AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1307630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1307630 MtrunA17_Chr8g0370671 98.387 434 6 1 1 433 1 434 0.0 892
Msa1307630 MtrunA17_Chr5g0406741 73.086 431 103 5 6 431 6 428 0.0 638
Msa1307630 MtrunA17_Chr7g0255771 46.739 276 140 2 158 427 182 456 7.53e-84 265
Msa1307630 MtrunA17_Chr5g0441371 43.223 273 152 3 153 423 143 414 5.30e-75 240
Msa1307630 MtrunA17_Chr8g0357001 47.032 219 116 0 165 383 476 694 1.09e-59 207
Msa1307630 MtrunA17_Chr1g0148681 39.209 278 155 6 155 422 137 410 2.57e-57 194
Msa1307630 MtrunA17_Chr3g0138431 39.608 255 147 3 175 422 213 467 4.11e-55 190
Msa1307630 MtrunA17_Chr3g0125051 35.789 285 171 6 148 423 216 497 2.54e-53 186
Msa1307630 MtrunA17_Chr3g0125041 38.430 242 132 6 196 423 264 502 3.09e-51 180
Msa1307630 MtrunA17_Chr2g0332181 38.057 247 146 3 175 414 167 413 1.65e-48 171
Msa1307630 MtrunA17_Chr1g0152871 35.433 254 154 4 175 418 91 344 4.25e-48 168
Msa1307630 MtrunA17_Chr2g0332171 40.343 233 131 4 158 383 205 436 1.08e-47 170
Msa1307630 MtrunA17_Chr3g0134401 34.661 251 157 3 175 418 74 324 6.60e-46 162
Msa1307630 MtrunA17_Chr3g0134411 33.716 261 164 4 167 418 83 343 1.43e-44 159
Msa1307630 MtrunA17_Chr3g0134421 30.678 339 207 8 98 418 8 336 3.51e-42 152
Msa1307630 MtrunA17_Chr3g0102851 39.623 212 121 3 207 411 60 271 1.17e-39 144
Msa1307630 MtrunA17_Chr3g0134441 35.270 241 137 5 176 402 65 300 4.26e-39 143
Msa1307630 MtrunA17_Chr3g0103471 37.089 213 127 3 206 411 49 261 6.72e-37 136
Msa1307630 MtrunA17_Chr3g0102861 38.318 214 123 5 206 411 49 261 5.77e-36 133
Msa1307630 MtrunA17_Chr3g0102621 37.788 217 126 5 203 411 52 267 1.01e-35 133
Msa1307630 MtrunA17_Chr6g0462981 37.391 230 124 7 203 425 70 286 1.73e-34 130
Msa1307630 MtrunA17_Chr6g0462911 35.747 221 126 5 208 424 75 283 6.06e-33 126
Msa1307630 MtrunA17_Chr3g0102631 37.500 208 116 5 225 424 1 202 8.35e-32 120
Msa1307630 MtrunA17_Chr3g0102651 37.500 208 116 5 225 424 1 202 8.35e-32 120
Msa1307630 MtrunA17_Chr3g0102661 37.500 208 116 5 225 424 1 202 8.35e-32 120
Msa1307630 MtrunA17_Chr3g0102671 37.500 208 116 5 225 424 1 202 8.35e-32 120
Msa1307630 MtrunA17_Chr3g0134431 32.195 205 120 3 207 409 44 231 1.17e-29 116
Msa1307630 MtrunA17_Chr5g0398791 34.104 173 107 3 173 340 1 171 1.11e-22 94.4
Msa1307630 MtrunA17_Chr5g0418901 46.914 81 43 0 229 309 7 87 1.15e-20 86.3
Msa1307630 MtrunA17_Chr1g0161581 33.553 152 91 2 208 358 372 514 6.10e-15 76.6
Msa1307630 MtrunA17_Chr5g0401271 28.395 162 104 5 204 358 101 257 3.54e-14 73.6
Msa1307630 MtrunA17_Chr2g0277271 38.667 75 46 0 194 268 15 89 3.08e-12 62.4
Msa1307630 MtrunA17_Chr3g0134781 31.092 119 79 1 202 317 61 179 4.43e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1307630 AT1G20610.1 56.177 429 179 6 5 427 4 429 1.64e-167 477
Msa1307630 AT1G76310.1 56.552 435 169 9 5 427 4 430 1.27e-164 470
Msa1307630 AT1G76310.3 53.132 463 169 10 5 427 4 458 5.13e-158 454
Msa1307630 AT2G17620.1 59.259 405 149 7 29 427 29 423 4.80e-156 448
Msa1307630 AT4G35620.1 57.014 442 162 10 1 429 1 427 2.33e-150 434
Msa1307630 AT1G76310.2 55.357 392 155 9 5 384 4 387 1.36e-140 407
Msa1307630 AT4G35620.2 56.818 396 144 9 1 384 1 381 1.69e-131 384
Msa1307630 AT1G76310.4 54.955 333 130 9 5 325 4 328 2.50e-110 328
Msa1307630 AT3G11520.1 40.054 367 203 4 78 429 48 412 7.35e-85 266
Msa1307630 AT1G20590.1 68.023 172 55 0 233 404 63 234 3.18e-84 259
Msa1307630 AT5G06150.1 37.076 383 202 5 78 427 57 433 1.71e-83 263
Msa1307630 AT2G26760.1 45.525 257 137 3 156 410 111 366 1.70e-77 246
Msa1307630 AT4G37490.1 45.070 284 149 4 150 427 140 422 2.29e-77 247
Msa1307630 AT1G16330.1 43.728 279 155 1 144 422 366 642 2.27e-73 242
Msa1307630 AT3G11520.2 39.634 328 181 4 78 390 48 373 2.45e-73 235
Msa1307630 AT5G25380.3 31.894 417 255 12 21 418 17 423 1.83e-57 195
Msa1307630 AT5G25380.1 31.894 417 255 12 21 418 17 423 1.83e-57 195
Msa1307630 AT5G25380.4 32.143 420 256 13 21 418 17 429 4.52e-57 194
Msa1307630 AT1G77390.1 39.033 269 156 4 158 419 162 429 6.31e-57 194
Msa1307630 AT5G25380.2 31.796 412 252 12 21 413 17 418 1.61e-56 192
Msa1307630 AT1G47210.2 37.671 292 170 6 136 418 66 354 4.33e-55 187
Msa1307630 AT5G11300.1 43.363 226 122 2 200 419 198 423 7.87e-55 188
Msa1307630 AT5G43080.2 37.805 246 151 2 175 418 87 332 1.19e-54 185
Msa1307630 AT1G44110.1 37.410 278 166 4 149 419 169 445 2.16e-54 187
