AlfalfaGEDB | Msa0090620

M. sativa cultivar zhongmu-4 / Msa0090620

KEGG: K02639
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
PFAM: PF00111.30

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0090620	XP_013470266.1	94.969	159	8	0	1	159	2	160	1.85e-106	311

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0090620	sp\|P27788\|FER3_MAIZE	65.132	152	50	3	11	159	1	152	4.59e-61	188

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0090620	A0A072VQL8	94.969	159	8	0	1	159	2	160	8.86e-107	311

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0008850	Msa0090620	-0.816357	5.766060e-52	-8.615850e-47
Msa0018870	Msa0090620	-0.810590	1.068583e-50	-8.615850e-47
Msa0039380	Msa0090620	0.805260	1.454416e-49	-8.615850e-47
Msa0043960	Msa0090620	0.994519	6.377742e-208	-8.615850e-47
Msa0044050	Msa0090620	0.982939	2.111631e-156	-8.615850e-47
Msa0047470	Msa0090620	-0.828725	7.662620e-55	-8.615850e-47
Msa0054760	Msa0090620	-0.804394	2.206533e-49	-8.615850e-47
Msa0057740	Msa0090620	-0.835818	1.344312e-56	-8.615850e-47
Msa0090620	Msa0103060	-0.844477	7.377367e-59	-8.615850e-47
Msa0090620	Msa0116950	-0.824983	6.003883e-54	-8.615850e-47
Msa0090620	Msa0129270	0.834155	3.530061e-56	-8.615850e-47
Msa0090620	Msa0133880	-0.803920	2.768910e-49	-8.615850e-47
Msa0090620	Msa0169960	-0.807642	4.574746e-50	-8.615850e-47
Msa0090620	Msa0183800	0.987971	3.183832e-172	-8.615850e-47
Msa0090620	Msa0184320	0.802546	5.329482e-49	-8.615850e-47
Msa0090620	Msa0185390	-0.817751	2.803356e-52	-8.615850e-47
Msa0090620	Msa0216560	-0.857837	1.243656e-62	-8.615850e-47
Msa0090620	Msa0222070	-0.822642	2.123984e-53	-8.615850e-47
Msa0090620	Msa0222120	-0.822843	1.906691e-53	-8.615850e-47
Msa0090620	Msa0223100	-0.832047	1.181007e-55	-8.615850e-47
Msa0090620	Msa0223290	-0.813410	2.595845e-51	-8.615850e-47
Msa0090620	Msa0223380	-0.818671	1.735649e-52	-8.615850e-47
Msa0090620	Msa0223960	-0.800286	1.547902e-48	-8.615850e-47
Msa0090620	Msa0226290	-0.808930	2.431129e-50	-8.615850e-47
Msa0090620	Msa0227290	-0.821890	3.173841e-53	-8.615850e-47
Msa0090620	Msa0251150	-0.822846	1.903864e-53	-8.615850e-47
Msa0090620	Msa0256170	-0.810991	8.753010e-51	-8.615850e-47
Msa0090620	Msa0256430	-0.822226	2.652502e-53	-8.615850e-47
Msa0090620	Msa0259330	-0.805177	1.513864e-49	-8.615850e-47
Msa0090620	Msa0263620	-0.819684	1.020686e-52	-8.615850e-47
Msa0090620	Msa0265210	-0.822902	1.846974e-53	-8.615850e-47
Msa0090620	Msa0290600	-0.803846	2.868578e-49	-8.615850e-47
Msa0090620	Msa0295840	-0.839267	1.755213e-57	-8.615850e-47
Msa0090620	Msa0301460	-0.819827	9.466600e-53	-8.615850e-47
Msa0090620	Msa0303200	-0.809272	2.053572e-50	-8.615850e-47
Msa0090620	Msa0333900	-0.809757	1.616009e-50	-8.615850e-47
Msa0090620	Msa0336270	-0.833522	5.080401e-56	-8.615850e-47
Msa0090620	Msa0338900	-0.801497	8.756588e-49	-8.615850e-47
Msa0090620	Msa0339870	-0.822672	2.089477e-53	-8.615850e-47
Msa0090620	Msa0362430	-0.809117	2.217438e-50	-8.615850e-47
Msa0090620	Msa0380430	-0.830272	3.224720e-55	-8.615850e-47
Msa0090620	Msa0389830	-0.800731	1.256197e-48	-8.615850e-47
Msa0090620	Msa0417150	-0.823414	1.403061e-53	-8.615850e-47
Msa0090620	Msa0421100	-0.826796	2.228845e-54	-8.615850e-47
Msa0090620	Msa0421800	-0.835142	1.992996e-56	-8.615850e-47
Msa0090620	Msa0423110	-0.800974	1.120225e-48	-8.615850e-47
