AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0330380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0330380 MtrunA17_Chr2g0312631 94.444 198 10 1 1 197 1 198 6.29e-130 390
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0330380 AT1G72250.1 39.444 180 80 6 12 185 6 162 1.26e-21 92.8
Msa0330380 AT1G72250.4 39.444 180 80 6 12 185 6 162 1.31e-21 92.8
Msa0330380 AT1G72250.2 42.045 176 82 7 12 185 6 163 1.92e-21 92.0
Msa0330380 AT1G72250.3 42.045 176 82 7 12 185 6 163 2.22e-21 92.0

Find 218 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAGCACCTTTAATATATT+TGG 0.106880 2_4:-44707641 None:intergenic
CTCATTCTGAAGCTCGTTTA+AGG 0.121232 2_4:-44707007 None:intergenic
ATAAGAGATTTGCTGGTTTC+AGG 0.166433 2_4:+44708215 Msa0330380:three_prime_UTR
CATTGGACAGATTATGAAAA+TGG 0.173410 2_4:+44707395 Msa0330380:intron
TATGAAATGGAATTTGATTT+TGG 0.218528 2_4:-44705526 None:intergenic
AAAGTTCACACATCCCTTTC+AGG 0.220871 2_4:+44708873 Msa0330380:three_prime_UTR
TGATGCAGCAAAACCCTTAA+TGG 0.224000 2_4:+44710472 Msa0330380:three_prime_UTR
TTTAAATTTGATGCTGTCTT+TGG 0.236666 2_4:+44707841 Msa0330380:three_prime_UTR
GTTTCAGGACGGTCGATATT+AGG 0.253299 2_4:+44706259 Msa0330380:intron
TTTGGATAAAACCAAGTTAA+TGG 0.255597 2_4:-44705403 None:intergenic
CTACAATTTGGATTCATCTA+TGG 0.263301 2_4:+44706387 Msa0330380:CDS
CAATGATGATTAATCAATAA+AGG 0.265301 2_4:-44705614 None:intergenic
TTGTTCTTCTTAAACAATTC+AGG 0.271532 2_4:-44706358 None:intergenic
TTGCATTGCTGCCAGTTTGT+AGG 0.273138 2_4:-44708607 None:intergenic
ATTTAACAGTTGGAGTCTTA+TGG 0.285148 2_4:-44706462 None:intergenic
CTTAAGTCCAAATATATTAA+AGG 0.289526 2_4:+44707634 Msa0330380:three_prime_UTR
TTTGTTTGTAAGTAGCAATT+TGG 0.294240 2_4:-44706663 None:intergenic
GCAGTAACAAGGAGGGAGTT+AGG 0.320592 2_4:+44706928 Msa0330380:three_prime_UTR
TTCGATGACCTCACCAGATT+TGG 0.327168 2_4:+44706285 Msa0330380:CDS
TATTGGAAGTAGAGGGAAAT+TGG 0.331287 2_4:+44710955 Msa0330380:three_prime_UTR
CATTCACTGTGTCATGGTTA+AGG 0.333585 2_4:+44708679 Msa0330380:three_prime_UTR
CAGTCCTAATGAAAACGATT+TGG 0.334507 2_4:+44709438 Msa0330380:three_prime_UTR
TCGATGCATGTAGGATCTTT+AGG 0.336030 2_4:+44707042 Msa0330380:three_prime_UTR
TACCTTCTTGCAGACATTCC+TGG 0.346523 2_4:-44708245 None:intergenic
GGCTCCTCCTTTCATCTCTT+CGG 0.350881 2_4:-44707743 None:intergenic
TTTAAGATGTTCTCCATTAA+GGG 0.351492 2_4:-44710485 None:intergenic
TGAGCAAATAAGAGATTTGC+TGG 0.352831 2_4:+44708208 Msa0330380:three_prime_UTR
TGAAGCAGATATAAGTGAAA+TGG 0.353707 2_4:+44707461 Msa0330380:three_prime_UTR
TTCCTCATTGACTGGTAACT+TGG 0.357289 2_4:-44710738 None:intergenic
GACTCGTCGTCTTTAGTTAC+CGG 0.361076 2_4:-44706562 None:intergenic
AGTCTCGAGGAGTTAATTTC+AGG 0.361158 2_4:+44708099 Msa0330380:three_prime_UTR
CAGTAACAAGGAGGGAGTTA+GGG 0.363467 2_4:+44706929 Msa0330380:three_prime_UTR
TTTAGCAGAATCAAAATCTA+AGG 0.366085 2_4:-44707773 None:intergenic
TTTCAGGACGGTCGATATTA+GGG 0.367700 2_4:+44706260 Msa0330380:intron
TAAGAGATTTGCTGGTTTCA+GGG 0.386403 2_4:+44708216 Msa0330380:three_prime_UTR
AGGAGACGCAAAATATTAAT+AGG 0.387212 2_4:+44708807 Msa0330380:three_prime_UTR
TAACTGATTCCAGCATTATC+TGG 0.388840 2_4:-44706325 None:intergenic
GGAGCTTTCTATTGTAGAAA+AGG 0.390767 2_4:-44710522 None:intergenic
TGTCAAATGGATCTCCAAAA+AGG 0.391123 2_4:+44707815 Msa0330380:three_prime_UTR
AGAGCTTTATAATAAGGTAT+TGG 0.393271 2_4:+44707672 Msa0330380:three_prime_UTR
ATTGTGATCAATGCACTTGA+TGG 0.400880 2_4:-44710543 None:intergenic
TGTGCATTGGATTCTGACTT+TGG 0.400935 2_4:-44705421 None:intergenic
AAAAGCGGTGTTAAGAAGAT+AGG 0.402104 2_4:+44710821 Msa0330380:three_prime_UTR
TAGAGTAAGGGGAATAGAAC+TGG 0.405363 2_4:+44709492 Msa0330380:three_prime_UTR
GTGAATATTAGCTTTACATA+AGG 0.408880 2_4:+44706633 Msa0330380:three_prime_UTR
AGAAGATGGTAGAGTGTCTC+AGG 0.409212 2_4:+44706720 Msa0330380:three_prime_UTR
AATGATGATTAATCAATAAA+GGG 0.419743 2_4:-44705613 None:intergenic
ACATTGTAAACTTCAACTTC+AGG 0.420354 2_4:-44706439 None:intergenic
TTTGCAGCATTTGCTATTGA+GGG 0.421747 2_4:+44707238 Msa0330380:intron
GGTGAAGGAATGCATATTCC+AGG 0.422465 2_4:+44708539 Msa0330380:three_prime_UTR
AAGGGAGAAAATTTGTTGAA+TGG 0.423015 2_4:+44708698 Msa0330380:three_prime_UTR
GAGAAAGTGAGAGTCTCTAT+TGG 0.423026 2_4:+44710938 Msa0330380:three_prime_UTR
TTCCTTCGGCAGCTACTTCA+AGG 0.431557 2_4:+44710660 Msa0330380:three_prime_UTR
TAGAGGGAAATTGGCACAAA+GGG 0.431771 2_4:+44710964 Msa0330380:three_prime_UTR
AGTCCTAATGAAAACGATTT+GGG 0.433576 2_4:+44709439 Msa0330380:three_prime_UTR
TACATAAGAAAGGTCAAGTT+AGG 0.439468 2_4:+44710864 Msa0330380:three_prime_UTR
AATTACCTTGTTCAACTTGA+GGG 0.440575 2_4:-44707864 None:intergenic
GCAGAACAGATCACCAAATC+TGG 0.442853 2_4:-44706298 None:intergenic
GAAGCAGATATAAGTGAAAT+GGG 0.443694 2_4:+44707462 Msa0330380:three_prime_UTR
TTCTGTGCCCTCCATTGTGA+AGG 0.446983 2_4:-44708075 None:intergenic
GTAGAAAAGGGTATACTGTA+AGG 0.447075 2_4:-44710509 None:intergenic
TTAATTGTAGATTGGAGATA+AGG 0.447438 2_4:+44708510 Msa0330380:intron
TTATGGCTTGTGGACTTAGC+AGG 0.447568 2_4:+44708740 Msa0330380:three_prime_UTR
GAAAGGATAATAACCTGAAA+GGG 0.452222 2_4:-44708886 None:intergenic
CTGGTTTCAGGGAATCATCC+AGG 0.454988 2_4:+44708227 Msa0330380:three_prime_UTR
ATTCACTGTGTCATGGTTAA+GGG 0.456098 2_4:+44708680 Msa0330380:three_prime_UTR
AAAGTTGGTGGTGTAAATGT+AGG 0.459188 2_4:+44710911 Msa0330380:three_prime_UTR
AATAGGTCTCTTTCTGCACT+TGG 0.459696 2_4:+44708824 Msa0330380:three_prime_UTR
CAACATCACATGAGAAAAGT+TGG 0.460118 2_4:+44710896 Msa0330380:three_prime_UTR
TGAAGCTCAAAGGAAGCTTC+AGG 0.460404 2_4:-44706532 None:intergenic
GTTTCTGATTCCTCATTGAC+TGG 0.460792 2_4:-44710746 None:intergenic
TGTGAAAATTTGACCGTTGG+AGG 0.460926 2_4:-44705493 None:intergenic
TTTGCATATGCTTTGTGCAT+TGG 0.462488 2_4:-44705434 None:intergenic
GAGCTTACTGTACTGTCAAA+TGG 0.464565 2_4:+44707802 Msa0330380:three_prime_UTR
CTTTATAGCTGATATCTTCG+AGG 0.465431 2_4:+44707971 Msa0330380:intron
GGAACACATGAAGCTATTAG+AGG 0.468051 2_4:+44707416 Msa0330380:three_prime_UTR
GAAAATGTTTGATATAATCA+AGG 0.473899 2_4:+44708130 Msa0330380:three_prime_UTR
AAATCATCCTAACCATAACT+AGG 0.477344 2_4:-44705973 None:intergenic
TGTGGAGGAAACCCTAGTTA+TGG 0.477618 2_4:+44705961 Msa0330380:CDS