Msa1307630 AT5G06150.2 48.571 175 87 2 158 332 165 336 9.26e-54 182
Msa1307630 AT5G43080.1 37.052 251 151 3 175 418 87 337 1.66e-52 180
Msa1307630 AT1G15570.1 38.433 268 157 4 158 418 172 438 9.32e-52 181
Msa1307630 AT1G80370.1 38.060 268 158 4 158 418 181 447 2.51e-50 177
Msa1307630 AT1G47230.1 37.255 255 147 5 175 418 95 347 3.41e-50 174
Msa1307630 AT1G47220.1 35.548 301 173 7 138 418 9 308 9.38e-50 172
Msa1307630 AT5G11300.2 48.045 179 87 2 200 372 198 376 1.05e-48 171
Msa1307630 AT1G47230.2 37.109 256 147 6 175 418 95 348 2.14e-48 169
Msa1307630 AT1G34460.2 32.450 302 142 9 35 322 142 395 2.23e-37 142
Msa1307630 AT1G34460.4 32.450 302 142 9 35 322 142 395 2.23e-37 142
Msa1307630 AT1G34460.9 32.131 305 142 9 35 322 128 384 6.60e-37 141
Msa1307630 AT1G34460.7 32.131 305 142 9 35 322 142 398 7.26e-37 141
Msa1307630 AT1G34460.6 32.131 305 142 9 35 322 142 398 7.61e-37 141
Msa1307630 AT1G34460.3 32.131 305 142 9 35 322 142 398 7.61e-37 141
Msa1307630 AT1G34460.8 32.131 305 142 9 35 322 142 398 7.61e-37 141
Msa1307630 AT1G34460.1 32.131 305 142 9 35 322 142 398 7.61e-37 141
Msa1307630 AT1G34460.5 32.131 305 142 9 35 322 142 398 9.60e-37 140
Msa1307630 AT1G14750.1 31.381 239 156 5 151 386 335 568 1.59e-20 94.4
Msa1307630 AT1G14750.3 31.381 239 156 5 151 386 335 568 2.04e-20 94.4
Msa1307630 AT1G14750.2 31.381 239 156 5 151 386 167 400 2.85e-20 92.8
Msa1307630 AT1G14750.4 31.381 239 155 6 151 386 167 399 3.81e-19 89.4
Msa1307630 AT1G47210.1 37.692 130 75 4 136 262 66 192 2.40e-17 80.5

Find 113 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATACGTGTGCTGCTTATTT+TGG 0.124019 8_4:+3494340 Msa1307630:three_prime_UTR
TGGATTCTTGGGTTGAATCT+TGG 0.236158 8_4:+3490586 Msa1307630:five_prime_UTR
CCATTGAATTCGAATGAGTT+TGG 0.261009 8_4:+3491920 Msa1307630:CDS
TATAGAGGGAGAGATGATTT+TGG 0.262359 8_4:+3492154 Msa1307630:CDS
CAACTTTGGTTGCTTGTTCT+AGG 0.265318 8_4:+3494393 Msa1307630:three_prime_UTR
GGATTCTTGGGTTGAATCTT+GGG 0.294348 8_4:+3490587 Msa1307630:five_prime_UTR
TATGTCTTTGAACAAAATAA+TGG 0.304430 8_4:+3494527 Msa1307630:three_prime_UTR
GGGCAGAACAGAAGAGCTTT+AGG 0.305806 8_4:+3490905 Msa1307630:CDS
TGAAAAGAAACAGGCTGATC+TGG 0.314414 8_4:+3491146 Msa1307630:CDS
ATAGGCTCTGGTTGGTCTTC+TGG 0.320848 8_4:-3491977 None:intergenic
TAATCTCATAGACAGATTCT+TGG 0.324335 8_4:+3493263 Msa1307630:CDS
TGTAAGCTCTGTCAGCTATA+TGG 0.334048 8_4:-3493392 None:intergenic
TGGTCTTGTTGCCATGCTTT+TGG 0.336057 8_4:+3493323 Msa1307630:CDS
GGTTGAGATGGAGGATATAG+AGG 0.350208 8_4:+3492139 Msa1307630:CDS
AAATAAGCAGCACACGTATA+TGG 0.354625 8_4:-3494337 None:intergenic
AGGTTTGCTGCACAAATTGC+TGG 0.354792 8_4:+3491759 Msa1307630:CDS
CCAAACTCATTCGAATTCAA+TGG 0.363201 8_4:-3491920 None:intergenic
ATGTCTTTGAACAAAATAAT+GGG 0.363772 8_4:+3494528 Msa1307630:three_prime_UTR
GTTATAACAGCATCAAATAA+AGG 0.367255 8_4:-3494580 None:intergenic
GGTTGCTTGTTCTAGGGAAA+TGG 0.368929 8_4:+3494400 Msa1307630:three_prime_UTR
CATTATCTTCTGCAGTATCT+TGG 0.371884 8_4:+3493024 Msa1307630:intron
AGTTTCTGTGCCTGTCGTTT+CGG 0.378515 8_4:+3493362 Msa1307630:CDS
TTTCTTGGTTGAGCTATCTC+TGG 0.388305 8_4:+3493787 Msa1307630:CDS
ATGCACTCCCGTCAGTTTCC+CGG 0.396721 8_4:-3494192 None:intergenic
ACGGGAGTGCATAGGAAGTA+TGG 0.400928 8_4:+3494203 Msa1307630:CDS
CCAACCAGAGCCTATGACTT+TGG 0.406687 8_4:+3491985 Msa1307630:CDS
GAAATTATTATGTTCACCTA+TGG 0.409336 8_4:-3494494 None:intergenic
TGAGATTTGTGAAAAGAAAC+AGG 0.423211 8_4:+3491137 Msa1307630:CDS
CATGGTGGTGGAAGAATTGT+TGG 0.432361 8_4:+3490884 Msa1307630:CDS
TGAAACATAAAGAGCAACTT+TGG 0.433750 8_4:+3494379 Msa1307630:three_prime_UTR
TCCCGTCAGTTTCCCGGCTC+CGG 0.437003 8_4:-3494186 None:intergenic
GCTGAAGTTTCCACCATCCT+TGG 0.437665 8_4:+3493823 Msa1307630:CDS
AAGAAGAAAACGAGAATAAC+GGG 0.438031 8_4:-3490481 None:intergenic
TTCCACCAGAAAGCCGGAGC+CGG 0.440451 8_4:+3494173 Msa1307630:CDS
TTAGGAAGAGGTTGAGATGG+AGG 0.445763 8_4:+3492130 Msa1307630:intron
GCTGGCTCTCTTCCTATGGC+TGG 0.454389 8_4:-3494289 None:intergenic
AAGGAAAGACATTCTCGAAA+TGG 0.454782 8_4:+3493416 Msa1307630:CDS
CATGGCTGGCTCTCTTCCTA+TGG 0.454970 8_4:-3494293 None:intergenic
TCCACCAGAAAGCCGGAGCC+GGG 0.455107 8_4:+3494174 Msa1307630:CDS
TCAGTATGCTCCAAAGTCAT+AGG 0.464004 8_4:-3491995 None:intergenic
CTGTGTTTCACCAACCTACA+TGG 0.464678 8_4:+3493047 Msa1307630:CDS
GAAGAAGAAAACGAGAATAA+CGG 0.477596 8_4:-3490482 None:intergenic
AACTTTGGTTGCTTGTTCTA+GGG 0.482023 8_4:+3494394 Msa1307630:three_prime_UTR
