Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0975970 | XP_013451026.1 | 96.697 | 333 | 9 | 2 | 111 | 441 | 1 | 333 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0975970 | sp|Q9S7W5|TCP13_ARATH | 55.172 | 145 | 52 | 2 | 95 | 228 | 2 | 144 | 8.43e-40 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0975970 | A0A072U6R0 | 96.697 | 333 | 9 | 2 | 111 | 441 | 1 | 333 | 0.0 | 655 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0975970 | TF | TCP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043960 | Msa0975970 | -0.812821 | 3.495401e-51 | -8.615850e-47 |
| Msa0044050 | Msa0975970 | -0.807772 | 4.292438e-50 | -8.615850e-47 |
| Msa0090620 | Msa0975970 | -0.802081 | 6.643017e-49 | -8.615850e-47 |
| Msa0782030 | Msa0975970 | 0.820454 | 6.801950e-53 | -8.615850e-47 |
| Msa0793060 | Msa0975970 | 0.810731 | 9.964658e-51 | -8.615850e-47 |
| Msa0796450 | Msa0975970 | 0.800299 | 1.538019e-48 | -8.615850e-47 |
| Msa0183800 | Msa0975970 | -0.810065 | 1.387149e-50 | -8.615850e-47 |
| Msa0216560 | Msa0975970 | 0.829040 | 6.430921e-55 | -8.615850e-47 |
| Msa0223100 | Msa0975970 | 0.818482 | 1.915857e-52 | -8.615850e-47 |
| Msa0370870 | Msa0975970 | 0.808547 | 2.935407e-50 | -8.615850e-47 |
| Msa0256430 | Msa0975970 | 0.800927 | 1.145517e-48 | -8.615850e-47 |
| Msa0295840 | Msa0975970 | 0.836883 | 7.207417e-57 | -8.615850e-47 |
| Msa0310490 | Msa0975970 | 0.804787 | 1.826855e-49 | -8.615850e-47 |
| Msa0339870 | Msa0975970 | 0.801254 | 9.821502e-49 | -8.615850e-47 |
| Msa0363100 | Msa0975970 | 0.802850 | 4.613700e-49 | -8.615850e-47 |
| Msa0552580 | Msa0975970 | 0.816538 | 5.253168e-52 | -8.615850e-47 |
| Msa0873930 | Msa0975970 | 0.816240 | 6.123069e-52 | -8.615850e-47 |
| Msa0887070 | Msa0975970 | 0.808318 | 3.284568e-50 | -8.615850e-47 |
| Msa0906670 | Msa0975970 | 0.803039 | 4.215722e-49 | -8.615850e-47 |
| Msa0975970 | Msa0981900 | 0.805770 | 1.137145e-49 | -8.615850e-47 |
| Msa0975970 | Msa0982590 | 0.806283 | 8.866991e-50 | -8.615850e-47 |
| Msa0975970 | Msa1138600 | 0.812674 | 3.765365e-51 | -8.615850e-47 |
| Msa0975970 | Msa1157020 | 0.813992 | 1.933194e-51 | -8.615850e-47 |
| Msa0975970 | Msa1235760 | 0.806517 | 7.918031e-50 | -8.615850e-47 |
| Msa0975970 | Msa1284390 | 0.810463 | 1.138313e-50 | -8.615850e-47 |
| Msa0975970 | Msa1368180 | 0.812623 | 3.862885e-51 | -8.615850e-47 |
| Msa0975970 | Msa1385580 | 0.800325 | 1.519660e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0975970 | MtrunA17_Chr6g0454781 | 96.697 | 333 | 9 | 2 | 111 | 441 | 1 | 333 | 0.0 | 655 |
| Msa0975970 | MtrunA17_Chr7g0219461 | 44.624 | 372 | 143 | 19 | 112 | 441 | 1 | 351 | 1.06e-64 | 211 |
| Msa0975970 | MtrunA17_Chr4g0061561 | 69.318 | 88 | 27 | 0 | 136 | 223 | 35 | 122 | 2.13e-37 | 138 |
| Msa0975970 | MtrunA17_Chr3g0086961 | 64.762 | 105 | 34 | 2 | 135 | 237 | 32 | 135 | 8.67e-37 | 139 |
| Msa0975970 | MtrunA17_Chr8g0376571 | 72.222 | 72 | 20 | 0 | 148 | 219 | 51 | 122 | 3.02e-27 | 113 |
| Msa0975970 | MtrunA17_Chr2g0325171 | 58.140 | 86 | 30 | 2 | 136 | 218 | 5 | 87 | 2.73e-23 | 100 |
| Msa0975970 | MtrunA17_Chr4g0040921 | 56.250 | 96 | 36 | 2 | 136 | 228 | 3 | 95 | 2.96e-23 | 100 |
| Msa0975970 | MtrunA17_Chr8g0360441 | 54.023 | 87 | 37 | 1 | 133 | 219 | 32 | 115 | 7.61e-21 | 94.4 |
| Msa0975970 | MtrunA17_Chr2g0316391 | 51.042 | 96 | 44 | 2 | 152 | 247 | 14 | 106 | 2.14e-20 | 91.3 |
| Msa0975970 | MtrunA17_Chr6g0456881 | 37.086 | 151 | 80 | 4 | 159 | 297 | 127 | 274 | 2.98e-16 | 80.5 |
| Msa0975970 | MtrunA17_Chr7g0220931 | 56.140 | 57 | 25 | 0 | 160 | 216 | 122 | 178 | 2.61e-14 | 74.3 |
| Msa0975970 | MtrunA17_Chr4g0062691 | 60.000 | 55 | 22 | 0 | 159 | 213 | 133 | 187 | 3.65e-14 | 73.9 |
| Msa0975970 | MtrunA17_Chr1g0205131 | 51.667 | 60 | 29 | 0 | 157 | 216 | 108 | 167 | 7.72e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0975970 | AT3G02150.1 | 55.172 | 145 | 52 | 2 | 95 | 228 | 2 | 144 | 4.29e-41 | 147 |
| Msa0975970 | AT3G02150.2 | 55.172 | 145 | 52 | 2 | 95 | 228 | 2 | 144 | 8.56e-41 | 149 |
| Msa0975970 | AT5G60970.1 | 70.000 | 90 | 26 | 1 | 144 | 233 | 49 | 137 | 4.94e-37 | 139 |
| Msa0975970 | AT5G08070.2 | 66.667 | 93 | 28 | 1 | 132 | 224 | 10 | 99 | 3.36e-36 | 134 |
| Msa0975970 | AT5G08070.1 | 66.667 | 93 | 28 | 1 | 132 | 224 | 10 | 99 | 3.36e-36 | 134 |
| Msa0975970 | AT1G30210.2 | 70.833 | 72 | 21 | 0 | 148 | 219 | 40 | 111 | 3.26e-27 | 111 |
| Msa0975970 | AT1G30210.1 | 70.833 | 72 | 21 | 0 | 148 | 219 | 40 | 111 | 3.26e-27 | 111 |