GGACTTTCAAATCAAGAAGA+TGG 0.479822 2_4:+44709769 Msa0330380:three_prime_UTR
AAGGATCTTACTAGTGGAAG+TGG 0.481781 2_4:-44705779 None:intergenic
AAATTCTTGAGAGTTGCTAA+TGG 0.481795 2_4:-44710446 None:intergenic
TGTAGGATGAAGAGGATGTT+GGG 0.483797 2_4:+44706848 Msa0330380:intron
GATGACACCGCGCATTCCTT+CGG 0.484135 2_4:+44710646 Msa0330380:three_prime_UTR
TGGAGTTGAGAGGAAACATA+AGG 0.485914 2_4:+44707692 Msa0330380:three_prime_UTR
TCGTCTTTAGTTACCGGCGG+TGG 0.487968 2_4:-44706556 None:intergenic
GAAGCATCAGTTAGAAGAAG+AGG 0.490605 2_4:-44705736 None:intergenic
CGAGTCCAAAATGAAGGAAA+AGG 0.491415 2_4:+44709811 Msa0330380:three_prime_UTR
TTTGAAACTGTGTTAAGCTT+GGG 0.492037 2_4:-44710703 None:intergenic
TACAAACTGGCAGCAATGCA+AGG 0.492150 2_4:+44708609 Msa0330380:three_prime_UTR
GTGTGGGAAGTCCTACAAAC+TGG 0.492159 2_4:+44708596 Msa0330380:three_prime_UTR
GGTGAGACTAACTCTTCCTC+TGG 0.494082 2_4:-44706511 None:intergenic
GTACACTTCTAAGACACTTA+CGG 0.496106 2_4:-44708183 None:intergenic
GGGAGTTAGGGGAGCTCAAG+AGG 0.499734 2_4:+44706941 Msa0330380:three_prime_UTR
TCTAAAACTGAGGTTGCAAA+TGG 0.500778 2_4:-44708002 None:intergenic
AATGGTAGTAGAAGAGGTGG+TGG 0.501749 2_4:+44711001 Msa0330380:three_prime_UTR
CCTTGTGAAAATTTGACCGT+TGG 0.503003 2_4:-44705496 None:intergenic
TTGCAGCAAGTGTGTAAGCT+TGG 0.503358 2_4:-44709257 None:intergenic
GGGTTTCCTCCACAAGATTG+AGG 0.503956 2_4:-44705952 None:intergenic
TAATGGTTGTGAACAGTTGG+TGG 0.504192 2_4:-44710768 None:intergenic
AAACAAAACTCTTCAAGATA+AGG 0.505383 2_4:+44709841 Msa0330380:three_prime_UTR
GATTTATTATCAGCCAAGTC+GGG 0.509352 2_4:-44710581 None:intergenic
GAGCTTTCTATTGTAGAAAA+GGG 0.509618 2_4:-44710521 None:intergenic
GCATATGGACAAACTGGTAC+CGG 0.511361 2_4:+44708047 Msa0330380:three_prime_UTR
TAATTACCTTGTTCAACTTG+AGG 0.511569 2_4:-44707865 None:intergenic
AGAAAGGATAATAACCTGAA+AGG 0.511941 2_4:-44708887 None:intergenic
TCTCTCGAGAATGGTATCAA+TGG 0.512025 2_4:+44706415 Msa0330380:CDS
AAATTTGCAGGTGAAGGAGC+TGG 0.514049 2_4:+44710292 Msa0330380:intron
ATGGAGCTTTCTCTCGAGAA+TGG 0.518965 2_4:+44706406 Msa0330380:CDS
CACAGTGAATGCAGTGCGAT+CGG 0.520113 2_4:-44708667 None:intergenic
AAATTTGAAAGGTGATAAGC+GGG 0.520689 2_4:-44705464 None:intergenic
CGATTTATTATCAGCCAAGT+CGG 0.523497 2_4:-44710582 None:intergenic
CAAATATATTAAAGGTGCTA+AGG 0.524207 2_4:+44707642 Msa0330380:three_prime_UTR
GTTTGAAACTGTGTTAAGCT+TGG 0.524361 2_4:-44710704 None:intergenic
AGTGCAAGGTGATAGATTGA+AGG 0.525373 2_4:+44708787 Msa0330380:three_prime_UTR
TCAACACAAGAATAGTCATA+AGG 0.526893 2_4:+44711036 Msa0330380:three_prime_UTR
AGAGTCTCTATTGGAAGTAG+AGG 0.529284 2_4:+44710947 Msa0330380:three_prime_UTR
GGAGTTGAGAGGAAACATAA+GGG 0.530728 2_4:+44707693 Msa0330380:three_prime_UTR
GACGATGAAATGTTAGAAGA+TGG 0.533874 2_4:+44706706 Msa0330380:three_prime_UTR
AGAAGAAGCATACATAAGAA+AGG 0.534021 2_4:+44710854 Msa0330380:three_prime_UTR
TAGTCATAAGGACAAGGAAA+GGG 0.535307 2_4:+44711048 Msa0330380:three_prime_UTR
TTCATCTCTTCGGCATTGAG+AGG 0.536800 2_4:-44707733 None:intergenic
TTGTAGGATGAAGAGGATGT+TGG 0.537117 2_4:+44706847 Msa0330380:intron
TCATTTGTAAATTCTGCATG+TGG 0.538556 2_4:+44711220 Msa0330380:three_prime_UTR
TCCTCATTGACTGGTAACTT+GGG 0.539890 2_4:-44710737 None:intergenic
CTCACTTCGAGAGTAGTCTC+GGG 0.541421 2_4:-44706587 None:intergenic
GTGAAAATTTGACCGTTGGA+GGG 0.542397 2_4:-44705492 None:intergenic
TGGATTCGAGTCCAAAATGA+AGG 0.545592 2_4:+44709805 Msa0330380:three_prime_UTR
GTTGGAAATGGTAGTAGAAG+AGG 0.546160 2_4:+44710995 Msa0330380:three_prime_UTR
TCTGCCTCACCAGATAATGC+TGG 0.546645 2_4:+44706316 Msa0330380:CDS
TGAGTGTCAGAGAAAAGAGC+TGG 0.548345 2_4:+44706906 Msa0330380:three_prime_UTR
CTCTATGAATTCAGCTATGG+AGG 0.548795 2_4:+44705921 Msa0330380:CDS
ATCAAAATCTAAGGCCATTG+TGG 0.548969 2_4:-44707764 None:intergenic
GCATATTCCAGGGTTGGTTG+AGG 0.549002 2_4:+44708550 Msa0330380:three_prime_UTR
AACTGTGTTAAGCTTGGGAG+TGG 0.549586 2_4:-44710698 None:intergenic
ACTCACTTCGAGAGTAGTCT+CGG 0.552687 2_4:-44706588 None:intergenic
TAGCTCTATGAATTCAGCTA+TGG 0.552992 2_4:+44705918 Msa0330380:CDS
ACATGTGCCTCAACCAACCC+TGG 0.557788 2_4:-44708557 None:intergenic
CTCCTTGAAGTAGCTGCCGA+AGG 0.558466 2_4:-44710662 None:intergenic
GAGATAAGGCAAGCTGGTGA+AGG 0.559715 2_4:+44708524 Msa0330380:three_prime_UTR
CTTTGAGCTTCATCCACCGC+CGG 0.560466 2_4:+44706543 Msa0330380:CDS
CTCTCACTATGACCTTGTAA+TGG 0.565624 2_4:-44710785 None:intergenic
CACTTGCTGCAAGACTCGTT+AGG 0.566185 2_4:+44709268 Msa0330380:three_prime_UTR
GAAATTTGAAAGGTGATAAG+CGG 0.567335 2_4:-44705465 None:intergenic
CAAATTTCAAAACCCTCCAA+CGG 0.567534 2_4:+44705480 Msa0330380:five_prime_UTR
TAGAAGCAAGTTATGGCTTG+TGG 0.567710 2_4:+44708730 Msa0330380:three_prime_UTR
ATGTGAAATGGGAGAATGCA+TGG 0.567748 2_4:+44711191 Msa0330380:three_prime_UTR
AATAAGGTATTGGAGTTGAG+AGG 0.570281 2_4:+44707682 Msa0330380:three_prime_UTR
AGACTTGATGAGGAGATTGA+AGG 0.570449 2_4:+44707300 Msa0330380:three_prime_UTR
GATATTGTTGTAGGATGAAG+AGG 0.570814 2_4:+44706840 Msa0330380:intron
AACACACTAGAAGCAAGTTA+TGG 0.571120 2_4:+44708723 Msa0330380:three_prime_UTR
ACATTCGAGAATTTAACAGT+TGG 0.571634 2_4:-44706472 None:intergenic
AGTGTCTCAGGAGACAGAGT+TGG 0.572321 2_4:+44706732 Msa0330380:three_prime_UTR
AGGAATGCATATTCCAGGGT+TGG 0.574235 2_4:+44708544 Msa0330380:three_prime_UTR
ACTGGTAACTTGGGAATGAA+TGG 0.575657 2_4:-44710728 None:intergenic
GAAAGAAAACAATCCCGACT+TGG 0.581126 2_4:+44710568 Msa0330380:three_prime_UTR
AATCATCCTAACCATAACTA+GGG 0.584832 2_4:-44705972 None:intergenic
TTTCTCATGTGATGTTGTAG+TGG 0.585502 2_4:-44710890 None:intergenic
AAGCATCAGTTAGAAGAAGA+GGG 0.590332 2_4:-44705735 None:intergenic
ATCCAGGAATGTCTGCAAGA+AGG 0.591623 2_4:+44708243 Msa0330380:three_prime_UTR
GAAAAGAGCTGGCAGTAACA+AGG 0.592358 2_4:+44706917 Msa0330380:three_prime_UTR
TTGCAGCATTTGCTATTGAG+GGG 0.592991 2_4:+44707239 Msa0330380:intron
CGGCGGTGGATGAAGCTCAA+AGG 0.593614 2_4:-44706542 None:intergenic
TGGTGGTGTAAATGTAGGGA+TGG 0.593614 2_4:+44710916 Msa0330380:three_prime_UTR
GGAGTTAGGGGAGCTCAAGA+GGG 0.596229 2_4:+44706942 Msa0330380:three_prime_UTR
AAGATGGAGGAAACAATCCA+TGG 0.596697 2_4:+44709785 Msa0330380:three_prime_UTR
ATAGTCATAAGGACAAGGAA+AGG 0.598757 2_4:+44711047 Msa0330380:three_prime_UTR