CTTGGTTGAGCTATCTCTGG+TGG 0.487275 8_4:+3493790 Msa1307630:CDS
TGCTCCAAAGTCATAGGCTC+TGG 0.489422 8_4:-3491989 None:intergenic
GTTATGCCAAGAAAATTTCA+AGG 0.494043 8_4:+3490702 Msa1307630:CDS
CATCATCCTCACCTTGTGAT+GGG 0.499765 8_4:-3491177 None:intergenic
TCCCGGCTCCGGCTTTCTGG+TGG 0.502002 8_4:-3494175 None:intergenic
AAACAATTCTCTTGCTGTTG+TGG 0.505256 8_4:+3492196 Msa1307630:CDS
TTGACCTCAATGAGAGGATG+AGG 0.506853 8_4:+3493079 Msa1307630:CDS
TAAAATAATACCATCTCAAG+TGG 0.513574 8_4:-3492034 None:intergenic
TAACTTGAGTTCATCATCAA+TGG 0.515623 8_4:-3491954 None:intergenic
GCCGGAGCCGGGAAACTGAC+GGG 0.526709 8_4:+3494185 Msa1307630:CDS
GCATCATCCTCACCTTGTGA+TGG 0.528830 8_4:-3491178 None:intergenic
AATCAAGTGGGTCATGGTGG+TGG 0.531920 8_4:+3490872 Msa1307630:CDS
GTTGAGATGGAGGATATAGA+GGG 0.532314 8_4:+3492140 Msa1307630:CDS
GAAAAGAAACAGGCTGATCT+GGG 0.542053 8_4:+3491147 Msa1307630:CDS
CAATCTTTCTGTAGTAAGCA+TGG 0.544092 8_4:-3492235 None:intergenic
AGCCGGAGCCGGGAAACTGA+CGG 0.546193 8_4:+3494184 Msa1307630:CDS
GTTGGATTCCACCAGAAAGC+CGG 0.549405 8_4:+3494167 Msa1307630:CDS
TTTGAAACAGCTTGAGCTGG+TGG 0.549805 8_4:+3493760 Msa1307630:intron
CTGTCAGAGGTTTCAAACAC+TGG 0.551030 8_4:+3493879 Msa1307630:CDS
CTCATGAAAACATAAGCAGT+TGG 0.552049 8_4:-3493618 None:intergenic
TTCTCCAGAAGAAAACATGC+TGG 0.555497 8_4:-3494260 None:intergenic
TGTGAGAAGCTATACATGGC+TGG 0.562076 8_4:-3494307 None:intergenic
TGTAAGAAAGAAACTTCAGC+TGG 0.563142 8_4:+3493299 Msa1307630:CDS
ACCCTTGTGTTGTACACAAG+AGG 0.563360 8_4:+3490963 Msa1307630:CDS
AGAAAGAAACTTCAGCTGGT+TGG 0.565294 8_4:+3493303 Msa1307630:CDS
TAGAGAGTGCTCTATGCTGA+TGG 0.570792 8_4:+3494145 Msa1307630:intron
TCAAGTGGATCACTATGCAT+TGG 0.570854 8_4:-3492019 None:intergenic
CCAAAGTCATAGGCTCTGGT+TGG 0.576471 8_4:-3491985 None:intergenic
ACTAGTTGACTGGCTGATTG+AGG 0.576580 8_4:+3493107 Msa1307630:CDS
AGTTGTTCATCCATGTAGGT+TGG 0.578213 8_4:-3493057 None:intergenic
GAGTGCTCTATGCTGATGGT+TGG 0.583871 8_4:+3494149 Msa1307630:CDS
TTTCATGAGAAGGTTTCTGA+AGG 0.585150 8_4:+3493632 Msa1307630:CDS
ACCCTCTTGTGTACAACACA+AGG 0.585319 8_4:-3490965 None:intergenic
GGAATGAATCAAGTGGGTCA+TGG 0.585969 8_4:+3490866 Msa1307630:CDS
TGCTTACTACAGAAAGATTG+AGG 0.587812 8_4:+3492238 Msa1307630:CDS
GCATAGTGATCCACTTGAGA+TGG 0.589041 8_4:+3492024 Msa1307630:CDS
GAGTTCATCATCAATGGCGA+TGG 0.589270 8_4:-3491948 None:intergenic
TTGTGTACAACACAAGGGTA+AGG 0.590139 8_4:-3490959 None:intergenic
GCAGCAGCAGCAACCAAGGA+TGG 0.592621 8_4:-3493836 None:intergenic
AAGAGAAACTACCTCAGCAT+AGG 0.594491 8_4:-3491793 None:intergenic
GGAAACTGACGGGAGTGCAT+AGG 0.596835 8_4:+3494195 Msa1307630:CDS
GACTGCAGCAGCAGCAACCA+AGG 0.597418 8_4:-3493840 None:intergenic
ATGGTGGTGGAAGAATTGTT+GGG 0.599493 8_4:+3490885 Msa1307630:CDS
TGAGGGCTATACTAGTTGAC+TGG 0.601446 8_4:+3493097 Msa1307630:CDS
CAGAACAGAAGAGCTTTAGG+AGG 0.603464 8_4:+3490908 Msa1307630:CDS
TGGATCAGATCCGAAACGAC+AGG 0.607714 8_4:-3493372 None:intergenic
GCAGCAGCAACCAAGGATGG+TGG 0.610277 8_4:-3493833 None:intergenic
ATAACAGCATCAAATAAAGG+TGG 0.611056 8_4:-3494577 None:intergenic
CCCTTGTGTTGTACACAAGA+GGG 0.611245 8_4:+3490964 Msa1307630:CDS
TAACAGCATCAAATAAAGGT+GGG 0.614591 8_4:-3494576 None:intergenic
TAGCCCTCATCCTCTCATTG+AGG 0.620243 8_4:-3493083 None:intergenic
TTTAGGAGGAATGAATCAAG+TGG 0.621092 8_4:+3490859 Msa1307630:intron
GTCAAGTTGTTCATCCATGT+AGG 0.623557 8_4:-3493061 None:intergenic
ATACTTGCATGCCAAAAGCA+TGG 0.626148 8_4:-3493334 None:intergenic
CTAGTGTCAGTGAATGCTAG+TGG 0.626231 8_4:+3490523 Msa1307630:five_prime_UTR
GGAGAACAAGAACCAGCCAT+AGG 0.628255 8_4:+3494277 Msa1307630:CDS
AACAACTTGACCTCAATGAG+AGG 0.630153 8_4:+3493073 Msa1307630:CDS
TGTTTGTGAGAAGCTATACA+TGG 0.636207 8_4:-3494311 None:intergenic
ACAGCTCAATGCACTGTCAG+AGG 0.636227 8_4:+3493866 Msa1307630:CDS
TTAGGAGGAATGAATCAAGT+GGG 0.649963 8_4:+3490860 Msa1307630:intron
TGACCTCAATGAGAGGATGA+GGG 0.651271 8_4:+3493080 Msa1307630:CDS
AGAACAGAAGAGCTTTAGGA+GGG 0.662736 8_4:+3490909 Msa1307630:CDS
GAAACAGTGTCTCTTGCATG+AGG 0.663445 8_4:-3493233 None:intergenic
CTCACAGCAATCCTATGCTG+AGG 0.663582 8_4:+3491782 Msa1307630:CDS
GGGAAAGAACAACAACAACA+TGG 0.670053 8_4:+3490647 Msa1307630:exon
ATGAATCAAGTGGGTCATGG+TGG 0.688882 8_4:+3490869 Msa1307630:CDS
TAGCTGACAGAGCTTACACA+AGG 0.713688 8_4:+3493397 Msa1307630:CDS
TGGGACATAGACCCATCACA+AGG 0.714635 8_4:+3491166 Msa1307630:CDS
CCCTCTTGTGTACAACACAA+GGG 0.715744 8_4:-3490964 None:intergenic