| Msa0975970 | AT4G18390.1 | 69.444 | 72 | 22 | 0 | 148 | 219 | 32 | 103 | 1.30e-26 | 110 |
| Msa0975970 | AT4G18390.2 | 69.444 | 72 | 22 | 0 | 148 | 219 | 32 | 103 | 1.30e-26 | 110 |
| Msa0975970 | AT3G15030.2 | 64.286 | 70 | 22 | 1 | 152 | 218 | 39 | 108 | 5.35e-21 | 95.1 |
| Msa0975970 | AT3G15030.4 | 64.286 | 70 | 22 | 1 | 152 | 218 | 39 | 108 | 5.35e-21 | 95.1 |
| Msa0975970 | AT3G15030.3 | 64.286 | 70 | 22 | 1 | 152 | 218 | 39 | 108 | 5.35e-21 | 95.1 |
| Msa0975970 | AT3G15030.1 | 64.286 | 70 | 22 | 1 | 152 | 218 | 39 | 108 | 5.35e-21 | 95.1 |
| Msa0975970 | AT2G31070.1 | 66.154 | 65 | 22 | 0 | 152 | 216 | 23 | 87 | 9.70e-21 | 93.6 |
| Msa0975970 | AT1G53230.1 | 61.972 | 71 | 25 | 1 | 152 | 222 | 43 | 111 | 2.93e-20 | 92.8 |
| Msa0975970 | AT1G53230.2 | 61.972 | 71 | 25 | 1 | 152 | 222 | 43 | 111 | 2.93e-20 | 92.8 |
| Msa0975970 | AT3G18550.2 | 34.058 | 138 | 89 | 2 | 145 | 281 | 136 | 272 | 9.43e-15 | 76.3 |
| Msa0975970 | AT3G18550.3 | 34.266 | 143 | 86 | 4 | 145 | 281 | 136 | 276 | 2.64e-14 | 75.1 |
| Msa0975970 | AT3G18550.1 | 34.266 | 143 | 86 | 4 | 145 | 281 | 136 | 276 | 3.01e-14 | 74.7 |
| Msa0975970 | AT3G18550.4 | 34.266 | 143 | 86 | 4 | 145 | 281 | 136 | 276 | 3.01e-14 | 74.7 |
| Msa0975970 | AT1G67260.2 | 47.143 | 70 | 37 | 0 | 147 | 216 | 76 | 145 | 4.10e-14 | 73.9 |
| Msa0975970 | AT1G67260.3 | 47.143 | 70 | 37 | 0 | 147 | 216 | 76 | 145 | 4.10e-14 | 73.9 |
| Msa0975970 | AT1G67260.1 | 47.143 | 70 | 37 | 0 | 147 | 216 | 76 | 145 | 4.15e-14 | 73.9 |
| Msa0975970 | AT1G68800.2 | 46.269 | 67 | 36 | 0 | 150 | 216 | 104 | 170 | 1.09e-12 | 69.7 |
| Msa0975970 | AT1G68800.1 | 46.269 | 67 | 36 | 0 | 150 | 216 | 104 | 170 | 1.11e-12 | 69.3 |
Find 83 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAAATCTTGATCTTTA+TGG | 0.044174 | 6_4:-9812158 | None:intergenic |
| GTTCCTCAATTATCAAATTT+TGG | 0.140456 | 6_4:+9811877 | Msa0975970:CDS |
| TTCCATCTATATCTTTAATT+TGG | 0.175055 | 6_4:-9811909 | None:intergenic |
| TGTGTTACTTATTTCATATT+TGG | 0.214171 | 6_4:+9812262 | Msa0975970:three_prime_UTR |
| GGCAAAACAACACTTCAATT+TGG | 0.234675 | 6_4:+9811590 | Msa0975970:CDS |
| GTAAAGATTATTAAACTAAA+TGG | 0.247880 | 6_4:-9812308 | None:intergenic |
| AGGAAAATCTTGATCTTTAT+GGG | 0.249668 | 6_4:-9812157 | None:intergenic |
| ATTTCTCTCATTGTTGTTGT+TGG | 0.264543 | 6_4:-9811167 | None:intergenic |
| GGAAAATTAAGTTTCATATA+TGG | 0.267361 | 6_4:-9812287 | None:intergenic |
| AACTCAACATTTGATCATAT+TGG | 0.267875 | 6_4:-9812041 | None:intergenic |
| ATCAAATTCTAAACAAGGTT+TGG | 0.270536 | 6_4:+9811615 | Msa0975970:CDS |
| AATGGAAATTCGGCTTCTTT+TGG | 0.274258 | 6_4:-9811205 | None:intergenic |
| AGCAAAGTATACACAATAAA+AGG | 0.279500 | 6_4:+9811349 | Msa0975970:CDS |
| CTCTTTGCCATTCCTTTATA+CGG | 0.279945 | 6_4:+9810113 | Msa0975970:CDS |
| TTGTTACTAACAAAGAAAAT+TGG | 0.289821 | 6_4:+9811644 | Msa0975970:CDS |
| AAATGCGGTGATAGACTATT+TGG | 0.299508 | 6_4:-9811739 | None:intergenic |
| GAACCGACCACGCCGTATAA+AGG | 0.326659 | 6_4:-9810125 | None:intergenic |
| CTAGACACCCTCACAATTCT+TGG | 0.330306 | 6_4:-9811301 | None:intergenic |
| AATCCAAAACATTAAAATCT+TGG | 0.331212 | 6_4:-9812200 | None:intergenic |
| TCCATTGTAAAATGTTGTTT+TGG | 0.339478 | 6_4:-9811138 | None:intergenic |
| AAAGATATAGATGGAAATAA+TGG | 0.354082 | 6_4:+9811916 | Msa0975970:CDS |
| TCAAATTCTAAACAAGGTTT+GGG | 0.369970 | 6_4:+9811616 | Msa0975970:CDS |
| TAAAAGGACTAAGAGATAGA+AGG | 0.370333 | 6_4:+9811365 | Msa0975970:CDS |
| CATAGAGGTGAATTGCTGTT+TGG | 0.373931 | 6_4:-9811402 | None:intergenic |
| TATGATCTTCAAGATAGGTT+AGG | 0.379456 | 6_4:+9811421 | Msa0975970:CDS |
| GTGAGGGTGTCTAGAGCCTT+TGG | 0.385600 | 6_4:+9811310 | Msa0975970:CDS |
| ATCATATTTGAGACATTGTC+AGG | 0.398351 | 6_4:-9811766 | None:intergenic |
| TGAAAATAGAAACTTTGGTT+TGG | 0.404508 | 6_4:-9810229 | None:intergenic |
| CTATTTCTAATGATGATGTT+AGG | 0.414220 | 6_4:+9811569 | Msa0975970:CDS |
| GATGTAGTTGAATCATTTGA+TGG | 0.415928 | 6_4:-9811244 | None:intergenic |
| TATGCCACTTGGTTATCAAT+TGG | 0.423897 | 6_4:+9811837 | Msa0975970:CDS |
| TGGTTTGAAAATAGAAACTT+TGG | 0.427564 | 6_4:-9810234 | None:intergenic |
| GGAAAAGGAAGATGCAGAAA+TGG | 0.430221 | 6_4:-9810147 | None:intergenic |
| AACCAAATTAAAGATATAGA+TGG | 0.439517 | 6_4:+9811907 | Msa0975970:CDS |
| AATCCAAAATTTGATAATTG+AGG | 0.443514 | 6_4:-9811880 | None:intergenic |
| ACCTCTATGATCTTCAAGAT+AGG | 0.446546 | 6_4:+9811416 | Msa0975970:CDS |
| CCTCAAGGAAACTTCACCTT+AGG | 0.453243 | 6_4:+9811526 | Msa0975970:CDS |