ATGCGCAAGTCGATGCATGT+AGG 0.600630 2_4:+44707033 Msa0330380:three_prime_UTR
GGAAATGGTAGTAGAAGAGG+TGG 0.601554 2_4:+44710998 Msa0330380:three_prime_UTR
CTCAATGCCGAAGAGATGAA+AGG 0.601643 2_4:+44707736 Msa0330380:three_prime_UTR
TAAACAAGAGCTAAAACTGA+AGG 0.602054 2_4:+44709748 Msa0330380:three_prime_UTR
GAGGGAAATTGGCACAAAGG+GGG 0.603010 2_4:+44710966 Msa0330380:three_prime_UTR
AACAGTCAACTCTAGAGATG+TGG 0.603353 2_4:-44711278 None:intergenic
AACTGTTCACAACCATTACA+AGG 0.603512 2_4:+44710773 Msa0330380:three_prime_UTR
AGGGAAATTGGCACAAAGGG+GGG 0.606120 2_4:+44710967 Msa0330380:three_prime_UTR
GCAGCAGATCCTCAATCTTG+TGG 0.607072 2_4:+44705943 Msa0330380:CDS
ATTGTATCCATCTAAAACTG+AGG 0.609343 2_4:-44708012 None:intergenic
CATTTGTAAATTCTGCATGT+GGG 0.611133 2_4:+44711221 Msa0330380:three_prime_UTR
ATAAGGACAAGGAAAGGGCA+TGG 0.611539 2_4:+44711053 Msa0330380:three_prime_UTR
AGTAACAAGGAGGGAGTTAG+GGG 0.612201 2_4:+44706930 Msa0330380:three_prime_UTR
CGGCATTGAGAGGCCTACAC+CGG 0.613881 2_4:-44707723 None:intergenic
ACAAACTGGCAGCAATGCAA+GGG 0.615866 2_4:+44708610 Msa0330380:three_prime_UTR
CATCACTGAGAGACTTGATG+AGG 0.620174 2_4:+44707290 Msa0330380:three_prime_UTR
TTGTAATGGTTGTGAACAGT+TGG 0.620446 2_4:-44710771 None:intergenic
TATAATCAAGGAAAGACAGA+AGG 0.621755 2_4:+44708142 Msa0330380:three_prime_UTR
AGATTGGAGATAAGGCAAGC+TGG 0.627297 2_4:+44708518 Msa0330380:intron
AAGTTGGTGGTGTAAATGTA+GGG 0.627984 2_4:+44710912 Msa0330380:three_prime_UTR
GATGAAAGGAGGAGCCACAA+TGG 0.629566 2_4:+44707750 Msa0330380:three_prime_UTR
GAGTCTCTATTGGAAGTAGA+GGG 0.632970 2_4:+44710948 Msa0330380:three_prime_UTR
TCCCAAGTTACCAGTCAATG+AGG 0.633984 2_4:+44710736 Msa0330380:three_prime_UTR
ACTTCTGAAACACAAACAGA+TGG 0.634747 2_4:+44709546 Msa0330380:three_prime_UTR
AGTCCAAAAGAAATTAAAAG+CGG 0.635983 2_4:+44710806 Msa0330380:three_prime_UTR
GTAGAGGGAAATTGGCACAA+AGG 0.638283 2_4:+44710963 Msa0330380:three_prime_UTR
CAAGAATAGTCATAAGGACA+AGG 0.638893 2_4:+44711042 Msa0330380:three_prime_UTR
AAGAGCTGGCAGTAACAAGG+AGG 0.640107 2_4:+44706920 Msa0330380:three_prime_UTR
GTGAAGGAATGCATATTCCA+GGG 0.643999 2_4:+44708540 Msa0330380:three_prime_UTR
GCACTGCATTCACTGTGTCA+TGG 0.646179 2_4:+44708673 Msa0330380:three_prime_UTR
TGAACAATATGACTGAAGTG+TGG 0.646399 2_4:+44708579 Msa0330380:three_prime_UTR
TTTGGCCCTCAAGTTGAACA+AGG 0.649280 2_4:+44707859 Msa0330380:three_prime_UTR
GTGTCAGACTATTGAACCAG+AGG 0.650917 2_4:+44706495 Msa0330380:CDS
CTTTCAAATCAAGAAGATGG+AGG 0.653277 2_4:+44709772 Msa0330380:three_prime_UTR
GTTGCAAAGACAGAAGTGCA+AGG 0.657894 2_4:+44708773 Msa0330380:three_prime_UTR
AGAGGGAAATTGGCACAAAG+GGG 0.661443 2_4:+44710965 Msa0330380:three_prime_UTR
CATCACATGAGAAAAGTTGG+TGG 0.661993 2_4:+44710899 Msa0330380:three_prime_UTR
GAACAATATGACTGAAGTGT+GGG 0.664422 2_4:+44708580 Msa0330380:three_prime_UTR
GCAGATCCTCAATCTTGTGG+AGG 0.664824 2_4:+44705946 Msa0330380:CDS
AGAGTAAGGGGAATAGAACT+GGG 0.669516 2_4:+44709493 Msa0330380:three_prime_UTR
AGAGCTGGCAGTAACAAGGA+GGG 0.669867 2_4:+44706921 Msa0330380:three_prime_UTR
ATTTGTAAATTCTGCATGTG+GGG 0.671141 2_4:+44711222 Msa0330380:three_prime_UTR
ACAGATCACCAAATCTGGTG+AGG 0.671267 2_4:-44706293 None:intergenic
GAGGGCACAGAAGAGTCTCG+AGG 0.671511 2_4:+44708086 Msa0330380:three_prime_UTR
GATTCCAGCATTATCTGGTG+AGG 0.674681 2_4:-44706320 None:intergenic
GTAGGATGAAGAGGATGTTG+GGG 0.675110 2_4:+44706849 Msa0330380:intron
GTAGCTGCCGAAGGAATGCG+CGG 0.680336 2_4:-44710653 None:intergenic
TCGTCGTCTTTAGTTACCGG+CGG 0.690797 2_4:-44706559 None:intergenic
AATGCCGAAGAGATGAAAGG+AGG 0.693896 2_4:+44707739 Msa0330380:three_prime_UTR
TCACTTCGAGAGTAGTCTCG+GGG 0.707816 2_4:-44706586 None:intergenic
AAGTGAAAGAGAAAAGCAAG+TGG 0.718795 2_4:+44707263 Msa0330380:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAGTAATTACAATTAA+AGG + chr2_4:44707113-44707132 Msa0330380:intron 10.0%
!! TAAAAGTAATTACAATTAAA+GGG + chr2_4:44707114-44707133 Msa0330380:intron 10.0%
!!! AAATTTTTAAGAGATTAATT+TGG + chr2_4:44708302-44708321 Msa0330380:intron 10.0%
!! AATGATGATTAATCAATAAA+GGG - chr2_4:44705616-44705635 None:intergenic 15.0%
!! TAAATGAAATTAAACCAAAA+GGG - chr2_4:44705878-44705897 None:intergenic 15.0%
!!! GTAAATTTTTAATTTTGTTC+TGG + chr2_4:44706174-44706193 Msa0330380:intron 15.0%
!! TTTCATAATAGTAACTAAAA+AGG + chr2_4:44708486-44708505 Msa0330380:intron 15.0%
!! TTCATAATAGTAACTAAAAA+GGG + chr2_4:44708487-44708506 Msa0330380:intron 15.0%
!! TTTATGATTGAAAAATAGAA+AGG - chr2_4:44708906-44708925 None:intergenic 15.0%
!!! CATATTTTCATAACTTATTT+AGG + chr2_4:44709038-44709057 Msa0330380:intron 15.0%
!! TAAAATTGTTTATCCAAATA+GGG - chr2_4:44709880-44709899 None:intergenic 15.0%
!! ATAAAATTGTTTATCCAAAT+AGG - chr2_4:44709881-44709900 None:intergenic 15.0%
!!! CTATTTCTATTATCATATAA+GGG + chr2_4:44709949-44709968 Msa0330380:intron 15.0%
!!! CAAATTTTTAGAAATTTGTA+AGG - chr2_4:44710279-44710298 None:intergenic 15.0%
!!! TATGAAATGGAATTTGATTT+TGG - chr2_4:44705529-44705548 None:intergenic 20.0%
!! CAATGATGATTAATCAATAA+AGG - chr2_4:44705617-44705636 None:intergenic 20.0%
!!! TGTGACTATTATTTTATCAA+TGG + chr2_4:44705681-44705700 Msa0330380:exon 20.0%
!!! ATTTTGATTAAACCCTAAAA+GGG - chr2_4:44705809-44705828 None:intergenic 20.0%
!!! AATTTTGATTAAACCCTAAA+AGG - chr2_4:44705810-44705829 None:intergenic 20.0%
!! CTAAATGAAATTAAACCAAA+AGG - chr2_4:44705879-44705898 None:intergenic 20.0%
!!! CTTTTGGTTTAATTTCATTT+AGG + chr2_4:44705877-44705896 Msa0330380:intron 20.0%
!!! TTGTTATGATTTTTGTGTTT+CGG + chr2_4:44706065-44706084 Msa0330380:intron 20.0%
!! GTAAAAAATCCATATACAAA+AGG + chr2_4:44707185-44707204 Msa0330380:intron 20.0%
!!! TAAACATAACCTTTTGTATA+TGG - chr2_4:44707197-44707216 None:intergenic 20.0%
!!! AATGTGTTTGTTAATTTCAT+TGG + chr2_4:44707378-44707397 Msa0330380:intron 20.0%
!! CTTAAGTCCAAATATATTAA+AGG + chr2_4:44707634-44707653 Msa0330380:three_prime_UTR 20.0%
!!! TCAAAAAGAGCTTTATAATA+AGG + chr2_4:44707666-44707685 Msa0330380:three_prime_UTR 20.0%
!!! TCAAATTTAAAAGTCCTTTT+TGG - chr2_4:44707832-44707851 None:intergenic 20.0%
!! GAAAATGTTTGATATAATCA+AGG + chr2_4:44708130-44708149 Msa0330380:three_prime_UTR 20.0%
