Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873730 | XP_003618715.1 | 94.070 | 489 | 23 | 3 | 1 | 488 | 1 | 484 | 0.0 | 844 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873730 | sp|Q5XVC4|MDP60_ARATH | 50.524 | 477 | 181 | 12 | 11 | 474 | 32 | 466 | 5.83e-130 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873730 | G7KMP3 | 94.070 | 489 | 23 | 3 | 1 | 488 | 1 | 484 | 0.0 | 844 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0873730 | 0.813105 | 3.029457e-51 | -8.615850e-47 |
| Msa0028420 | Msa0873730 | 0.811095 | 8.307633e-51 | -8.615850e-47 |
| Msa0081570 | Msa0873730 | 0.817285 | 3.568983e-52 | -8.615850e-47 |
| Msa0089630 | Msa0873730 | 0.806696 | 7.256789e-50 | -8.615850e-47 |
| Msa0090400 | Msa0873730 | 0.812552 | 4.003758e-51 | -8.615850e-47 |
| Msa0094780 | Msa0873730 | 0.805308 | 1.421358e-49 | -8.615850e-47 |
| Msa0658880 | Msa0873730 | 0.802488 | 5.478326e-49 | -8.615850e-47 |
| Msa0769180 | Msa0873730 | 0.802190 | 6.309005e-49 | -8.615850e-47 |
| Msa0795870 | Msa0873730 | 0.856882 | 2.382050e-62 | -8.615850e-47 |
| Msa0833650 | Msa0873730 | 0.849962 | 2.309030e-60 | -8.615850e-47 |
| Msa0124280 | Msa0873730 | 0.813011 | 3.175850e-51 | -8.615850e-47 |
| Msa0173730 | Msa0873730 | 0.819926 | 8.984824e-53 | -8.615850e-47 |
| Msa0225100 | Msa0873730 | 0.800689 | 1.281135e-48 | -8.615850e-47 |
| Msa0225860 | Msa0873730 | 0.814151 | 1.783228e-51 | -8.615850e-47 |
| Msa0371030 | Msa0873730 | 0.805768 | 1.138388e-49 | -8.615850e-47 |
| Msa0415320 | Msa0873730 | 0.809605 | 1.742609e-50 | -8.615850e-47 |
| Msa0242590 | Msa0873730 | 0.805558 | 1.259777e-49 | -8.615850e-47 |
| Msa0267110 | Msa0873730 | 0.807610 | 4.647171e-50 | -8.615850e-47 |
| Msa0272660 | Msa0873730 | 0.810275 | 1.250043e-50 | -8.615850e-47 |
| Msa0298470 | Msa0873730 | 0.801159 | 1.027035e-48 | -8.615850e-47 |
| Msa0300270 | Msa0873730 | 0.800418 | 1.454525e-48 | -8.615850e-47 |
| Msa0330380 | Msa0873730 | 0.803726 | 3.038521e-49 | -8.615850e-47 |
| Msa0337700 | Msa0873730 | 0.803749 | 3.004774e-49 | -8.615850e-47 |
| Msa0484380 | Msa0873730 | 0.800134 | 1.661723e-48 | -8.615850e-47 |
| Msa0527860 | Msa0873730 | 0.803240 | 3.830892e-49 | -8.615850e-47 |
| Msa0548470 | Msa0873730 | 0.801499 | 8.746749e-49 | -8.615850e-47 |
| Msa0569200 | Msa0873730 | 0.808663 | 2.772149e-50 | -8.615850e-47 |
| Msa0580370 | Msa0873730 | 0.853063 | 3.060103e-61 | -8.615850e-47 |
| Msa0583830 | Msa0873730 | 0.803629 | 3.182017e-49 | -8.615850e-47 |
| Msa0597790 | Msa0873730 | 0.808878 | 2.493851e-50 | -8.615850e-47 |
| Msa0861510 | Msa0873730 | 0.808182 | 3.512404e-50 | -8.615850e-47 |
| Msa0861600 | Msa0873730 | 0.811440 | 6.993797e-51 | -8.615850e-47 |
| Msa0873730 | Msa0876550 | 0.836564 | 8.693089e-57 | -8.615850e-47 |
| Msa0873730 | Msa0876560 | 0.807062 | 6.071351e-50 | -8.615850e-47 |
| Msa0873730 | Msa0938820 | 0.903320 | 3.918134e-79 | -8.615850e-47 |
| Msa0873730 | Msa0944700 | 0.812789 | 3.553353e-51 | -8.615850e-47 |
| Msa0873730 | Msa1103990 | 0.802268 | 6.079934e-49 | -8.615850e-47 |
| Msa0873730 | Msa1132840 | 0.858075 | 1.056512e-62 | -8.615850e-47 |
| Msa0873730 | Msa1177320 | 0.804711 | 1.894593e-49 | -8.615850e-47 |
| Msa0873730 | Msa1200890 | 0.811527 | 6.697142e-51 | -8.615850e-47 |
| Msa0873730 | Msa1208950 | 0.816221 | 6.185269e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873730 | MtrunA17_Chr6g0454541 | 94.070 | 489 | 23 | 3 | 1 | 488 | 1 | 484 | 0.0 | 844 |
| Msa0873730 | MtrunA17_Chr7g0218721 | 48.692 | 497 | 176 | 14 | 8 | 488 | 23 | 456 | 8.02e-114 | 343 |
| Msa0873730 | MtrunA17_Chr3g0109961 | 46.154 | 117 | 61 | 1 | 370 | 486 | 49 | 163 | 1.41e-25 | 103 |
| Msa0873730 | MtrunA17_Chr4g0051971 | 44.444 | 117 | 63 | 1 | 370 | 486 | 9 | 123 | 1.03e-23 | 96.7 |
| Msa0873730 | MtrunA17_Chr4g0040361 | 26.415 | 212 | 96 | 4 | 314 | 466 | 518 | 728 | 5.95e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873730 | AT5G15510.1 | 51.400 | 500 | 181 | 14 | 11 | 488 | 31 | 490 | 9.60e-142 | 416 |
| Msa0873730 | AT3G01015.1 | 50.524 | 477 | 181 | 12 | 11 | 474 | 32 | 466 | 5.93e-131 | 389 |
| Msa0873730 | AT5G15510.4 | 51.620 | 463 | 162 | 14 | 11 | 451 | 31 | 453 | 2.11e-126 | 376 |