| AACCTAGCAAGGTTGTTGAT+TGG | 0.456423 | 6_4:+9811452 | Msa0975970:CDS |
| GTCCGCAGCTAAGTAGGAAA+AGG | 0.483751 | 6_4:-9810162 | None:intergenic |
| AATCAACAACCTTGCTAGGT+TGG | 0.486484 | 6_4:-9811450 | None:intergenic |
| ATGATCTTCAAGATAGGTTA+GGG | 0.493307 | 6_4:+9811422 | Msa0975970:CDS |
| TATTGGTAATTGATTTGTGT+TGG | 0.498253 | 6_4:-9812024 | None:intergenic |
| AGAAGGTTGATTTGCTCCAC+GGG | 0.498527 | 6_4:-9811794 | None:intergenic |
| GGTTGAGTCCGCAGCTAAGT+AGG | 0.503341 | 6_4:-9810168 | None:intergenic |
| GAAATAGTACTAGCAAAAGA+TGG | 0.507242 | 6_4:-9811553 | None:intergenic |
| CCTTGAGGTATTTGCAGTGG+TGG | 0.515778 | 6_4:-9811511 | None:intergenic |
| ACATGTTGGAGCAGTGGAGA+TGG | 0.522376 | 6_4:+9811999 | Msa0975970:CDS |
| TTGGTTGCTTAATATAGCTA+AGG | 0.527119 | 6_4:+9811471 | Msa0975970:CDS |
| TCCTTCACATGTTGGAGCAG+TGG | 0.532029 | 6_4:+9811993 | Msa0975970:CDS |
| GTTGACAAACACAATGATGA+TGG | 0.532423 | 6_4:-9811958 | None:intergenic |
| ACCCTCATGAGTTGTTGAGT+TGG | 0.533643 | 6_4:-9812090 | None:intergenic |
| AAAAGGACTAAGAGATAGAA+GGG | 0.548162 | 6_4:+9811366 | Msa0975970:CDS |
| TCCACTGCTCCAACATGTGA+AGG | 0.549384 | 6_4:-9811994 | None:intergenic |
| CAAACACAATGATGATGGAA+AGG | 0.552149 | 6_4:-9811953 | None:intergenic |
| AGAGGATAAAGAGAAGAAAG+AGG | 0.553162 | 6_4:+9811681 | Msa0975970:CDS |
| AGCAAAAGATGGATAACCTA+AGG | 0.554824 | 6_4:-9811542 | None:intergenic |
| TTTCCTTGAGGTATTTGCAG+TGG | 0.559362 | 6_4:-9811514 | None:intergenic |
| TCATATATAGTACTTCTAGT+TGG | 0.562543 | 6_4:+9810271 | Msa0975970:CDS |
| AAGAAGGTTGATTTGCTCCA+CGG | 0.566627 | 6_4:-9811795 | None:intergenic |
| TGGAAATCAAATTCTAAACA+AGG | 0.571909 | 6_4:+9811610 | Msa0975970:CDS |
| AAACACAATGATGATGGAAA+GGG | 0.575569 | 6_4:-9811952 | None:intergenic |
| TTGGATGAATAGAAGTGAAG+AGG | 0.578717 | 6_4:+9811663 | Msa0975970:CDS |
| TCAAATATGATTATCTCCCG+TGG | 0.582563 | 6_4:+9811778 | Msa0975970:CDS |
| ATAAAGGAATGGCAAAGAGT+TGG | 0.583318 | 6_4:-9810109 | None:intergenic |
| TTGTTGAACACTATGCCACT+TGG | 0.583813 | 6_4:+9811826 | Msa0975970:CDS |
| TGAGGAACATGACTAGATGA+AGG | 0.587719 | 6_4:-9811862 | None:intergenic |
| ACCTATCTTGAAGATCATAG+AGG | 0.598434 | 6_4:-9811417 | None:intergenic |
| AACCAATCAACAACCTTGCT+AGG | 0.598789 | 6_4:-9811454 | None:intergenic |
| ATATGATATATATGAAGATG+TGG | 0.601164 | 6_4:-9810254 | None:intergenic |
| TCTAGTTGGCATCAAAAGCA+AGG | 0.603969 | 6_4:+9810285 | Msa0975970:CDS |
| AGGGCTAAACCAACCTAGCA+AGG | 0.604516 | 6_4:+9811441 | Msa0975970:CDS |
| TAAAAGATCCAAGAATTGTG+AGG | 0.608827 | 6_4:+9811293 | Msa0975970:CDS |
| ATCCAACTCAACAACTCATG+AGG | 0.610385 | 6_4:+9812088 | Msa0975970:CDS |
| AAAAGATCCAAGAATTGTGA+GGG | 0.611796 | 6_4:+9811294 | Msa0975970:CDS |
| CCACCACTGCAAATACCTCA+AGG | 0.623276 | 6_4:+9811511 | Msa0975970:CDS |
| GACCACGCCGTATAAAGGAA+TGG | 0.627984 | 6_4:-9810120 | None:intergenic |
| CAATAAGGTTATATCTCACG+TGG | 0.645111 | 6_4:+9810086 | None:intergenic |
| TCCAACTCAACAACTCATGA+GGG | 0.652080 | 6_4:+9812089 | Msa0975970:CDS |
| AATTTGGTGAAGAAGTAACA+AGG | 0.656458 | 6_4:-9810189 | None:intergenic |
| CATCGTCAACAACATCGCAA+TGG | 0.668784 | 6_4:+9811263 | Msa0975970:CDS |
| CCTAAGGTGAAGTTTCCTTG+AGG | 0.673049 | 6_4:-9811526 | None:intergenic |
| GGCTCCAATTGATAACCAAG+TGG | 0.685997 | 6_4:-9811841 | None:intergenic |
| ACATTGTCAGGTACTAAATG+CGG | 0.686782 | 6_4:-9811754 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATTTTATAGAATAAATT+TGG | - | chr6_4:9810208-9810227 | None:intergenic | 10.0% |
| !!! | TAATTAAATATTTTGTATGA+AGG | - | chr6_4:9810802-9810821 | None:intergenic | 10.0% |
| !!! | AAATTTTATGTACAAATAAT+AGG | - | chr6_4:9810958-9810977 | None:intergenic | 10.0% |
| !!! | TAATTATGATTTAGAATATT+TGG | + | chr6_4:9810977-9810996 | Msa0975970:intron | 10.0% |
| !! | GAAAAATATTAGAAAATAAA+TGG | - | chr6_4:9811025-9811044 | None:intergenic | 10.0% |
| !!! | TTGATTTTATAGAATAAATT+TGG | - | chr6_4:9810208-9810227 | None:intergenic | 10.0% |
| !!! | TAATTAAATATTTTGTATGA+AGG | - | chr6_4:9810802-9810821 | None:intergenic | 10.0% |
| !!! | AAATTTTATGTACAAATAAT+AGG | - | chr6_4:9810958-9810977 | None:intergenic | 10.0% |
| !!! | TAATTATGATTTAGAATATT+TGG | + | chr6_4:9810977-9810996 | Msa0975970:intron | 10.0% |
| !! | GAAAAATATTAGAAAATAAA+TGG | - | chr6_4:9811025-9811044 | None:intergenic | 10.0% |
| !! | TGACACTTAAAAAAAAAAAA+AGG | + | chr6_4:9810721-9810740 | Msa0975970:intron | 15.0% |
| !!! | ATGTAATTTAAAACAAACAT+TGG | + | chr6_4:9810823-9810842 | Msa0975970:intron | 15.0% |