!!! AAACCATTTAGTTATTTTCA+AGG + chr2_4:44708279-44708298 Msa0330380:intron 20.0%
!! TTTCCTTGAAAATAACTAAA+TGG - chr2_4:44708285-44708304 None:intergenic 20.0%
!!! ATTAATTTGGATGACTTTTA+AGG + chr2_4:44708315-44708334 Msa0330380:intron 20.0%
!! AATATGTTTAGTATTCCTAA+CGG + chr2_4:44708357-44708376 Msa0330380:intron 20.0%
!!! ATAGTTTTTCCATTGAAAAT+TGG - chr2_4:44708440-44708459 None:intergenic 20.0%
!! ATATTGTTAGGATAGAATAA+TGG + chr2_4:44709619-44709638 Msa0330380:intron 20.0%
!!! TTTGGATAAACAATTTTATC+AGG + chr2_4:44709882-44709901 Msa0330380:intron 20.0%
!!! GCTATTTCTATTATCATATA+AGG + chr2_4:44709948-44709967 Msa0330380:intron 20.0%
!!! AAAGAATATTGTGCTTTATT+TGG - chr2_4:44710183-44710202 None:intergenic 20.0%
!! GTAAGTTGTAATAATTTACA+AGG - chr2_4:44710214-44710233 None:intergenic 20.0%
!!! ACAAATTTCTAAAAATTTGC+AGG + chr2_4:44710280-44710299 Msa0330380:intron 20.0%
!!! ATTTCTTGTGTGTTTTTTTA+AGG + chr2_4:44711144-44711163 Msa0330380:three_prime_UTR 20.0%
! TTTGGATAAAACCAAGTTAA+TGG - chr2_4:44705406-44705425 None:intergenic 25.0%
!! TTCAGTTTTCAAAGTTCAAA+CGG + chr2_4:44705656-44705675 Msa0330380:five_prime_UTR 25.0%
!!! TTTTGATTAAACCCTAAAAG+GGG - chr2_4:44705808-44705827 None:intergenic 25.0%
! CCATCAAAATTAAGAAAATG+GGG - chr2_4:44706044-44706063 None:intergenic 25.0%
! CCCATCAAAATTAAGAAAAT+GGG - chr2_4:44706045-44706064 None:intergenic 25.0%
!!! CCCATTTTCTTAATTTTGAT+GGG + chr2_4:44706042-44706061 Msa0330380:intron 25.0%
! ACCCATCAAAATTAAGAAAA+TGG - chr2_4:44706046-44706065 None:intergenic 25.0%
! GTAGAATTGTGTATGAAAAA+TGG + chr2_4:44706089-44706108 Msa0330380:intron 25.0%
!!! TAAAGATCTGATTTTGTTTC+AGG + chr2_4:44706244-44706263 Msa0330380:intron 25.0%
! TTGTTCTTCTTAAACAATTC+AGG - chr2_4:44706361-44706380 None:intergenic 25.0%
! GAACAAAAATTGCTACAATT+TGG + chr2_4:44706375-44706394 Msa0330380:CDS 25.0%
!!! GTGAATATTAGCTTTACATA+AGG + chr2_4:44706633-44706652 Msa0330380:three_prime_UTR 25.0%
! TTTGTTTGTAAGTAGCAATT+TGG - chr2_4:44706666-44706685 None:intergenic 25.0%
!! TATGTTTCTGTAATGAACAT+TGG + chr2_4:44706767-44706786 Msa0330380:intron 25.0%
!! GTAATTTTCTTACTTCGATA+AGG + chr2_4:44706789-44706808 Msa0330380:intron 25.0%
! ATTCTCAATGATATTGTTGT+AGG + chr2_4:44706831-44706850 Msa0330380:intron 25.0%
!!! TACTTTTAAAGTCACACATT+TGG - chr2_4:44707102-44707121 None:intergenic 25.0%
!!! TTTTAAGTACACATGCAAAA+GGG - chr2_4:44707560-44707579 None:intergenic 25.0%
! TGTTCATTCACTACAAAAAA+TGG - chr2_4:44707595-44707614 None:intergenic 25.0%
! CTTAGCACCTTTAATATATT+TGG - chr2_4:44707644-44707663 None:intergenic 25.0%
!!! CAAATATATTAAAGGTGCTA+AGG + chr2_4:44707642-44707661 Msa0330380:three_prime_UTR 25.0%
!! AGAGCTTTATAATAAGGTAT+TGG + chr2_4:44707672-44707691 Msa0330380:three_prime_UTR 25.0%
! TTTAGCAGAATCAAAATCTA+AGG - chr2_4:44707776-44707795 None:intergenic 25.0%
! TTTAAATTTGATGCTGTCTT+TGG + chr2_4:44707841-44707860 Msa0330380:three_prime_UTR 25.0%
! ATTAAGCATTAATGCCATAA+AGG + chr2_4:44707884-44707903 Msa0330380:intron 25.0%
! AATTCAGAACCAAAGTTAAA+AGG - chr2_4:44707911-44707930 None:intergenic 25.0%
!! AATGTATGCATTTTTGCATA+TGG + chr2_4:44708032-44708051 Msa0330380:three_prime_UTR 25.0%
!! CAATTAAGTCCAATTTTCAA+TGG + chr2_4:44708428-44708447 Msa0330380:intron 25.0%
! AAAAAGGGTTAATTGTAGAT+TGG + chr2_4:44708502-44708521 Msa0330380:intron 25.0%
! TTAATTGTAGATTGGAGATA+AGG + chr2_4:44708510-44708529 Msa0330380:intron 25.0%
! GATTATATTGTTCATTATGC+AGG + chr2_4:44709230-44709249 Msa0330380:intron 25.0%
!! ATGTTCATTGATTAAGCAAA+TGG - chr2_4:44709305-44709324 None:intergenic 25.0%
!!! GATGAACAATCTTTTTTTCT+AGG + chr2_4:44709382-44709401 Msa0330380:intron 25.0%
! TTCTTAACTGTGATATTGTT+AGG + chr2_4:44709607-44709626 Msa0330380:intron 25.0%
! AAACAAAACTCTTCAAGATA+AGG + chr2_4:44709841-44709860 Msa0330380:three_prime_UTR 25.0%
! TATCATAATAAGTCCCTATT+TGG + chr2_4:44709864-44709883 Msa0330380:intron 25.0%
!!! CTTATTTCTATAAGCTATCT+AGG - chr2_4:44710061-44710080 None:intergenic 25.0%
! ATTTATTTGAGCTTATCTAC+AGG - chr2_4:44710156-44710175 None:intergenic 25.0%
! ATTATTACAACTTACGAATG+AGG + chr2_4:44710219-44710238 Msa0330380:intron 25.0%
! TTATTACAACTTACGAATGA+GGG + chr2_4:44710220-44710239 Msa0330380:intron 25.0%
!! TTTAAGATGTTCTCCATTAA+GGG - chr2_4:44710488-44710507 None:intergenic 25.0%
!!! TTTTAAGATGTTCTCCATTA+AGG - chr2_4:44710489-44710508 None:intergenic 25.0%
! AGTCCAAAAGAAATTAAAAG+CGG + chr2_4:44710806-44710825 Msa0330380:three_prime_UTR 25.0%
!!! ATCTCATTTTTCATGTGAAA+TGG + chr2_4:44711179-44711198 Msa0330380:three_prime_UTR 25.0%
!!! TCTCATTTTTCATGTGAAAT+GGG + chr2_4:44711180-44711199 Msa0330380:three_prime_UTR 25.0%
AAATTTGAAAGGTGATAAGC+GGG - chr2_4:44705467-44705486 None:intergenic 30.0%
GAAATTTGAAAGGTGATAAG+CGG - chr2_4:44705468-44705487 None:intergenic 30.0%
!! GAGAAAGTTTTGCTATGAAA+TGG - chr2_4:44705542-44705561 None:intergenic 30.0%
! TCAGTTTTCAAAGTTCAAAC+GGG + chr2_4:44705657-44705676 Msa0330380:five_prime_UTR 30.0%
AATCATCCTAACCATAACTA+GGG - chr2_4:44705975-44705994 None:intergenic 30.0%
AAATCATCCTAACCATAACT+AGG - chr2_4:44705976-44705995 None:intergenic 30.0%
! CCCCATTTTCTTAATTTTGA+TGG + chr2_4:44706041-44706060 Msa0330380:intron 30.0%
! CAACCAAATTTTTCACAACT+GGG - chr2_4:44706148-44706167 None:intergenic 30.0%
! TCAACCAAATTTTTCACAAC+TGG - chr2_4:44706149-44706168 None:intergenic 30.0%
!! GTGAAAAATTTGGTTGATGA+TGG + chr2_4:44706152-44706171 Msa0330380:CDS 30.0%
CTACAATTTGGATTCATCTA+TGG + chr2_4:44706387-44706406 Msa0330380:CDS 30.0%
ACATTGTAAACTTCAACTTC+AGG - chr2_4:44706442-44706461 None:intergenic 30.0%
ATTTAACAGTTGGAGTCTTA+TGG - chr2_4:44706465-44706484 None:intergenic 30.0%
ACATTCGAGAATTTAACAGT+TGG - chr2_4:44706475-44706494 None:intergenic 30.0%
! TTTAAAGTCACACATTTGGT+TGG - chr2_4:44707098-44707117 None:intergenic 30.0%
ATGCTGCAAAAAAATATCAG+TGG - chr2_4:44707228-44707247 None:intergenic 30.0%
!!! ACATTCACTCAAGTTTTGTT+AGG - chr2_4:44707334-44707353 None:intergenic 30.0%
CATTGGACAGATTATGAAAA+TGG + chr2_4:44707395-44707414 Msa0330380:intron 30.0%
TGAAGCAGATATAAGTGAAA+TGG + chr2_4:44707461-44707480 Msa0330380:three_prime_UTR 30.0%
GAAGCAGATATAAGTGAAAT+GGG + chr2_4:44707462-44707481 Msa0330380:three_prime_UTR 30.0%
