 | Msa1125820 | 0.821132 | 4.749826e-53 | -8.615850e-47 |
| Msa0030370 | Msa1125990 | 0.826138 | 3.197967e-54 | -8.615850e-47 |
| Msa0030370 | Msa1132530 | 0.812910 | 3.341645e-51 | -8.615850e-47 |
| Msa0030370 | Msa1132840 | 0.867719 | 1.111897e-65 | -8.615850e-47 |
| Msa0030370 | Msa1155170 | -0.801743 | 7.797291e-49 | -8.615850e-47 |
| Msa0030370 | Msa1160920 | 0.805698 | 1.177109e-49 | -8.615850e-47 |
| Msa0030370 | Msa1171290 | 0.824927 | 6.189938e-54 | -8.615850e-47 |
| Msa0030370 | Msa1177320 | 0.815010 | 1.150957e-51 | -8.615850e-47 |
| Msa0030370 | Msa1186020 | 0.802143 | 6.451961e-49 | -8.615850e-47 |
| Msa0030370 | Msa1192570 | 0.841270 | 5.261578e-58 | -8.615850e-47 |
| Msa0030370 | Msa1200890 | 0.829267 | 5.665095e-55 | -8.615850e-47 |
| Msa0030370 | Msa1208950 | 0.826245 | 3.015471e-54 | -8.615850e-47 |
| Msa0030370 | Msa1215870 | 0.835298 | 1.820251e-56 | -8.615850e-47 |
| Msa0030370 | Msa1224930 | 0.809179 | 2.150309e-50 | -8.615850e-47 |
| Msa0030370 | Msa1226520 | 0.866707 | 2.341448e-65 | -8.615850e-47 |
| Msa0030370 | Msa1236410 | 0.807492 | 4.923041e-50 | -8.615850e-47 |
| Msa0030370 | Msa1277150 | 0.805959 | 1.037500e-49 | -8.615850e-47 |
| Msa0030370 | Msa1277220 | 0.800079 | 1.705102e-48 | -8.615850e-47 |
| Msa0030370 | Msa1307630 | 0.812957 | 3.264348e-51 | -8.615850e-47 |
| Msa0030370 | Msa1320670 | 0.827700 | 1.353582e-54 | -8.615850e-47 |
| Msa0030370 | Msa1343170 | 0.839403 | 1.618405e-57 | -8.615850e-47 |
| Msa0030370 | Msa1343180 | 0.841371 | 4.948991e-58 | -8.615850e-47 |
| Msa0030370 | Msa1359690 | 0.838284 | 3.150226e-57 | -8.615850e-47 |
| Msa0030370 | Msa1392580 | 0.806309 | 8.757581e-50 | -8.615850e-47 |
| Msa0030370 | Msa1395190 | 0.804299 | 2.308916e-49 | -8.615850e-47 |
| Msa0030370 | Msa1396030 | 0.800559 | 1.361853e-48 | -8.615850e-47 |
| Msa0030370 | Msa1397400 | 0.862677 | 4.277052e-64 | -8.615850e-47 |
| Msa0030370 | Msa1420950 | 0.862514 | 4.803581e-64 | -8.615850e-47 |
| Msa0030370 | Msa1427200 | 0.804234 | 2.381919e-49 | -8.615850e-47 |
| Msa0030370 | Msa1440880 | 0.845060 | 5.139543e-59 | -8.615850e-47 |
| Msa0030370 | Msa1440960 | 0.816379 | 5.701354e-52 | -8.615850e-47 |
| Msa0030370 | Msa1446810 | 0.825840 | 3.764157e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030370 | MtrunA17_Chr1g0193941 | 98.416 | 505 | 8 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1017 |
| Msa0030370 | MtrunA17_Chr3g0144181 | 34.937 | 395 | 235 | 7 | 2 | 393 | 3 | 378 | 8.17e-69 | 232 |
| Msa0030370 | MtrunA17_Chr4g0038841 | 37.346 | 324 | 175 | 5 | 1 | 298 | 2 | 323 | 2.02e-67 | 230 |
| Msa0030370 | MtrunA17_Chr4g0042821 | 27.883 | 581 | 311 | 12 | 1 | 488 | 1 | 566 | 2.13e-62 | 214 |
| Msa0030370 | MtrunA17_Chr5g0418141 | 31.368 | 475 | 246 | 13 | 1 | 421 | 1 | 449 | 4.56e-57 | 200 |
| Msa0030370 | MtrunA17_Chr6g0462021 | 27.228 | 202 | 121 | 5 | 155 | 344 | 149 | 336 | 1.91e-14 | 75.5 |
| Msa0030370 | MtrunA17_Chr4g0064931 | 40.909 | 88 | 46 | 2 | 139 | 220 | 353 | 440 | 4.19e-14 | 75.1 |
| Msa0030370 | MtrunA17_Chr7g0273371 | 28.070 | 228 | 139 | 7 | 114 | 328 | 127 | 342 | 2.57e-13 | 71.6 |
| Msa0030370 | MtrunA17_Chr6g0464751 | 30.075 | 133 | 83 | 3 | 155 | 287 | 138 | 260 | 3.52e-12 | 68.2 |
| Msa0030370 | MtrunA17_Chr1g0201631 | 30.075 | 133 | 84 | 3 | 155 | 287 | 135 | 258 | 3.69e-12 | 68.2 |
| Msa0030370 | MtrunA17_Chr4g0009911 | 26.816 | 179 | 100 | 5 | 141 | 305 | 87 | 248 | 5.55e-12 | 66.6 |
| Msa0030370 | MtrunA17_Chr3g0131931 | 28.571 | 133 | 85 | 3 | 155 | 287 | 150 | 272 | 5.63e-12 | 67.8 |
| Msa0030370 | MtrunA17_Chr4g0049351 | 39.796 | 98 | 51 | 4 | 157 | 251 | 363 | 455 | 6.45e-12 | 67.8 |
| Msa0030370 | MtrunA17_Chr7g0255151 | 27.068 | 133 | 81 | 2 | 155 | 287 | 162 | 278 | 2.00e-11 | 66.2 |
| Msa0030370 | MtrunA17_Chr7g0251761 | 29.545 | 132 | 81 | 3 | 157 | 287 | 151 | 271 | 2.63e-11 | 65.5 |
| Msa0030370 | MtrunA17_Chr1g0199411 | 33.824 | 136 | 70 | 5 | 169 | 303 | 108 | 224 | 4.46e-11 | 63.5 |
| Msa0030370 | MtrunA17_Chr5g0406311 | 42.373 | 59 | 34 | 0 | 158 | 216 | 170 | 228 | 5.65e-11 | 63.9 |
| Msa0030370 | MtrunA17_Chr1g0211241 | 45.000 | 60 | 33 | 0 | 157 | 216 | 462 | 521 | 6.90e-11 | 64.7 |
| Msa0030370 | MtrunA17_Chr7g0255161 | 27.407 | 135 | 89 | 2 | 155 | 287 | 89 | 216 | 7.22e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030370 | AT4G01730.1 | 63.230 | 514 | 170 | 9 | 2 | 505 | 4 | 508 | 0.0 | 543 |
| Msa0030370 | AT2G33640.1 | 34.750 | 400 | 209 | 9 | 2 | 370 | 3 | 381 | 3.83e-71 | 237 |
| Msa0030370 | AT3G22180.1 | 36.170 | 329 | 179 | 5 | 1 | 306 | 2 | 322 | 4.60e-65 | 224 |
| Msa0030370 | AT4G15080.2 | 31.743 | 482 | 253 | 11 | 1 | 425 | 2 | 464 | 1.78e-64 | 222 |
| Msa0030370 | AT4G15080.1 | 31.743 | 482 | 253 | 11 | 1 | 425 | 2 | 464 | 1.78e-64 | 222 |
| Msa0030370 | AT1G69420.1 | 32.075 | 424 | 232 | 11 | 1 | 385 | 1 | 407 | 1.16e-61 | 212 |
| Msa0030370 | AT1G69420.2 | 32.075 | 424 | 232 | 11 | 1 | 385 | 1 | 407 | 1.16e-61 | 212 |
| Msa0030370 | AT3G26935.1 | 32.090 | 134 | 79 | 3 | 155 | 287 | 148 | 270 | 1.54e-15 | 79.3 |