Msa0090620	Msa0427050	-0.801942	7.097626e-49	-8.615850e-47
Msa0090620	Msa0427590	-0.828627	8.094970e-55	-8.615850e-47
Msa0090620	Msa0434630	-0.814468	1.517155e-51	-8.615850e-47
Msa0090620	Msa0456480	-0.833897	4.096552e-56	-8.615850e-47
Msa0090620	Msa0459120	-0.830247	3.269900e-55	-8.615850e-47
Msa0090620	Msa0463540	-0.825942	3.560131e-54	-8.615850e-47
Msa0090620	Msa0466830	-0.812733	3.655023e-51	-8.615850e-47
Msa0090620	Msa0467800	-0.820726	5.890146e-53	-8.615850e-47
Msa0090620	Msa0467880	-0.816123	6.504827e-52	-8.615850e-47
Msa0090620	Msa0475360	-0.800766	1.235362e-48	-8.615850e-47
Msa0090620	Msa0482020	-0.815941	7.140552e-52	-8.615850e-47
Msa0090620	Msa0482680	-0.800232	1.586956e-48	-8.615850e-47
Msa0090620	Msa0488850	-0.800201	1.610488e-48	-8.615850e-47
Msa0090620	Msa0505660	-0.817932	2.551915e-52	-8.615850e-47
Msa0090620	Msa0513660	-0.806950	6.411462e-50	-8.615850e-47
Msa0090620	Msa0514260	-0.840219	9.919985e-58	-8.615850e-47
Msa0090620	Msa0518160	-0.820043	8.446727e-53	-8.615850e-47
Msa0090620	Msa0542040	-0.823990	1.028710e-53	-8.615850e-47
Msa0090620	Msa0546380	-0.803929	2.757067e-49	-8.615850e-47
Msa0090620	Msa0552580	-0.800955	1.130207e-48	-8.615850e-47
Msa0090620	Msa0553520	-0.821586	3.731805e-53	-8.615850e-47
Msa0090620	Msa0558890	-0.820346	7.199587e-53	-8.615850e-47
Msa0090620	Msa0560180	-0.809016	2.330391e-50	-8.615850e-47
Msa0090620	Msa0568490	-0.810706	1.008697e-50	-8.615850e-47
Msa0090620	Msa0575990	0.817370	3.416049e-52	-8.615850e-47
Msa0090620	Msa0576100	0.817079	3.971565e-52	-8.615850e-47
Msa0090620	Msa0581190	-0.801190	1.012211e-48	-8.615850e-47
Msa0090620	Msa0583930	-0.817109	3.909924e-52	-8.615850e-47
Msa0090620	Msa0583940	-0.809829	1.559210e-50	-8.615850e-47
Msa0090620	Msa0595780	-0.807581	4.712951e-50	-8.615850e-47
Msa0090620	Msa0606140	-0.829081	6.282627e-55	-8.615850e-47
Msa0090620	Msa0607300	-0.806471	8.094347e-50	-8.615850e-47
Msa0090620	Msa0621890	-0.801732	7.837409e-49	-8.615850e-47
Msa0090620	Msa0638040	-0.800088	1.698137e-48	-8.615850e-47
Msa0090620	Msa0647110	-0.802406	5.694592e-49	-8.615850e-47
Msa0090620	Msa0653710	-0.809802	1.580522e-50	-8.615850e-47
Msa0090620	Msa0656270	-0.804314	2.292947e-49	-8.615850e-47
Msa0090620	Msa0660880	0.813405	2.602471e-51	-8.615850e-47
Msa0090620	Msa0698900	-0.814318	1.637436e-51	-8.615850e-47
Msa0090620	Msa0716600	0.859902	2.999295e-63	-8.615850e-47
Msa0090620	Msa0716740	0.804622	1.977767e-49	-8.615850e-47
Msa0090620	Msa0721150	-0.818493	1.904956e-52	-8.615850e-47
Msa0090620	Msa0724580	-0.815231	1.027611e-51	-8.615850e-47
Msa0090620	Msa0730180	-0.815276	1.004533e-51	-8.615850e-47
Msa0090620	Msa0736930	-0.805596	1.236650e-49	-8.615850e-47
Msa0090620	Msa0739610	-0.835427	1.688388e-56	-8.615850e-47
Msa0090620	Msa0757990	0.840572	8.022567e-58	-8.615850e-47
Msa0090620	Msa0761760	-0.824487	7.858405e-54	-8.615850e-47
Msa0090620	Msa0766880	-0.806602	7.594902e-50	-8.615850e-47
Msa0090620	Msa0775090	-0.800206	1.606744e-48	-8.615850e-47
Msa0090620	Msa0782030	-0.800457	1.428708e-48	-8.615850e-47
Msa0090620	Msa0782330	-0.800255	1.570456e-48	-8.615850e-47
Msa0090620	Msa0793060	-0.829717	4.402851e-55	-8.615850e-47
Msa0090620	Msa0799290	0.809798	1.583422e-50	-8.615850e-47
Msa0090620	Msa0804060	-0.807447	5.031407e-50	-8.615850e-47