!! GTTTTAAGTACACATGCAAA+AGG - chr2_4:44707561-44707580 None:intergenic 30.0%
!!! GATTTTGATTCTGCTAAAGA+TGG + chr2_4:44707778-44707797 Msa0330380:three_prime_UTR 30.0%
AATTACCTTGTTCAACTTGA+GGG - chr2_4:44707867-44707886 None:intergenic 30.0%
TAATTACCTTGTTCAACTTG+AGG - chr2_4:44707868-44707887 None:intergenic 30.0%
CAAAGTTAAAAGGACCTTTA+TGG - chr2_4:44707901-44707920 None:intergenic 30.0%
!!! CATAAAGGTCCTTTTAACTT+TGG + chr2_4:44707899-44707918 Msa0330380:intron 30.0%
! ATTGTATCCATCTAAAACTG+AGG - chr2_4:44708015-44708034 None:intergenic 30.0%
! ATTTTTGCATATGGACAAAC+TGG + chr2_4:44708041-44708060 Msa0330380:three_prime_UTR 30.0%
TATAATCAAGGAAAGACAGA+AGG + chr2_4:44708142-44708161 Msa0330380:three_prime_UTR 30.0%
TAATTGATATGCACTGAAAG+TGG - chr2_4:44708414-44708433 None:intergenic 30.0%
GGAAAAACTATACTTTAGCT+TGG + chr2_4:44708449-44708468 Msa0330380:intron 30.0%
!! AAGGGAGAAAATTTGTTGAA+TGG + chr2_4:44708698-44708717 Msa0330380:three_prime_UTR 30.0%
AGGAGACGCAAAATATTAAT+AGG + chr2_4:44708807-44708826 Msa0330380:three_prime_UTR 30.0%
GAAAGGATAATAACCTGAAA+GGG - chr2_4:44708889-44708908 None:intergenic 30.0%
AGAAAGGATAATAACCTGAA+AGG - chr2_4:44708890-44708909 None:intergenic 30.0%
! ACTGTTTTCACATAAGCTAT+AGG - chr2_4:44709081-44709100 None:intergenic 30.0%
!!! GAACAATCTTTTTTTCTAGG+AGG + chr2_4:44709385-44709404 Msa0330380:intron 30.0%
AGTCCTAATGAAAACGATTT+GGG + chr2_4:44709439-44709458 Msa0330380:three_prime_UTR 30.0%
! TGAATTTTGCTAGTAGAGTA+AGG + chr2_4:44709479-44709498 Msa0330380:three_prime_UTR 30.0%
! GAATTTTGCTAGTAGAGTAA+GGG + chr2_4:44709480-44709499 Msa0330380:three_prime_UTR 30.0%
! AATTTTGCTAGTAGAGTAAG+GGG + chr2_4:44709481-44709500 Msa0330380:three_prime_UTR 30.0%
TAAACAAGAGCTAAAACTGA+AGG + chr2_4:44709748-44709767 Msa0330380:three_prime_UTR 30.0%
! ATGATCCTTTTCCTTCATTT+TGG - chr2_4:44709819-44709838 None:intergenic 30.0%
CATAAGCGCTTATCATATAA+GGG + chr2_4:44709914-44709933 Msa0330380:intron 30.0%
AATAAGCTTAAAGCAGCATA+TGG + chr2_4:44710075-44710094 Msa0330380:intron 30.0%
! TTCTAAAAATTTGCAGGTGA+AGG + chr2_4:44710286-44710305 Msa0330380:intron 30.0%
AAATTCTTGAGAGTTGCTAA+TGG - chr2_4:44710449-44710468 None:intergenic 30.0%
GAGCTTTCTATTGTAGAAAA+GGG - chr2_4:44710524-44710543 None:intergenic 30.0%
TAAATCGCTACTTCCAAAAA+AGG + chr2_4:44710598-44710617 Msa0330380:three_prime_UTR 30.0%
! TTTGAAACTGTGTTAAGCTT+GGG - chr2_4:44710706-44710725 None:intergenic 30.0%
!!! ACACCGCTTTTAATTTCTTT+TGG - chr2_4:44710812-44710831 None:intergenic 30.0%
! AGAAGAAGCATACATAAGAA+AGG + chr2_4:44710854-44710873 Msa0330380:three_prime_UTR 30.0%
TACATAAGAAAGGTCAAGTT+AGG + chr2_4:44710864-44710883 Msa0330380:three_prime_UTR 30.0%
TCAACACAAGAATAGTCATA+AGG + chr2_4:44711036-44711055 Msa0330380:three_prime_UTR 30.0%
!!! TCATTTTTTTCTGCAATGTG+TGG + chr2_4:44711108-44711127 Msa0330380:three_prime_UTR 30.0%
TCATTTGTAAATTCTGCATG+TGG + chr2_4:44711220-44711239 Msa0330380:three_prime_UTR 30.0%
CATTTGTAAATTCTGCATGT+GGG + chr2_4:44711221-44711240 Msa0330380:three_prime_UTR 30.0%
ATTTGTAAATTCTGCATGTG+GGG + chr2_4:44711222-44711241 Msa0330380:three_prime_UTR 30.0%
TTTGCATATGCTTTGTGCAT+TGG - chr2_4:44705437-44705456 None:intergenic 35.0%
!!! GGAGGGTTTTGAAATTTGAA+AGG - chr2_4:44705478-44705497 None:intergenic 35.0%
CAAATTTCAAAACCCTCCAA+CGG + chr2_4:44705480-44705499 Msa0330380:five_prime_UTR 35.0%
!! GTTGTGTATGCTTTTTGAGA+AGG - chr2_4:44705594-44705613 None:intergenic 35.0%
AAGCATCAGTTAGAAGAAGA+GGG - chr2_4:44705738-44705757 None:intergenic 35.0%
! AAGATCCTTTAACCCCTTTT+AGG + chr2_4:44705793-44705812 Msa0330380:intron 35.0%
! AGATCCTTTAACCCCTTTTA+GGG + chr2_4:44705794-44705813 Msa0330380:intron 35.0%
TAAACCCTAAAAGGGGTTAA+AGG - chr2_4:44705801-44705820 None:intergenic 35.0%
! ATCAAATTCGTTGACCCTTT+TGG + chr2_4:44705861-44705880 Msa0330380:intron 35.0%
! TAGCTCTATGAATTCAGCTA+TGG + chr2_4:44705918-44705937 Msa0330380:CDS 35.0%
GTGTATGAAAAATGGAAGCT+TGG + chr2_4:44706097-44706116 Msa0330380:CDS 35.0%
TGAAAAATGGAAGCTTGGAA+AGG + chr2_4:44706102-44706121 Msa0330380:CDS 35.0%
TGACCCAGTTGTGAAAAATT+TGG + chr2_4:44706142-44706161 Msa0330380:CDS 35.0%
!! GATCTGATTTTGTTTCAGGA+CGG + chr2_4:44706248-44706267 Msa0330380:intron 35.0%
! TAACTGATTCCAGCATTATC+TGG - chr2_4:44706328-44706347 None:intergenic 35.0%
GACGATGAAATGTTAGAAGA+TGG + chr2_4:44706706-44706725 Msa0330380:three_prime_UTR 35.0%
GATATTGTTGTAGGATGAAG+AGG + chr2_4:44706840-44706859 Msa0330380:intron 35.0%
!!! TTTTGCAGCATTTGCTATTG+AGG + chr2_4:44707237-44707256 Msa0330380:intron 35.0%
!! TTTGCAGCATTTGCTATTGA+GGG + chr2_4:44707238-44707257 Msa0330380:intron 35.0%
AAGTGAAAGAGAAAAGCAAG+TGG + chr2_4:44707263-44707282 Msa0330380:three_prime_UTR 35.0%
!! AATAAGGTATTGGAGTTGAG+AGG + chr2_4:44707682-44707701 Msa0330380:three_prime_UTR 35.0%
! ATCAAAATCTAAGGCCATTG+TGG - chr2_4:44707767-44707786 None:intergenic 35.0%
TGTCAAATGGATCTCCAAAA+AGG + chr2_4:44707815-44707834 Msa0330380:three_prime_UTR 35.0%
CTTTATAGCTGATATCTTCG+AGG + chr2_4:44707971-44707990 Msa0330380:intron 35.0%
! TCTAAAACTGAGGTTGCAAA+TGG - chr2_4:44708005-44708024 None:intergenic 35.0%
!!! TTTGCAACCTCAGTTTTAGA+TGG + chr2_4:44708005-44708024 Msa0330380:three_prime_UTR 35.0%
!! GTACACTTCTAAGACACTTA+CGG - chr2_4:44708186-44708205 None:intergenic 35.0%
TGAGCAAATAAGAGATTTGC+TGG + chr2_4:44708208-44708227 Msa0330380:three_prime_UTR 35.0%
!! ATAAGAGATTTGCTGGTTTC+AGG + chr2_4:44708215-44708234 Msa0330380:three_prime_UTR 35.0%
!! TAAGAGATTTGCTGGTTTCA+GGG + chr2_4:44708216-44708235 Msa0330380:three_prime_UTR 35.0%
GTCAATCAATCATAACCGTT+AGG - chr2_4:44708375-44708394 None:intergenic 35.0%
TGAACAATATGACTGAAGTG+TGG + chr2_4:44708579-44708598 Msa0330380:three_prime_UTR 35.0%
GAACAATATGACTGAAGTGT+GGG + chr2_4:44708580-44708599 Msa0330380:three_prime_UTR 35.0%
ATTCACTGTGTCATGGTTAA+GGG + chr2_4:44708680-44708699 Msa0330380:three_prime_UTR 35.0%
AACACACTAGAAGCAAGTTA+TGG + chr2_4:44708723-44708742 Msa0330380:three_prime_UTR 35.0%
CAGTCCTAATGAAAACGATT+TGG + chr2_4:44709438-44709457 Msa0330380:three_prime_UTR 35.0%
!! ACTTCTGAAACACAAACAGA+TGG + chr2_4:44709546-44709565 Msa0330380:three_prime_UTR 35.0%