| Msa0030370 | AT3G48760.1 | 27.228 | 202 | 128 | 5 | 155 | 348 | 157 | 347 | 6.20e-15 | 77.4 |
| Msa0030370 | AT5G20350.1 | 36.154 | 130 | 74 | 4 | 92 | 221 | 316 | 436 | 1.05e-13 | 74.3 |
| Msa0030370 | AT5G41060.3 | 29.851 | 134 | 82 | 3 | 155 | 287 | 79 | 201 | 2.57e-13 | 71.6 |
| Msa0030370 | AT5G41060.4 | 29.851 | 134 | 82 | 3 | 155 | 287 | 79 | 201 | 2.57e-13 | 71.6 |
| Msa0030370 | AT3G04970.3 | 42.105 | 76 | 39 | 2 | 153 | 224 | 66 | 140 | 2.73e-13 | 71.2 |
| Msa0030370 | AT2G14255.1 | 43.836 | 73 | 41 | 0 | 148 | 220 | 355 | 427 | 2.82e-13 | 72.8 |
| Msa0030370 | AT5G41060.1 | 29.851 | 134 | 82 | 3 | 155 | 287 | 146 | 268 | 4.52e-13 | 71.6 |
| Msa0030370 | AT3G56930.1 | 28.148 | 135 | 83 | 3 | 155 | 287 | 145 | 267 | 4.77e-13 | 71.6 |
| Msa0030370 | AT4G24630.1 | 30.075 | 133 | 83 | 3 | 155 | 287 | 135 | 257 | 5.58e-13 | 71.2 |
| Msa0030370 | AT5G41060.2 | 29.851 | 134 | 82 | 3 | 155 | 287 | 131 | 253 | 5.76e-13 | 70.9 |
| Msa0030370 | AT3G04970.2 | 43.836 | 73 | 36 | 2 | 153 | 221 | 153 | 224 | 6.18e-13 | 70.1 |
| Msa0030370 | AT3G04970.1 | 42.105 | 76 | 39 | 2 | 153 | 224 | 153 | 227 | 7.68e-13 | 70.5 |
| Msa0030370 | AT5G50020.3 | 30.075 | 133 | 83 | 4 | 155 | 287 | 135 | 257 | 1.85e-12 | 69.7 |
| Msa0030370 | AT5G50020.2 | 30.075 | 133 | 83 | 4 | 155 | 287 | 165 | 287 | 2.24e-12 | 69.3 |
| Msa0030370 | AT5G04270.1 | 29.921 | 127 | 75 | 3 | 169 | 295 | 105 | 217 | 2.58e-12 | 67.8 |
| Msa0030370 | AT3G09320.1 | 29.677 | 155 | 95 | 4 | 141 | 293 | 80 | 222 | 6.76e-12 | 66.6 |
| Msa0030370 | AT4G22750.1 | 26.291 | 213 | 135 | 5 | 85 | 285 | 33 | 235 | 1.97e-11 | 65.5 |
| Msa0030370 | AT5G05070.1 | 27.820 | 133 | 82 | 3 | 155 | 287 | 170 | 288 | 6.48e-11 | 64.7 |
Find 117 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGACTTGAAAGCCTTAA+TGG | 0.179701 | 1_1:-56700045 | None:intergenic |
| CCCCTTTGATCAACACAAAA+AGG | 0.201505 | 1_1:+56699785 | Msa0030370:CDS |
| ATGTATAAATTTGATTTATA+AGG | 0.203769 | 1_1:-56700337 | None:intergenic |
| CTTAACTATGGATTCATTAT+TGG | 0.227661 | 1_1:+56698296 | Msa0030370:CDS |
| AGAGAACTACCTTTCGTATT+AGG | 0.235966 | 1_1:-56699290 | None:intergenic |
| CCTGCAGAAAATCTTCTTCT+TGG | 0.247950 | 1_1:-56700063 | None:intergenic |
| GCAATTCCTAAGCTTAACTA+TGG | 0.264138 | 1_1:+56698284 | Msa0030370:CDS |
| TTTCTTCTTCTTCTTGAAAC+TGG | 0.265760 | 1_1:-56698246 | None:intergenic |
| AATATTGGCAATGAGGGATT+TGG | 0.269143 | 1_1:+56699982 | Msa0030370:CDS |
| CATGGGGATTTATAGTTTCC+TGG | 0.270284 | 1_1:+56697043 | Msa0030370:CDS |
| ACGTCCTCTTCATCCTTTAC+AGG | 0.290395 | 1_1:+56696911 | Msa0030370:CDS |
| AACTTCATGTATCACCATTA+AGG | 0.298327 | 1_1:+56700031 | Msa0030370:CDS |
| CTTAGGAATTGCATTCCTTT+TGG | 0.301238 | 1_1:-56698273 | None:intergenic |
| AGTGGTTGAATAACTGTATT+GGG | 0.305251 | 1_1:+56698795 | Msa0030370:intron |
| GCATTGCCTCTGAAAATTAC+AGG | 0.312239 | 1_1:-56700430 | None:intergenic |
| AATTACCATGAAGGAAAATA+TGG | 0.329971 | 1_1:-56697132 | None:intergenic |
| CTGCAATTGCGATATTTATC+AGG | 0.330793 | 1_1:+56699003 | Msa0030370:CDS |
| TTCATAATAGTAACAACGTT+TGG | 0.332999 | 1_1:-56700487 | None:intergenic |
| CAGTGGTTGAATAACTGTAT+TGG | 0.338312 | 1_1:+56698794 | Msa0030370:intron |
| AAATACAATGCCTACGATCT+TGG | 0.340037 | 1_1:-56700246 | None:intergenic |
| AATACAATGCCTACGATCTT+GGG | 0.349348 | 1_1:-56700245 | None:intergenic |
| AATGAGAACTAACCATTAAC+AGG | 0.349646 | 1_1:-56698859 | None:intergenic |
| AGAGAATGAAGCCATGGAAT+TGG | 0.360067 | 1_1:+56699538 | Msa0030370:CDS |
| GCTTATAGTTCAGCTGCATT+GGG | 0.362020 | 1_1:+56699243 | Msa0030370:CDS |
| AGCTTATAGTTCAGCTGCAT+TGG | 0.379994 | 1_1:+56699242 | Msa0030370:CDS |
| AAGGGTTTGATCACCATTGC+AGG | 0.380383 | 1_1:+56698681 | Msa0030370:CDS |
| CTGAAAATTACAGGTCCATT+TGG | 0.392432 | 1_1:-56700421 | None:intergenic |
| TTGAAAATGTGACAGTTTGT+AGG | 0.405221 | 1_1:+56697020 | Msa0030370:intron |
| GAATAGAAAAGGAGCTTCAT+AGG | 0.409924 | 1_1:+56699045 | Msa0030370:CDS |
| TCTTTCATAACAAATGGAAA+TGG | 0.412686 | 1_1:-56698431 | None:intergenic |
| ATATTGGCAATGAGGGATTT+GGG | 0.413742 | 1_1:+56699983 | Msa0030370:CDS |
| AGCTTGAAACACATATTTCC+AGG | 0.415244 | 1_1:+56700178 | Msa0030370:CDS |
| TCATCATCTTTCATAACAAA+TGG | 0.417582 | 1_1:-56698437 | None:intergenic |
| TCAGGTGCTTTGTGGATAAG+AGG | 0.417899 | 1_1:+56699021 | Msa0030370:CDS |
| AATGAACTGTGCTCCCTCAT+TGG | 0.434720 | 1_1:-56699907 | None:intergenic |
| ATGTCGTCCTCTTTAAGATC+AGG | 0.449853 | 1_1:-56698473 | None:intergenic |
| GTGTGTTTCTATACTTTCCT+CGG | 0.453785 | 1_1:+56697068 | Msa0030370:CDS |
| GAGGACCTATGACTATATTC+TGG | 0.454122 | 1_1:+56699505 | Msa0030370:CDS |
| CTTTCATAACAAATGGAAAT+GGG | 0.456489 | 1_1:-56698430 | None:intergenic |
| TCAGATGACTATTACACATA+TGG | 0.457257 | 1_1:-56699105 | None:intergenic |
| ATGAATCCATAGTTAAGCTT+AGG | 0.465933 | 1_1:-56698290 | None:intergenic |
| TTGAAACTGGTTCTGTCTGT+AGG | 0.467295 | 1_1:-56698233 | None:intergenic |
| TGTTCAGTTATCAGCAAAGA+TGG | 0.472599 | 1_1:+56700210 | Msa0030370:CDS |