Msa0090620	Msa0812450	-0.811915	5.512652e-51	-8.615850e-47
Msa0090620	Msa0834160	-0.801142	1.035101e-48	-8.615850e-47
Msa0090620	Msa0837510	0.810437	1.153445e-50	-8.615850e-47
Msa0090620	Msa0842240	-0.823458	1.370148e-53	-8.615850e-47
Msa0090620	Msa0851740	-0.803279	3.760073e-49	-8.615850e-47
Msa0090620	Msa0900320	-0.815944	7.129950e-52	-8.615850e-47
Msa0090620	Msa0934830	-0.819236	1.290949e-52	-8.615850e-47
Msa0090620	Msa0965960	-0.800172	1.632541e-48	-8.615850e-47
Msa0090620	Msa0967450	-0.806019	1.008071e-49	-8.615850e-47
Msa0090620	Msa0971860	-0.824087	9.761912e-54	-8.615850e-47
Msa0090620	Msa0975970	-0.802081	6.643017e-49	-8.615850e-47
Msa0090620	Msa0978000	-0.809346	1.979976e-50	-8.615850e-47
Msa0090620	Msa1000470	-0.819211	1.308112e-52	-8.615850e-47
Msa0090620	Msa1002040	-0.809295	2.030289e-50	-8.615850e-47
Msa0090620	Msa1016110	-0.836876	7.234990e-57	-8.615850e-47
Msa0090620	Msa1016130	-0.814405	1.566591e-51	-8.615850e-47
Msa0090620	Msa1033160	-0.811967	5.372264e-51	-8.615850e-47
Msa0090620	Msa1037060	0.822219	2.663231e-53	-8.615850e-47
Msa0090620	Msa1038320	-0.802825	4.667874e-49	-8.615850e-47
Msa0090620	Msa1070900	-0.812039	5.181334e-51	-8.615850e-47
Msa0090620	Msa1074630	-0.800835	1.196203e-48	-8.615850e-47
Msa0090620	Msa1077940	0.815569	8.646362e-52	-8.615850e-47
Msa0090620	Msa1079610	-0.814141	1.791949e-51	-8.615850e-47
Msa0090620	Msa1081850	-0.831552	1.565063e-55	-8.615850e-47
Msa0090620	Msa1102180	-0.814040	1.886697e-51	-8.615850e-47
Msa0090620	Msa1102200	-0.809313	2.012513e-50	-8.615850e-47
Msa0090620	Msa1111670	-0.803579	3.258578e-49	-8.615850e-47
Msa0090620	Msa1130070	-0.802548	5.323479e-49	-8.615850e-47
Msa0090620	Msa1138600	-0.834325	3.200175e-56	-8.615850e-47
Msa0090620	Msa1157920	-0.831612	1.512523e-55	-8.615850e-47
Msa0090620	Msa1161160	-0.829693	4.462081e-55	-8.615850e-47
Msa0090620	Msa1164800	0.828660	7.947152e-55	-8.615850e-47
Msa0090620	Msa1166180	-0.800507	1.395262e-48	-8.615850e-47
Msa0090620	Msa1166280	-0.801238	9.896430e-49	-8.615850e-47
Msa0090620	Msa1175590	-0.804527	2.069824e-49	-8.615850e-47
Msa0090620	Msa1199690	-0.804648	1.953066e-49	-8.615850e-47
Msa0090620	Msa1209390	-0.809364	1.962198e-50	-8.615850e-47
Msa0090620	Msa1209650	-0.811581	6.516032e-51	-8.615850e-47
Msa0090620	Msa1211390	-0.805162	1.525053e-49	-8.615850e-47
Msa0090620	Msa1214900	-0.845970	2.913506e-59	-8.615850e-47
Msa0090620	Msa1215210	-0.809704	1.659234e-50	-8.615850e-47
Msa0090620	Msa1215530	-0.803677	3.109837e-49	-8.615850e-47
Msa0090620	Msa1219780	0.831604	1.519022e-55	-8.615850e-47
Msa0090620	Msa1221570	0.802508	5.425932e-49	-8.615850e-47
Msa0090620	Msa1222030	0.805666	1.195786e-49	-8.615850e-47
Msa0090620	Msa1233770	-0.803344	3.646539e-49	-8.615850e-47
Msa0090620	Msa1235770	-0.805593	1.238810e-49	-8.615850e-47
Msa0090620	Msa1242990	-0.806444	8.202324e-50	-8.615850e-47
Msa0090620	Msa1248400	-0.805000	1.648532e-49	-8.615850e-47
Msa0090620	Msa1258100	-0.861865	7.595097e-64	-8.615850e-47
Msa0090620	Msa1266710	0.832774	7.800731e-56	-8.615850e-47
Msa0090620	Msa1276080	-0.809736	1.633158e-50	-8.615850e-47
Msa0090620	Msa1284390	-0.818366	2.034978e-52	-8.615850e-47
Msa0090620	Msa1286910	-0.803164	3.972466e-49	-8.615850e-47
Msa0090620	Msa1298740	-0.859642	3.591413e-63	-8.615850e-47