CCTACTTTAACTACTCTTGT+TGG - chr2_4:44709645-44709664 None:intergenic 35.0%
CCAACAAGAGTAGTTAAAGT+AGG + chr2_4:44709642-44709661 Msa0330380:intron 35.0%
!! GATGTTCTCTCTTGTTGTTT+AGG + chr2_4:44709715-44709734 Msa0330380:intron 35.0%
GGACTTTCAAATCAAGAAGA+TGG + chr2_4:44709769-44709788 Msa0330380:three_prime_UTR 35.0%
CTTTCAAATCAAGAAGATGG+AGG + chr2_4:44709772-44709791 Msa0330380:three_prime_UTR 35.0%
GCATAAGCGCTTATCATATA+AGG + chr2_4:44709913-44709932 Msa0330380:intron 35.0%
! GTAGAAAAGGGTATACTGTA+AGG - chr2_4:44710512-44710531 None:intergenic 35.0%
GGAGCTTTCTATTGTAGAAA+AGG - chr2_4:44710525-44710544 None:intergenic 35.0%
ATTGTGATCAATGCACTTGA+TGG - chr2_4:44710546-44710565 None:intergenic 35.0%
GATTTATTATCAGCCAAGTC+GGG - chr2_4:44710584-44710603 None:intergenic 35.0%
CGATTTATTATCAGCCAAGT+CGG - chr2_4:44710585-44710604 None:intergenic 35.0%
! GTTTGAAACTGTGTTAAGCT+TGG - chr2_4:44710707-44710726 None:intergenic 35.0%
TTGTAATGGTTGTGAACAGT+TGG - chr2_4:44710774-44710793 None:intergenic 35.0%
AACTGTTCACAACCATTACA+AGG + chr2_4:44710773-44710792 Msa0330380:three_prime_UTR 35.0%
! AAAAGCGGTGTTAAGAAGAT+AGG + chr2_4:44710821-44710840 Msa0330380:three_prime_UTR 35.0%
TTTCTCATGTGATGTTGTAG+TGG - chr2_4:44710893-44710912 None:intergenic 35.0%
CAACATCACATGAGAAAAGT+TGG + chr2_4:44710896-44710915 Msa0330380:three_prime_UTR 35.0%
!! AAAGTTGGTGGTGTAAATGT+AGG + chr2_4:44710911-44710930 Msa0330380:three_prime_UTR 35.0%
!! AAGTTGGTGGTGTAAATGTA+GGG + chr2_4:44710912-44710931 Msa0330380:three_prime_UTR 35.0%
TATTGGAAGTAGAGGGAAAT+TGG + chr2_4:44710955-44710974 Msa0330380:three_prime_UTR 35.0%
CAAGAATAGTCATAAGGACA+AGG + chr2_4:44711042-44711061 Msa0330380:three_prime_UTR 35.0%
ATAGTCATAAGGACAAGGAA+AGG + chr2_4:44711047-44711066 Msa0330380:three_prime_UTR 35.0%
TAGTCATAAGGACAAGGAAA+GGG + chr2_4:44711048-44711067 Msa0330380:three_prime_UTR 35.0%
TGTGCATTGGATTCTGACTT+TGG - chr2_4:44705424-44705443 None:intergenic 40.0%
GTGAAAATTTGACCGTTGGA+GGG - chr2_4:44705495-44705514 None:intergenic 40.0%
TGTGAAAATTTGACCGTTGG+AGG - chr2_4:44705496-44705515 None:intergenic 40.0%
CCTTGTGAAAATTTGACCGT+TGG - chr2_4:44705499-44705518 None:intergenic 40.0%
! CCAACGGTCAAATTTTCACA+AGG + chr2_4:44705496-44705515 Msa0330380:five_prime_UTR 40.0%
! GAAGCATCAGTTAGAAGAAG+AGG - chr2_4:44705739-44705758 None:intergenic 40.0%
AAGGATCTTACTAGTGGAAG+TGG - chr2_4:44705782-44705801 None:intergenic 40.0%
GGGTTAAAGGATCTTACTAG+TGG - chr2_4:44705788-44705807 None:intergenic 40.0%
CTCTATGAATTCAGCTATGG+AGG + chr2_4:44705921-44705940 Msa0330380:CDS 40.0%
AGGAAACCCTAGTTATGGTT+AGG + chr2_4:44705966-44705985 Msa0330380:intron 40.0%
TTTCAGGACGGTCGATATTA+GGG + chr2_4:44706260-44706279 Msa0330380:intron 40.0%
TCTCTCGAGAATGGTATCAA+TGG + chr2_4:44706415-44706434 Msa0330380:CDS 40.0%
TTGTAGGATGAAGAGGATGT+TGG + chr2_4:44706847-44706866 Msa0330380:intron 40.0%
TGTAGGATGAAGAGGATGTT+GGG + chr2_4:44706848-44706867 Msa0330380:intron 40.0%
!! CTCATTCTGAAGCTCGTTTA+AGG - chr2_4:44707010-44707029 None:intergenic 40.0%
TCGATGCATGTAGGATCTTT+AGG + chr2_4:44707042-44707061 Msa0330380:three_prime_UTR 40.0%
!! TTGCAGCATTTGCTATTGAG+GGG + chr2_4:44707239-44707258 Msa0330380:intron 40.0%
AGACTTGATGAGGAGATTGA+AGG + chr2_4:44707300-44707319 Msa0330380:three_prime_UTR 40.0%
GGAACACATGAAGCTATTAG+AGG + chr2_4:44707416-44707435 Msa0330380:three_prime_UTR 40.0%
TGGAGTTGAGAGGAAACATA+AGG + chr2_4:44707692-44707711 Msa0330380:three_prime_UTR 40.0%
GGAGTTGAGAGGAAACATAA+GGG + chr2_4:44707693-44707712 Msa0330380:three_prime_UTR 40.0%
! GAAACATAAGGGTCTTTTGC+CGG + chr2_4:44707704-44707723 Msa0330380:three_prime_UTR 40.0%
GAGCTTACTGTACTGTCAAA+TGG + chr2_4:44707802-44707821 Msa0330380:three_prime_UTR 40.0%
TACCGGAAAAACCTTCACAA+TGG + chr2_4:44708064-44708083 Msa0330380:three_prime_UTR 40.0%
! CTCCATTGTGAAGGTTTTTC+CGG - chr2_4:44708069-44708088 None:intergenic 40.0%
GGAAAAACCTTCACAATGGA+GGG + chr2_4:44708068-44708087 Msa0330380:three_prime_UTR 40.0%
AGTCTCGAGGAGTTAATTTC+AGG + chr2_4:44708099-44708118 Msa0330380:three_prime_UTR 40.0%
GTGAAGGAATGCATATTCCA+GGG + chr2_4:44708540-44708559 Msa0330380:three_prime_UTR 40.0%
CATTCACTGTGTCATGGTTA+AGG + chr2_4:44708679-44708698 Msa0330380:three_prime_UTR 40.0%
TAGAAGCAAGTTATGGCTTG+TGG + chr2_4:44708730-44708749 Msa0330380:three_prime_UTR 40.0%
AGTGCAAGGTGATAGATTGA+AGG + chr2_4:44708787-44708806 Msa0330380:three_prime_UTR 40.0%
AATAGGTCTCTTTCTGCACT+TGG + chr2_4:44708824-44708843 Msa0330380:three_prime_UTR 40.0%
AAAGTTCACACATCCCTTTC+AGG + chr2_4:44708873-44708892 Msa0330380:three_prime_UTR 40.0%
TAAGCACCTGTGAGATTGTT+TGG + chr2_4:44708968-44708987 Msa0330380:intron 40.0%
AAGCACCTGTGAGATTGTTT+GGG + chr2_4:44708969-44708988 Msa0330380:intron 40.0%
! TCGCCCAAATCGTTTTCATT+AGG - chr2_4:44709445-44709464 None:intergenic 40.0%
TAGAGTAAGGGGAATAGAAC+TGG + chr2_4:44709492-44709511 Msa0330380:three_prime_UTR 40.0%
AGAGTAAGGGGAATAGAACT+GGG + chr2_4:44709493-44709512 Msa0330380:three_prime_UTR 40.0%
AAGATGGAGGAAACAATCCA+TGG + chr2_4:44709785-44709804 Msa0330380:three_prime_UTR 40.0%
! TCATTTTGGACTCGAATCCA+TGG - chr2_4:44709805-44709824 None:intergenic 40.0%
TGGATTCGAGTCCAAAATGA+AGG + chr2_4:44709805-44709824 Msa0330380:three_prime_UTR 40.0%
CGAGTCCAAAATGAAGGAAA+AGG + chr2_4:44709811-44709830 Msa0330380:three_prime_UTR 40.0%
TAAACACTTGTGGGGCTATT+TGG - chr2_4:44710131-44710150 None:intergenic 40.0%
TACAGGCATAAACACTTGTG+GGG - chr2_4:44710139-44710158 None:intergenic 40.0%
CTACAGGCATAAACACTTGT+GGG - chr2_4:44710140-44710159 None:intergenic 40.0%
TCTACAGGCATAAACACTTG+TGG - chr2_4:44710141-44710160 None:intergenic 40.0%
TGATGCAGCAAAACCCTTAA+TGG + chr2_4:44710472-44710491 Msa0330380:three_prime_UTR 40.0%
GAAAGAAAACAATCCCGACT+TGG + chr2_4:44710568-44710587 Msa0330380:three_prime_UTR 40.0%
ACTGGTAACTTGGGAATGAA+TGG - chr2_4:44710731-44710750 None:intergenic 40.0%
! TCCTCATTGACTGGTAACTT+GGG - chr2_4:44710740-44710759 None:intergenic 40.0%
! TTCCTCATTGACTGGTAACT+TGG - chr2_4:44710741-44710760 None:intergenic 40.0%
GTTTCTGATTCCTCATTGAC+TGG - chr2_4:44710749-44710768 None:intergenic 40.0%
TAATGGTTGTGAACAGTTGG+TGG - chr2_4:44710771-44710790 None:intergenic 40.0%