| GATATTTATCAGGTGCTTTG+TGG | 0.473980 | 1_1:+56699013 | Msa0030370:CDS |
| TTTCTGTTTACTTTAAACAT+AGG | 0.477009 | 1_1:+56700388 | Msa0030370:three_prime_UTR |
| TTATAAATCAAATTTATACA+TGG | 0.477535 | 1_1:+56700339 | Msa0030370:three_prime_UTR |
| TTCATTAAGACCTCTTCCAT+TGG | 0.478810 | 1_1:+56699924 | Msa0030370:CDS |
| AAATTACAGGTCCATTTGGC+TGG | 0.479592 | 1_1:-56700417 | None:intergenic |
| TGAAGTTAGCAGGTGTGTCT+AGG | 0.480378 | 1_1:+56700154 | Msa0030370:CDS |
| ATAGGATAATTCCAGCCAAA+TGG | 0.480414 | 1_1:+56700406 | Msa0030370:three_prime_UTR |
| AAAATCCTTGACATTAGTGT+TGG | 0.485995 | 1_1:-56699623 | None:intergenic |
| AACTGAACATAGAACCTGCC+TGG | 0.487655 | 1_1:-56700196 | None:intergenic |
| CACTCGTCTTCAACGGATCA+AGG | 0.488073 | 1_1:-56698388 | None:intergenic |
| TTCACGTAAGCATTAACCCT+TGG | 0.489341 | 1_1:+56699809 | Msa0030370:CDS |
| ACTTGTAATCGTTGCGTTGA+AGG | 0.491089 | 1_1:+56698662 | Msa0030370:CDS |
| ATGTGACAGTTTGTAGGCAT+GGG | 0.494330 | 1_1:+56697026 | Msa0030370:intron |
| TGTGAACAGCTCATCATTGA+AGG | 0.494729 | 1_1:+56698975 | Msa0030370:intron |
| GGGTGGAAAAGAAGTTGCTT+AGG | 0.494730 | 1_1:+56698345 | Msa0030370:CDS |
| CATTGCCAGAATATAGTCAT+AGG | 0.496409 | 1_1:-56699510 | None:intergenic |
| GGATAAGAGGGGAATAGAAA+AGG | 0.502714 | 1_1:+56699034 | Msa0030370:CDS |
| GTCAACTTTACGAGTTTCCA+AGG | 0.513589 | 1_1:-56699826 | None:intergenic |
| GCTCTTTCTCGTCAACTCAA+CGG | 0.513844 | 1_1:-56696816 | None:intergenic |
| TTTGTTTCATAAAGGGGATG+AGG | 0.518890 | 1_1:+56699486 | Msa0030370:intron |
| CTTGTAATCGTTGCGTTGAA+GGG | 0.519111 | 1_1:+56698663 | Msa0030370:CDS |
| ATGGTGGCAAGAAGTCCTCT+TGG | 0.521474 | 1_1:-56699086 | None:intergenic |
| CAGGTGCTTTGTGGATAAGA+GGG | 0.525174 | 1_1:+56699022 | Msa0030370:CDS |
| ACTTTCCTCGGACTCTTCCT+CGG | 0.525401 | 1_1:+56697080 | Msa0030370:CDS |
| TGAAACACATATTTCCAGGC+AGG | 0.526662 | 1_1:+56700182 | Msa0030370:CDS |
| ACGCGGACCATTGACGAATG+TGG | 0.527722 | 1_1:+56699954 | Msa0030370:CDS |
| TACTTGCAGCTGAGAAAGCA+AGG | 0.530537 | 1_1:+56699863 | Msa0030370:CDS |
| GAAGTTAGCAGGTGTGTCTA+GGG | 0.530558 | 1_1:+56700155 | Msa0030370:CDS |
| TATAAATCAAATTTATACAT+GGG | 0.533955 | 1_1:+56700340 | Msa0030370:three_prime_UTR |
| ACTTGTGCACTCGTCTTCAA+CGG | 0.546561 | 1_1:-56698395 | None:intergenic |
| ACAAATGGAAATGGGAGAAG+AGG | 0.548200 | 1_1:-56698422 | None:intergenic |
| ACACTATGAGACGCCATGGT+TGG | 0.551650 | 1_1:+56696886 | Msa0030370:exon |
| CAATGCTGTCATCTGATGAA+AGG | 0.552272 | 1_1:-56699580 | None:intergenic |
| GTTGAAGACGAGTGCACAAG+TGG | 0.554243 | 1_1:+56698397 | Msa0030370:CDS |
| AATGTGACAGTTTGTAGGCA+TGG | 0.560320 | 1_1:+56697025 | Msa0030370:intron |
| ATCAAATGACTCCAATTCCA+TGG | 0.560589 | 1_1:-56699549 | None:intergenic |
| CAGCTGAGAAAGCAAGGGAA+AGG | 0.566987 | 1_1:+56699869 | Msa0030370:CDS |
| GAATAGATAAATTACCATGA+AGG | 0.567650 | 1_1:-56697141 | None:intergenic |
| TTAGTGTTATCTCAGCAGTT+CGG | 0.574132 | 1_1:-56697106 | None:intergenic |
| TTTACCTGTAAAGGATGAAG+AGG | 0.576281 | 1_1:-56696915 | None:intergenic |
| GAGAGAAGAGAATGAAGCCA+TGG | 0.580808 | 1_1:+56699532 | Msa0030370:CDS |
| TGTCGTCCCTGATCTTAAAG+AGG | 0.582192 | 1_1:+56698466 | Msa0030370:CDS |
| TTTGTGTTGATCAAAGGGGA+AGG | 0.592051 | 1_1:-56699781 | None:intergenic |
| CGTGCGAGAAAGACCAATGA+GGG | 0.592418 | 1_1:+56699894 | Msa0030370:CDS |
| AAAAGCCAACACTAATGTCA+AGG | 0.594065 | 1_1:+56699618 | Msa0030370:CDS |
| TCACGTTCTCCTAATACGAA+AGG | 0.596273 | 1_1:+56699281 | Msa0030370:CDS |
| AAGTATAGAAACACACCACC+AGG | 0.598487 | 1_1:-56697061 | None:intergenic |
| AACAGATACTGACCCTGCAA+TGG | 0.599614 | 1_1:-56698694 | None:intergenic |
| AGGGTTTGATCACCATTGCA+GGG | 0.600426 | 1_1:+56698682 | Msa0030370:CDS |
| ATACAATGCCTACGATCTTG+GGG | 0.601194 | 1_1:-56700244 | None:intergenic |
| TGTCGTCCTCTTTAAGATCA+GGG | 0.605943 | 1_1:-56698472 | None:intergenic |
| AATGCCTACGATCTTGGGGA+TGG | 0.606261 | 1_1:-56700240 | None:intergenic |
| ATTCATTATTGGTCAGATTG+TGG | 0.609221 | 1_1:+56698307 | Msa0030370:CDS |
| TTATTGGTCAGATTGTGGTG+AGG | 0.621959 | 1_1:+56698312 | Msa0030370:CDS |
| GAACAGCTCATCATTGAAGG+AGG | 0.626679 | 1_1:+56698978 | Msa0030370:intron |
| AACAGCTCATCATTGAAGGA+GGG | 0.627474 | 1_1:+56698979 | Msa0030370:intron |
| GAAGAGGACGTTGCCAACCA+TGG | 0.631280 | 1_1:-56696899 | None:intergenic |
| GATGACTATTACACATATGG+TGG | 0.631412 | 1_1:-56699102 | None:intergenic |
| TGAACCATCCCCAAGATCGT+AGG | 0.633327 | 1_1:+56700236 | Msa0030370:CDS |
| TGTGACAGTTTGTAGGCATG+GGG | 0.633700 | 1_1:+56697027 | Msa0030370:intron |
| TCTCAGCAGTTCGGTTTCCG+AGG | 0.633761 | 1_1:-56697097 | None:intergenic |
| CTTATAGTTCAGCTGCATTG+GGG | 0.635397 | 1_1:+56699244 | Msa0030370:CDS |
| ACTTGCAGCTGAGAAAGCAA+GGG | 0.638549 | 1_1:+56699864 | Msa0030370:CDS |
| ATACACACTATGAGACGCCA+TGG | 0.640263 | 1_1:+56696882 | Msa0030370:exon |
| ATAAGGAAACTATGATACAA+TGG | 0.642983 | 1_1:-56700320 | None:intergenic |
| TCAACTTTACGAGTTTCCAA+GGG | 0.643170 | 1_1:-56699825 | None:intergenic |
| GGGGATTTATAGTTTCCTGG+TGG | 0.645721 | 1_1:+56697046 | Msa0030370:CDS |