| Msa0873730 | AT5G15510.3 | 51.620 | 463 | 162 | 14 | 11 | 451 | 31 | 453 | 2.11e-126 | 376 |
| Msa0873730 | AT5G15510.2 | 51.620 | 463 | 162 | 14 | 11 | 451 | 31 | 453 | 9.50e-126 | 376 |
| Msa0873730 | AT5G37478.4 | 53.608 | 97 | 45 | 0 | 368 | 464 | 36 | 132 | 1.04e-26 | 105 |
| Msa0873730 | AT5G37478.1 | 53.608 | 97 | 45 | 0 | 368 | 464 | 56 | 152 | 1.52e-26 | 106 |
| Msa0873730 | AT5G37478.2 | 53.608 | 97 | 45 | 0 | 368 | 464 | 23 | 119 | 3.10e-26 | 104 |
| Msa0873730 | AT1G03780.3 | 25.714 | 210 | 97 | 4 | 316 | 466 | 522 | 731 | 6.01e-12 | 68.6 |
| Msa0873730 | AT1G03780.2 | 25.714 | 210 | 97 | 4 | 316 | 466 | 522 | 731 | 6.05e-12 | 68.6 |
Find 106 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGTTACTTAGTATAAAA+AGG | 0.150829 | 6_1:+9316387 | Msa0873730:CDS |
| GTTCACATTCTCAGTTTCTA+AGG | 0.217493 | 6_1:-9315835 | None:intergenic |
| AGGAATAGTGTACCTGAAAA+TGG | 0.245271 | 6_1:+9316335 | Msa0873730:CDS |
| GAACAATCTGAAGTTGTTTC+TGG | 0.251180 | 6_1:+9316518 | Msa0873730:CDS |
| TAAGGCATTGGCTGCGCTTT+AGG | 0.259331 | 6_1:-9318879 | None:intergenic |
| AATTTGATTATTCATGATAT+TGG | 0.263242 | 6_1:+9316200 | Msa0873730:CDS |
| AGAAATATTCAATTTGTATA+TGG | 0.272800 | 6_1:+9319426 | Msa0873730:three_prime_UTR |
| ATGTGAAACTTTGGTTCTTT+TGG | 0.287997 | 6_1:-9319269 | None:intergenic |
| TCACATAAGCAATTGACTTC+TGG | 0.297270 | 6_1:-9319401 | None:intergenic |
| AGAGAATGATAAGAAGAATA+AGG | 0.305347 | 6_1:+9316436 | Msa0873730:CDS |
| GACATCTGAACAACTTGGTT+TGG | 0.311378 | 6_1:+9316577 | Msa0873730:CDS |
| ATGAATAGTCTGTCAAAATA+AGG | 0.322302 | 6_1:-9318897 | None:intergenic |
| GGTGATGAAATGGGCATTAC+CGG | 0.324243 | 6_1:+9316457 | Msa0873730:CDS |
| TCAAGCACTTGATCTTCTTA+TGG | 0.325673 | 6_1:-9319298 | None:intergenic |
| TGGCTGAAGAGGAAGAAATT+AGG | 0.328083 | 6_1:+9318835 | Msa0873730:CDS |
| GGGTTTCAGCTACTTCTTCT+TGG | 0.338322 | 6_1:+9316606 | Msa0873730:CDS |
| TCTAAGGGTTTCTTCTTCTC+TGG | 0.345090 | 6_1:-9315819 | None:intergenic |
| AGAAGAATAAGGTGATGAAA+TGG | 0.354081 | 6_1:+9316447 | Msa0873730:CDS |
| CATGGAAGACCTTGTGCAAT+AGG | 0.357245 | 6_1:-9317400 | None:intergenic |
| ACCTCAGTCCTTAGCTTGAA+TGG | 0.358943 | 6_1:-9317204 | None:intergenic |
| TCATCATCACCATCCTTAAC+AGG | 0.359348 | 6_1:-9316497 | None:intergenic |
| CTTCAGAAATCGTTGAATAA+AGG | 0.377474 | 6_1:+9315885 | Msa0873730:CDS |
| AAAGGGAGAAAGAGAAGAAT+GGG | 0.388957 | 6_1:+9316405 | Msa0873730:CDS |
| GGTTTCAGCTACTTCTTCTT+GGG | 0.396182 | 6_1:+9316607 | Msa0873730:CDS |
| TTGGAATCATCTAGTACTAT+TGG | 0.398723 | 6_1:+9317132 | Msa0873730:CDS |
| AGAGGAAGAAAATGAAGAAA+AGG | 0.403515 | 6_1:+9316259 | Msa0873730:CDS |
| CTATGAAGCTTCACGTCAAT+AGG | 0.408886 | 6_1:-9318470 | None:intergenic |
| GAAGAATAAGGTGATGAAAT+GGG | 0.424705 | 6_1:+9316448 | Msa0873730:CDS |
| TCTTCTTGGGATTGTGGCAG+TGG | 0.425689 | 6_1:+9316620 | Msa0873730:CDS |
| TTTCGCCGCAGAAGAGAATT+CGG | 0.429940 | 6_1:+9315937 | Msa0873730:CDS |
| GTGTGTAGCAGGAATTCTTC+TGG | 0.431259 | 6_1:+9316783 | Msa0873730:CDS |
| GCAACTTCAACAGCCTGTTA+AGG | 0.431444 | 6_1:+9316484 | Msa0873730:CDS |
| AACAACTTGGTTTGGATCAA+AGG | 0.432734 | 6_1:+9316585 | Msa0873730:CDS |
| GAAAGAGAAGAATGGGGAAG+AGG | 0.438587 | 6_1:+9316412 | Msa0873730:CDS |
| AGAACAACAGAAAATAGAAA+TGG | 0.439997 | 6_1:+9318638 | Msa0873730:CDS |
| TCGCGCTGAATTTGATCATC+AGG | 0.442139 | 6_1:+9318511 | Msa0873730:CDS |
| GGCTTTGTGCTTTCTTTCAC+CGG | 0.443138 | 6_1:-9318449 | None:intergenic |
| GAGGAAGAAAATGAAGAAAA+GGG | 0.449465 | 6_1:+9316260 | Msa0873730:CDS |
| TTGATCCACCATTACCTCCT+TGG | 0.450059 | 6_1:-9318921 | None:intergenic |
| AGGAAGAAATTAGGAGATTG+AGG | 0.451722 | 6_1:+9318844 | Msa0873730:CDS |
| GGCTGTTGAAGTTGCAATCC+CGG | 0.458973 | 6_1:-9316476 | None:intergenic |
| TGTTGTGCAGTGTGTGTAGC+AGG | 0.461841 | 6_1:+9316772 | Msa0873730:intron |
| AGAAATGGAAAGACAACAAA+AGG | 0.463028 | 6_1:+9318653 | Msa0873730:CDS |
| GGAATAGTGTACCTGAAAAT+GGG | 0.466587 | 6_1:+9316336 | Msa0873730:CDS |
| GTTGTAGTTCAATGGTGAAA+AGG | 0.470110 | 6_1:+9316285 | Msa0873730:CDS |
| GCTACTTCTTCTTGGGATTG+TGG | 0.470448 | 6_1:+9316614 | Msa0873730:CDS |