CTCTCACTATGACCTTGTAA+TGG - chr2_4:44710788-44710807 None:intergenic 40.0%
CATCACATGAGAAAAGTTGG+TGG + chr2_4:44710899-44710918 Msa0330380:three_prime_UTR 40.0%
GAGAAAGTGAGAGTCTCTAT+TGG + chr2_4:44710938-44710957 Msa0330380:three_prime_UTR 40.0%
AGAGTCTCTATTGGAAGTAG+AGG + chr2_4:44710947-44710966 Msa0330380:three_prime_UTR 40.0%
GAGTCTCTATTGGAAGTAGA+GGG + chr2_4:44710948-44710967 Msa0330380:three_prime_UTR 40.0%
TAGAGGGAAATTGGCACAAA+GGG + chr2_4:44710964-44710983 Msa0330380:three_prime_UTR 40.0%
GTTGGAAATGGTAGTAGAAG+AGG + chr2_4:44710995-44711014 Msa0330380:three_prime_UTR 40.0%
ATGTGAAATGGGAGAATGCA+TGG + chr2_4:44711191-44711210 Msa0330380:three_prime_UTR 40.0%
! AACAGTCAACTCTAGAGATG+TGG - chr2_4:44711281-44711300 None:intergenic 40.0%
TGTGGAGGAAACCCTAGTTA+TGG + chr2_4:44705961-44705980 Msa0330380:CDS 45.0%
GTTTCAGGACGGTCGATATT+AGG + chr2_4:44706259-44706278 Msa0330380:intron 45.0%
TTCGATGACCTCACCAGATT+TGG + chr2_4:44706285-44706304 Msa0330380:CDS 45.0%
ACAGATCACCAAATCTGGTG+AGG - chr2_4:44706296-44706315 None:intergenic 45.0%
GCAGAACAGATCACCAAATC+TGG - chr2_4:44706301-44706320 None:intergenic 45.0%
GATTCCAGCATTATCTGGTG+AGG - chr2_4:44706323-44706342 None:intergenic 45.0%
ATGGAGCTTTCTCTCGAGAA+TGG + chr2_4:44706406-44706425 Msa0330380:CDS 45.0%
GTGTCAGACTATTGAACCAG+AGG + chr2_4:44706495-44706514 Msa0330380:CDS 45.0%
TGAAGCTCAAAGGAAGCTTC+AGG - chr2_4:44706535-44706554 None:intergenic 45.0%
GACTCGTCGTCTTTAGTTAC+CGG - chr2_4:44706565-44706584 None:intergenic 45.0%
ACTCACTTCGAGAGTAGTCT+CGG - chr2_4:44706591-44706610 None:intergenic 45.0%
! AGAAGATGGTAGAGTGTCTC+AGG + chr2_4:44706720-44706739 Msa0330380:three_prime_UTR 45.0%
GTAGGATGAAGAGGATGTTG+GGG + chr2_4:44706849-44706868 Msa0330380:intron 45.0%
TGAGTGTCAGAGAAAAGAGC+TGG + chr2_4:44706906-44706925 Msa0330380:three_prime_UTR 45.0%
GAAAAGAGCTGGCAGTAACA+AGG + chr2_4:44706917-44706936 Msa0330380:three_prime_UTR 45.0%
CAGTAACAAGGAGGGAGTTA+GGG + chr2_4:44706929-44706948 Msa0330380:three_prime_UTR 45.0%
AGTAACAAGGAGGGAGTTAG+GGG + chr2_4:44706930-44706949 Msa0330380:three_prime_UTR 45.0%
CATCACTGAGAGACTTGATG+AGG + chr2_4:44707290-44707309 Msa0330380:three_prime_UTR 45.0%
! TTCATCTCTTCGGCATTGAG+AGG - chr2_4:44707736-44707755 None:intergenic 45.0%
CTCAATGCCGAAGAGATGAA+AGG + chr2_4:44707736-44707755 Msa0330380:three_prime_UTR 45.0%
AATGCCGAAGAGATGAAAGG+AGG + chr2_4:44707739-44707758 Msa0330380:three_prime_UTR 45.0%
!! TTTGGCCCTCAAGTTGAACA+AGG + chr2_4:44707859-44707878 Msa0330380:three_prime_UTR 45.0%
GCATATGGACAAACTGGTAC+CGG + chr2_4:44708047-44708066 Msa0330380:three_prime_UTR 45.0%
CGGAAAAACCTTCACAATGG+AGG + chr2_4:44708067-44708086 Msa0330380:three_prime_UTR 45.0%
ATCCAGGAATGTCTGCAAGA+AGG + chr2_4:44708243-44708262 Msa0330380:three_prime_UTR 45.0%
TACCTTCTTGCAGACATTCC+TGG - chr2_4:44708248-44708267 None:intergenic 45.0%
AGATTGGAGATAAGGCAAGC+TGG + chr2_4:44708518-44708537 Msa0330380:intron 45.0%
GGTGAAGGAATGCATATTCC+AGG + chr2_4:44708539-44708558 Msa0330380:three_prime_UTR 45.0%
AGGAATGCATATTCCAGGGT+TGG + chr2_4:44708544-44708563 Msa0330380:three_prime_UTR 45.0%
TTGCATTGCTGCCAGTTTGT+AGG - chr2_4:44708610-44708629 None:intergenic 45.0%
TACAAACTGGCAGCAATGCA+AGG + chr2_4:44708609-44708628 Msa0330380:three_prime_UTR 45.0%
ACAAACTGGCAGCAATGCAA+GGG + chr2_4:44708610-44708629 Msa0330380:three_prime_UTR 45.0%
! TTATGGCTTGTGGACTTAGC+AGG + chr2_4:44708740-44708759 Msa0330380:three_prime_UTR 45.0%
! GTTGCAAAGACAGAAGTGCA+AGG + chr2_4:44708773-44708792 Msa0330380:three_prime_UTR 45.0%
TTGCAGCAAGTGTGTAAGCT+TGG - chr2_4:44709260-44709279 None:intergenic 45.0%
!!! TGTCCCACTGCTTTTTTGGA+GGG - chr2_4:44709519-44709538 None:intergenic 45.0%
!!! ACTGTGTCCCACTGCTTTTT+TGG - chr2_4:44709523-44709542 None:intergenic 45.0%
GCAGCATATGGACATGTCAT+AGG + chr2_4:44710087-44710106 Msa0330380:intron 45.0%
AAATTTGCAGGTGAAGGAGC+TGG + chr2_4:44710292-44710311 Msa0330380:intron 45.0%
!!! GAAGCTCTTGACGCCTTTTT+TGG - chr2_4:44710614-44710633 None:intergenic 45.0%
AACTGTGTTAAGCTTGGGAG+TGG - chr2_4:44710701-44710720 None:intergenic 45.0%
TCCCAAGTTACCAGTCAATG+AGG + chr2_4:44710736-44710755 Msa0330380:three_prime_UTR 45.0%
! TGGTGGTGTAAATGTAGGGA+TGG + chr2_4:44710916-44710935 Msa0330380:three_prime_UTR 45.0%
GTAGAGGGAAATTGGCACAA+AGG + chr2_4:44710963-44710982 Msa0330380:three_prime_UTR 45.0%
AGAGGGAAATTGGCACAAAG+GGG + chr2_4:44710965-44710984 Msa0330380:three_prime_UTR 45.0%
GGAAATGGTAGTAGAAGAGG+TGG + chr2_4:44710998-44711017 Msa0330380:three_prime_UTR 45.0%
AATGGTAGTAGAAGAGGTGG+TGG + chr2_4:44711001-44711020 Msa0330380:three_prime_UTR 45.0%
ATAAGGACAAGGAAAGGGCA+TGG + chr2_4:44711053-44711072 Msa0330380:three_prime_UTR 45.0%
!! TATGATAAAAATAAAAATAA+AGG - chr2_4:44705564-44705583 None:intergenic 5.0%
GCAGCAGATCCTCAATCTTG+TGG + chr2_4:44705943-44705962 Msa0330380:CDS 50.0%
GCAGATCCTCAATCTTGTGG+AGG + chr2_4:44705946-44705965 Msa0330380:CDS 50.0%
GGGTTTCCTCCACAAGATTG+AGG - chr2_4:44705955-44705974 None:intergenic 50.0%
TCTGCCTCACCAGATAATGC+TGG + chr2_4:44706316-44706335 Msa0330380:CDS 50.0%
GGTGAGACTAACTCTTCCTC+TGG - chr2_4:44706514-44706533 None:intergenic 50.0%
TCGTCGTCTTTAGTTACCGG+CGG - chr2_4:44706562-44706581 None:intergenic 50.0%
TCACTTCGAGAGTAGTCTCG+GGG - chr2_4:44706589-44706608 None:intergenic 50.0%
CTCACTTCGAGAGTAGTCTC+GGG - chr2_4:44706590-44706609 None:intergenic 50.0%
AGTGTCTCAGGAGACAGAGT+TGG + chr2_4:44706732-44706751 Msa0330380:three_prime_UTR 50.0%
AAGAGCTGGCAGTAACAAGG+AGG + chr2_4:44706920-44706939 Msa0330380:three_prime_UTR 50.0%
AGAGCTGGCAGTAACAAGGA+GGG + chr2_4:44706921-44706940 Msa0330380:three_prime_UTR 50.0%
GCAGTAACAAGGAGGGAGTT+AGG + chr2_4:44706928-44706947 Msa0330380:three_prime_UTR 50.0%
ATGCGCAAGTCGATGCATGT+AGG + chr2_4:44707033-44707052 Msa0330380:three_prime_UTR 50.0%
! TAAGGGTCTTTTGCCGGTGT+AGG + chr2_4:44707710-44707729 Msa0330380:three_prime_UTR 50.0%
GGCTCCTCCTTTCATCTCTT+CGG - chr2_4:44707746-44707765 None:intergenic 50.0%
GATGAAAGGAGGAGCCACAA+TGG + chr2_4:44707750-44707769 Msa0330380:three_prime_UTR 50.0%
TTCTGTGCCCTCCATTGTGA+AGG - chr2_4:44708078-44708097 None:intergenic 50.0%
CTGGTTTCAGGGAATCATCC+AGG + chr2_4:44708227-44708246 Msa0330380:three_prime_UTR 50.0%