| TACCATGAAGGAAAATATGG+AGG | 0.650461 | 1_1:-56697129 | None:intergenic |
| GGTTTCCGAGGAAGAGTCCG+AGG | 0.657144 | 1_1:-56697085 | None:intergenic |
| TCGTGCGAGAAAGACCAATG+AGG | 0.674025 | 1_1:+56699893 | Msa0030370:CDS |
| TCAATCTTGATAGACAACCT+AGG | 0.679060 | 1_1:-56699745 | None:intergenic |
| AGGTGCTTTGTGGATAAGAG+GGG | 0.684044 | 1_1:+56699023 | Msa0030370:CDS |
| CTTCCATTGGAGACAAAACG+CGG | 0.706884 | 1_1:+56699937 | Msa0030370:CDS |
| ATGCTGCTAGAGAATACCGA+TGG | 0.739752 | 1_1:-56700090 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTGATATTTTTTAATTTA+AGG | + | chr1_1:56698012-56698031 | Msa0030370:intron | 10.0% |
| !!! | ATGTATAAATTTGATTTATA+AGG | - | chr1_1:56700340-56700359 | None:intergenic | 10.0% |
| !! | TTATAAATCAAATTTATACA+TGG | + | chr1_1:56700339-56700358 | Msa0030370:three_prime_UTR | 10.0% |
| !! | TATAAATCAAATTTATACAT+GGG | + | chr1_1:56700340-56700359 | Msa0030370:three_prime_UTR | 10.0% |
| !! | AACTAAAATGAAAAATAGAA+AGG | - | chr1_1:56696949-56696968 | None:intergenic | 15.0% |
| !!! | CCATTTTTGAAAAAAAAATA+TGG | - | chr1_1:56697208-56697227 | None:intergenic | 15.0% |
| !!! | CCATATTTTTTTTTCAAAAA+TGG | + | chr1_1:56697205-56697224 | Msa0030370:intron | 15.0% |
| !! | AAGATAATTTAAGCAAAAAA+GGG | - | chr1_1:56697778-56697797 | None:intergenic | 15.0% |
| !!! | TTTTTTGCTTAAATTATCTT+CGG | + | chr1_1:56697778-56697797 | Msa0030370:intron | 15.0% |
| !!! | TTACTAAAGAAATATTTTGA+TGG | - | chr1_1:56697891-56697910 | None:intergenic | 15.0% |
| !!! | CCATTTTTTAAACTTTATAA+AGG | - | chr1_1:56697985-56698004 | None:intergenic | 15.0% |
| !! | CCTTTATAAAGTTTAAAAAA+TGG | + | chr1_1:56697982-56698001 | Msa0030370:intron | 15.0% |
| !!! | TCGTTTTTTGTTTTTGTTTT+TGG | - | chr1_1:56696845-56696864 | None:intergenic | 20.0% |
| !! | AATGAATTCAATTTAGGTAA+CGG | + | chr1_1:56697408-56697427 | Msa0030370:intron | 20.0% |
| !! | AGATAATTTAAGCAAAAAAG+GGG | - | chr1_1:56697777-56697796 | None:intergenic | 20.0% |
| !! | GAAGATAATTTAAGCAAAAA+AGG | - | chr1_1:56697779-56697798 | None:intergenic | 20.0% |
| !! | AAAATGCTTATTTACTAGTT+TGG | - | chr1_1:56697829-56697848 | None:intergenic | 20.0% |
| !! | ATTGATATTCTTACAATTAC+AGG | - | chr1_1:56697855-56697874 | None:intergenic | 20.0% |
| !! | GTCAATATTATATCGTTTAT+CGG | - | chr1_1:56697925-56697944 | None:intergenic | 20.0% |
| !!! | TATTGACTTAAATAGTCTTT+CGG | + | chr1_1:56697938-56697957 | Msa0030370:intron | 20.0% |
| !!! | TTTTTTTTTAATCTTAAGCG+TGG | + | chr1_1:56698565-56698584 | Msa0030370:intron | 20.0% |
| !! | CAGAATTAATGTTAAATAGA+AGG | - | chr1_1:56699172-56699191 | None:intergenic | 20.0% |
| !!! | TTGTTTGATTTGTTTCATAA+AGG | + | chr1_1:56699478-56699497 | Msa0030370:intron | 20.0% |
| !!! | TGTTTGATTTGTTTCATAAA+GGG | + | chr1_1:56699479-56699498 | Msa0030370:intron | 20.0% |
| !! | TTTCTGTTTACTTTAAACAT+AGG | + | chr1_1:56700388-56700407 | Msa0030370:three_prime_UTR | 20.0% |
| ! | AATTACCATGAAGGAAAATA+TGG | - | chr1_1:56697135-56697154 | None:intergenic | 25.0% |
| ! | GAATAGATAAATTACCATGA+AGG | - | chr1_1:56697144-56697163 | None:intergenic | 25.0% |
| ! | GCAATGAATGAATTCAATTT+AGG | + | chr1_1:56697402-56697421 | Msa0030370:intron | 25.0% |
| ! | AAGTAACATTAATGCTTCAT+TGG | + | chr1_1:56697546-56697565 | Msa0030370:intron | 25.0% |
| !!! | CTAAAGAAATATTTTGATGG+AGG | - | chr1_1:56697888-56697907 | None:intergenic | 25.0% |
| !!! | ATAATTTTGTTGTTTTGCAC+AGG | + | chr1_1:56698166-56698185 | Msa0030370:intron | 25.0% |
| ! | CTTAACTATGGATTCATTAT+TGG | + | chr1_1:56698296-56698315 | Msa0030370:CDS | 25.0% |
| ! | CTTTCATAACAAATGGAAAT+GGG | - | chr1_1:56698433-56698452 | None:intergenic | 25.0% |
| ! | TCTTTCATAACAAATGGAAA+TGG | - | chr1_1:56698434-56698453 | None:intergenic | 25.0% |
| ! | TCATCATCTTTCATAACAAA+TGG | - | chr1_1:56698440-56698459 | None:intergenic | 25.0% |
| !!! | GTTTGATTTGTTTCATAAAG+GGG | + | chr1_1:56699480-56699499 | Msa0030370:intron | 25.0% |
| ! | ACGAATGTGGAAAAAAATAT+TGG | + | chr1_1:56699967-56699986 | Msa0030370:CDS | 25.0% |
| ! | GAAAAAAATATTGGCAATGA+GGG | + | chr1_1:56699976-56699995 | Msa0030370:CDS | 25.0% |
| ! | ATAAGGAAACTATGATACAA+TGG | - | chr1_1:56700323-56700342 | None:intergenic | 25.0% |
| !! | GATGATGTTTTTACCTGTAA+AGG | - | chr1_1:56696927-56696946 | None:intergenic | 30.0% |
| TTGAAAATGTGACAGTTTGT+AGG | + | chr1_1:56697020-56697039 | Msa0030370:intron | 30.0% | |
| TAAACATGAGATTAAGCACA+AGG | + | chr1_1:56697240-56697259 | Msa0030370:intron | 30.0% | |
| ! | TGGTTTGAGTCAATTTTCAT+AGG | - | chr1_1:56697363-56697382 | None:intergenic | 30.0% |
| ATTGAATTCATTCATTGCAC+TGG | - | chr1_1:56697400-56697419 | None:intergenic | 30.0% | |
| !! | AATTTAGGTAACGGAAATGA+GGG | + | chr1_1:56697417-56697436 | Msa0030370:intron | 30.0% |
| TTGAAACGCGACATATAATT+TGG | + | chr1_1:56697571-56697590 | Msa0030370:intron | 30.0% | |
| TGAAACGCGACATATAATTT+GGG | + | chr1_1:56697572-56697591 | Msa0030370:intron | 30.0% | |
| ! | TTCCAAAGCGACATATATTT+TGG | + | chr1_1:56697607-56697626 | Msa0030370:intron | 30.0% |