| !! | GTAAAGATTATTAAACTAAA+TGG | - | chr6_4:9812311-9812330 | None:intergenic | 15.0% |
| !! | TGACACTTAAAAAAAAAAAA+AGG | + | chr6_4:9810721-9810740 | Msa0975970:intron | 15.0% |
| !!! | ATGTAATTTAAAACAAACAT+TGG | + | chr6_4:9810823-9810842 | Msa0975970:intron | 15.0% |
| !! | GTAAAGATTATTAAACTAAA+TGG | - | chr6_4:9812311-9812330 | None:intergenic | 15.0% |
| !! | ATATGATATATATGAAGATG+TGG | - | chr6_4:9810257-9810276 | None:intergenic | 20.0% |
| !!! | TTTAATTTCTCTTTTTGAGA+AGG | + | chr6_4:9810695-9810714 | Msa0975970:intron | 20.0% |
| !!! | CTGTAATTTAAAACAAACAT+TGG | + | chr6_4:9810891-9810910 | Msa0975970:intron | 20.0% |
| !! | ATATTTGGTATTCTTATCAA+TGG | + | chr6_4:9810992-9811011 | Msa0975970:intron | 20.0% |
| !!! | TTCTTGTTTTAATGGAAATT+CGG | - | chr6_4:9811218-9811237 | None:intergenic | 20.0% |
| !! | TTGTTACTAACAAAGAAAAT+TGG | + | chr6_4:9811644-9811663 | Msa0975970:CDS | 20.0% |
| !!! | AATCCAAAATTTGATAATTG+AGG | - | chr6_4:9811883-9811902 | None:intergenic | 20.0% |
| !! | AACCAAATTAAAGATATAGA+TGG | + | chr6_4:9811907-9811926 | Msa0975970:CDS | 20.0% |
| !! | TTCCATCTATATCTTTAATT+TGG | - | chr6_4:9811912-9811931 | None:intergenic | 20.0% |
| !! | AAAGATATAGATGGAAATAA+TGG | + | chr6_4:9811916-9811935 | Msa0975970:CDS | 20.0% |
| !! | TTGAGAGAATGAAAAAATTT+AGG | - | chr6_4:9812120-9812139 | None:intergenic | 20.0% |
| !!! | ATACCAAGATTTTAATGTTT+TGG | + | chr6_4:9812197-9812216 | Msa0975970:three_prime_UTR | 20.0% |
| !! | AATCCAAAACATTAAAATCT+TGG | - | chr6_4:9812203-9812222 | None:intergenic | 20.0% |
| !!! | TGTGTTACTTATTTCATATT+TGG | + | chr6_4:9812262-9812281 | Msa0975970:three_prime_UTR | 20.0% |
| !! | GGAAAATTAAGTTTCATATA+TGG | - | chr6_4:9812290-9812309 | None:intergenic | 20.0% |
| !!! | TTGAAAAATTCATTTTTGCA+TGG | - | chr6_4:9812333-9812352 | None:intergenic | 20.0% |
| !! | ATATGATATATATGAAGATG+TGG | - | chr6_4:9810257-9810276 | None:intergenic | 20.0% |
| !!! | TTTAATTTCTCTTTTTGAGA+AGG | + | chr6_4:9810695-9810714 | Msa0975970:intron | 20.0% |
| !!! | CTGTAATTTAAAACAAACAT+TGG | + | chr6_4:9810891-9810910 | Msa0975970:intron | 20.0% |
| !! | ATATTTGGTATTCTTATCAA+TGG | + | chr6_4:9810992-9811011 | Msa0975970:intron | 20.0% |
| !!! | TTCTTGTTTTAATGGAAATT+CGG | - | chr6_4:9811218-9811237 | None:intergenic | 20.0% |
| !! | TTGTTACTAACAAAGAAAAT+TGG | + | chr6_4:9811644-9811663 | Msa0975970:CDS | 20.0% |
| !!! | AATCCAAAATTTGATAATTG+AGG | - | chr6_4:9811883-9811902 | None:intergenic | 20.0% |
| !! | AACCAAATTAAAGATATAGA+TGG | + | chr6_4:9811907-9811926 | Msa0975970:CDS | 20.0% |
| !! | TTCCATCTATATCTTTAATT+TGG | - | chr6_4:9811912-9811931 | None:intergenic | 20.0% |
| !! | AAAGATATAGATGGAAATAA+TGG | + | chr6_4:9811916-9811935 | Msa0975970:CDS | 20.0% |
| !! | TTGAGAGAATGAAAAAATTT+AGG | - | chr6_4:9812120-9812139 | None:intergenic | 20.0% |
| !!! | ATACCAAGATTTTAATGTTT+TGG | + | chr6_4:9812197-9812216 | Msa0975970:three_prime_UTR | 20.0% |
| !! | AATCCAAAACATTAAAATCT+TGG | - | chr6_4:9812203-9812222 | None:intergenic | 20.0% |
| !!! | TGTGTTACTTATTTCATATT+TGG | + | chr6_4:9812262-9812281 | Msa0975970:three_prime_UTR | 20.0% |
| !! | GGAAAATTAAGTTTCATATA+TGG | - | chr6_4:9812290-9812309 | None:intergenic | 20.0% |
| !!! | TTGAAAAATTCATTTTTGCA+TGG | - | chr6_4:9812333-9812352 | None:intergenic | 20.0% |
| ! | TGAAAATAGAAACTTTGGTT+TGG | - | chr6_4:9810232-9810251 | None:intergenic | 25.0% |
| ! | TGGTTTGAAAATAGAAACTT+TGG | - | chr6_4:9810237-9810256 | None:intergenic | 25.0% |
| ! | TCATATATAGTACTTCTAGT+TGG | + | chr6_4:9810271-9810290 | Msa0975970:CDS | 25.0% |
| ! | TAATATGATATGAGAGAAGA+AGG | - | chr6_4:9810324-9810343 | None:intergenic | 25.0% |
| ! | GATATATATCAAATAGTGTG+TGG | + | chr6_4:9810348-9810367 | Msa0975970:intron | 25.0% |
| ! | TCCTGTATATATATGTATCT+AGG | + | chr6_4:9810418-9810437 | Msa0975970:intron | 25.0% |
| ! | CCTGTATATATATGTATCTA+GGG | + | chr6_4:9810419-9810438 | Msa0975970:intron | 25.0% |
| ! | GCTAATGAATATTGTTGAAA+AGG | - | chr6_4:9810456-9810475 | None:intergenic | 25.0% |
| !! | GCACAAACTTGTAAAATTTT+AGG | - | chr6_4:9810483-9810502 | None:intergenic | 25.0% |
| ! | CAAAGCAAATCAACTATTAT+GGG | - | chr6_4:9810535-9810554 | None:intergenic | 25.0% |
| ! | ACAAAGCAAATCAACTATTA+TGG | - | chr6_4:9810536-9810555 | None:intergenic | 25.0% |
| !! | CATTTTCATTTCCAACATTA+TGG | + | chr6_4:9810628-9810647 | Msa0975970:intron | 25.0% |
| ! | CTAACTTAATTCCATAATGT+TGG | - | chr6_4:9810642-9810661 | None:intergenic | 25.0% |
| !! | GCTTACATAAAATAAGTTGA+AGG | - | chr6_4:9810936-9810955 | None:intergenic | 25.0% |