GAGATAAGGCAAGCTGGTGA+AGG + chr2_4:44708524-44708543 Msa0330380:three_prime_UTR 50.0%
!! GCATATTCCAGGGTTGGTTG+AGG + chr2_4:44708550-44708569 Msa0330380:three_prime_UTR 50.0%
GTGTGGGAAGTCCTACAAAC+TGG + chr2_4:44708596-44708615 Msa0330380:three_prime_UTR 50.0%
CACAGTGAATGCAGTGCGAT+CGG - chr2_4:44708670-44708689 None:intergenic 50.0%
GCACTGCATTCACTGTGTCA+TGG + chr2_4:44708673-44708692 Msa0330380:three_prime_UTR 50.0%
GCTCTCCCAAACAATCTCAC+AGG - chr2_4:44708977-44708996 None:intergenic 50.0%
! CACTTGCTGCAAGACTCGTT+AGG + chr2_4:44709268-44709287 Msa0330380:three_prime_UTR 50.0%
!!! GTGTCCCACTGCTTTTTTGG+AGG - chr2_4:44709520-44709539 None:intergenic 50.0%
TTCCTTCGGCAGCTACTTCA+AGG + chr2_4:44710660-44710679 Msa0330380:three_prime_UTR 50.0%
GAGGGAAATTGGCACAAAGG+GGG + chr2_4:44710966-44710985 Msa0330380:three_prime_UTR 50.0%
AGGGAAATTGGCACAAAGGG+GGG + chr2_4:44710967-44710986 Msa0330380:three_prime_UTR 50.0%
CTTTGAGCTTCATCCACCGC+CGG + chr2_4:44706543-44706562 Msa0330380:CDS 55.0%
TCGTCTTTAGTTACCGGCGG+TGG - chr2_4:44706559-44706578 None:intergenic 55.0%
GGAGTTAGGGGAGCTCAAGA+GGG + chr2_4:44706942-44706961 Msa0330380:three_prime_UTR 55.0%
ACATGTGCCTCAACCAACCC+TGG - chr2_4:44708560-44708579 None:intergenic 55.0%
TGGGCCCTCCAAAAAAGCAG+TGG + chr2_4:44709512-44709531 Msa0330380:three_prime_UTR 55.0%
GGGCCCTCCAAAAAAGCAGT+GGG + chr2_4:44709513-44709532 Msa0330380:three_prime_UTR 55.0%
GATGACACCGCGCATTCCTT+CGG + chr2_4:44710646-44710665 Msa0330380:three_prime_UTR 55.0%
CTCCTTGAAGTAGCTGCCGA+AGG - chr2_4:44710665-44710684 None:intergenic 55.0%
! AGGGGGGTGCAAGTTGGAAA+TGG + chr2_4:44710983-44711002 Msa0330380:three_prime_UTR 55.0%
CGGCGGTGGATGAAGCTCAA+AGG - chr2_4:44706545-44706564 None:intergenic 60.0%
GGGAGTTAGGGGAGCTCAAG+AGG + chr2_4:44706941-44706960 Msa0330380:three_prime_UTR 60.0%
! CGGCATTGAGAGGCCTACAC+CGG - chr2_4:44707726-44707745 None:intergenic 60.0%
! GAGGGCACAGAAGAGTCTCG+AGG + chr2_4:44708086-44708105 Msa0330380:three_prime_UTR 60.0%
GTAGCTGCCGAAGGAATGCG+CGG - chr2_4:44710656-44710675 None:intergenic 60.0%
! GCACAAAGGGGGGTGCAAGT+TGG + chr2_4:44710977-44710996 Msa0330380:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 44705399 44711310 44705399 ID=Msa0330380;Name=Msa0330380
chr2_4 mRNA 44705399 44711310 44705399 ID=Msa0330380-mRNA-1;Parent=Msa0330380;Name=Msa0330380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=301|1|1|1|1|0.92|14|2797|206
chr2_4 exon 44705399 44705790 44705399 ID=Msa0330380-mRNA-1:exon:13666;Parent=Msa0330380-mRNA-1
chr2_4 exon 44705899 44705982 44705899 ID=Msa0330380-mRNA-1:exon:13667;Parent=Msa0330380-mRNA-1
chr2_4 exon 44706093 44706173 44706093 ID=Msa0330380-mRNA-1:exon:13668;Parent=Msa0330380-mRNA-1
chr2_4 exon 44706266 44706765 44706266 ID=Msa0330380-mRNA-1:exon:13669;Parent=Msa0330380-mRNA-1
chr2_4 exon 44706853 44707063 44706853 ID=Msa0330380-mRNA-1:exon:13670;Parent=Msa0330380-mRNA-1
chr2_4 exon 44707245 44707321 44707245 ID=Msa0330380-mRNA-1:exon:13671;Parent=Msa0330380-mRNA-1
chr2_4 exon 44707405 44707504 44707405 ID=Msa0330380-mRNA-1:exon:13672;Parent=Msa0330380-mRNA-1
chr2_4 exon 44707605 44707880 44707605 ID=Msa0330380-mRNA-1:exon:13673;Parent=Msa0330380-mRNA-1
chr2_4 exon 44707979 44708264 44707979 ID=Msa0330380-mRNA-1:exon:13674;Parent=Msa0330380-mRNA-1
chr2_4 exon 44708520 44708894 44708520 ID=Msa0330380-mRNA-1:exon:13675;Parent=Msa0330380-mRNA-1
chr2_4 exon 44709252 44709289 44709252 ID=Msa0330380-mRNA-1:exon:13676;Parent=Msa0330380-mRNA-1
chr2_4 exon 44709404 44709567 44709404 ID=Msa0330380-mRNA-1:exon:13677;Parent=Msa0330380-mRNA-1
chr2_4 exon 44709737 44709862 44709737 ID=Msa0330380-mRNA-1:exon:13678;Parent=Msa0330380-mRNA-1
chr2_4 exon 44710302 44711310 44710302 ID=Msa0330380-mRNA-1:exon:13679;Parent=Msa0330380-mRNA-1
chr2_4 five_prime_UTR 44705399 44705699 44705399 ID=Msa0330380-mRNA-1:five_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 CDS 44705700 44705790 44705700 ID=Msa0330380-mRNA-1:cds;Parent=Msa0330380-mRNA-1
chr2_4 CDS 44705899 44705982 44705899 ID=Msa0330380-mRNA-1:cds;Parent=Msa0330380-mRNA-1
chr2_4 CDS 44706093 44706173 44706093 ID=Msa0330380-mRNA-1:cds;Parent=Msa0330380-mRNA-1
chr2_4 CDS 44706266 44706630 44706266 ID=Msa0330380-mRNA-1:cds;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44706631 44706765 44706631 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44706853 44707063 44706853 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44707245 44707321 44707245 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44707405 44707504 44707405 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44707605 44707880 44707605 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44707979 44708264 44707979 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44708520 44708894 44708520 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44709252 44709289 44709252 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44709404 44709567 44709404 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44709737 44709862 44709737 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
chr2_4 three_prime_UTR 44710302 44711310 44710302 ID=Msa0330380-mRNA-1:three_prime_utr;Parent=Msa0330380-mRNA-1
Gene Sequence

>Msa0330380

ATGGAAGATAATGAATTGAATCTCTATGATCATGACCCTCTTCTTCTAACTGATGCTTCTTTTCAACAACAACAAGAAACCACTTCCACTAGAGTTTCAAAATCATCACTTAGCTCTATGAATTCAGCTATGGAGGCAGCAGATCCTCAATCTTGTGGAGGAAACCCTAGTTATGAATTGTGTATGAAAAATGGAAGCTTGGAAAGGAACAGCTTGCAATTTGATGACCCAGTTGTGAAAAATTTGGTTGATGATGGACGGTCGATATTAGGGTTTTCGATGACCTCACCAGATTTGGTGATCTGTTCTGCCTCACCAGATAATGCTGGAATCAGTTATTGTGATTCTCCTGAATTGTTTAAGAAGAACAAAAATTGCTACAATTTGGATTCATCTATGGAGCTTTCTCTCGAGAATGGTATCAATGGACCTGAAGTTGAAGTTTACAATGTCCATAAGACTCCAACTGTTAAATTCTCGAATGTGTGTCAGACTATTGAACCAGAGGAAGAGTTAGTCTCACCTGAAGCTTCCTTTGAGCTTCATCCACCGCCGGTAACTAAAGACGACGAGTCGCCCCGAGACTACTCTCGAAGTGAGTTCAATTCTTTGTATCTCTAA

Protein sequence

>Msa0330380

MEDNELNLYDHDPLLLTDASFQQQQETTSTRVSKSSLSSMNSAMEAADPQSCGGNPSYELCMKNGSLERNSLQFDDPVVKNLVDDGRSILGFSMTSPDLVICSASPDNAGISYCDSPELFKKNKNCYNLDSSMELSLENGINGPEVEVYNVHKTPTVKFSNVCQTIEPEEELVSPEASFELHPPPVTKDDESPRDYSRSEFNSLYL*