Msa0090620	Msa1306720	0.812235	4.694792e-51	-8.615850e-47
Msa0090620	Msa1325980	-0.808446	3.085056e-50	-8.615850e-47
Msa0090620	Msa1335500	0.838334	3.059620e-57	-8.615850e-47
Msa0090620	Msa1349360	-0.812295	4.556582e-51	-8.615850e-47
Msa0090620	Msa1352290	-0.812045	5.165190e-51	-8.615850e-47
Msa0090620	Msa1360380	-0.810413	1.167186e-50	-8.615850e-47
Msa0090620	Msa1367940	-0.807086	6.001744e-50	-8.615850e-47
Msa0090620	Msa1368180	-0.809924	1.487641e-50	-8.615850e-47
Msa0090620	Msa1368730	-0.820144	8.009300e-53	-8.615850e-47
Msa0090620	Msa1374810	-0.814563	1.445727e-51	-8.615850e-47
Msa0090620	Msa1381130	-0.811116	8.220842e-51	-8.615850e-47
Msa0090620	Msa1400700	0.806073	9.820919e-50	-8.615850e-47
Msa0090620	Msa1403900	-0.812102	5.020402e-51	-8.615850e-47
Msa0090620	Msa1405470	-0.805952	1.041290e-49	-8.615850e-47
Msa0090620	Msa1407210	0.829374	5.335732e-55	-8.615850e-47
Msa0090620	Msa1408190	-0.806190	9.275980e-50	-8.615850e-47
Msa0090620	Msa1423550	-0.823404	1.410972e-53	-8.615850e-47
Msa0090620	Msa1435470	-0.805100	1.570987e-49	-8.615850e-47
Msa0090620	Msa1435910	-0.809491	1.843457e-50	-8.615850e-47
Msa0090620	Msa1440180	-0.816841	4.491741e-52	-8.615850e-47
Msa0090620	Msa1448990	-0.807892	4.048361e-50	-8.615850e-47
Msa0090620	Msa1449740	-0.815166	1.062621e-51	-8.615850e-47
Msa0090620	Msa1450130	0.825709	4.043612e-54	-8.615850e-47
Msa0090620	Msa1451840	-0.811114	8.231417e-51	-8.615850e-47
Msa0090620	Msa1458920	-0.812724	3.671298e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0090620	MtrunA17_Chr1g0210631	94.969	159	8	0	1	159	60	218	6.83e-110	311
Msa0090620	MtrunA17_Chr1g0210661	90.196	153	15	0	6	158	1	153	7.88e-101	286
Msa0090620	MtrunA17_Chr2g0321501	72.727	132	35	1	29	159	24	155	2.19e-67	201
Msa0090620	MtrunA17_Chr4g0026331	65.385	156	48	3	6	159	4	155	7.21e-66	197
Msa0090620	MtrunA17_Chr2g0277481	55.102	147	60	3	17	158	3	148	5.66e-50	157
Msa0090620	MtrunA17_Chr8g0380641	55.556	144	61	3	17	158	4	146	7.22e-50	157
Msa0090620	MtrunA17_Chr5g0394481	31.757	148	96	3	11	158	1	143	1.82e-19	79.7
Msa0090620	MtrunA17_Chr4g0054691	39.535	86	52	0	74	159	74	159	1.06e-18	78.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0090620	AT2G27510.1	60.000	155	56	3	11	159	1	155	2.73e-60	184
Msa0090620	AT1G60950.1	56.209	153	56	5	11	158	1	147	6.51e-50	157
Msa0090620	AT1G10960.1	58.915	129	47	3	35	158	20	147	6.27e-47	150
Msa0090620	AT5G10000.1	52.381	126	57	2	36	158	22	147	8.15e-40	132
Msa0090620	AT4G14890.1	44.554	101	53	3	58	158	47	144	7.59e-20	81.3
Msa0090620	AT1G32550.1	39.535	86	52	0	74	159	69	154	3.95e-18	77.4
Msa0090620	AT1G32550.2	37.255	102	45	3	74	159	69	167	8.37e-13	63.5

Find 40 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAATCACAGTATCTGATTT+TGG	0.126493	1_2:+72678245	None:intergenic
TTCACAGATCTCAAACTTGA+TGG	0.324898	1_2:+72678566	None:intergenic
TTGTGCTGGCCAAGTGGTTA+CGG	0.329557	1_2:-72678348	Msa0090620:CDS
AAAGAAAGGAAACTTGTTAT+AGG	0.331567	1_2:-72678080	Msa0090620:three_prime_UTR
CCCTGATGACTCTTACATTC+TGG	0.354348	1_2:-72678432	Msa0090620:CDS
GCACCCGCTCTGCATGAATA+AGG	0.356204	1_2:+72678380	None:intergenic
GTTGCCAGTTGTTAATGATA+TGG	0.392583	1_2:-72677984	Msa0090620:three_prime_UTR
TGTGCTGGCCAAGTGGTTAC+GGG	0.411836	1_2:-72678347	Msa0090620:CDS
AAGAATGTGTCCAAAACATT+TGG	0.421132	1_2:-72678545	Msa0090620:CDS