| !! | ACCAAAACAACATTTTACAA+TGG | + | chr6_4:9811137-9811156 | Msa0975970:CDS | 25.0% |
| !!! | TCCATTGTAAAATGTTGTTT+TGG | - | chr6_4:9811141-9811160 | None:intergenic | 25.0% |
| !! | AAACAACATTTTACAATGGA+AGG | + | chr6_4:9811141-9811160 | Msa0975970:CDS | 25.0% |
| ! | AGCAAAGTATACACAATAAA+AGG | + | chr6_4:9811349-9811368 | Msa0975970:CDS | 25.0% |
| !!! | CTATTTCTAATGATGATGTT+AGG | + | chr6_4:9811569-9811588 | Msa0975970:CDS | 25.0% |
| ! | TGGAAATCAAATTCTAAACA+AGG | + | chr6_4:9811610-9811629 | Msa0975970:CDS | 25.0% |
| ! | ATCAAATTCTAAACAAGGTT+TGG | + | chr6_4:9811615-9811634 | Msa0975970:CDS | 25.0% |
| ! | TCAAATTCTAAACAAGGTTT+GGG | + | chr6_4:9811616-9811635 | Msa0975970:CDS | 25.0% |
| !! | GTTCCTCAATTATCAAATTT+TGG | + | chr6_4:9811877-9811896 | Msa0975970:CDS | 25.0% |
| !!! | TATTGGTAATTGATTTGTGT+TGG | - | chr6_4:9812027-9812046 | None:intergenic | 25.0% |
| ! | AACTCAACATTTGATCATAT+TGG | - | chr6_4:9812044-9812063 | None:intergenic | 25.0% |
| ! | AGGAAAATCTTGATCTTTAT+GGG | - | chr6_4:9812160-9812179 | None:intergenic | 25.0% |
| ! | AAGGAAAATCTTGATCTTTA+TGG | - | chr6_4:9812161-9812180 | None:intergenic | 25.0% |
| !! | TATTTTGTGTATCACTTTGA+AGG | - | chr6_4:9812180-9812199 | None:intergenic | 25.0% |
| !!! | AAATGAATTTTTCAAGTGCA+TGG | + | chr6_4:9812338-9812357 | Msa0975970:three_prime_UTR | 25.0% |
| !!! | AATGAATTTTTCAAGTGCAT+GGG | + | chr6_4:9812339-9812358 | Msa0975970:three_prime_UTR | 25.0% |
| ! | TGAAAATAGAAACTTTGGTT+TGG | - | chr6_4:9810232-9810251 | None:intergenic | 25.0% |
| ! | TGGTTTGAAAATAGAAACTT+TGG | - | chr6_4:9810237-9810256 | None:intergenic | 25.0% |
| ! | TCATATATAGTACTTCTAGT+TGG | + | chr6_4:9810271-9810290 | Msa0975970:CDS | 25.0% |
| ! | TAATATGATATGAGAGAAGA+AGG | - | chr6_4:9810324-9810343 | None:intergenic | 25.0% |
| ! | GATATATATCAAATAGTGTG+TGG | + | chr6_4:9810348-9810367 | Msa0975970:intron | 25.0% |
| ! | TCCTGTATATATATGTATCT+AGG | + | chr6_4:9810418-9810437 | Msa0975970:intron | 25.0% |
| ! | CCTGTATATATATGTATCTA+GGG | + | chr6_4:9810419-9810438 | Msa0975970:intron | 25.0% |
| ! | GCTAATGAATATTGTTGAAA+AGG | - | chr6_4:9810456-9810475 | None:intergenic | 25.0% |
| !! | GCACAAACTTGTAAAATTTT+AGG | - | chr6_4:9810483-9810502 | None:intergenic | 25.0% |
| ! | CAAAGCAAATCAACTATTAT+GGG | - | chr6_4:9810535-9810554 | None:intergenic | 25.0% |
| ! | ACAAAGCAAATCAACTATTA+TGG | - | chr6_4:9810536-9810555 | None:intergenic | 25.0% |
| !! | CATTTTCATTTCCAACATTA+TGG | + | chr6_4:9810628-9810647 | Msa0975970:intron | 25.0% |
| ! | CTAACTTAATTCCATAATGT+TGG | - | chr6_4:9810642-9810661 | None:intergenic | 25.0% |
| !! | GCTTACATAAAATAAGTTGA+AGG | - | chr6_4:9810936-9810955 | None:intergenic | 25.0% |
| !! | ACCAAAACAACATTTTACAA+TGG | + | chr6_4:9811137-9811156 | Msa0975970:CDS | 25.0% |
| !!! | TCCATTGTAAAATGTTGTTT+TGG | - | chr6_4:9811141-9811160 | None:intergenic | 25.0% |
| !! | AAACAACATTTTACAATGGA+AGG | + | chr6_4:9811141-9811160 | Msa0975970:CDS | 25.0% |
| ! | AGCAAAGTATACACAATAAA+AGG | + | chr6_4:9811349-9811368 | Msa0975970:CDS | 25.0% |
| !!! | CTATTTCTAATGATGATGTT+AGG | + | chr6_4:9811569-9811588 | Msa0975970:CDS | 25.0% |
| ! | TGGAAATCAAATTCTAAACA+AGG | + | chr6_4:9811610-9811629 | Msa0975970:CDS | 25.0% |
| ! | ATCAAATTCTAAACAAGGTT+TGG | + | chr6_4:9811615-9811634 | Msa0975970:CDS | 25.0% |
| ! | TCAAATTCTAAACAAGGTTT+GGG | + | chr6_4:9811616-9811635 | Msa0975970:CDS | 25.0% |
| !! | GTTCCTCAATTATCAAATTT+TGG | + | chr6_4:9811877-9811896 | Msa0975970:CDS | 25.0% |
| !!! | TATTGGTAATTGATTTGTGT+TGG | - | chr6_4:9812027-9812046 | None:intergenic | 25.0% |
| ! | AACTCAACATTTGATCATAT+TGG | - | chr6_4:9812044-9812063 | None:intergenic | 25.0% |
| ! | AGGAAAATCTTGATCTTTAT+GGG | - | chr6_4:9812160-9812179 | None:intergenic | 25.0% |
| ! | AAGGAAAATCTTGATCTTTA+TGG | - | chr6_4:9812161-9812180 | None:intergenic | 25.0% |
| !! | TATTTTGTGTATCACTTTGA+AGG | - | chr6_4:9812180-9812199 | None:intergenic | 25.0% |
| !!! | AAATGAATTTTTCAAGTGCA+TGG | + | chr6_4:9812338-9812357 | Msa0975970:three_prime_UTR | 25.0% |
| !!! | AATGAATTTTTCAAGTGCAT+GGG | + | chr6_4:9812339-9812358 | Msa0975970:three_prime_UTR | 25.0% |
| ! | AATTTGGTGAAGAAGTAACA+AGG | - | chr6_4:9810192-9810211 | None:intergenic | 30.0% |
| CCCTAGATACATATATATAC+AGG | - | chr6_4:9810422-9810441 | None:intergenic | 30.0% | |
| TGACGATCTATTGTGATATA+AGG | + | chr6_4:9810747-9810766 | Msa0975970:intron | 30.0% | |