ACTGGAACAAGACATGCGAG+TGG 0.734063 8_4:+3493897 Msa1307630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATAATATTCAAAATTTTA+AGG + chr8_4:3490626-3490645 Msa1307630:five_prime_UTR 10.0%
!!! CATAATATTCAAAATTTTAA+GGG + chr8_4:3490627-3490646 Msa1307630:five_prime_UTR 10.0%
!! TTAAATTTAAAGATTTGAAT+TGG + chr8_4:3490807-3490826 Msa1307630:intron 10.0%
!! TAAATTTAAAGATTTGAATT+GGG + chr8_4:3490808-3490827 Msa1307630:intron 10.0%
!!! TTTTTTTATGATTATTAGTT+TGG + chr8_4:3491057-3491076 Msa1307630:intron 10.0%
!!! ACAAATTTTGATATTTATTA+TGG + chr8_4:3492539-3492558 Msa1307630:intron 10.0%
!!! GATTCAAAATTAGTTTTTTA+TGG + chr8_4:3490782-3490801 Msa1307630:intron 15.0%
!!! TTGAATCTTTTTTGAATTTT+AGG + chr8_4:3490842-3490861 Msa1307630:intron 15.0%
!!! AATTTTGAAATTTAATGTCA+TGG + chr8_4:3491258-3491277 Msa1307630:intron 15.0%
!! AAGAATTATGTAATCAAAAT+TGG + chr8_4:3491390-3491409 Msa1307630:intron 15.0%
!!! TGTTAAATTTTGAAATTGAA+TGG + chr8_4:3491413-3491432 Msa1307630:intron 15.0%
!!! TTTAAAATTCCAATATAATC+CGG - chr8_4:3492266-3492285 None:intergenic 15.0%
!!! CTAAAATCATATTTTTAAGT+TGG + chr8_4:3492879-3492898 Msa1307630:intron 15.0%
!!! AATTCTCTTTTTTTTTCTTC+TGG + chr8_4:3490559-3490578 Msa1307630:five_prime_UTR 20.0%
!!! ATTCTCTTTTTTTTTCTTCT+GGG + chr8_4:3490560-3490579 Msa1307630:five_prime_UTR 20.0%
!!! TACATTGTTGAAATTTTGAT+TGG + chr8_4:3490725-3490744 Msa1307630:intron 20.0%
!!! AAATTTTGATTGGAACATAA+AGG + chr8_4:3490735-3490754 Msa1307630:intron 20.0%
!!! AATCTTTTTTGAATTTTAGG+AGG + chr8_4:3490845-3490864 Msa1307630:intron 20.0%
!!! TTATTAGTTTGGTTTCTTTA+AGG + chr8_4:3491068-3491087 Msa1307630:intron 20.0%
!! TTATTGTCAAGTGAAATTAT+AGG + chr8_4:3491292-3491311 Msa1307630:intron 20.0%
!! TATTGTCAAGTGAAATTATA+GGG + chr8_4:3491293-3491312 Msa1307630:intron 20.0%
!! CATAATTTCATTCAACAATA+AGG - chr8_4:3491451-3491470 None:intergenic 20.0%
!! CTTATTGTTGAATGAAATTA+TGG + chr8_4:3491449-3491468 Msa1307630:intron 20.0%
!! ATTTCATTACATAAATCATG+GGG - chr8_4:3491697-3491716 None:intergenic 20.0%
!! CATTTCATTACATAAATCAT+GGG - chr8_4:3491698-3491717 None:intergenic 20.0%
!! TCATTTCATTACATAAATCA+TGG - chr8_4:3491699-3491718 None:intergenic 20.0%
!! ATGATTTATGTAATGAAATG+AGG + chr8_4:3491698-3491717 Msa1307630:intron 20.0%
!! ATGTTGATGTATTGTTAATT+AGG + chr8_4:3491736-3491755 Msa1307630:intron 20.0%
!! ATTAACTAAATTCTGAATCA+TGG + chr8_4:3491866-3491885 Msa1307630:intron 20.0%
!!! TGGAATTTTAAACTTCATAT+TGG + chr8_4:3492274-3492293 Msa1307630:intron 20.0%
!! ATGGAATTATTATTAAGCTT+AGG + chr8_4:3492621-3492640 Msa1307630:intron 20.0%
!!! TCATATTTTTAAGTTGGTTT+TGG + chr8_4:3492885-3492904 Msa1307630:intron 20.0%
!! CAAAGATATCAATAATTTGA+AGG - chr8_4:3493148-3493167 None:intergenic 20.0%
!!! TATCTTTGTCATTTAATAAC+CGG + chr8_4:3493160-3493179 Msa1307630:intron 20.0%
!! TGTGAAAAATTATTACAAGA+TGG - chr8_4:3493454-3493473 None:intergenic 20.0%
!!! GTTAAGTTACTTTTATTCTT+TGG + chr8_4:3494445-3494464 Msa1307630:three_prime_UTR 20.0%
!! TATGTCTTTGAACAAAATAA+TGG + chr8_4:3494527-3494546 Msa1307630:three_prime_UTR 20.0%
!! ATGTCTTTGAACAAAATAAT+GGG + chr8_4:3494528-3494547 Msa1307630:three_prime_UTR 20.0%
!! TTTTCTTCTTCTTCATATCT+TGG + chr8_4:3490494-3490513 Msa1307630:five_prime_UTR 25.0%
!!! TTTTTTTTTCTTCTGGGTTT+TGG + chr8_4:3490566-3490585 Msa1307630:five_prime_UTR 25.0%
!! AATGTACCTTGAAATTTTCT+TGG - chr8_4:3490711-3490730 None:intergenic 25.0%
!!! TTAAGGTTAATTGTTTTGTC+TGG + chr8_4:3491085-3491104 Msa1307630:intron 25.0%
!!! TGTTTTGTTTTTGTTGTTGT+TGG + chr8_4:3491209-3491228 Msa1307630:intron 25.0%
!!! GTTTTGTTTTTGTTGTTGTT+GGG + chr8_4:3491210-3491229 Msa1307630:intron 25.0%
! TCAATTTCAAACATGTAGAT+TGG + chr8_4:3491319-3491338 Msa1307630:intron 25.0%
!!! AATTTTGAAATTGAATGGCA+TGG + chr8_4:3491418-3491437 Msa1307630:intron 25.0%
!!! TGTTTTCTTTTGTTGTTGTT+AGG + chr8_4:3491531-3491550 Msa1307630:intron 25.0%
! TTGATGTATTGTTAATTAGG+AGG + chr8_4:3491739-3491758 Msa1307630:intron 25.0%
! TAAAATAATACCATCTCAAG+TGG - chr8_4:3492037-3492056 None:intergenic 25.0%
!! GCAATTTTATTGTAGATTTG+AGG + chr8_4:3492583-3492602 Msa1307630:intron 25.0%
! ATATCAATGATCTTACAAGT+TGG + chr8_4:3492665-3492684 Msa1307630:intron 25.0%
! AATATCTAACACTGTTATGT+TGG + chr8_4:3492773-3492792 Msa1307630:intron 25.0%
!! TTATACATTTTCACCTATCT+CGG - chr8_4:3492853-3492872 None:intergenic 25.0%
!!! AGTAAGATTTTTGATTCGAT+TGG - chr8_4:3492931-3492950 None:intergenic 25.0%
! ATTAGTTGCATTGAATTGAA+CGG - chr8_4:3493487-3493506 None:intergenic 25.0%