| ACAACTTGGTTTGGATCAAA+GGG | 0.474466 | 6_1:+9316586 | Msa0873730:CDS |
| GGGATTGTGGCAGTGGAAGA+AGG | 0.477674 | 6_1:+9316627 | Msa0873730:CDS |
| AAAAGGGAGAAAGAGAAGAA+TGG | 0.480035 | 6_1:+9316404 | Msa0873730:CDS |
| TCCCTTACAGTTGGCTGAAG+AGG | 0.485828 | 6_1:+9318824 | Msa0873730:intron |
| CTCTCAAATTCCGATACGCT+TGG | 0.487598 | 6_1:-9316064 | None:intergenic |
| AAAGGGTAGTTGTAGTTCAA+TGG | 0.496624 | 6_1:+9316277 | Msa0873730:CDS |
| GAAGCTTCATAGTGATTTGA+GGG | 0.499102 | 6_1:+9318481 | Msa0873730:CDS |
| GTACTATTGGAGGAAGGAGG+TGG | 0.500694 | 6_1:+9317145 | Msa0873730:CDS |
| GAAGAAAATGATGAAGAGAA+AGG | 0.500726 | 6_1:+9316146 | Msa0873730:CDS |
| AGAAGAACAGTTGATGAAGA+AGG | 0.503039 | 6_1:+9317339 | Msa0873730:CDS |
| TGAAGCTTCATAGTGATTTG+AGG | 0.503817 | 6_1:+9318480 | Msa0873730:CDS |
| AGCAGATGGAGTGGGGCAAA+AGG | 0.507686 | 6_1:+9319537 | Msa0873730:three_prime_UTR |
| AGAAATTAGGAGATTGAGGA+AGG | 0.508198 | 6_1:+9318848 | Msa0873730:CDS |
| CTATTGCACAAGGTCTTCCA+TGG | 0.513189 | 6_1:+9317401 | Msa0873730:CDS |
| AAGGAGGAGAGAGAGAGTAA+TGG | 0.523139 | 6_1:+9316304 | Msa0873730:CDS |
| AATTCGGCAAAGAAAGTTTG+TGG | 0.527699 | 6_1:+9315953 | Msa0873730:CDS |
| AAATGGGAAAGTGATGCATT+TGG | 0.528141 | 6_1:+9316352 | Msa0873730:CDS |
| TTATTCAACGATTTCTGAAG+TGG | 0.528946 | 6_1:-9315882 | None:intergenic |
| AGAGAGTAATGGAAGAAGCA+AGG | 0.532326 | 6_1:+9316315 | Msa0873730:CDS |
| TGGTGAGGTATGTGAAACTT+TGG | 0.533377 | 6_1:-9319278 | None:intergenic |
| TTCACATTCTCAGTTTCTAA+GGG | 0.533557 | 6_1:-9315834 | None:intergenic |
| TTGACAGACTATTCATTCCA+AGG | 0.533595 | 6_1:+9318904 | Msa0873730:CDS |
| TGATCAAAGTCCTAAGAAAA+CGG | 0.535593 | 6_1:+9315995 | Msa0873730:CDS |
| AGGTGAAAATGTTCTTGAAG+AGG | 0.546375 | 6_1:+9316166 | Msa0873730:CDS |
| GTCAGAAACCATTCAAGCTA+AGG | 0.548312 | 6_1:+9317196 | Msa0873730:CDS |
| ACAGTGCTTGCTAAAACCTC+CGG | 0.548685 | 6_1:+9318430 | Msa0873730:intron |
| ATTTGAGAGAATCACAAGAA+GGG | 0.551972 | 6_1:+9316078 | Msa0873730:CDS |
| GTTTCTGGTTGTGATGATGA+TGG | 0.553660 | 6_1:+9316533 | Msa0873730:CDS |
| GTAGTTCAATGGTGAAAAGG+AGG | 0.555502 | 6_1:+9316288 | Msa0873730:CDS |
| CTTTGCCGAATTCTCTTCTG+CGG | 0.560334 | 6_1:-9315942 | None:intergenic |
| AGTCTGTCAAAATAAGGCAT+TGG | 0.563407 | 6_1:-9318891 | None:intergenic |
| CACTTGATCTTCTTATGGTG+AGG | 0.566706 | 6_1:-9319293 | None:intergenic |
| AGTGTGTTTGCCAAGCGTAT+CGG | 0.567233 | 6_1:+9316054 | Msa0873730:CDS |
| GAATCATCTAGTACTATTGG+AGG | 0.568710 | 6_1:+9317135 | Msa0873730:CDS |
| TAGACATAAGCAGATGGAGT+GGG | 0.571052 | 6_1:+9319529 | Msa0873730:three_prime_UTR |
| TCAGGTTCATCAATAGTCCA+TGG | 0.571822 | 6_1:-9317418 | None:intergenic |
| GTGATGAAATGGGCATTACC+GGG | 0.577552 | 6_1:+9316458 | Msa0873730:CDS |
| TATTCAACGATTTCTGAAGT+GGG | 0.582434 | 6_1:-9315881 | None:intergenic |
| CTTCAACAGCCTGTTAAGGA+TGG | 0.585836 | 6_1:+9316488 | Msa0873730:CDS |
| AATTTGAGAGAATCACAAGA+AGG | 0.588022 | 6_1:+9316077 | Msa0873730:CDS |
| AAGGGAGAAAGAGAAGAATG+GGG | 0.589475 | 6_1:+9316406 | Msa0873730:CDS |
| CGATGAAGAAGAAGGCGTAG+AGG | 0.596905 | 6_1:+9316241 | Msa0873730:CDS |
| ACTTTGACATCTGAACAACT+TGG | 0.600270 | 6_1:+9316572 | Msa0873730:CDS |
| CTGCTATAGACATAAGCAGA+TGG | 0.605285 | 6_1:+9319523 | Msa0873730:three_prime_UTR |
| TGTGGAGAGAACAGCGATGG+TGG | 0.606384 | 6_1:+9316029 | Msa0873730:CDS |
| TGCTTCAACTGAGAATTCAG+AGG | 0.607787 | 6_1:+9319350 | Msa0873730:exon |
| CATCTAGTACTATTGGAGGA+AGG | 0.619078 | 6_1:+9317139 | Msa0873730:CDS |
| TTTGTGCTTTCTTTCACCGG+AGG | 0.623077 | 6_1:-9318446 | None:intergenic |
| GAAAGTGATGCATTTGGTGA+AGG | 0.636336 | 6_1:+9316358 | Msa0873730:CDS |
| CAATTGATAGAATTGATCAA+AGG | 0.648223 | 6_1:-9319481 | None:intergenic |
| CTAGTACTATTGGAGGAAGG+AGG | 0.649542 | 6_1:+9317142 | Msa0873730:CDS |
| ACCATTCAAGCTAAGGACTG+AGG | 0.658037 | 6_1:+9317203 | Msa0873730:CDS |
| ATGAGAATTCCTATTGCACA+AGG | 0.660872 | 6_1:+9317391 | Msa0873730:CDS |
| ATGGACTATTGATGAACCTG+AGG | 0.663121 | 6_1:+9317420 | Msa0873730:CDS |
| AGACATAAGCAGATGGAGTG+GGG | 0.669257 | 6_1:+9319530 | Msa0873730:three_prime_UTR |
| ATAGACATAAGCAGATGGAG+TGG | 0.696142 | 6_1:+9319528 | Msa0873730:three_prime_UTR |