| TTTGGTATTCTTATCAATGG+TGG | + | chr6_4:9810995-9811014 | Msa0975970:intron | 30.0% | |
| ! | ATTTCTCTCATTGTTGTTGT+TGG | - | chr6_4:9811170-9811189 | None:intergenic | 30.0% |
| !!! | GGAAGAACTTCTTGTTTTAA+TGG | - | chr6_4:9811226-9811245 | None:intergenic | 30.0% |
| GATGTAGTTGAATCATTTGA+TGG | - | chr6_4:9811247-9811266 | None:intergenic | 30.0% | |
| TAAAAGATCCAAGAATTGTG+AGG | + | chr6_4:9811293-9811312 | Msa0975970:CDS | 30.0% | |
| AAAAGATCCAAGAATTGTGA+GGG | + | chr6_4:9811294-9811313 | Msa0975970:CDS | 30.0% | |
| ! | ATGTCTATCTTTTGTTCCAA+AGG | - | chr6_4:9811329-9811348 | None:intergenic | 30.0% |
| TAAAAGGACTAAGAGATAGA+AGG | + | chr6_4:9811365-9811384 | Msa0975970:CDS | 30.0% | |
| AAAAGGACTAAGAGATAGAA+GGG | + | chr6_4:9811366-9811385 | Msa0975970:CDS | 30.0% | |
| TATGATCTTCAAGATAGGTT+AGG | + | chr6_4:9811421-9811440 | Msa0975970:CDS | 30.0% | |
| ATGATCTTCAAGATAGGTTA+GGG | + | chr6_4:9811422-9811441 | Msa0975970:CDS | 30.0% | |
| TTGGTTGCTTAATATAGCTA+AGG | + | chr6_4:9811471-9811490 | Msa0975970:CDS | 30.0% | |
| GAAATAGTACTAGCAAAAGA+TGG | - | chr6_4:9811556-9811575 | None:intergenic | 30.0% | |
| ! | ATCATATTTGAGACATTGTC+AGG | - | chr6_4:9811769-9811788 | None:intergenic | 30.0% |
| !!! | AGCAAATCAACCTTCTTTTT+TGG | + | chr6_4:9811801-9811820 | Msa0975970:CDS | 30.0% |
| !!! | GCAAATCAACCTTCTTTTTT+GGG | + | chr6_4:9811802-9811821 | Msa0975970:CDS | 30.0% |
| TTCAACAATCCCAAAAAAGA+AGG | - | chr6_4:9811814-9811833 | None:intergenic | 30.0% | |
| !! | AAACACAATGATGATGGAAA+GGG | - | chr6_4:9811955-9811974 | None:intergenic | 30.0% |
| ! | CAATATTTTCCTTCACATGT+TGG | + | chr6_4:9811985-9812004 | Msa0975970:CDS | 30.0% |
| ! | AATTTGGTGAAGAAGTAACA+AGG | - | chr6_4:9810192-9810211 | None:intergenic | 30.0% |
| CCCTAGATACATATATATAC+AGG | - | chr6_4:9810422-9810441 | None:intergenic | 30.0% | |
| TGACGATCTATTGTGATATA+AGG | + | chr6_4:9810747-9810766 | Msa0975970:intron | 30.0% | |
| TTTGGTATTCTTATCAATGG+TGG | + | chr6_4:9810995-9811014 | Msa0975970:intron | 30.0% | |
| ! | ATTTCTCTCATTGTTGTTGT+TGG | - | chr6_4:9811170-9811189 | None:intergenic | 30.0% |
| !!! | GGAAGAACTTCTTGTTTTAA+TGG | - | chr6_4:9811226-9811245 | None:intergenic | 30.0% |
| GATGTAGTTGAATCATTTGA+TGG | - | chr6_4:9811247-9811266 | None:intergenic | 30.0% | |
| TAAAAGATCCAAGAATTGTG+AGG | + | chr6_4:9811293-9811312 | Msa0975970:CDS | 30.0% | |
| AAAAGATCCAAGAATTGTGA+GGG | + | chr6_4:9811294-9811313 | Msa0975970:CDS | 30.0% | |
| ! | ATGTCTATCTTTTGTTCCAA+AGG | - | chr6_4:9811329-9811348 | None:intergenic | 30.0% |
| TAAAAGGACTAAGAGATAGA+AGG | + | chr6_4:9811365-9811384 | Msa0975970:CDS | 30.0% | |
| AAAAGGACTAAGAGATAGAA+GGG | + | chr6_4:9811366-9811385 | Msa0975970:CDS | 30.0% | |
| TATGATCTTCAAGATAGGTT+AGG | + | chr6_4:9811421-9811440 | Msa0975970:CDS | 30.0% | |
| ATGATCTTCAAGATAGGTTA+GGG | + | chr6_4:9811422-9811441 | Msa0975970:CDS | 30.0% | |
| TTGGTTGCTTAATATAGCTA+AGG | + | chr6_4:9811471-9811490 | Msa0975970:CDS | 30.0% | |
| GAAATAGTACTAGCAAAAGA+TGG | - | chr6_4:9811556-9811575 | None:intergenic | 30.0% | |
| ! | ATCATATTTGAGACATTGTC+AGG | - | chr6_4:9811769-9811788 | None:intergenic | 30.0% |
| !!! | AGCAAATCAACCTTCTTTTT+TGG | + | chr6_4:9811801-9811820 | Msa0975970:CDS | 30.0% |
| !!! | GCAAATCAACCTTCTTTTTT+GGG | + | chr6_4:9811802-9811821 | Msa0975970:CDS | 30.0% |
| TTCAACAATCCCAAAAAAGA+AGG | - | chr6_4:9811814-9811833 | None:intergenic | 30.0% | |
| !! | AAACACAATGATGATGGAAA+GGG | - | chr6_4:9811955-9811974 | None:intergenic | 30.0% |
| ! | CAATATTTTCCTTCACATGT+TGG | + | chr6_4:9811985-9812004 | Msa0975970:CDS | 30.0% |
| ATAAAGGAATGGCAAAGAGT+TGG | - | chr6_4:9810112-9810131 | None:intergenic | 35.0% | |
| CTCTTTGCCATTCCTTTATA+CGG | + | chr6_4:9810113-9810132 | Msa0975970:CDS | 35.0% | |
| !!! | ACTTTTCTGAAGCAGATACT+AGG | + | chr6_4:9811061-9811080 | Msa0975970:intron | 35.0% |
| ! | AATGGAAATTCGGCTTCTTT+TGG | - | chr6_4:9811208-9811227 | None:intergenic | 35.0% |
| ACCTCTATGATCTTCAAGAT+AGG | + | chr6_4:9811416-9811435 | Msa0975970:CDS | 35.0% | |
| ACCTATCTTGAAGATCATAG+AGG | - | chr6_4:9811420-9811439 | None:intergenic | 35.0% | |
| AGCAAAAGATGGATAACCTA+AGG | - | chr6_4:9811545-9811564 | None:intergenic | 35.0% | |
| GGCAAAACAACACTTCAATT+TGG | + | chr6_4:9811590-9811609 | Msa0975970:CDS | 35.0% | |
| TTGGATGAATAGAAGTGAAG+AGG | + | chr6_4:9811663-9811682 | Msa0975970:CDS | 35.0% | |
| AGAGGATAAAGAGAAGAAAG+AGG | + | chr6_4:9811681-9811700 | Msa0975970:CDS | 35.0% | |
| AAATGCGGTGATAGACTATT+TGG | - | chr6_4:9811742-9811761 | None:intergenic | 35.0% | |