! ATTAGTCACATTGAATTGAA+CGG - chr8_4:3493529-3493548 None:intergenic 25.0%
! TATGACTAATGAAACTCATT+TGG - chr8_4:3493697-3493716 None:intergenic 25.0%
! AAAAAAGATAATCACATCAG+TGG - chr8_4:3494118-3494137 None:intergenic 25.0%
! GAAATTATTATGTTCACCTA+TGG - chr8_4:3494497-3494516 None:intergenic 25.0%
! GTTATAACAGCATCAAATAA+AGG - chr8_4:3494583-3494602 None:intergenic 25.0%
AAGAAGAAAACGAGAATAAC+GGG - chr8_4:3490484-3490503 None:intergenic 30.0%
GAAGAAGAAAACGAGAATAA+CGG - chr8_4:3490485-3490504 None:intergenic 30.0%
GTTATGCCAAGAAAATTTCA+AGG + chr8_4:3490702-3490721 Msa1307630:CDS 30.0%
TGATTGGAACATAAAGGAAA+AGG + chr8_4:3490741-3490760 Msa1307630:intron 30.0%
! ATCAATCAGAATTTTGTGCA+TGG + chr8_4:3490932-3490951 Msa1307630:CDS 30.0%
TGAGATTTGTGAAAAGAAAC+AGG + chr8_4:3491137-3491156 Msa1307630:CDS 30.0%
GGAAACATTTGATCGAAAAT+TGG + chr8_4:3491231-3491250 Msa1307630:intron 30.0%
CACTTGACAATAAAGTAACA+TGG - chr8_4:3491285-3491304 None:intergenic 30.0%
! TGGTGTTTTCAATTGTAGAT+TGG + chr8_4:3491469-3491488 Msa1307630:intron 30.0%
AAATTTAATGCCATAGACCA+TGG + chr8_4:3491586-3491605 Msa1307630:intron 30.0%
!!! TGTTGATTGATGCTGATTTT+TGG + chr8_4:3491653-3491672 Msa1307630:intron 30.0%
!!! GTTGATTGATGCTGATTTTT+GGG + chr8_4:3491654-3491673 Msa1307630:intron 30.0%
!!! TTGATTGATGCTGATTTTTG+GGG + chr8_4:3491655-3491674 Msa1307630:intron 30.0%
TAACTTGAGTTCATCATCAA+TGG - chr8_4:3491957-3491976 None:intergenic 30.0%
TCTTCCTAAAAAGTAGTACA+AGG - chr8_4:3492119-3492138 None:intergenic 30.0%
!!! TTGTACTACTTTTTAGGAAG+AGG + chr8_4:3492118-3492137 Msa1307630:intron 30.0%
TCACAAAACTAACTTCTATC+AGG - chr8_4:3492302-3492321 None:intergenic 30.0%
!!! CATTAGTCTGCTTTTTTGTA+TGG + chr8_4:3492351-3492370 Msa1307630:intron 30.0%
AACTTGCAAGTTGTAAAACT+TGG + chr8_4:3492499-3492518 Msa1307630:intron 30.0%
! GAGGTTGATTATCTTTACAA+TGG + chr8_4:3492602-3492621 Msa1307630:intron 30.0%
GATCATTGATATTCGAATCA+GGG - chr8_4:3492657-3492676 None:intergenic 30.0%
AGATCATTGATATTCGAATC+AGG - chr8_4:3492658-3492677 None:intergenic 30.0%
GAGATACAAGGAACAATAAA+TGG - chr8_4:3492806-3492825 None:intergenic 30.0%
GCAAGCATATATATTTAAGC+CGG - chr8_4:3493182-3493201 None:intergenic 30.0%
TAATCTCATAGACAGATTCT+TGG + chr8_4:3493263-3493282 Msa1307630:CDS 30.0%
TAATGGCTAATTGAAAAGAG+AGG - chr8_4:3493967-3493986 None:intergenic 30.0%
! TCTCTTTTCAATTAGCCATT+AGG + chr8_4:3493966-3493985 Msa1307630:intron 30.0%
! CTCTTTTCAATTAGCCATTA+GGG + chr8_4:3493967-3493986 Msa1307630:intron 30.0%
ATACTATAAGAATGCCCTAA+TGG - chr8_4:3493984-3494003 None:intergenic 30.0%
TGAAACATAAAGAGCAACTT+TGG + chr8_4:3494379-3494398 Msa1307630:three_prime_UTR 30.0%
!!! TTTTGTTGTTCATGTTCCAT+AGG + chr8_4:3494478-3494497 Msa1307630:three_prime_UTR 30.0%
TAACAGCATCAAATAAAGGT+GGG - chr8_4:3494579-3494598 None:intergenic 30.0%
ATAACAGCATCAAATAAAGG+TGG - chr8_4:3494580-3494599 None:intergenic 30.0%
TTTAGGAGGAATGAATCAAG+TGG + chr8_4:3490859-3490878 Msa1307630:intron 35.0%
TTAGGAGGAATGAATCAAGT+GGG + chr8_4:3490860-3490879 Msa1307630:intron 35.0%
TGAAATTGAATGGCATGGAA+TGG + chr8_4:3491423-3491442 Msa1307630:intron 35.0%
TTGTAGATTGGTGCAGATTA+AGG + chr8_4:3491481-3491500 Msa1307630:intron 35.0%
CATTTGACATTTCAGTACCA+TGG - chr8_4:3491606-3491625 None:intergenic 35.0%
CCAAACTCATTCGAATTCAA+TGG - chr8_4:3491923-3491942 None:intergenic 35.0%
CCATTGAATTCGAATGAGTT+TGG + chr8_4:3491920-3491939 Msa1307630:CDS 35.0%
!!! TTCGCCTTGTACTACTTTTT+AGG + chr8_4:3492112-3492131 Msa1307630:intron 35.0%
!! TTTTTAGGAAGAGGTTGAGA+TGG + chr8_4:3492127-3492146 Msa1307630:intron 35.0%
! TATAGAGGGAGAGATGATTT+TGG + chr8_4:3492154-3492173 Msa1307630:CDS 35.0%
!! AAACAATTCTCTTGCTGTTG+TGG + chr8_4:3492196-3492215 Msa1307630:CDS 35.0%
CAATCTTTCTGTAGTAAGCA+TGG - chr8_4:3492238-3492257 None:intergenic 35.0%
TGCTTACTACAGAAAGATTG+AGG + chr8_4:3492238-3492257 Msa1307630:CDS 35.0%
!! ATTGAGGTACCGGATTATAT+TGG + chr8_4:3492254-3492273 Msa1307630:intron 35.0%
AATTCAATCACTGTCAAGTG+TGG - chr8_4:3492441-3492460 None:intergenic 35.0%
ATTGATATTCGAATCAGGGT+TGG - chr8_4:3492653-3492672 None:intergenic 35.0%
GACGACATATATTGCAGATT+TGG - chr8_4:3492696-3492715 None:intergenic 35.0%
TGAACACTATCTATCAAGTG+TGG - chr8_4:3492748-3492767 None:intergenic 35.0%
GCAGTAAAGTATGAGATACA+AGG - chr8_4:3492818-3492837 None:intergenic 35.0%
CATTATCTTCTGCAGTATCT+TGG + chr8_4:3493024-3493043 Msa1307630:intron 35.0%
ATGCTTGCTTGATTGATATC+AGG + chr8_4:3493194-3493213 Msa1307630:intron 35.0%