| TGTAGCAGGAATTCTTCTGG+TGG | 0.701277 | 6_1:+9316786 | Msa0873730:CDS |
| ACAGACTATTCATTCCAAGG+AGG | 0.708206 | 6_1:+9318907 | Msa0873730:CDS |
| ATAATGCTATTGCAGCAAAG+GGG | 0.739050 | 6_1:+9317307 | Msa0873730:intron |
| AAATGTGGAGAGAACAGCGA+TGG | 0.759190 | 6_1:+9316026 | Msa0873730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGATTATTCATGATAT+TGG | + | chr6_1:9316200-9316219 | Msa0873730:CDS | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+TGG | + | chr6_1:9316942-9316961 | Msa0873730:intron | 15.0% |
| !!! | TAATTGATGATACAAATAAT+CGG | + | chr6_1:9317226-9317245 | Msa0873730:intron | 15.0% |
| !!! | ATTATTATATTTTGGTTTGA+AGG | + | chr6_1:9319225-9319244 | Msa0873730:intron | 15.0% |
| !! | AGAAATATTCAATTTGTATA+TGG | + | chr6_1:9319426-9319445 | Msa0873730:three_prime_UTR | 15.0% |
| !! | TTCGATTAGAAAAATCATTA+GGG | - | chr6_1:9315860-9315879 | None:intergenic | 20.0% |
| !! | TTTCGATTAGAAAAATCATT+AGG | - | chr6_1:9315861-9315880 | None:intergenic | 20.0% |
| !!! | GAAAAAGAGAATTTTTTTGA+TGG | + | chr6_1:9316107-9316126 | Msa0873730:CDS | 20.0% |
| !! | ACTATAATACTAATGAAGAT+TGG | + | chr6_1:9317043-9317062 | Msa0873730:intron | 20.0% |
| !! | GATTCAATTCACTATTAATA+AGG | + | chr6_1:9317071-9317090 | Msa0873730:intron | 20.0% |
| !! | TAAAATCTCATAGTCAAATT+TGG | + | chr6_1:9317492-9317511 | Msa0873730:intron | 20.0% |
| !! | ATAATGTGTTAACTAAGAAT+AGG | + | chr6_1:9317538-9317557 | Msa0873730:intron | 20.0% |
| !! | ATAAAAAATCTTTACACTGA+CGG | + | chr6_1:9317799-9317818 | Msa0873730:intron | 20.0% |
| !! | TTTGATAAAGAAAAACATTG+AGG | - | chr6_1:9318203-9318222 | None:intergenic | 20.0% |
| !! | TAATAATGAGACAAGAATAA+TGG | - | chr6_1:9319212-9319231 | None:intergenic | 20.0% |
| !!! | CTTGTCTCATTATTATATTT+TGG | + | chr6_1:9319217-9319236 | Msa0873730:intron | 20.0% |
| !!! | AATGAACTTACTTTTCTTTT+TGG | + | chr6_1:9319582-9319601 | Msa0873730:three_prime_UTR | 20.0% |
| ! | AGAGGTTACTTAGTATAAAA+AGG | + | chr6_1:9316387-9316406 | Msa0873730:CDS | 25.0% |
| ! | GAGGTTACTTAGTATAAAAA+GGG | + | chr6_1:9316388-9316407 | Msa0873730:CDS | 25.0% |
| ! | AGAGAATGATAAGAAGAATA+AGG | + | chr6_1:9316436-9316455 | Msa0873730:CDS | 25.0% |
| !!! | AAAATGCAACAAGCTTTAAA+GGG | - | chr6_1:9316683-9316702 | None:intergenic | 25.0% |
| !! | TAAAATGCAACAAGCTTTAA+AGG | - | chr6_1:9316684-9316703 | None:intergenic | 25.0% |
| !!! | GAGTTTGATTTGATACATTT+TGG | + | chr6_1:9316707-9316726 | Msa0873730:intron | 25.0% |
| ! | TACTAAAAATCTATGAAGCA+GGG | - | chr6_1:9317021-9317040 | None:intergenic | 25.0% |
| !!! | AATTTGTGTTTTTTAGAGCT+TGG | + | chr6_1:9317113-9317132 | Msa0873730:intron | 25.0% |
| !!! | AGTTTCTTCAAATTTTTCAG+TGG | + | chr6_1:9317262-9317281 | Msa0873730:intron | 25.0% |
| !!! | AAATTTTTCAGTGGCTATAT+TGG | + | chr6_1:9317271-9317290 | Msa0873730:intron | 25.0% |
| ! | ATGCTAGGATATTAGATATA+AGG | - | chr6_1:9317907-9317926 | None:intergenic | 25.0% |
| ! | GATTAACATAACCTTGTTAA+GGG | - | chr6_1:9318057-9318076 | None:intergenic | 25.0% |
| ! | AGATTAACATAACCTTGTTA+AGG | - | chr6_1:9318058-9318077 | None:intergenic | 25.0% |
| ! | CAAATCTATGATAATTCTGT+TGG | + | chr6_1:9318219-9318238 | Msa0873730:intron | 25.0% |
| ! | TGAATCTATGATAATTCTGT+TGG | + | chr6_1:9318368-9318387 | Msa0873730:intron | 25.0% |
| ! | TCATGATGTGTAAAACTAAA+GGG | - | chr6_1:9318563-9318582 | None:intergenic | 25.0% |
| ! | TTCATGATGTGTAAAACTAA+AGG | - | chr6_1:9318564-9318583 | None:intergenic | 25.0% |
| ! | AGAACAACAGAAAATAGAAA+TGG | + | chr6_1:9318638-9318657 | Msa0873730:CDS | 25.0% |
| ! | AAACATGGTATTTCAAAATC+AGG | - | chr6_1:9318718-9318737 | None:intergenic | 25.0% |
| ! | ATGAATAGTCTGTCAAAATA+AGG | - | chr6_1:9318900-9318919 | None:intergenic | 25.0% |
| !!! | GTATGTTTTTAACAGCTTTT+TGG | + | chr6_1:9318983-9319002 | Msa0873730:intron | 25.0% |
| ! | TCTCAAAATGACAAAATCAA+TGG | + | chr6_1:9319073-9319092 | Msa0873730:intron | 25.0% |
| !!! | GTCATTGATTTGAAATCAAT+TGG | - | chr6_1:9319142-9319161 | None:intergenic | 25.0% |
| ! | ATACACACTTTAATTGATCT+CGG | - | chr6_1:9319164-9319183 | None:intergenic | 25.0% |
| ! | CAATTGATAGAATTGATCAA+AGG | - | chr6_1:9319484-9319503 | None:intergenic | 25.0% |