| ! | TCCAAAGCGACATATATTTT+GGG | + | chr1_1:56697608-56697627 | Msa0030370:intron | 30.0% |
| ! | ATCAACTGTTTTCAGTTTCA+AGG | + | chr1_1:56697727-56697746 | Msa0030370:intron | 30.0% |
| TTGCTTAAATTATCTTCGGT+CGG | + | chr1_1:56697782-56697801 | Msa0030370:intron | 30.0% | |
| !!! | TTTGGAGGCTTTTTCAAAAT+AGG | - | chr1_1:56697811-56697830 | None:intergenic | 30.0% |
| ! | ATGCTTATTTACTAGTTTGG+AGG | - | chr1_1:56697826-56697845 | None:intergenic | 30.0% |
| GACTGAATTGATATTTCTCA+AGG | + | chr1_1:56698035-56698054 | Msa0030370:intron | 30.0% | |
| AATTGTTATCAATGTGTGTC+TGG | + | chr1_1:56698108-56698127 | Msa0030370:intron | 30.0% | |
| !! | CAGTTATGTTTTTGTTTGTG+AGG | + | chr1_1:56698195-56698214 | Msa0030370:CDS | 30.0% |
| TTTCTTCTTCTTCTTGAAAC+TGG | - | chr1_1:56698249-56698268 | None:intergenic | 30.0% | |
| AGAAGAAGAAAAAAGCCAAA+AGG | + | chr1_1:56698258-56698277 | Msa0030370:CDS | 30.0% | |
| ATGAATCCATAGTTAAGCTT+AGG | - | chr1_1:56698293-56698312 | None:intergenic | 30.0% | |
| ATTCATTATTGGTCAGATTG+TGG | + | chr1_1:56698307-56698326 | Msa0030370:CDS | 30.0% | |
| ACTCTGTTTATATGTGAATC+AGG | + | chr1_1:56698613-56698632 | Msa0030370:intron | 30.0% | |
| !!! | TTTTCTTCTCTTGTTTTCAG+TGG | + | chr1_1:56698777-56698796 | Msa0030370:intron | 30.0% |
| AGTGGTTGAATAACTGTATT+GGG | + | chr1_1:56698795-56698814 | Msa0030370:intron | 30.0% | |
| AATGAGAACTAACCATTAAC+AGG | - | chr1_1:56698862-56698881 | None:intergenic | 30.0% | |
| TCAGATGACTATTACACATA+TGG | - | chr1_1:56699108-56699127 | None:intergenic | 30.0% | |
| ATAGTCATCTGAATTGTTTC+TGG | + | chr1_1:56699116-56699135 | Msa0030370:intron | 30.0% | |
| ! | TAGTCATCTGAATTGTTTCT+GGG | + | chr1_1:56699117-56699136 | Msa0030370:intron | 30.0% |
| ATAGAAGGTTCAAAAGTCAA+GGG | - | chr1_1:56699157-56699176 | None:intergenic | 30.0% | |
| AATAGAAGGTTCAAAAGTCA+AGG | - | chr1_1:56699158-56699177 | None:intergenic | 30.0% | |
| AAAATCCTTGACATTAGTGT+TGG | - | chr1_1:56699626-56699645 | None:intergenic | 30.0% | |
| ! | ATGTCAAGGATTTTATGCAA+AGG | + | chr1_1:56699632-56699651 | Msa0030370:CDS | 30.0% |
| !! | ACCTTTTTGTGTTGATCAAA+GGG | - | chr1_1:56699789-56699808 | None:intergenic | 30.0% |
| !! | AACCTTTTTGTGTTGATCAA+AGG | - | chr1_1:56699790-56699809 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCACATTCGTCAA+TGG | - | chr1_1:56699964-56699983 | None:intergenic | 30.0% |
| GGAAAAAAATATTGGCAATG+AGG | + | chr1_1:56699975-56699994 | Msa0030370:CDS | 30.0% | |
| ! | TCAACACCTTTTATAGCAAA+AGG | + | chr1_1:56700006-56700025 | Msa0030370:CDS | 30.0% |
| ! | CAACACCTTTTATAGCAAAA+GGG | + | chr1_1:56700007-56700026 | Msa0030370:CDS | 30.0% |
| ! | AACACCTTTTATAGCAAAAG+GGG | + | chr1_1:56700008-56700027 | Msa0030370:CDS | 30.0% |
| AACTTCATGTATCACCATTA+AGG | + | chr1_1:56700031-56700050 | Msa0030370:CDS | 30.0% | |
| !!! | CTGCTTCTATATTTGTTTTG+TGG | - | chr1_1:56700126-56700145 | None:intergenic | 30.0% |
| TTTACCTGTAAAGGATGAAG+AGG | - | chr1_1:56696918-56696937 | None:intergenic | 35.0% | |
| ! | GTGTGTTTCTATACTTTCCT+CGG | + | chr1_1:56697068-56697087 | Msa0030370:CDS | 35.0% |
| TTAGTGTTATCTCAGCAGTT+CGG | - | chr1_1:56697109-56697128 | None:intergenic | 35.0% | |
| ! | AACCTCCATATTTTCCTTCA+TGG | + | chr1_1:56697127-56697146 | Msa0030370:CDS | 35.0% |
| TACCATGAAGGAAAATATGG+AGG | - | chr1_1:56697132-56697151 | None:intergenic | 35.0% | |
| AAACACAGTGTACCTTTGAT+CGG | - | chr1_1:56697327-56697346 | None:intergenic | 35.0% | |
| CACTGGATTGTACTTTGAAT+TGG | - | chr1_1:56697383-56697402 | None:intergenic | 35.0% | |
| !! | CAATTTAGGTAACGGAAATG+AGG | + | chr1_1:56697416-56697435 | Msa0030370:intron | 35.0% |
| !! | ATTTAGGTAACGGAAATGAG+GGG | + | chr1_1:56697418-56697437 | Msa0030370:intron | 35.0% |
| ! | TCCCAAAATATATGTCGCTT+TGG | - | chr1_1:56697612-56697631 | None:intergenic | 35.0% |
| !! | AAGCGACATATATTTTGGGA+CGG | + | chr1_1:56697612-56697631 | Msa0030370:intron | 35.0% |
| !! | AGTTGTTATGCTGGTTTAGA+GGG | - | chr1_1:56697681-56697700 | None:intergenic | 35.0% |
| !! | AAGTTGTTATGCTGGTTTAG+AGG | - | chr1_1:56697682-56697701 | None:intergenic | 35.0% |
| ! | AGCATCTTAAGTTGTTATGC+TGG | - | chr1_1:56697690-56697709 | None:intergenic | 35.0% |
| ! | GAAACTGAAAACAGTTGATG+CGG | - | chr1_1:56697726-56697745 | None:intergenic | 35.0% |
| TATACTATCAAGCACACACT+CGG | - | chr1_1:56698137-56698156 | None:intergenic | 35.0% | |
| !! | GTTTTTGTTTGTGAGGTGTA+CGG | + | chr1_1:56698202-56698221 | Msa0030370:CDS | 35.0% |
| ! | CTTAGGAATTGCATTCCTTT+TGG | - | chr1_1:56698276-56698295 | None:intergenic | 35.0% |
| GCAATTCCTAAGCTTAACTA+TGG | + | chr1_1:56698284-56698303 | Msa0030370:CDS | 35.0% | |
| ! | TTGCACACTTTGTGATTTTG+AGG | + | chr1_1:56698502-56698521 | Msa0030370:CDS | 35.0% |
| ! | ATCTGTTACTGTTAGGCTTT+TGG | + | chr1_1:56698710-56698729 | Msa0030370:intron | 35.0% |
| CAGTGGTTGAATAACTGTAT+TGG | + | chr1_1:56698794-56698813 | Msa0030370:intron | 35.0% | |
| ! | GATGATTTTCGTCCTGTTAA+TGG | + | chr1_1:56698847-56698866 | Msa0030370:CDS | 35.0% |