TGTAAGAAAGAAACTTCAGC+TGG + chr8_4:3493299-3493318 Msa1307630:CDS 35.0%
AAGGAAAGACATTCTCGAAA+TGG + chr8_4:3493416-3493435 Msa1307630:CDS 35.0%
!!! AGATTTTTTCCAAACACCGT+AGG + chr8_4:3493554-3493573 Msa1307630:intron 35.0%
CTCATGAAAACATAAGCAGT+TGG - chr8_4:3493621-3493640 None:intergenic 35.0%
! CTGCTTATGTTTTCATGAGA+AGG + chr8_4:3493622-3493641 Msa1307630:CDS 35.0%
TTTCATGAGAAGGTTTCTGA+AGG + chr8_4:3493632-3493651 Msa1307630:CDS 35.0%
!!! TATTTTGAAACAGCTTGAGC+TGG + chr8_4:3493757-3493776 Msa1307630:intron 35.0%
GGGCATTCTTATAGTATAAG+TGG + chr8_4:3493987-3494006 Msa1307630:intron 35.0%
TTAAAGCTAGGGTCTACATA+TGG - chr8_4:3494091-3494110 None:intergenic 35.0%
TGTTTGTGAGAAGCTATACA+TGG - chr8_4:3494314-3494333 None:intergenic 35.0%
AAATAAGCAGCACACGTATA+TGG - chr8_4:3494340-3494359 None:intergenic 35.0%
!!! TATACGTGTGCTGCTTATTT+TGG + chr8_4:3494340-3494359 Msa1307630:three_prime_UTR 35.0%
!!! ATACGTGTGCTGCTTATTTT+GGG + chr8_4:3494341-3494360 Msa1307630:three_prime_UTR 35.0%
AACTTTGGTTGCTTGTTCTA+GGG + chr8_4:3494394-3494413 Msa1307630:three_prime_UTR 35.0%
!!! TCTTCTGGGTTTTGGATTCT+TGG + chr8_4:3490574-3490593 Msa1307630:five_prime_UTR 40.0%
!!! CTTCTGGGTTTTGGATTCTT+GGG + chr8_4:3490575-3490594 Msa1307630:five_prime_UTR 40.0%
!! TGGATTCTTGGGTTGAATCT+TGG + chr8_4:3490586-3490605 Msa1307630:five_prime_UTR 40.0%
!! GGATTCTTGGGTTGAATCTT+GGG + chr8_4:3490587-3490606 Msa1307630:five_prime_UTR 40.0%
GGGAAAGAACAACAACAACA+TGG + chr8_4:3490647-3490666 Msa1307630:exon 40.0%
! TTTTCTTGGCATAACTGCGT+TGG - chr8_4:3490697-3490716 None:intergenic 40.0%
!! ATGGTGGTGGAAGAATTGTT+GGG + chr8_4:3490885-3490904 Msa1307630:CDS 40.0%
!! AGAACAGAAGAGCTTTAGGA+GGG + chr8_4:3490909-3490928 Msa1307630:CDS 40.0%
TTGTGTACAACACAAGGGTA+AGG - chr8_4:3490962-3490981 None:intergenic 40.0%
TGAAAAGAAACAGGCTGATC+TGG + chr8_4:3491146-3491165 Msa1307630:CDS 40.0%
GAAAAGAAACAGGCTGATCT+GGG + chr8_4:3491147-3491166 Msa1307630:CDS 40.0%
TCAAACATGTAGATTGGTGC+TGG + chr8_4:3491325-3491344 Msa1307630:intron 40.0%
CATTTCAGTACCATGGTCTA+TGG - chr8_4:3491599-3491618 None:intergenic 40.0%
AAGAGAAACTACCTCAGCAT+AGG - chr8_4:3491796-3491815 None:intergenic 40.0%
TCAGTATGCTCCAAAGTCAT+AGG - chr8_4:3491998-3492017 None:intergenic 40.0%
TCAAGTGGATCACTATGCAT+TGG - chr8_4:3492022-3492041 None:intergenic 40.0%
GTTGAGATGGAGGATATAGA+GGG + chr8_4:3492140-3492159 Msa1307630:CDS 40.0%
CTACAGAAAGATTGAGGTAC+CGG + chr8_4:3492244-3492263 Msa1307630:intron 40.0%
! TTGCGCTTTTGCATGTAAAG+CGG + chr8_4:3492406-3492425 Msa1307630:intron 40.0%
CTATCCAATGATTCCGAGAT+AGG + chr8_4:3492837-3492856 Msa1307630:intron 40.0%
TTCACCTATCTCGGAATCAT+TGG - chr8_4:3492844-3492863 None:intergenic 40.0%
AGTTGTTCATCCATGTAGGT+TGG - chr8_4:3493060-3493079 None:intergenic 40.0%
! GTCAAGTTGTTCATCCATGT+AGG - chr8_4:3493064-3493083 None:intergenic 40.0%
AACAACTTGACCTCAATGAG+AGG + chr8_4:3493073-3493092 Msa1307630:CDS 40.0%
AGAAAGAAACTTCAGCTGGT+TGG + chr8_4:3493303-3493322 Msa1307630:CDS 40.0%
ATACTTGCATGCCAAAAGCA+TGG - chr8_4:3493337-3493356 None:intergenic 40.0%
TGTAAGCTCTGTCAGCTATA+TGG - chr8_4:3493395-3493414 None:intergenic 40.0%
TTTCTTGGTTGAGCTATCTC+TGG + chr8_4:3493787-3493806 Msa1307630:CDS 40.0%
ATGAACACGAAGTCGTAAGT+TGG + chr8_4:3494051-3494070 Msa1307630:intron 40.0%
TCAGTGGCATGTTAAAGCTA+GGG - chr8_4:3494102-3494121 None:intergenic 40.0%
ATCAGTGGCATGTTAAAGCT+AGG - chr8_4:3494103-3494122 None:intergenic 40.0%
! TGAACCAGCATGTTTTCTTC+TGG + chr8_4:3494256-3494275 Msa1307630:CDS 40.0%
TTCTCCAGAAGAAAACATGC+TGG - chr8_4:3494263-3494282 None:intergenic 40.0%
!!! TACGTGTGCTGCTTATTTTG+GGG + chr8_4:3494342-3494361 Msa1307630:three_prime_UTR 40.0%
CAACTTTGGTTGCTTGTTCT+AGG + chr8_4:3494393-3494412 Msa1307630:three_prime_UTR 40.0%
CTAGTGTCAGTGAATGCTAG+TGG + chr8_4:3490523-3490542 Msa1307630:five_prime_UTR 45.0%
GGAATGAATCAAGTGGGTCA+TGG + chr8_4:3490866-3490885 Msa1307630:CDS 45.0%
ATGAATCAAGTGGGTCATGG+TGG + chr8_4:3490869-3490888 Msa1307630:CDS 45.0%
!! CATGGTGGTGGAAGAATTGT+TGG + chr8_4:3490884-3490903 Msa1307630:CDS 45.0%
!! CAGAACAGAAGAGCTTTAGG+AGG + chr8_4:3490908-3490927 Msa1307630:CDS 45.0%
ACCCTTGTGTTGTACACAAG+AGG + chr8_4:3490963-3490982 Msa1307630:CDS 45.0%
CCCTCTTGTGTACAACACAA+GGG - chr8_4:3490967-3490986 None:intergenic 45.0%
CCCTTGTGTTGTACACAAGA+GGG + chr8_4:3490964-3490983 Msa1307630:CDS 45.0%
ACCCTCTTGTGTACAACACA+AGG - chr8_4:3490968-3490987 None:intergenic 45.0%