AATTCGTTCTCTGTTCCATC+TGG	0.449513	1_2:+72678461	None:intergenic
TCCAGAATGTAAGAGTCATC+AGG	0.451621	1_2:+72678431	None:intergenic
TTGACTATGTGTCATGTAGC+TGG	0.452024	1_2:-72678157	Msa0090620:three_prime_UTR
CTTTCAACAGCTTCATTGTA+CGG	0.469663	1_2:-72678629	Msa0090620:CDS
CACACCATATCATTAACAAC+TGG	0.471108	1_2:+72677980	None:intergenic
CTGGATTCAGCTGAAGATGC+TGG	0.504908	1_2:-72678413	Msa0090620:CDS
GGTGCATGTTCTACTTGTGC+TGG	0.505031	1_2:-72678362	Msa0090620:CDS
GTATACAAAGTGAAACTGAT+TGG	0.509553	1_2:-72678485	Msa0090620:CDS
TAATGATATGGTGTGTAACT+TGG	0.510456	1_2:-72677972	Msa0090620:three_prime_UTR
CTACCTTATTCATGCAGAGC+GGG	0.513286	1_2:-72678383	Msa0090620:CDS
CGACAGAACCCGTAACCACT+TGG	0.534235	1_2:+72678339	None:intergenic
GTGAAACTGATTGGACCAGA+TGG	0.549003	1_2:-72678476	Msa0090620:CDS
TGTACGGAACAGTGCCCTCT+CGG	0.555453	1_2:-72678613	Msa0090620:CDS
CGATGAGCAGCAAATCGAGA+AGG	0.589494	1_2:-72678294	Msa0090620:CDS
CCAGAATGTAAGAGTCATCA+GGG	0.593554	1_2:+72678432	None:intergenic
TCTCACGGTGGACATATTCA+CGG	0.595716	1_2:+72678652	None:intergenic
ATCATTTAGAGTATCTGCAA+TGG	0.596293	1_2:-72678510	Msa0090620:CDS
TGGTTGTTGTGAAACTATGT+TGG	0.601901	1_2:-72678137	Msa0090620:three_prime_UTR
TTCTACTTGTGCTGGCCAAG+TGG	0.605670	1_2:-72678354	Msa0090620:CDS
TTCAGCTGAAGATGCTGGAG+TGG	0.623617	1_2:-72678408	Msa0090620:CDS
GATGAGCAGCAAATCGAGAA+GGG	0.629753	1_2:-72678293	Msa0090620:CDS
TACTGTGATTTACACACACA+AGG	0.647153	1_2:-72678234	Msa0090620:CDS
TCTCGATTTGCTGCTCATCG+AGG	0.652018	1_2:+72678297	None:intergenic
ACACATAGTCAAAACATGCA+CGG	0.652038	1_2:+72678168	None:intergenic
TGAAGCTGTTGAAAGTCTCA+CGG	0.659563	1_2:+72678637	None:intergenic
AGAGCACAAGATGTCCGAGA+GGG	0.687025	1_2:+72678599	None:intergenic
GCTACCTTATTCATGCAGAG+CGG	0.717700	1_2:-72678384	Msa0090620:CDS
TGTGATTTACACACACAAGG+AGG	0.721823	1_2:-72678231	Msa0090620:CDS
CAGAGCACAAGATGTCCGAG+AGG	0.730685	1_2:+72678598	None:intergenic
CAGAATGTAAGAGTCATCAG+GGG	0.754480	1_2:+72678433	None:intergenic
AGCTGTTGAAAGTCTCACGG+TGG	0.759008	1_2:+72678640	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTATTTTAATTGATTCAA+TGG	-	chr1_2:72678326-72678345	Msa0090620:CDS	10.0%
!!!	AATTGTAAAACATTTTTATA+AGG	+	chr1_2:72678692-72678711	None:intergenic	10.0%
!!!	TTTTTTTTTTTTTTTTGGAA+TGG	+	chr1_2:72679185-72679204	None:intergenic	10.0%
!!!	ACAAGTTTTTTTTTTTTTTT+TGG	+	chr1_2:72679190-72679209	None:intergenic	10.0%
!!	AAAAAAAAAAAAAAAACTTG+TGG	-	chr1_2:72679189-72679208	Msa0090620:intron	10.0%
!!!	ATCTATATTTATTTTTATTC+AGG	-	chr1_2:72679328-72679347	Msa0090620:intron	10.0%
!!!	AATTATTTTAATTGATTCAA+TGG	-	chr1_2:72678326-72678345	Msa0090620:CDS	10.0%
!!!	AATTGTAAAACATTTTTATA+AGG	+	chr1_2:72678692-72678711	None:intergenic	10.0%
!!!	TTTTTTTTTTTTTTTTGGAA+TGG	+	chr1_2:72679185-72679204	None:intergenic	10.0%
!!!	ACAAGTTTTTTTTTTTTTTT+TGG	+	chr1_2:72679190-72679209	None:intergenic	10.0%
!!	AAAAAAAAAAAAAAAACTTG+TGG	-	chr1_2:72679189-72679208	Msa0090620:intron	10.0%
!!!	ATCTATATTTATTTTTATTC+AGG	-	chr1_2:72679328-72679347	Msa0090620:intron	10.0%
!!	ATAAATATCATTATGATGAT+GGG	-	chr1_2:72678859-72678878	Msa0090620:intron	15.0%
!!!	TTTTCTATAATTACTATTAC+TGG	-	chr1_2:72679971-72679990	Msa0090620:intron	15.0%
!!	ATAAATATCATTATGATGAT+GGG	-	chr1_2:72678859-72678878	Msa0090620:intron	15.0%