| TTCACATTCTCAGTTTCTAA+GGG | - | chr6_1:9315837-9315856 | None:intergenic | 30.0% | |
| !! | TATTCAACGATTTCTGAAGT+GGG | - | chr6_1:9315884-9315903 | None:intergenic | 30.0% |
| ! | TTATTCAACGATTTCTGAAG+TGG | - | chr6_1:9315885-9315904 | None:intergenic | 30.0% |
| CTTCAGAAATCGTTGAATAA+AGG | + | chr6_1:9315885-9315904 | Msa0873730:CDS | 30.0% | |
| TGATCAAAGTCCTAAGAAAA+CGG | + | chr6_1:9315995-9316014 | Msa0873730:CDS | 30.0% | |
| ! | TTACACAAAACCGTTTTCTT+AGG | - | chr6_1:9316008-9316027 | None:intergenic | 30.0% |
| !! | AAAACGGTTTTGTGTAAATG+TGG | + | chr6_1:9316011-9316030 | Msa0873730:CDS | 30.0% |
| AATTTGAGAGAATCACAAGA+AGG | + | chr6_1:9316077-9316096 | Msa0873730:CDS | 30.0% | |
| ATTTGAGAGAATCACAAGAA+GGG | + | chr6_1:9316078-9316097 | Msa0873730:CDS | 30.0% | |
| GAAGAAAATGATGAAGAGAA+AGG | + | chr6_1:9316146-9316165 | Msa0873730:CDS | 30.0% | |
| AGAAAAATCGATGAAGAAGA+AGG | + | chr6_1:9316233-9316252 | Msa0873730:CDS | 30.0% | |
| AGAGGAAGAAAATGAAGAAA+AGG | + | chr6_1:9316259-9316278 | Msa0873730:CDS | 30.0% | |
| GAGGAAGAAAATGAAGAAAA+GGG | + | chr6_1:9316260-9316279 | Msa0873730:CDS | 30.0% | |
| AGAAGAATAAGGTGATGAAA+TGG | + | chr6_1:9316447-9316466 | Msa0873730:CDS | 30.0% | |
| GAAGAATAAGGTGATGAAAT+GGG | + | chr6_1:9316448-9316467 | Msa0873730:CDS | 30.0% | |
| CTACTAAAAATCTATGAAGC+AGG | - | chr6_1:9317022-9317041 | None:intergenic | 30.0% | |
| TTGGAATCATCTAGTACTAT+TGG | + | chr6_1:9317132-9317151 | Msa0873730:CDS | 30.0% | |
| TATAATGCTATTGCAGCAAA+GGG | + | chr6_1:9317306-9317325 | Msa0873730:intron | 30.0% | |
| AGCATATGCACTTTAAACTA+AGG | - | chr6_1:9317469-9317488 | None:intergenic | 30.0% | |
| !! | TCATCACTGATTTAAGCTAT+TGG | - | chr6_1:9317636-9317655 | None:intergenic | 30.0% |
| ! | TCTAAAGTCATACACATGAT+GGG | - | chr6_1:9317721-9317740 | None:intergenic | 30.0% |
| !! | TTCTAAAGTCATACACATGA+TGG | - | chr6_1:9317722-9317741 | None:intergenic | 30.0% |
| CAAACGTTTCTAATACTTGA+CGG | + | chr6_1:9317758-9317777 | Msa0873730:intron | 30.0% | |
| GGAGATAACAATTTCCAATT+AGG | + | chr6_1:9317938-9317957 | Msa0873730:intron | 30.0% | |
| TCATAATGTACTGTCCTAAT+TGG | - | chr6_1:9317955-9317974 | None:intergenic | 30.0% | |
| AAGGTTATGTTAATCTCCAA+TGG | + | chr6_1:9318062-9318081 | Msa0873730:intron | 30.0% | |
| TTCATCTTCATATCATGCTT+AGG | - | chr6_1:9318266-9318285 | None:intergenic | 30.0% | |
| GATTCATTCATCTTCACTTT+AGG | - | chr6_1:9318354-9318373 | None:intergenic | 30.0% | |
| CAAAAGAATGCTTAGACTAA+TGG | - | chr6_1:9318408-9318427 | None:intergenic | 30.0% | |
| CATGATGTGTAAAACTAAAG+GGG | - | chr6_1:9318562-9318581 | None:intergenic | 30.0% | |
| AGAAATGGAAAGACAACAAA+AGG | + | chr6_1:9318653-9318672 | Msa0873730:CDS | 30.0% | |
| ACTTTAGATACAGGAAAACA+TGG | - | chr6_1:9318785-9318804 | None:intergenic | 30.0% | |
| TGTATATATTCCCTTACAGT+TGG | + | chr6_1:9318815-9318834 | Msa0873730:intron | 30.0% | |
| !!! | TTTGGTTCTTTTGGTATAGT+TGG | - | chr6_1:9319263-9319282 | None:intergenic | 30.0% |
| !!! | ATGTGAAACTTTGGTTCTTT+TGG | - | chr6_1:9319272-9319291 | None:intergenic | 30.0% |
| GTTCACATTCTCAGTTTCTA+AGG | - | chr6_1:9315838-9315857 | None:intergenic | 35.0% | |
| AATTCGGCAAAGAAAGTTTG+TGG | + | chr6_1:9315953-9315972 | Msa0873730:CDS | 35.0% | |
| AGGTGAAAATGTTCTTGAAG+AGG | + | chr6_1:9316166-9316185 | Msa0873730:CDS | 35.0% | |
| AAAGGGTAGTTGTAGTTCAA+TGG | + | chr6_1:9316277-9316296 | Msa0873730:CDS | 35.0% | |
| GTTGTAGTTCAATGGTGAAA+AGG | + | chr6_1:9316285-9316304 | Msa0873730:CDS | 35.0% | |
| AGGAATAGTGTACCTGAAAA+TGG | + | chr6_1:9316335-9316354 | Msa0873730:CDS | 35.0% | |
| GGAATAGTGTACCTGAAAAT+GGG | + | chr6_1:9316336-9316355 | Msa0873730:CDS | 35.0% | |
| AAATGGGAAAGTGATGCATT+TGG | + | chr6_1:9316352-9316371 | Msa0873730:CDS | 35.0% | |
| AAAAGGGAGAAAGAGAAGAA+TGG | + | chr6_1:9316404-9316423 | Msa0873730:CDS | 35.0% | |
| AAAGGGAGAAAGAGAAGAAT+GGG | + | chr6_1:9316405-9316424 | Msa0873730:CDS | 35.0% | |
| ! | GAACAATCTGAAGTTGTTTC+TGG | + | chr6_1:9316518-9316537 | Msa0873730:CDS | 35.0% |
| ACTTTGACATCTGAACAACT+TGG | + | chr6_1:9316572-9316591 | Msa0873730:CDS | 35.0% | |
| !! | AACAACTTGGTTTGGATCAA+AGG | + | chr6_1:9316585-9316604 | Msa0873730:CDS | 35.0% |