| CTGCAATTGCGATATTTATC+AGG | + | chr1_1:56699003-56699022 | Msa0030370:CDS | 35.0% | |
| GATATTTATCAGGTGCTTTG+TGG | + | chr1_1:56699013-56699032 | Msa0030370:CDS | 35.0% | |
| GAATAGAAAAGGAGCTTCAT+AGG | + | chr1_1:56699045-56699064 | Msa0030370:CDS | 35.0% | |
| ! | CTTTTTGTAGAGTTTCCAAG+AGG | + | chr1_1:56699071-56699090 | Msa0030370:CDS | 35.0% |
| GATGACTATTACACATATGG+TGG | - | chr1_1:56699105-56699124 | None:intergenic | 35.0% | |
| AGAGAACTACCTTTCGTATT+AGG | - | chr1_1:56699293-56699312 | None:intergenic | 35.0% | |
| AGAACTGCACAGAAAATCAA+AGG | - | chr1_1:56699441-56699460 | None:intergenic | 35.0% | |
| TTTGTTTCATAAAGGGGATG+AGG | + | chr1_1:56699486-56699505 | Msa0030370:intron | 35.0% | |
| CATTGCCAGAATATAGTCAT+AGG | - | chr1_1:56699513-56699532 | None:intergenic | 35.0% | |
| ATCAAATGACTCCAATTCCA+TGG | - | chr1_1:56699552-56699571 | None:intergenic | 35.0% | |
| AAAAGCCAACACTAATGTCA+AGG | + | chr1_1:56699618-56699637 | Msa0030370:CDS | 35.0% | |
| ! | AAGGATTTTATGCAAAGGAC+AGG | + | chr1_1:56699637-56699656 | Msa0030370:CDS | 35.0% |
| ! | TAAGGTTTGAGACAGAATGA+AGG | - | chr1_1:56699693-56699712 | None:intergenic | 35.0% |
| TCAAAACAAGCTTCTCTGTA+AGG | - | chr1_1:56699711-56699730 | None:intergenic | 35.0% | |
| TCAATCTTGATAGACAACCT+AGG | - | chr1_1:56699748-56699767 | None:intergenic | 35.0% | |
| !! | CCTTTTTGTGTTGATCAAAG+GGG | - | chr1_1:56699788-56699807 | None:intergenic | 35.0% |
| TCAACTTTACGAGTTTCCAA+GGG | - | chr1_1:56699828-56699847 | None:intergenic | 35.0% | |
| TTCATTAAGACCTCTTCCAT+TGG | + | chr1_1:56699924-56699943 | Msa0030370:CDS | 35.0% | |
| AATATTGGCAATGAGGGATT+TGG | + | chr1_1:56699982-56700001 | Msa0030370:CDS | 35.0% | |
| ATATTGGCAATGAGGGATTT+GGG | + | chr1_1:56699983-56700002 | Msa0030370:CDS | 35.0% | |
| !! | AGTTCCCCTTTTGCTATAAA+AGG | - | chr1_1:56700015-56700034 | None:intergenic | 35.0% |
| !!! | AGTTTTGACTTGAAGTTAGC+AGG | + | chr1_1:56700144-56700163 | Msa0030370:CDS | 35.0% |
| AGCTTGAAACACATATTTCC+AGG | + | chr1_1:56700178-56700197 | Msa0030370:CDS | 35.0% | |
| TGTTCAGTTATCAGCAAAGA+TGG | + | chr1_1:56700210-56700229 | Msa0030370:CDS | 35.0% | |
| AATACAATGCCTACGATCTT+GGG | - | chr1_1:56700248-56700267 | None:intergenic | 35.0% | |
| AAATACAATGCCTACGATCT+TGG | - | chr1_1:56700249-56700268 | None:intergenic | 35.0% | |
| ATAGGATAATTCCAGCCAAA+TGG | + | chr1_1:56700406-56700425 | Msa0030370:three_prime_UTR | 35.0% | |
| CTGAAAATTACAGGTCCATT+TGG | - | chr1_1:56700424-56700443 | None:intergenic | 35.0% | |
| ! | AATGGACCTGTAATTTTCAG+AGG | + | chr1_1:56700424-56700443 | Msa0030370:three_prime_UTR | 35.0% |
| AATGTGACAGTTTGTAGGCA+TGG | + | chr1_1:56697025-56697044 | Msa0030370:intron | 40.0% | |
| ATGTGACAGTTTGTAGGCAT+GGG | + | chr1_1:56697026-56697045 | Msa0030370:intron | 40.0% | |
| CATGGGGATTTATAGTTTCC+TGG | + | chr1_1:56697043-56697062 | Msa0030370:CDS | 40.0% | |
| AAGTATAGAAACACACCACC+AGG | - | chr1_1:56697064-56697083 | None:intergenic | 40.0% | |
| ATCTGTGCTAAACCGATCAA+AGG | + | chr1_1:56697312-56697331 | Msa0030370:intron | 40.0% | |
| ! | GATCAAAGGTACACTGTGTT+TGG | + | chr1_1:56697326-56697345 | Msa0030370:intron | 40.0% |
| !! | TTTAGGTAACGGAAATGAGG+GGG | + | chr1_1:56697419-56697438 | Msa0030370:intron | 40.0% |
| !! | AAAGGAGCATTTCTGAGATG+GGG | - | chr1_1:56697486-56697505 | None:intergenic | 40.0% |
| !! | GAAAGGAGCATTTCTGAGAT+GGG | - | chr1_1:56697487-56697506 | None:intergenic | 40.0% |
| ATGTTACAGCACCAATAGCA+GGG | - | chr1_1:56697509-56697528 | None:intergenic | 40.0% | |
| AATGTTACAGCACCAATAGC+AGG | - | chr1_1:56697510-56697529 | None:intergenic | 40.0% | |
| !!! | GACATATATTTTGGGACGGA+GGG | + | chr1_1:56697616-56697635 | Msa0030370:intron | 40.0% |
| !! | GTTGTTATGCTGGTTTAGAG+GGG | - | chr1_1:56697680-56697699 | None:intergenic | 40.0% |
| !! | TTGAAACTGGTTCTGTCTGT+AGG | - | chr1_1:56698236-56698255 | None:intergenic | 40.0% |
| TTATTGGTCAGATTGTGGTG+AGG | + | chr1_1:56698312-56698331 | Msa0030370:CDS | 40.0% | |
| ! | AGATTGTGGTGAGGTTTTTC+AGG | + | chr1_1:56698321-56698340 | Msa0030370:CDS | 40.0% |
| ACAAATGGAAATGGGAGAAG+AGG | - | chr1_1:56698425-56698444 | None:intergenic | 40.0% | |
| !! | TGTCGTCCTCTTTAAGATCA+GGG | - | chr1_1:56698475-56698494 | None:intergenic | 40.0% |
| !! | ATGTCGTCCTCTTTAAGATC+AGG | - | chr1_1:56698476-56698495 | None:intergenic | 40.0% |
| ACTTGTAATCGTTGCGTTGA+AGG | + | chr1_1:56698662-56698681 | Msa0030370:CDS | 40.0% | |
| CTTGTAATCGTTGCGTTGAA+GGG | + | chr1_1:56698663-56698682 | Msa0030370:CDS | 40.0% | |
| GGTCAGTATCTGTTACTGTT+AGG | + | chr1_1:56698703-56698722 | Msa0030370:intron | 40.0% | |
| !! | ACATGGTGTTGGAAACGTTT+TGG | - | chr1_1:56698951-56698970 | None:intergenic | 40.0% |
| GTTCACATAACACATGGTGT+TGG | - | chr1_1:56698962-56698981 | None:intergenic | 40.0% | |
| TGAGCTGTTCACATAACACA+TGG | - | chr1_1:56698968-56698987 | None:intergenic | 40.0% | |
| TGTGAACAGCTCATCATTGA+AGG | + | chr1_1:56698975-56698994 | Msa0030370:intron | 40.0% | |
| AACAGCTCATCATTGAAGGA+GGG | + | chr1_1:56698979-56698998 | Msa0030370:intron | 40.0% | |