!!!	TTTTCTATAATTACTATTAC+TGG	-	chr1_2:72679971-72679990	Msa0090620:intron	15.0%
!!	AATAACATAGGTTATAAACT+TGG	+	chr1_2:72678367-72678386	None:intergenic	20.0%
!!!	TGGTGTTTTTTTGTTTTTTT+TGG	-	chr1_2:72678470-72678489	Msa0090620:CDS	20.0%
!!!	TGTAAAACATTTTTATAAGG+AGG	+	chr1_2:72678689-72678708	None:intergenic	20.0%
!!	CATAAATATCATTATGATGA+TGG	-	chr1_2:72678858-72678877	Msa0090620:intron	20.0%
!!	TATATAAATAACCTCCAAAA+CGG	+	chr1_2:72679152-72679171	None:intergenic	20.0%
!!!	TCATTTTAGGAAATAAAGAA+AGG	-	chr1_2:72679923-72679942	Msa0090620:intron	20.0%
!!	AATAACATAGGTTATAAACT+TGG	+	chr1_2:72678367-72678386	None:intergenic	20.0%
!!!	TGGTGTTTTTTTGTTTTTTT+TGG	-	chr1_2:72678470-72678489	Msa0090620:CDS	20.0%
!!!	TGTAAAACATTTTTATAAGG+AGG	+	chr1_2:72678689-72678708	None:intergenic	20.0%
!!	CATAAATATCATTATGATGA+TGG	-	chr1_2:72678858-72678877	Msa0090620:intron	20.0%
!!	TATATAAATAACCTCCAAAA+CGG	+	chr1_2:72679152-72679171	None:intergenic	20.0%
!!!	TCATTTTAGGAAATAAAGAA+AGG	-	chr1_2:72679923-72679942	Msa0090620:intron	20.0%
!	GTGAATCAATCATTTGATTA+TGG	-	chr1_2:72677973-72677992	Msa0090620:three_prime_UTR	25.0%
!	TCATTTGATTATGGAAATGA+TGG	-	chr1_2:72677982-72678001	Msa0090620:three_prime_UTR	25.0%
!!!	TCGTCGTAGTTTTTTATATA+AGG	-	chr1_2:72678017-72678036	Msa0090620:three_prime_UTR	25.0%
!	TAGAAAAAGAGATAAGACAA+TGG	-	chr1_2:72678130-72678149	Msa0090620:three_prime_UTR	25.0%
!	ATGAGAGAATGAAATAACAT+AGG	+	chr1_2:72678379-72678398	None:intergenic	25.0%
!	GTAAAAATACAGTATAGCTA+AGG	+	chr1_2:72678543-72678562	None:intergenic	25.0%
!	AATCAGATAAGTACCAAATA+CGG	+	chr1_2:72678567-72678586	None:intergenic	25.0%
!	TGTATCTTATTAACAATCAC+TGG	+	chr1_2:72678590-72678609	None:intergenic	25.0%
!!!	AACTTTTTTGTCAACTTCTA+CGG	+	chr1_2:72678715-72678734	None:intergenic	25.0%
!	GTTAATACTTAAAGCTAAGT+AGG	-	chr1_2:72678732-72678751	Msa0090620:intron	25.0%
!	AAAGGCAATTTAAAGAATCA+AGG	+	chr1_2:72678920-72678939	None:intergenic	25.0%
!	AAAGAAATCATGTGTATCAA+AGG	+	chr1_2:72678938-72678957	None:intergenic	25.0%
!!!	TCTATTCTTGTGTTTTGTTA+TGG	-	chr1_2:72678973-72678992	Msa0090620:intron	25.0%
!	ATCAAAAGAAAAACTTGTGT+AGG	-	chr1_2:72679016-72679035	Msa0090620:intron	25.0%
!!	TTTTATCCTCTATGTGTATT+TGG	-	chr1_2:72679051-72679070	Msa0090620:intron	25.0%
!	TAAAAACCAAATACACATAG+AGG	+	chr1_2:72679060-72679079	None:intergenic	25.0%
!	AATTTCTTGTAAGAACTTTC+AGG	-	chr1_2:72679217-72679236	Msa0090620:intron	25.0%
!	ATTTCTTGTAAGAACTTTCA+GGG	-	chr1_2:72679218-72679237	Msa0090620:intron	25.0%
!!!	AGATTTTAGTCCAAATGTTT+TGG	+	chr1_2:72679485-72679504	None:intergenic	25.0%
!!	AAATCACAGTATCTGATTTT+GGG	+	chr1_2:72679774-72679793	None:intergenic	25.0%
!!	TAAATCACAGTATCTGATTT+TGG	+	chr1_2:72679775-72679794	None:intergenic	25.0%
!!	GTAACTTACTGAATCATTTT+AGG	-	chr1_2:72679910-72679929	Msa0090620:intron	25.0%
!!!	AAAGAAAGGAAACTTGTTAT+AGG	-	chr1_2:72679937-72679956	Msa0090620:intron	25.0%
!	GTGAATCAATCATTTGATTA+TGG	-	chr1_2:72677973-72677992	Msa0090620:three_prime_UTR	25.0%
!	TCATTTGATTATGGAAATGA+TGG	-	chr1_2:72677982-72678001	Msa0090620:three_prime_UTR	25.0%
!!!	TCGTCGTAGTTTTTTATATA+AGG	-	chr1_2:72678017-72678036	Msa0090620:three_prime_UTR	25.0%
!	TAGAAAAAGAGATAAGACAA+TGG	-	chr1_2:72678130-72678149	Msa0090620:three_prime_UTR	25.0%
!	ATGAGAGAATGAAATAACAT+AGG	+	chr1_2:72678379-72678398	None:intergenic	25.0%