| !! | ACAACTTGGTTTGGATCAAA+GGG | + | chr6_1:9316586-9316605 | Msa0873730:CDS | 35.0% |
| TCCAATGTAATCATACGTGT+CGG | - | chr6_1:9316917-9316936 | None:intergenic | 35.0% | |
| ACAAACACAAACATGGATAC+CGG | - | chr6_1:9316996-9317015 | None:intergenic | 35.0% | |
| GAATCATCTAGTACTATTGG+AGG | + | chr6_1:9317135-9317154 | Msa0873730:CDS | 35.0% | |
| CTATAATGCTATTGCAGCAA+AGG | + | chr6_1:9317305-9317324 | Msa0873730:intron | 35.0% | |
| ATAATGCTATTGCAGCAAAG+GGG | + | chr6_1:9317307-9317326 | Msa0873730:intron | 35.0% | |
| !! | AGAAGAACAGTTGATGAAGA+AGG | + | chr6_1:9317339-9317358 | Msa0873730:CDS | 35.0% |
| ATGAGAATTCCTATTGCACA+AGG | + | chr6_1:9317391-9317410 | Msa0873730:CDS | 35.0% | |
| GATTGTTCATCATGCAAGTA+TGG | + | chr6_1:9317598-9317617 | Msa0873730:intron | 35.0% | |
| !! | ATGATCATTTTTGCTCTTGC+TGG | + | chr6_1:9318020-9318039 | Msa0873730:intron | 35.0% |
| ! | TCAAGACAGTGTTTTACCAT+TGG | - | chr6_1:9318081-9318100 | None:intergenic | 35.0% |
| ACTCCATATCAGCTGATATA+CGG | - | chr6_1:9318104-9318123 | None:intergenic | 35.0% | |
| TGGAGTAAATTCAGTTTCAG+TGG | + | chr6_1:9318118-9318137 | Msa0873730:intron | 35.0% | |
| GTGAGATATTGTGAGCTATA+AGG | - | chr6_1:9318154-9318173 | None:intergenic | 35.0% | |
| ACTCAGAAAATGGCATGAAA+CGG | - | chr6_1:9318176-9318195 | None:intergenic | 35.0% | |
| TTGAGGACAAACTCAGAAAA+TGG | - | chr6_1:9318186-9318205 | None:intergenic | 35.0% | |
| TCATATCATGCTTAGGCTAA+TGG | - | chr6_1:9318259-9318278 | None:intergenic | 35.0% | |
| AATTAAGGTTCAGTGCAGTT+AGG | - | chr6_1:9318303-9318322 | None:intergenic | 35.0% | |
| ! | AGTTGATCTGAGGCTAATTA+AGG | - | chr6_1:9318318-9318337 | None:intergenic | 35.0% |
| ! | AAGTTGATTCAGTTGATCTG+AGG | - | chr6_1:9318328-9318347 | None:intergenic | 35.0% |
| !! | ATAATTCTGTTGGTAGCTTC+TGG | + | chr6_1:9318378-9318397 | Msa0873730:intron | 35.0% |
| TGAAGCTTCATAGTGATTTG+AGG | + | chr6_1:9318480-9318499 | Msa0873730:CDS | 35.0% | |
| GAAGCTTCATAGTGATTTGA+GGG | + | chr6_1:9318481-9318500 | Msa0873730:CDS | 35.0% | |
| TGATGAATGCTTAACTGTGT+AGG | + | chr6_1:9318593-9318612 | Msa0873730:intron | 35.0% | |
| GATGTGAAAGTTGGAAAACA+TGG | - | chr6_1:9318733-9318752 | None:intergenic | 35.0% | |
| ! | TTGATCTGAGATGTGAAAGT+TGG | - | chr6_1:9318742-9318761 | None:intergenic | 35.0% |
| GACAGTAACACTTTAGATAC+AGG | - | chr6_1:9318794-9318813 | None:intergenic | 35.0% | |
| AGGAAGAAATTAGGAGATTG+AGG | + | chr6_1:9318844-9318863 | Msa0873730:CDS | 35.0% | |
| AGAAATTAGGAGATTGAGGA+AGG | + | chr6_1:9318848-9318867 | Msa0873730:CDS | 35.0% | |
| AGTCTGTCAAAATAAGGCAT+TGG | - | chr6_1:9318894-9318913 | None:intergenic | 35.0% | |
| TTGACAGACTATTCATTCCA+AGG | + | chr6_1:9318904-9318923 | Msa0873730:CDS | 35.0% | |
| TATTCATTCCAAGGAGGTAA+TGG | + | chr6_1:9318913-9318932 | Msa0873730:intron | 35.0% | |
| !! | GCTTTTTGGCAATCATTTTG+AGG | + | chr6_1:9318997-9319016 | Msa0873730:intron | 35.0% |
| !!! | TTGGCAATCATTTTGAGGTT+TGG | + | chr6_1:9319002-9319021 | Msa0873730:intron | 35.0% |
| TTACGTGACTGTTGTGAATT+CGG | + | chr6_1:9319184-9319203 | Msa0873730:intron | 35.0% | |
| TCAAGCACTTGATCTTCTTA+TGG | - | chr6_1:9319301-9319320 | None:intergenic | 35.0% | |
| ! | TCACATAAGCAATTGACTTC+TGG | - | chr6_1:9319404-9319423 | None:intergenic | 35.0% |
| TCTAAGGGTTTCTTCTTCTC+TGG | - | chr6_1:9315822-9315841 | None:intergenic | 40.0% | |
| GTAGTTCAATGGTGAAAAGG+AGG | + | chr6_1:9316288-9316307 | Msa0873730:CDS | 40.0% | |
| ! | AGAGAGTAATGGAAGAAGCA+AGG | + | chr6_1:9316315-9316334 | Msa0873730:CDS | 40.0% |
| ! | TGCATCACTTTCCCATTTTC+AGG | - | chr6_1:9316350-9316369 | None:intergenic | 40.0% |
| ! | GAAAGTGATGCATTTGGTGA+AGG | + | chr6_1:9316358-9316377 | Msa0873730:CDS | 40.0% |
| !! | ATTTGGTGAAGGCTTTTGAG+AGG | + | chr6_1:9316369-9316388 | Msa0873730:CDS | 40.0% |
| AAGGGAGAAAGAGAAGAATG+GGG | + | chr6_1:9316406-9316425 | Msa0873730:CDS | 40.0% | |
| TCATCATCACCATCCTTAAC+AGG | - | chr6_1:9316500-9316519 | None:intergenic | 40.0% | |
| !! | GTTTCTGGTTGTGATGATGA+TGG | + | chr6_1:9316533-9316552 | Msa0873730:CDS | 40.0% |
| GACATCTGAACAACTTGGTT+TGG | + | chr6_1:9316577-9316596 | Msa0873730:CDS | 40.0% | |