| GGATAAGAGGGGAATAGAAA+AGG | + | chr1_1:56699034-56699053 | Msa0030370:CDS | 40.0% | |
| TGAACTTCATGAAATGCTGC+AGG | + | chr1_1:56699200-56699219 | Msa0030370:intron | 40.0% | |
| AGCTTATAGTTCAGCTGCAT+TGG | + | chr1_1:56699242-56699261 | Msa0030370:CDS | 40.0% | |
| GCTTATAGTTCAGCTGCATT+GGG | + | chr1_1:56699243-56699262 | Msa0030370:CDS | 40.0% | |
| CTTATAGTTCAGCTGCATTG+GGG | + | chr1_1:56699244-56699263 | Msa0030370:CDS | 40.0% | |
| TCACGTTCTCCTAATACGAA+AGG | + | chr1_1:56699281-56699300 | Msa0030370:CDS | 40.0% | |
| GGTAGTTCTCTTTCTTGCTT+TGG | + | chr1_1:56699302-56699321 | Msa0030370:intron | 40.0% | |
| GAGGACCTATGACTATATTC+TGG | + | chr1_1:56699505-56699524 | Msa0030370:CDS | 40.0% | |
| AGAGAATGAAGCCATGGAAT+TGG | + | chr1_1:56699538-56699557 | Msa0030370:CDS | 40.0% | |
| CAATGCTGTCATCTGATGAA+AGG | - | chr1_1:56699583-56699602 | None:intergenic | 40.0% | |
| !!! | GACATTAGTGTTGGCTTTTC+AGG | - | chr1_1:56699617-56699636 | None:intergenic | 40.0% |
| ! | GACAGAATGAAGGCATAAAG+CGG | - | chr1_1:56699683-56699702 | None:intergenic | 40.0% |
| ! | TTTGTGTTGATCAAAGGGGA+AGG | - | chr1_1:56699784-56699803 | None:intergenic | 40.0% |
| CCCCTTTGATCAACACAAAA+AGG | + | chr1_1:56699785-56699804 | Msa0030370:CDS | 40.0% | |
| TTCACGTAAGCATTAACCCT+TGG | + | chr1_1:56699809-56699828 | Msa0030370:CDS | 40.0% | |
| GTCAACTTTACGAGTTTCCA+AGG | - | chr1_1:56699829-56699848 | None:intergenic | 40.0% | |
| !! | TGCAAGTAGAGCTTTTTCTC+TGG | - | chr1_1:56699851-56699870 | None:intergenic | 40.0% |
| CTTGGACTTGAAAGCCTTAA+TGG | - | chr1_1:56700048-56700067 | None:intergenic | 40.0% | |
| CCTGCAGAAAATCTTCTTCT+TGG | - | chr1_1:56700066-56700085 | None:intergenic | 40.0% | |
| ! | CCAAGAAGAAGATTTTCTGC+AGG | + | chr1_1:56700063-56700082 | Msa0030370:CDS | 40.0% |
| TGAAACACATATTTCCAGGC+AGG | + | chr1_1:56700182-56700201 | Msa0030370:CDS | 40.0% | |
| ATACAATGCCTACGATCTTG+GGG | - | chr1_1:56700247-56700266 | None:intergenic | 40.0% | |
| AAATTACAGGTCCATTTGGC+TGG | - | chr1_1:56700420-56700439 | None:intergenic | 40.0% | |
| ! | GCATTGCCTCTGAAAATTAC+AGG | - | chr1_1:56700433-56700452 | None:intergenic | 40.0% |
| GCTCTTTCTCGTCAACTCAA+CGG | - | chr1_1:56696819-56696838 | None:intergenic | 45.0% | |
| ATACACACTATGAGACGCCA+TGG | + | chr1_1:56696882-56696901 | Msa0030370:exon | 45.0% | |
| ACGTCCTCTTCATCCTTTAC+AGG | + | chr1_1:56696911-56696930 | Msa0030370:CDS | 45.0% | |
| TGTGACAGTTTGTAGGCATG+GGG | + | chr1_1:56697027-56697046 | Msa0030370:intron | 45.0% | |
| GGGGATTTATAGTTTCCTGG+TGG | + | chr1_1:56697046-56697065 | Msa0030370:CDS | 45.0% | |
| !! | AAGGAGCATTTCTGAGATGG+GGG | - | chr1_1:56697485-56697504 | None:intergenic | 45.0% |
| !! | GGAAAGGAGCATTTCTGAGA+TGG | - | chr1_1:56697488-56697507 | None:intergenic | 45.0% |
| AATGCTCCTTTCCCTGCTAT+TGG | + | chr1_1:56697495-56697514 | Msa0030370:intron | 45.0% | |
| !!! | CGACATATATTTTGGGACGG+AGG | + | chr1_1:56697615-56697634 | Msa0030370:intron | 45.0% |
| ! | ACTGAAAACAGTTGATGCGG+TGG | - | chr1_1:56697723-56697742 | None:intergenic | 45.0% |
| !!! | TTGTGGTGAGGTTTTTCAGG+AGG | + | chr1_1:56698324-56698343 | Msa0030370:CDS | 45.0% |
| !!! | TGTGGTGAGGTTTTTCAGGA+GGG | + | chr1_1:56698325-56698344 | Msa0030370:CDS | 45.0% |
| GGGTGGAAAAGAAGTTGCTT+AGG | + | chr1_1:56698345-56698364 | Msa0030370:CDS | 45.0% | |
| ACTTGTGCACTCGTCTTCAA+CGG | - | chr1_1:56698398-56698417 | None:intergenic | 45.0% | |
| TGTCGTCCCTGATCTTAAAG+AGG | + | chr1_1:56698466-56698485 | Msa0030370:CDS | 45.0% | |
| AAGGGTTTGATCACCATTGC+AGG | + | chr1_1:56698681-56698700 | Msa0030370:CDS | 45.0% | |
| AGGGTTTGATCACCATTGCA+GGG | + | chr1_1:56698682-56698701 | Msa0030370:CDS | 45.0% | |
| AACAGATACTGACCCTGCAA+TGG | - | chr1_1:56698697-56698716 | None:intergenic | 45.0% | |
| GAACAGCTCATCATTGAAGG+AGG | + | chr1_1:56698978-56698997 | Msa0030370:intron | 45.0% | |
| TCAGGTGCTTTGTGGATAAG+AGG | + | chr1_1:56699021-56699040 | Msa0030370:CDS | 45.0% | |
| CAGGTGCTTTGTGGATAAGA+GGG | + | chr1_1:56699022-56699041 | Msa0030370:CDS | 45.0% | |
| AGGTGCTTTGTGGATAAGAG+GGG | + | chr1_1:56699023-56699042 | Msa0030370:CDS | 45.0% | |
| ! | AATCAAAGGCTGGAGCACTT+TGG | - | chr1_1:56699427-56699446 | None:intergenic | 45.0% |
| CTGCACAGAAAATCAAAGGC+TGG | - | chr1_1:56699437-56699456 | None:intergenic | 45.0% | |
| GAGAGAAGAGAATGAAGCCA+TGG | + | chr1_1:56699532-56699551 | Msa0030370:CDS | 45.0% | |
| ! | TGAGTTTTCAGAGCTCACCT+AGG | + | chr1_1:56699728-56699747 | Msa0030370:intron | 45.0% |
| TACTTGCAGCTGAGAAAGCA+AGG | + | chr1_1:56699863-56699882 | Msa0030370:CDS | 45.0% | |
| ACTTGCAGCTGAGAAAGCAA+GGG | + | chr1_1:56699864-56699883 | Msa0030370:CDS | 45.0% | |
| AATGAACTGTGCTCCCTCAT+TGG | - | chr1_1:56699910-56699929 | None:intergenic | 45.0% | |
| ! | CGTTTTGTCTCCAATGGAAG+AGG | - | chr1_1:56699937-56699956 | None:intergenic | 45.0% |
| CTTCCATTGGAGACAAAACG+CGG | + | chr1_1:56699937-56699956 | Msa0030370:CDS | 45.0% | |
| ! | ATTTTCTGCAGGCACACCAT+CGG | + | chr1_1:56700074-56700093 | Msa0030370:CDS | 45.0% |