!	GTAAAAATACAGTATAGCTA+AGG	+	chr1_2:72678543-72678562	None:intergenic	25.0%
!	AATCAGATAAGTACCAAATA+CGG	+	chr1_2:72678567-72678586	None:intergenic	25.0%
!	TGTATCTTATTAACAATCAC+TGG	+	chr1_2:72678590-72678609	None:intergenic	25.0%
!!!	AACTTTTTTGTCAACTTCTA+CGG	+	chr1_2:72678715-72678734	None:intergenic	25.0%
!	GTTAATACTTAAAGCTAAGT+AGG	-	chr1_2:72678732-72678751	Msa0090620:intron	25.0%
!	AAAGGCAATTTAAAGAATCA+AGG	+	chr1_2:72678920-72678939	None:intergenic	25.0%
!	AAAGAAATCATGTGTATCAA+AGG	+	chr1_2:72678938-72678957	None:intergenic	25.0%
!!!	TCTATTCTTGTGTTTTGTTA+TGG	-	chr1_2:72678973-72678992	Msa0090620:intron	25.0%
!	ATCAAAAGAAAAACTTGTGT+AGG	-	chr1_2:72679016-72679035	Msa0090620:intron	25.0%
!!	TTTTATCCTCTATGTGTATT+TGG	-	chr1_2:72679051-72679070	Msa0090620:intron	25.0%
!	TAAAAACCAAATACACATAG+AGG	+	chr1_2:72679060-72679079	None:intergenic	25.0%
!	AATTTCTTGTAAGAACTTTC+AGG	-	chr1_2:72679217-72679236	Msa0090620:intron	25.0%
!	ATTTCTTGTAAGAACTTTCA+GGG	-	chr1_2:72679218-72679237	Msa0090620:intron	25.0%
!!!	AGATTTTAGTCCAAATGTTT+TGG	+	chr1_2:72679485-72679504	None:intergenic	25.0%
!!	AAATCACAGTATCTGATTTT+GGG	+	chr1_2:72679774-72679793	None:intergenic	25.0%
!!	TAAATCACAGTATCTGATTT+TGG	+	chr1_2:72679775-72679794	None:intergenic	25.0%
!!	GTAACTTACTGAATCATTTT+AGG	-	chr1_2:72679910-72679929	Msa0090620:intron	25.0%
!!!	AAAGAAAGGAAACTTGTTAT+AGG	-	chr1_2:72679937-72679956	Msa0090620:intron	25.0%
	AAGATAAAAGGGAAATGGAA+AGG	+	chr1_2:72678073-72678092	None:intergenic	30.0%
!	TAATTGATTCAATGGTACAC+TGG	-	chr1_2:72678334-72678353	Msa0090620:CDS	30.0%
	TATTTCATTCTCTCATCCTA+TGG	-	chr1_2:72678383-72678402	Msa0090620:CDS	30.0%
!!!	CTATGGTACTTTTTTTGACT+GGG	-	chr1_2:72678400-72678419	Msa0090620:CDS	30.0%
!!!	TATGGTACTTTTTTTGACTG+GGG	-	chr1_2:72678401-72678420	Msa0090620:CDS	30.0%
!!	CTGTATTTTTACACCGTATT+TGG	-	chr1_2:72678551-72678570	Msa0090620:CDS	30.0%
	TTTATCCACTTCAGGAATTA+GGG	+	chr1_2:72678633-72678652	None:intergenic	30.0%
!	TTTTATCCACTTCAGGAATT+AGG	+	chr1_2:72678634-72678653	None:intergenic	30.0%
	TAATTCCTGAAGTGGATAAA+AGG	-	chr1_2:72678633-72678652	Msa0090620:CDS	30.0%
	AATTCCTGAAGTGGATAAAA+GGG	-	chr1_2:72678634-72678653	Msa0090620:CDS	30.0%
	TTTCTTGTAAGAACTTTCAG+GGG	-	chr1_2:72679219-72679238	Msa0090620:intron	30.0%
	AAGAATGTGTCCAAAACATT+TGG	-	chr1_2:72679472-72679491	Msa0090620:intron	30.0%
!	ATCATTTAGAGTATCTGCAA+TGG	-	chr1_2:72679507-72679526	Msa0090620:intron	30.0%
	GTATACAAAGTGAAACTGAT+TGG	-	chr1_2:72679532-72679551	Msa0090620:intron	30.0%
	TAATGATATGGTGTGTAACT+TGG	-	chr1_2:72680045-72680064	Msa0090620:intron	30.0%
!	AATGATTGATTCACTTTCCA+TGG	+	chr1_2:72677967-72677986	None:intergenic	30.0%
	AAGATAAAAGGGAAATGGAA+AGG	+	chr1_2:72678073-72678092	None:intergenic	30.0%
!	TAATTGATTCAATGGTACAC+TGG	-	chr1_2:72678334-72678353	Msa0090620:CDS	30.0%
	TATTTCATTCTCTCATCCTA+TGG	-	chr1_2:72678383-72678402	Msa0090620:CDS	30.0%
!!!	CTATGGTACTTTTTTTGACT+GGG	-	chr1_2:72678400-72678419	Msa0090620:CDS	30.0%
!!!	TATGGTACTTTTTTTGACTG+GGG	-	chr1_2:72678401-72678420	Msa0090620:CDS	30.0%
!!	CTGTATTTTTACACCGTATT+TGG	-	chr1_2:72678551-72678570	Msa0090620:CDS	30.0%
	TTTATCCACTTCAGGAATTA+GGG	+	chr1_2:72678633-72678652	None:intergenic	30.0%
!	TTTTATCCACTTCAGGAATT+AGG	+	chr1_2:72678634-72678653	None:intergenic	30.0%
	TAATTCCTGAAGTGGATAAA+AGG	-	chr1_2:72678633-72678652	Msa0090620:CDS	30.0%