| GGTTTCAGCTACTTCTTCTT+GGG | + | chr6_1:9316607-9316626 | Msa0873730:CDS | 40.0% | |
| CCTTCTGATTAAGTCATGTC+CGG | + | chr6_1:9316882-9316901 | Msa0873730:intron | 40.0% | |
| ACCGACACGTATGATTACAT+TGG | + | chr6_1:9316913-9316932 | Msa0873730:intron | 40.0% | |
| GTTAGTGTTTGTGTCATGTC+CGG | + | chr6_1:9316974-9316993 | Msa0873730:intron | 40.0% | |
| CATCTAGTACTATTGGAGGA+AGG | + | chr6_1:9317139-9317158 | Msa0873730:CDS | 40.0% | |
| GTCAGAAACCATTCAAGCTA+AGG | + | chr6_1:9317196-9317215 | Msa0873730:CDS | 40.0% | |
| !! | TGGCTATATTGGTGATGCAT+TGG | + | chr6_1:9317282-9317301 | Msa0873730:intron | 40.0% |
| TCAGGTTCATCAATAGTCCA+TGG | - | chr6_1:9317421-9317440 | None:intergenic | 40.0% | |
| ! | ATGGACTATTGATGAACCTG+AGG | + | chr6_1:9317420-9317439 | Msa0873730:CDS | 40.0% |
| CTATTGATGAACCTGAGGTA+AGG | + | chr6_1:9317425-9317444 | Msa0873730:intron | 40.0% | |
| TGAGAAAATGACCTTACCTC+AGG | - | chr6_1:9317439-9317458 | None:intergenic | 40.0% | |
| CTTGCATGATGAACAATCAG+AGG | - | chr6_1:9317596-9317615 | None:intergenic | 40.0% | |
| ATCCTAGCATACACATGACA+AGG | + | chr6_1:9317917-9317936 | Msa0873730:intron | 40.0% | |
| !! | TTTTGCTCTTGCTGGTTGTT+TGG | + | chr6_1:9318028-9318047 | Msa0873730:intron | 40.0% |
| TTGTTTGGCTACCCTTAACA+AGG | + | chr6_1:9318043-9318062 | Msa0873730:intron | 40.0% | |
| TGACCGTATATCAGCTGATA+TGG | + | chr6_1:9318098-9318117 | Msa0873730:intron | 40.0% | |
| CTATGAAGCTTCACGTCAAT+AGG | - | chr6_1:9318473-9318492 | None:intergenic | 40.0% | |
| TGAATGCTTAACTGTGTAGG+TGG | + | chr6_1:9318596-9318615 | Msa0873730:intron | 40.0% | |
| TGGCTGAAGAGGAAGAAATT+AGG | + | chr6_1:9318835-9318854 | Msa0873730:CDS | 40.0% | |
| ACAGACTATTCATTCCAAGG+AGG | + | chr6_1:9318907-9318926 | Msa0873730:CDS | 40.0% | |
| CATGACGCAGTTATTGATCT+TGG | + | chr6_1:9319042-9319061 | Msa0873730:intron | 40.0% | |
| TGGTGAGGTATGTGAAACTT+TGG | - | chr6_1:9319281-9319300 | None:intergenic | 40.0% | |
| CACTTGATCTTCTTATGGTG+AGG | - | chr6_1:9319296-9319315 | None:intergenic | 40.0% | |
| TGCTTCAACTGAGAATTCAG+AGG | + | chr6_1:9319350-9319369 | Msa0873730:exon | 40.0% | |
| CTGCTATAGACATAAGCAGA+TGG | + | chr6_1:9319523-9319542 | Msa0873730:three_prime_UTR | 40.0% | |
| ATAGACATAAGCAGATGGAG+TGG | + | chr6_1:9319528-9319547 | Msa0873730:three_prime_UTR | 40.0% | |
| TAGACATAAGCAGATGGAGT+GGG | + | chr6_1:9319529-9319548 | Msa0873730:three_prime_UTR | 40.0% | |
| TTTCGCCGCAGAAGAGAATT+CGG | + | chr6_1:9315937-9315956 | Msa0873730:CDS | 45.0% | |
| CTTTGCCGAATTCTCTTCTG+CGG | - | chr6_1:9315945-9315964 | None:intergenic | 45.0% | |
| AAATGTGGAGAGAACAGCGA+TGG | + | chr6_1:9316026-9316045 | Msa0873730:CDS | 45.0% | |
| AGTGTGTTTGCCAAGCGTAT+CGG | + | chr6_1:9316054-9316073 | Msa0873730:CDS | 45.0% | |
| CTCTCAAATTCCGATACGCT+TGG | - | chr6_1:9316067-9316086 | None:intergenic | 45.0% | |
| AAGGAGGAGAGAGAGAGTAA+TGG | + | chr6_1:9316304-9316323 | Msa0873730:CDS | 45.0% | |
| GAAAGAGAAGAATGGGGAAG+AGG | + | chr6_1:9316412-9316431 | Msa0873730:CDS | 45.0% | |
| GGTGATGAAATGGGCATTAC+CGG | + | chr6_1:9316457-9316476 | Msa0873730:CDS | 45.0% | |
| GTGATGAAATGGGCATTACC+GGG | + | chr6_1:9316458-9316477 | Msa0873730:CDS | 45.0% | |
| GCAACTTCAACAGCCTGTTA+AGG | + | chr6_1:9316484-9316503 | Msa0873730:CDS | 45.0% | |
| CTTCAACAGCCTGTTAAGGA+TGG | + | chr6_1:9316488-9316507 | Msa0873730:CDS | 45.0% | |
| GGGTTTCAGCTACTTCTTCT+TGG | + | chr6_1:9316606-9316625 | Msa0873730:CDS | 45.0% | |
| GCTACTTCTTCTTGGGATTG+TGG | + | chr6_1:9316614-9316633 | Msa0873730:CDS | 45.0% | |
| GTGTGTAGCAGGAATTCTTC+TGG | + | chr6_1:9316783-9316802 | Msa0873730:CDS | 45.0% | |
| TGTAGCAGGAATTCTTCTGG+TGG | + | chr6_1:9316786-9316805 | Msa0873730:CDS | 45.0% | |
| CCGGACATGACTTAATCAGA+AGG | - | chr6_1:9316885-9316904 | None:intergenic | 45.0% | |
| CAGGGACACAAACACAAACA+TGG | - | chr6_1:9317003-9317022 | None:intergenic | 45.0% | |
| CTAGTACTATTGGAGGAAGG+AGG | + | chr6_1:9317142-9317161 | Msa0873730:CDS | 45.0% | |
| ACCATTCAAGCTAAGGACTG+AGG | + | chr6_1:9317203-9317222 | Msa0873730:CDS | 45.0% | |
| ! | ACCTCAGTCCTTAGCTTGAA+TGG | - | chr6_1:9317207-9317226 | None:intergenic | 45.0% |
| CATGGAAGACCTTGTGCAAT+AGG | - | chr6_1:9317403-9317422 | None:intergenic | 45.0% | |