| ACATTGTCAGGTACTAAATG+CGG | - | chr6_4:9811757-9811776 | None:intergenic | 35.0% | |
| TCAAATATGATTATCTCCCG+TGG | + | chr6_4:9811778-9811797 | Msa0975970:CDS | 35.0% | |
| ! | TATGCCACTTGGTTATCAAT+TGG | + | chr6_4:9811837-9811856 | Msa0975970:CDS | 35.0% |
| !! | CAAACACAATGATGATGGAA+AGG | - | chr6_4:9811956-9811975 | None:intergenic | 35.0% |
| GTTGACAAACACAATGATGA+TGG | - | chr6_4:9811961-9811980 | None:intergenic | 35.0% | |
| ATAAAGGAATGGCAAAGAGT+TGG | - | chr6_4:9810112-9810131 | None:intergenic | 35.0% | |
| CTCTTTGCCATTCCTTTATA+CGG | + | chr6_4:9810113-9810132 | Msa0975970:CDS | 35.0% | |
| !!! | ACTTTTCTGAAGCAGATACT+AGG | + | chr6_4:9811061-9811080 | Msa0975970:intron | 35.0% |
| ! | AATGGAAATTCGGCTTCTTT+TGG | - | chr6_4:9811208-9811227 | None:intergenic | 35.0% |
| ACCTCTATGATCTTCAAGAT+AGG | + | chr6_4:9811416-9811435 | Msa0975970:CDS | 35.0% | |
| ACCTATCTTGAAGATCATAG+AGG | - | chr6_4:9811420-9811439 | None:intergenic | 35.0% | |
| AGCAAAAGATGGATAACCTA+AGG | - | chr6_4:9811545-9811564 | None:intergenic | 35.0% | |
| GGCAAAACAACACTTCAATT+TGG | + | chr6_4:9811590-9811609 | Msa0975970:CDS | 35.0% | |
| TTGGATGAATAGAAGTGAAG+AGG | + | chr6_4:9811663-9811682 | Msa0975970:CDS | 35.0% | |
| AGAGGATAAAGAGAAGAAAG+AGG | + | chr6_4:9811681-9811700 | Msa0975970:CDS | 35.0% | |
| AAATGCGGTGATAGACTATT+TGG | - | chr6_4:9811742-9811761 | None:intergenic | 35.0% | |
| ACATTGTCAGGTACTAAATG+CGG | - | chr6_4:9811757-9811776 | None:intergenic | 35.0% | |
| TCAAATATGATTATCTCCCG+TGG | + | chr6_4:9811778-9811797 | Msa0975970:CDS | 35.0% | |
| ! | TATGCCACTTGGTTATCAAT+TGG | + | chr6_4:9811837-9811856 | Msa0975970:CDS | 35.0% |
| !! | CAAACACAATGATGATGGAA+AGG | - | chr6_4:9811956-9811975 | None:intergenic | 35.0% |
| GTTGACAAACACAATGATGA+TGG | - | chr6_4:9811961-9811980 | None:intergenic | 35.0% | |
| GGAAAAGGAAGATGCAGAAA+TGG | - | chr6_4:9810150-9810169 | None:intergenic | 40.0% | |
| ! | TTCCTTTTCCTACTTAGCTG+CGG | + | chr6_4:9810160-9810179 | Msa0975970:CDS | 40.0% |
| TCTAGTTGGCATCAAAAGCA+AGG | + | chr6_4:9810285-9810304 | Msa0975970:CDS | 40.0% | |
| TCAAATAGTGTGTGGTAGCT+AGG | + | chr6_4:9810356-9810375 | Msa0975970:intron | 40.0% | |
| AATCAACTATTATGGGCGCA+AGG | - | chr6_4:9810528-9810547 | None:intergenic | 40.0% | |
| ! | CATAGAGGTGAATTGCTGTT+TGG | - | chr6_4:9811405-9811424 | None:intergenic | 40.0% |
| AATCAACAACCTTGCTAGGT+TGG | - | chr6_4:9811453-9811472 | None:intergenic | 40.0% | |
| AACCTAGCAAGGTTGTTGAT+TGG | + | chr6_4:9811452-9811471 | Msa0975970:CDS | 40.0% | |
| AACCAATCAACAACCTTGCT+AGG | - | chr6_4:9811457-9811476 | None:intergenic | 40.0% | |
| ! | TTTCCTTGAGGTATTTGCAG+TGG | - | chr6_4:9811517-9811536 | None:intergenic | 40.0% |
| !! | AAGAAGGTTGATTTGCTCCA+CGG | - | chr6_4:9811798-9811817 | None:intergenic | 40.0% |
| TTGTTGAACACTATGCCACT+TGG | + | chr6_4:9811826-9811845 | Msa0975970:CDS | 40.0% | |
| TGAGGAACATGACTAGATGA+AGG | - | chr6_4:9811865-9811884 | None:intergenic | 40.0% | |
| ATCCAACTCAACAACTCATG+AGG | + | chr6_4:9812088-9812107 | Msa0975970:CDS | 40.0% | |
| TCCAACTCAACAACTCATGA+GGG | + | chr6_4:9812089-9812108 | Msa0975970:CDS | 40.0% | |
| GGAAAAGGAAGATGCAGAAA+TGG | - | chr6_4:9810150-9810169 | None:intergenic | 40.0% | |
| ! | TTCCTTTTCCTACTTAGCTG+CGG | + | chr6_4:9810160-9810179 | Msa0975970:CDS | 40.0% |
| TCTAGTTGGCATCAAAAGCA+AGG | + | chr6_4:9810285-9810304 | Msa0975970:CDS | 40.0% | |
| TCAAATAGTGTGTGGTAGCT+AGG | + | chr6_4:9810356-9810375 | Msa0975970:intron | 40.0% | |
| AATCAACTATTATGGGCGCA+AGG | - | chr6_4:9810528-9810547 | None:intergenic | 40.0% | |
| ! | CATAGAGGTGAATTGCTGTT+TGG | - | chr6_4:9811405-9811424 | None:intergenic | 40.0% |
| AATCAACAACCTTGCTAGGT+TGG | - | chr6_4:9811453-9811472 | None:intergenic | 40.0% | |
| AACCTAGCAAGGTTGTTGAT+TGG | + | chr6_4:9811452-9811471 | Msa0975970:CDS | 40.0% | |
| AACCAATCAACAACCTTGCT+AGG | - | chr6_4:9811457-9811476 | None:intergenic | 40.0% | |
| ! | TTTCCTTGAGGTATTTGCAG+TGG | - | chr6_4:9811517-9811536 | None:intergenic | 40.0% |
| !! | AAGAAGGTTGATTTGCTCCA+CGG | - | chr6_4:9811798-9811817 | None:intergenic | 40.0% |
| TTGTTGAACACTATGCCACT+TGG | + | chr6_4:9811826-9811845 | Msa0975970:CDS | 40.0% | |
| TGAGGAACATGACTAGATGA+AGG | - | chr6_4:9811865-9811884 | None:intergenic | 40.0% | |
| ATCCAACTCAACAACTCATG+AGG | + | chr6_4:9812088-9812107 | Msa0975970:CDS | 40.0% | |
| TCCAACTCAACAACTCATGA+GGG | + | chr6_4:9812089-9812108 | Msa0975970:CDS | 40.0% | |