CATCATCCTCACCTTGTGAT+GGG - chr8_4:3491180-3491199 None:intergenic 45.0%
!! ATGTAGATTGGTGCTGGTTG+AGG + chr8_4:3491331-3491350 Msa1307630:intron 45.0%
!! AGGTTTGCTGCACAAATTGC+TGG + chr8_4:3491759-3491778 Msa1307630:CDS 45.0%
GAGTTCATCATCAATGGCGA+TGG - chr8_4:3491951-3491970 None:intergenic 45.0%
GCATAGTGATCCACTTGAGA+TGG + chr8_4:3492024-3492043 Msa1307630:CDS 45.0%
TTAGGAAGAGGTTGAGATGG+AGG + chr8_4:3492130-3492149 Msa1307630:intron 45.0%
GGTTGAGATGGAGGATATAG+AGG + chr8_4:3492139-3492158 Msa1307630:CDS 45.0%
CTGTGTTTCACCAACCTACA+TGG + chr8_4:3493047-3493066 Msa1307630:CDS 45.0%
TTGACCTCAATGAGAGGATG+AGG + chr8_4:3493079-3493098 Msa1307630:CDS 45.0%
TGACCTCAATGAGAGGATGA+GGG + chr8_4:3493080-3493099 Msa1307630:CDS 45.0%
TGAGGGCTATACTAGTTGAC+TGG + chr8_4:3493097-3493116 Msa1307630:CDS 45.0%
! ACTAGTTGACTGGCTGATTG+AGG + chr8_4:3493107-3493126 Msa1307630:CDS 45.0%
GAAACAGTGTCTCTTGCATG+AGG - chr8_4:3493236-3493255 None:intergenic 45.0%
!!! TGGTCTTGTTGCCATGCTTT+TGG + chr8_4:3493323-3493342 Msa1307630:CDS 45.0%
! GCTTTTGGCATGCAAGTATG+AGG + chr8_4:3493338-3493357 Msa1307630:CDS 45.0%
! AGTTTCTGTGCCTGTCGTTT+CGG + chr8_4:3493362-3493381 Msa1307630:CDS 45.0%
TAGCTGACAGAGCTTACACA+AGG + chr8_4:3493397-3493416 Msa1307630:CDS 45.0%
!! TTGAGCATCGACTTCTCCTA+CGG - chr8_4:3493573-3493592 None:intergenic 45.0%
! TTTGAAACAGCTTGAGCTGG+TGG + chr8_4:3493760-3493779 Msa1307630:intron 45.0%
!!! TGAGCTGGTGGCTTTTTTCT+TGG + chr8_4:3493772-3493791 Msa1307630:CDS 45.0%
CTGTCAGAGGTTTCAAACAC+TGG + chr8_4:3493879-3493898 Msa1307630:CDS 45.0%
!! TAGAGAGTGCTCTATGCTGA+TGG + chr8_4:3494145-3494164 Msa1307630:intron 45.0%
TGTGAGAAGCTATACATGGC+TGG - chr8_4:3494310-3494329 None:intergenic 45.0%
!!! ACGTGTGCTGCTTATTTTGG+GGG + chr8_4:3494343-3494362 Msa1307630:three_prime_UTR 45.0%
!! GGTTGCTTGTTCTAGGGAAA+TGG + chr8_4:3494400-3494419 Msa1307630:three_prime_UTR 45.0%
AATCAAGTGGGTCATGGTGG+TGG + chr8_4:3490872-3490891 Msa1307630:CDS 50.0%
GGGCAGAACAGAAGAGCTTT+AGG + chr8_4:3490905-3490924 Msa1307630:CDS 50.0%
TGGGACATAGACCCATCACA+AGG + chr8_4:3491166-3491185 Msa1307630:CDS 50.0%
CATAGACCCATCACAAGGTG+AGG + chr8_4:3491171-3491190 Msa1307630:intron 50.0%
GCATCATCCTCACCTTGTGA+TGG - chr8_4:3491181-3491200 None:intergenic 50.0%
CTCACAGCAATCCTATGCTG+AGG + chr8_4:3491782-3491801 Msa1307630:CDS 50.0%
!! ATAGGCTCTGGTTGGTCTTC+TGG - chr8_4:3491980-3491999 None:intergenic 50.0%
! CCAAAGTCATAGGCTCTGGT+TGG - chr8_4:3491988-3492007 None:intergenic 50.0%
CCAACCAGAGCCTATGACTT+TGG + chr8_4:3491985-3492004 Msa1307630:CDS 50.0%
TGCTCCAAAGTCATAGGCTC+TGG - chr8_4:3491992-3492011 None:intergenic 50.0%
TAGCCCTCATCCTCTCATTG+AGG - chr8_4:3493086-3493105 None:intergenic 50.0%
TGGATCAGATCCGAAACGAC+AGG - chr8_4:3493375-3493394 None:intergenic 50.0%
TCGACTTCTCCTACGGTGTT+TGG - chr8_4:3493566-3493585 None:intergenic 50.0%
CTTGGTTGAGCTATCTCTGG+TGG + chr8_4:3493790-3493809 Msa1307630:CDS 50.0%
GCTGAAGTTTCCACCATCCT+TGG + chr8_4:3493823-3493842 Msa1307630:CDS 50.0%
ACAGCTCAATGCACTGTCAG+AGG + chr8_4:3493866-3493885 Msa1307630:CDS 50.0%
ACTGGAACAAGACATGCGAG+TGG + chr8_4:3493897-3493916 Msa1307630:CDS 50.0%
GAGTGCTCTATGCTGATGGT+TGG + chr8_4:3494149-3494168 Msa1307630:CDS 50.0%
GTTGGATTCCACCAGAAAGC+CGG + chr8_4:3494167-3494186 Msa1307630:CDS 50.0%
! ACGGGAGTGCATAGGAAGTA+TGG + chr8_4:3494203-3494222 Msa1307630:CDS 50.0%
GGAGAACAAGAACCAGCCAT+AGG + chr8_4:3494277-3494296 Msa1307630:CDS 50.0%
!!! CGTGTGCTGCTTATTTTGGG+GGG + chr8_4:3494344-3494363 Msa1307630:three_prime_UTR 50.0%
!!! GTGTGCTGCTTATTTTGGGG+GGG + chr8_4:3494345-3494364 Msa1307630:three_prime_UTR 50.0%
ATGCACTCCCGTCAGTTTCC+CGG - chr8_4:3494195-3494214 None:intergenic 55.0%
! GGAAACTGACGGGAGTGCAT+AGG + chr8_4:3494195-3494214 Msa1307630:CDS 55.0%
! CATGGCTGGCTCTCTTCCTA+TGG - chr8_4:3494296-3494315 None:intergenic 55.0%
GCAGCAGCAACCAAGGATGG+TGG - chr8_4:3493836-3493855 None:intergenic 60.0%
GCAGCAGCAGCAACCAAGGA+TGG - chr8_4:3493839-3493858 None:intergenic 60.0%
GACTGCAGCAGCAGCAACCA+AGG - chr8_4:3493843-3493862 None:intergenic 60.0%
TTCCACCAGAAAGCCGGAGC+CGG + chr8_4:3494173-3494192 Msa1307630:CDS 60.0%
! GCTGGCTCTCTTCCTATGGC+TGG - chr8_4:3494292-3494311 None:intergenic 60.0%
TCCACCAGAAAGCCGGAGCC+GGG + chr8_4:3494174-3494193 Msa1307630:CDS 65.0%
GTTTCCCGGCTCCGGCTTTC+TGG - chr8_4:3494181-3494200 None:intergenic 65.0%
AGCCGGAGCCGGGAAACTGA+CGG + chr8_4:3494184-3494203 Msa1307630:CDS 65.0%
TCCCGTCAGTTTCCCGGCTC+CGG - chr8_4:3494189-3494208 None:intergenic 65.0%