| CTATTGCACAAGGTCTTCCA+TGG | + | chr6_1:9317401-9317420 | Msa0873730:CDS | 45.0% | |
| GATGAACAATCAGAGGCTGA+TGG | - | chr6_1:9317589-9317608 | None:intergenic | 45.0% | |
| CTCCTTGTCATGTGTATGCT+AGG | - | chr6_1:9317922-9317941 | None:intergenic | 45.0% | |
| ! | ACAGTGCTTGCTAAAACCTC+CGG | + | chr6_1:9318430-9318449 | Msa0873730:intron | 45.0% |
| TTTGTGCTTTCTTTCACCGG+AGG | - | chr6_1:9318449-9318468 | None:intergenic | 45.0% | |
| ! | GGCTTTGTGCTTTCTTTCAC+CGG | - | chr6_1:9318452-9318471 | None:intergenic | 45.0% |
| TCGCGCTGAATTTGATCATC+AGG | + | chr6_1:9318511-9318530 | Msa0873730:CDS | 45.0% | |
| TCCTCTTCAGCCAACTGTAA+GGG | - | chr6_1:9318828-9318847 | None:intergenic | 45.0% | |
| TTCCTCTTCAGCCAACTGTA+AGG | - | chr6_1:9318829-9318848 | None:intergenic | 45.0% | |
| ! | TCATTCCAAGGAGGTAATGG+TGG | + | chr6_1:9318916-9318935 | Msa0873730:intron | 45.0% |
| TTGATCCACCATTACCTCCT+TGG | - | chr6_1:9318924-9318943 | None:intergenic | 45.0% | |
| AGACATAAGCAGATGGAGTG+GGG | + | chr6_1:9319530-9319549 | Msa0873730:three_prime_UTR | 45.0% | |
| ! | CGATGAAGAAGAAGGCGTAG+AGG | + | chr6_1:9316241-9316260 | Msa0873730:CDS | 50.0% |
| GGCTGTTGAAGTTGCAATCC+CGG | - | chr6_1:9316479-9316498 | None:intergenic | 50.0% | |
| TCTTCTTGGGATTGTGGCAG+TGG | + | chr6_1:9316620-9316639 | Msa0873730:CDS | 50.0% | |
| TGTTGTGCAGTGTGTGTAGC+AGG | + | chr6_1:9316772-9316791 | Msa0873730:intron | 50.0% | |
| GTACTATTGGAGGAAGGAGG+TGG | + | chr6_1:9317145-9317164 | Msa0873730:CDS | 50.0% | |
| TCCCTTACAGTTGGCTGAAG+AGG | + | chr6_1:9318824-9318843 | Msa0873730:intron | 50.0% | |
| !! | TAAGGCATTGGCTGCGCTTT+AGG | - | chr6_1:9318882-9318901 | None:intergenic | 50.0% |
| TGTGGAGAGAACAGCGATGG+TGG | + | chr6_1:9316029-9316048 | Msa0873730:CDS | 55.0% | |
| GGGATTGTGGCAGTGGAAGA+AGG | + | chr6_1:9316627-9316646 | Msa0873730:CDS | 55.0% | |
| !! | TACGTGTCGGTGTCAGACAC+CGG | - | chr6_1:9316904-9316923 | None:intergenic | 55.0% |
| AGCAGATGGAGTGGGGCAAA+AGG | + | chr6_1:9319537-9319556 | Msa0873730:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 9315813 | 9319646 | 9315813 | ID=Msa0873730;Name=Msa0873730 |
| chr6_1 | mRNA | 9315813 | 9319646 | 9315813 | ID=Msa0873730-mRNA-1;Parent=Msa0873730;Name=Msa0873730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.87|1|1|1|8|285|488 |
| chr6_1 | exon | 9315813 | 9316648 | 9315813 | ID=Msa0873730-mRNA-1:exon:2845;Parent=Msa0873730-mRNA-1 |
| chr6_1 | exon | 9316782 | 9316827 | 9316782 | ID=Msa0873730-mRNA-1:exon:2846;Parent=Msa0873730-mRNA-1 |
| chr6_1 | exon | 9317129 | 9317224 | 9317129 | ID=Msa0873730-mRNA-1:exon:2847;Parent=Msa0873730-mRNA-1 |
| chr6_1 | exon | 9317322 | 9317441 | 9317322 | ID=Msa0873730-mRNA-1:exon:2848;Parent=Msa0873730-mRNA-1 |
| chr6_1 | exon | 9318434 | 9318532 | 9318434 | ID=Msa0873730-mRNA-1:exon:2849;Parent=Msa0873730-mRNA-1 |
| chr6_1 | exon | 9318615 | 9318674 | 9318615 | ID=Msa0873730-mRNA-1:exon:2850;Parent=Msa0873730-mRNA-1 |
| chr6_1 | exon | 9318834 | 9318928 | 9318834 | ID=Msa0873730-mRNA-1:exon:2851;Parent=Msa0873730-mRNA-1 |
| chr6_1 | exon | 9319247 | 9319646 | 9319247 | ID=Msa0873730-mRNA-1:exon:2852;Parent=Msa0873730-mRNA-1 |
| chr6_1 | CDS | 9315813 | 9316648 | 9315813 | ID=Msa0873730-mRNA-1:cds;Parent=Msa0873730-mRNA-1 |
| chr6_1 | CDS | 9316782 | 9316827 | 9316782 | ID=Msa0873730-mRNA-1:cds;Parent=Msa0873730-mRNA-1 |
| chr6_1 | CDS | 9317129 | 9317224 | 9317129 | ID=Msa0873730-mRNA-1:cds;Parent=Msa0873730-mRNA-1 |
| chr6_1 | CDS | 9317322 | 9317441 | 9317322 | ID=Msa0873730-mRNA-1:cds;Parent=Msa0873730-mRNA-1 |
| chr6_1 | CDS | 9318434 | 9318532 | 9318434 | ID=Msa0873730-mRNA-1:cds;Parent=Msa0873730-mRNA-1 |
| chr6_1 | CDS | 9318615 | 9318674 | 9318615 | ID=Msa0873730-mRNA-1:cds;Parent=Msa0873730-mRNA-1 |
| chr6_1 | CDS | 9318834 | 9318928 | 9318834 | ID=Msa0873730-mRNA-1:cds;Parent=Msa0873730-mRNA-1 |
| chr6_1 | CDS | 9319247 | 9319361 | 9319247 | ID=Msa0873730-mRNA-1:cds;Parent=Msa0873730-mRNA-1 |
| chr6_1 | three_prime_UTR | 9319362 | 9319646 | 9319362 | ID=Msa0873730-mRNA-1:three_prime_utr;Parent=Msa0873730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