| ATTCCTTTATACGGCGTGGT+CGG | + | chr6_4:9810122-9810141 | Msa0975970:CDS | 45.0% | |
| CATCGTCAACAACATCGCAA+TGG | + | chr6_4:9811263-9811282 | Msa0975970:CDS | 45.0% | |
| CTAGACACCCTCACAATTCT+TGG | - | chr6_4:9811304-9811323 | None:intergenic | 45.0% | |
| CCTAAGGTGAAGTTTCCTTG+AGG | - | chr6_4:9811529-9811548 | None:intergenic | 45.0% | |
| CCTCAAGGAAACTTCACCTT+AGG | + | chr6_4:9811526-9811545 | Msa0975970:CDS | 45.0% | |
| !! | AGAAGGTTGATTTGCTCCAC+GGG | - | chr6_4:9811797-9811816 | None:intergenic | 45.0% |
| ! | GGCTCCAATTGATAACCAAG+TGG | - | chr6_4:9811844-9811863 | None:intergenic | 45.0% |
| ACCCTCATGAGTTGTTGAGT+TGG | - | chr6_4:9812093-9812112 | None:intergenic | 45.0% | |
| ATTCCTTTATACGGCGTGGT+CGG | + | chr6_4:9810122-9810141 | Msa0975970:CDS | 45.0% | |
| CATCGTCAACAACATCGCAA+TGG | + | chr6_4:9811263-9811282 | Msa0975970:CDS | 45.0% | |
| CTAGACACCCTCACAATTCT+TGG | - | chr6_4:9811304-9811323 | None:intergenic | 45.0% | |
| CCTAAGGTGAAGTTTCCTTG+AGG | - | chr6_4:9811529-9811548 | None:intergenic | 45.0% | |
| CCTCAAGGAAACTTCACCTT+AGG | + | chr6_4:9811526-9811545 | Msa0975970:CDS | 45.0% | |
| !! | AGAAGGTTGATTTGCTCCAC+GGG | - | chr6_4:9811797-9811816 | None:intergenic | 45.0% |
| ! | GGCTCCAATTGATAACCAAG+TGG | - | chr6_4:9811844-9811863 | None:intergenic | 45.0% |
| ACCCTCATGAGTTGTTGAGT+TGG | - | chr6_4:9812093-9812112 | None:intergenic | 45.0% | |
| !!! | ATTATTATTATTATTTTCTA+AGG | - | chr6_4:9810676-9810695 | None:intergenic | 5.0% |
| !!! | ATTATTATTATTATTTTCTA+AGG | - | chr6_4:9810676-9810695 | None:intergenic | 5.0% |
| TGCCATTCCTTTATACGGCG+TGG | + | chr6_4:9810118-9810137 | Msa0975970:CDS | 50.0% | |
| GACCACGCCGTATAAAGGAA+TGG | - | chr6_4:9810123-9810142 | None:intergenic | 50.0% | |
| GTCCGCAGCTAAGTAGGAAA+AGG | - | chr6_4:9810165-9810184 | None:intergenic | 50.0% | |
| AGGGCTAAACCAACCTAGCA+AGG | + | chr6_4:9811441-9811460 | Msa0975970:CDS | 50.0% | |
| ! | CCTTGAGGTATTTGCAGTGG+TGG | - | chr6_4:9811514-9811533 | None:intergenic | 50.0% |
| CCACCACTGCAAATACCTCA+AGG | + | chr6_4:9811511-9811530 | Msa0975970:CDS | 50.0% | |
| TCCTTCACATGTTGGAGCAG+TGG | + | chr6_4:9811993-9812012 | Msa0975970:CDS | 50.0% | |
| TCCACTGCTCCAACATGTGA+AGG | - | chr6_4:9811997-9812016 | None:intergenic | 50.0% | |
| ACATGTTGGAGCAGTGGAGA+TGG | + | chr6_4:9811999-9812018 | Msa0975970:CDS | 50.0% | |
| TGCCATTCCTTTATACGGCG+TGG | + | chr6_4:9810118-9810137 | Msa0975970:CDS | 50.0% | |
| GACCACGCCGTATAAAGGAA+TGG | - | chr6_4:9810123-9810142 | None:intergenic | 50.0% | |
| GTCCGCAGCTAAGTAGGAAA+AGG | - | chr6_4:9810165-9810184 | None:intergenic | 50.0% | |
| AGGGCTAAACCAACCTAGCA+AGG | + | chr6_4:9811441-9811460 | Msa0975970:CDS | 50.0% | |
| ! | CCTTGAGGTATTTGCAGTGG+TGG | - | chr6_4:9811514-9811533 | None:intergenic | 50.0% |
| CCACCACTGCAAATACCTCA+AGG | + | chr6_4:9811511-9811530 | Msa0975970:CDS | 50.0% | |
| TCCTTCACATGTTGGAGCAG+TGG | + | chr6_4:9811993-9812012 | Msa0975970:CDS | 50.0% | |
| TCCACTGCTCCAACATGTGA+AGG | - | chr6_4:9811997-9812016 | None:intergenic | 50.0% | |
| ACATGTTGGAGCAGTGGAGA+TGG | + | chr6_4:9811999-9812018 | Msa0975970:CDS | 50.0% | |
| GAACCGACCACGCCGTATAA+AGG | - | chr6_4:9810128-9810147 | None:intergenic | 55.0% | |
| GGTTGAGTCCGCAGCTAAGT+AGG | - | chr6_4:9810171-9810190 | None:intergenic | 55.0% | |
| !! | GTGAGGGTGTCTAGAGCCTT+TGG | + | chr6_4:9811310-9811329 | Msa0975970:CDS | 55.0% |
| GAACCGACCACGCCGTATAA+AGG | - | chr6_4:9810128-9810147 | None:intergenic | 55.0% | |
| GGTTGAGTCCGCAGCTAAGT+AGG | - | chr6_4:9810171-9810190 | None:intergenic | 55.0% | |
| !! | GTGAGGGTGTCTAGAGCCTT+TGG | + | chr6_4:9811310-9811329 | Msa0975970:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 9810094 | 9812494 | 9810094 | ID=Msa0975970;Name=Msa0975970 |
| chr6_4 | mRNA | 9810094 | 9812494 | 9810094 | ID=Msa0975970-mRNA-1;Parent=Msa0975970;Name=Msa0975970-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|0|0|2|306|441 |
| chr6_4 | exon | 9810094 | 9810306 | 9810094 | ID=Msa0975970-mRNA-1:exon:3582;Parent=Msa0975970-mRNA-1 |
| chr6_4 | exon | 9811076 | 9812494 | 9811076 | ID=Msa0975970-mRNA-1:exon:3583;Parent=Msa0975970-mRNA-1 |
| chr6_4 | CDS | 9810094 | 9810306 | 9810094 | ID=Msa0975970-mRNA-1:cds;Parent=Msa0975970-mRNA-1 |
| chr6_4 | CDS | 9811076 | 9812188 | 9811076 | ID=Msa0975970-mRNA-1:cds;Parent=Msa0975970-mRNA-1 |
| chr6_4 | three_prime_UTR | 9812189 | 9812494 | 9812189 | ID=Msa0975970-mRNA-1:three_prime_utr;Parent=Msa0975970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