TCCCGGCTCCGGCTTTCTGG+TGG - chr8_4:3494178-3494197 None:intergenic 70.0%
GCCGGAGCCGGGAAACTGAC+GGG + chr8_4:3494185-3494204 Msa1307630:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 3490471 3494641 3490471 ID=Msa1307630;Name=Msa1307630
chr8_4 mRNA 3490471 3494641 3490471 ID=Msa1307630-mRNA-1;Parent=Msa1307630;Name=Msa1307630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=195|1|1|1|1|1|11|343|433
chr8_4 exon 3490471 3490723 3490471 ID=Msa1307630-mRNA-1:exon:1023;Parent=Msa1307630-mRNA-1
chr8_4 exon 3490864 3490996 3490864 ID=Msa1307630-mRNA-1:exon:1024;Parent=Msa1307630-mRNA-1
chr8_4 exon 3491131 3491187 3491131 ID=Msa1307630-mRNA-1:exon:1025;Parent=Msa1307630-mRNA-1
chr8_4 exon 3491758 3491803 3491758 ID=Msa1307630-mRNA-1:exon:1026;Parent=Msa1307630-mRNA-1
chr8_4 exon 3491905 3492045 3491905 ID=Msa1307630-mRNA-1:exon:1027;Parent=Msa1307630-mRNA-1
chr8_4 exon 3492134 3492259 3492134 ID=Msa1307630-mRNA-1:exon:1028;Parent=Msa1307630-mRNA-1
chr8_4 exon 3493039 3493128 3493039 ID=Msa1307630-mRNA-1:exon:1029;Parent=Msa1307630-mRNA-1
chr8_4 exon 3493216 3493437 3493216 ID=Msa1307630-mRNA-1:exon:1030;Parent=Msa1307630-mRNA-1
chr8_4 exon 3493576 3493674 3493576 ID=Msa1307630-mRNA-1:exon:1031;Parent=Msa1307630-mRNA-1
chr8_4 exon 3493770 3493948 3493770 ID=Msa1307630-mRNA-1:exon:1032;Parent=Msa1307630-mRNA-1
chr8_4 exon 3494148 3494641 3494148 ID=Msa1307630-mRNA-1:exon:1033;Parent=Msa1307630-mRNA-1
chr8_4 five_prime_UTR 3490471 3490665 3490471 ID=Msa1307630-mRNA-1:five_prime_utr;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3490666 3490723 3490666 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3490864 3490996 3490864 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3491131 3491187 3491131 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3491758 3491803 3491758 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3491905 3492045 3491905 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3492134 3492259 3492134 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3493039 3493128 3493039 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3493216 3493437 3493216 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3493576 3493674 3493576 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3493770 3493948 3493770 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 CDS 3494148 3494298 3494148 ID=Msa1307630-mRNA-1:cds;Parent=Msa1307630-mRNA-1
chr8_4 three_prime_UTR 3494299 3494641 3494299 ID=Msa1307630-mRNA-1:three_prime_utr;Parent=Msa1307630-mRNA-1
Gene Sequence

>Msa1307630

ATGGTGAATACTTCTGAAGAGAACAATTCCAACGCAGTTATGCCAAGAAAATTTCAAGGAGGAATGAATCAAGTGGGTCATGGTGGTGGAAGAATTGTTGGGCAGAACAGAAGAGCTTTAGGAGGGATCAATCAGAATTTTGTGCATGGTCGACCTTACCCTTGTGTTGTACACAAGAGGGTGTTGTCTGAAAAACATGAGATTTGTGAAAAGAAACAGGCTGATCTGGGACATAGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTGGCTCACAGCAATCCTATGCTGAGAAAAAGAATTCAAATCCATTGAATTCGAATGAGTTTGGAAACTCCATCGCCATTGATGATGAACTCAAGTTACCAGAAGACCAACCAGAGCCTATGACTTTGGAGCATACTGAACCAATGCATAGTGATCCACTTGAGATGGAAGAGGTTGAGATGGAGGATATAGAGGGAGAGATGATTTTGGACATTGATAGCTGTGATGCAAACAATTCTCTTGCTGTTGTGGAGTATATTGAAGATCTCCATGCTTACTACAGAAAGATTGAGTATCTTGGCTGTGTTTCACCAACCTACATGGATGAACAACTTGACCTCAATGAGAGGATGAGGGCTATACTAGTTGACTGGCTGATTGAGGTTCATGACAAATTCGACCTCATGCAAGAGACACTGTTTCTTACAGTTAATCTCATAGACAGATTCTTGGCTAAGCAGAATGTTGTAAGAAAGAAACTTCAGCTGGTTGGTCTTGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTCGTTTCGGATCTGATCCATATAGCTGACAGAGCTTACACAAGGAAAGACATTCTCGAAATGGAGAAGTCGATGCTCAACACTCTGCAGTATAACATGTCTCTTCCAACTGCTTATGTTTTCATGAGAAGGTTTCTGAAGGCTGCTCAAGCTGACAAAAAACTTGAGCTGGTGGCTTTTTTCTTGGTTGAGCTATCTCTGGTGGAATATGAAATGCTGAAGTTTCCACCATCCTTGGTTGCTGCTGCTGCAGTCTACACAGCTCAATGCACTGTCAGAGGTTTCAAACACTGGAACAAGACATGCGAGTGGCACACAAACTACTCAGAAGATCAGCTGTTAGAGTGCTCTATGCTGATGGTTGGATTCCACCAGAAAGCCGGAGCCGGGAAACTGACGGGAGTGCATAGGAAGTATGGCTCAGCAAAATTTAGCTTCACTGCTAAATGTGAACCAGCATGTTTTCTTCTGGAGAACAAGAACCAGCCATAG

Protein sequence

>Msa1307630

MVNTSEENNSNAVMPRKFQGGMNQVGHGGGRIVGQNRRALGGINQNFVHGRPYPCVVHKRVLSEKHEICEKKQADLGHRPITRRFAAQIAGSQQSYAEKKNSNPLNSNEFGNSIAIDDELKLPEDQPEPMTLEHTEPMHSDPLEMEEVEMEDIEGEMILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPTYMDEQLDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKSMLNTLQYNMSLPTAYVFMRRFLKAAQADKKLELVAFFLVELSLVEYEMLKFPPSLVAAAAVYTAQCTVRGFKHWNKTCEWHTNYSEDQLLECSMLMVGFHQKAGAGKLTGVHRKYGSAKFSFTAKCEPACFLLENKNQP*