| ATGCTGCTAGAGAATACCGA+TGG | - | chr1_1:56700093-56700112 | None:intergenic | 45.0% | |
| TGAAGTTAGCAGGTGTGTCT+AGG | + | chr1_1:56700154-56700173 | Msa0030370:CDS | 45.0% | |
| GAAGTTAGCAGGTGTGTCTA+GGG | + | chr1_1:56700155-56700174 | Msa0030370:CDS | 45.0% | |
| AACTGAACATAGAACCTGCC+TGG | - | chr1_1:56700199-56700218 | None:intergenic | 45.0% | |
| !!! | ATTATTATTTATTTTTGAAT+TGG | + | chr1_1:56697264-56697283 | Msa0030370:intron | 5.0% |
| !!! | ATTGATATTTTTTAATTTAA+GGG | + | chr1_1:56698013-56698032 | Msa0030370:intron | 5.0% |
| ACACTATGAGACGCCATGGT+TGG | + | chr1_1:56696886-56696905 | Msa0030370:exon | 50.0% | |
| ACTTTCCTCGGACTCTTCCT+CGG | + | chr1_1:56697080-56697099 | Msa0030370:CDS | 50.0% | |
| ACAGCACCAATAGCAGGGAA+AGG | - | chr1_1:56697504-56697523 | None:intergenic | 50.0% | |
| ! | GCTGGTTTAGAGGGGTTATC+TGG | - | chr1_1:56697672-56697691 | None:intergenic | 50.0% |
| ! | AACAGTTGATGCGGTGGCAT+TGG | - | chr1_1:56697717-56697736 | None:intergenic | 50.0% |
| CACTCGTCTTCAACGGATCA+AGG | - | chr1_1:56698391-56698410 | None:intergenic | 50.0% | |
| GTTGAAGACGAGTGCACAAG+TGG | + | chr1_1:56698397-56698416 | Msa0030370:CDS | 50.0% | |
| ATGGTGGCAAGAAGTCCTCT+TGG | - | chr1_1:56699089-56699108 | None:intergenic | 50.0% | |
| CAGCTGAGAAAGCAAGGGAA+AGG | + | chr1_1:56699869-56699888 | Msa0030370:CDS | 50.0% | |
| TCGTGCGAGAAAGACCAATG+AGG | + | chr1_1:56699893-56699912 | Msa0030370:CDS | 50.0% | |
| CGTGCGAGAAAGACCAATGA+GGG | + | chr1_1:56699894-56699913 | Msa0030370:CDS | 50.0% | |
| TGAACCATCCCCAAGATCGT+AGG | + | chr1_1:56700236-56700255 | Msa0030370:CDS | 50.0% | |
| AATGCCTACGATCTTGGGGA+TGG | - | chr1_1:56700243-56700262 | None:intergenic | 50.0% | |
| GAAGAGGACGTTGCCAACCA+TGG | - | chr1_1:56696902-56696921 | None:intergenic | 55.0% | |
| TCTCAGCAGTTCGGTTTCCG+AGG | - | chr1_1:56697100-56697119 | None:intergenic | 55.0% | |
| !! | AGCATTTCTGAGATGGGGGC+TGG | - | chr1_1:56697481-56697500 | None:intergenic | 55.0% |
| !!! | GGTGAGGTTTTTCAGGAGGG+TGG | + | chr1_1:56698328-56698347 | Msa0030370:CDS | 55.0% |
| ! | GGTCCGCGTTTTGTCTCCAA+TGG | - | chr1_1:56699943-56699962 | None:intergenic | 55.0% |
| ACGCGGACCATTGACGAATG+TGG | + | chr1_1:56699954-56699973 | Msa0030370:CDS | 55.0% | |
| GGTTTCCGAGGAAGAGTCCG+AGG | - | chr1_1:56697088-56697107 | None:intergenic | 60.0% | |
| !! | GGTAACGGAAATGAGGGGGC+TGG | + | chr1_1:56697423-56697442 | Msa0030370:intron | 60.0% |
| ! | GGGGCTGGTGCAATGTAGCT+CGG | + | chr1_1:56697438-56697457 | Msa0030370:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 56696772 | 56700496 | 56696772 | ID=Msa0030370;Name=Msa0030370 |
| chr1_1 | mRNA | 56696772 | 56700496 | 56696772 | ID=Msa0030370-mRNA-1;Parent=Msa0030370;Name=Msa0030370-mRNA-1;_AED=0.14;_eAED=0.14;_QI=119|1|1|1|1|1|9|239|506 |
| chr1_1 | exon | 56696772 | 56696932 | 56696772 | ID=Msa0030370-mRNA-1:exon:16969;Parent=Msa0030370-mRNA-1 |
| chr1_1 | exon | 56697035 | 56697148 | 56697035 | ID=Msa0030370-mRNA-1:exon:16970;Parent=Msa0030370-mRNA-1 |
| chr1_1 | exon | 56698188 | 56698523 | 56698188 | ID=Msa0030370-mRNA-1:exon:16971;Parent=Msa0030370-mRNA-1 |
| chr1_1 | exon | 56698635 | 56698703 | 56698635 | ID=Msa0030370-mRNA-1:exon:16972;Parent=Msa0030370-mRNA-1 |
| chr1_1 | exon | 56698797 | 56698868 | 56698797 | ID=Msa0030370-mRNA-1:exon:16973;Parent=Msa0030370-mRNA-1 |
| chr1_1 | exon | 56698984 | 56699112 | 56698984 | ID=Msa0030370-mRNA-1:exon:16974;Parent=Msa0030370-mRNA-1 |
| chr1_1 | exon | 56699222 | 56699302 | 56699222 | ID=Msa0030370-mRNA-1:exon:16975;Parent=Msa0030370-mRNA-1 |
| chr1_1 | exon | 56699500 | 56699658 | 56699500 | ID=Msa0030370-mRNA-1:exon:16976;Parent=Msa0030370-mRNA-1 |
| chr1_1 | exon | 56699739 | 56700496 | 56699739 | ID=Msa0030370-mRNA-1:exon:16977;Parent=Msa0030370-mRNA-1 |
| chr1_1 | five_prime_UTR | 56696772 | 56696890 | 56696772 | ID=Msa0030370-mRNA-1:five_prime_utr;Parent=Msa0030370-mRNA-1 |
| chr1_1 | CDS | 56696891 | 56696932 | 56696891 | ID=Msa0030370-mRNA-1:cds;Parent=Msa0030370-mRNA-1 |
| chr1_1 | CDS | 56697035 | 56697148 | 56697035 | ID=Msa0030370-mRNA-1:cds;Parent=Msa0030370-mRNA-1 |
| chr1_1 | CDS | 56698188 | 56698523 | 56698188 | ID=Msa0030370-mRNA-1:cds;Parent=Msa0030370-mRNA-1 |
| chr1_1 | CDS | 56698635 | 56698703 | 56698635 | ID=Msa0030370-mRNA-1:cds;Parent=Msa0030370-mRNA-1 |
| chr1_1 | CDS | 56698797 | 56698868 | 56698797 | ID=Msa0030370-mRNA-1:cds;Parent=Msa0030370-mRNA-1 |
| chr1_1 | CDS | 56698984 | 56699112 | 56698984 | ID=Msa0030370-mRNA-1:cds;Parent=Msa0030370-mRNA-1 |
| chr1_1 | CDS | 56699222 | 56699302 | 56699222 | ID=Msa0030370-mRNA-1:cds;Parent=Msa0030370-mRNA-1 |
| chr1_1 | CDS | 56699500 | 56699658 | 56699500 | ID=Msa0030370-mRNA-1:cds;Parent=Msa0030370-mRNA-1 |
| chr1_1 | CDS | 56699739 | 56700257 | 56699739 | ID=Msa0030370-mRNA-1:cds;Parent=Msa0030370-mRNA-1 |
| chr1_1 | three_prime_UTR | 56700258 | 56700496 | 56700258 | ID=Msa0030370-mRNA-1:three_prime_utr;Parent=Msa0030370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