	AATTCCTGAAGTGGATAAAA+GGG	-	chr1_2:72678634-72678653	Msa0090620:CDS	30.0%
	TTTCTTGTAAGAACTTTCAG+GGG	-	chr1_2:72679219-72679238	Msa0090620:intron	30.0%
	AAGAATGTGTCCAAAACATT+TGG	-	chr1_2:72679472-72679491	Msa0090620:intron	30.0%
!	ATCATTTAGAGTATCTGCAA+TGG	-	chr1_2:72679507-72679526	Msa0090620:intron	30.0%
	GTATACAAAGTGAAACTGAT+TGG	-	chr1_2:72679532-72679551	Msa0090620:intron	30.0%
	TAATGATATGGTGTGTAACT+TGG	-	chr1_2:72680045-72680064	Msa0090620:intron	30.0%
	CAGTGAAGATAAAAGGGAAA+TGG	+	chr1_2:72678078-72678097	None:intergenic	35.0%
	ACCTCACAGTGAAGATAAAA+GGG	+	chr1_2:72678084-72678103	None:intergenic	35.0%
	AACCTCACAGTGAAGATAAA+AGG	+	chr1_2:72678085-72678104	None:intergenic	35.0%
	AAGACAATGGCGTAAATTGA+AGG	-	chr1_2:72678143-72678162	Msa0090620:three_prime_UTR	35.0%
	AATGGCGTAAATTGAAGGTA+AGG	-	chr1_2:72678148-72678167	Msa0090620:three_prime_UTR	35.0%
	AGAACAAGGATGGTTTAGTA+GGG	-	chr1_2:72678225-72678244	Msa0090620:CDS	35.0%
!!	CCAGTCAAAAAAAGTACCAT+AGG	+	chr1_2:72678402-72678421	None:intergenic	35.0%
!!!	CCTATGGTACTTTTTTTGAC+TGG	-	chr1_2:72678399-72678418	Msa0090620:CDS	35.0%
!	ATGTATTTTACCGATACTGC+TGG	-	chr1_2:72678450-72678469	Msa0090620:CDS	35.0%
	CAAAAAAACACCAGCAGTAT+CGG	+	chr1_2:72678463-72678482	None:intergenic	35.0%
	AAGATACAACTTCTGACAAC+CGG	-	chr1_2:72678602-72678621	Msa0090620:CDS	35.0%
!	TTTTCCCTTTTATCCACTTC+AGG	+	chr1_2:72678641-72678660	None:intergenic	35.0%
!!	TTCTTGTGTTTTGTTATGGC+TGG	-	chr1_2:72678977-72678996	Msa0090620:intron	35.0%
!	TATGGCTGGATTTGCTTATT+TGG	-	chr1_2:72678991-72679010	Msa0090620:intron	35.0%
!	ATGGCTGGATTTGCTTATTT+GGG	-	chr1_2:72678992-72679011	Msa0090620:intron	35.0%
	GAAAAACTTGTGTAGGATTG+TGG	-	chr1_2:72679023-72679042	Msa0090620:intron	35.0%
	TAAATAACCTCCAAAACGGA+TGG	+	chr1_2:72679148-72679167	None:intergenic	35.0%
	CTTTCAACAGCTTCATTGTA+CGG	-	chr1_2:72679388-72679407	Msa0090620:intron	35.0%
	TTCACAGATCTCAAACTTGA+TGG	+	chr1_2:72679454-72679473	None:intergenic	35.0%
	TACTGTGATTTACACACACA+AGG	-	chr1_2:72679783-72679802	Msa0090620:intron	35.0%
	ACACATAGTCAAAACATGCA+CGG	+	chr1_2:72679852-72679871	None:intergenic	35.0%
	TGGTTGTTGTGAAACTATGT+TGG	-	chr1_2:72679880-72679899	Msa0090620:intron	35.0%
	GTTGCCAGTTGTTAATGATA+TGG	-	chr1_2:72680033-72680052	Msa0090620:intron	35.0%
	CACACCATATCATTAACAAC+TGG	+	chr1_2:72680040-72680059	None:intergenic	35.0%
	CAGTGAAGATAAAAGGGAAA+TGG	+	chr1_2:72678078-72678097	None:intergenic	35.0%
	ACCTCACAGTGAAGATAAAA+GGG	+	chr1_2:72678084-72678103	None:intergenic	35.0%
	AACCTCACAGTGAAGATAAA+AGG	+	chr1_2:72678085-72678104	None:intergenic	35.0%
	AAGACAATGGCGTAAATTGA+AGG	-	chr1_2:72678143-72678162	Msa0090620:three_prime_UTR	35.0%
	AATGGCGTAAATTGAAGGTA+AGG	-	chr1_2:72678148-72678167	Msa0090620:three_prime_UTR	35.0%
	AGAACAAGGATGGTTTAGTA+GGG	-	chr1_2:72678225-72678244	Msa0090620:CDS	35.0%
!!	CCAGTCAAAAAAAGTACCAT+AGG	+	chr1_2:72678402-72678421	None:intergenic	35.0%
!!!	CCTATGGTACTTTTTTTGAC+TGG	-	chr1_2:72678399-72678418	Msa0090620:CDS	35.0%
!	ATGTATTTTACCGATACTGC+TGG	-	chr1_2:72678450-72678469	Msa0090620:CDS	35.0%
	CAAAAAAACACCAGCAGTAT+CGG	+	chr1_2:72678463-72678482	None:intergenic	35.0%
	AAGATACAACTTCTGACAAC+CGG	-	chr1_2:72678602-72678621	Msa0090620:CDS	35.0%
!	TTTTCCCTTTTATCCACTTC+AGG	+	chr1_2:72678641-72678660	None:intergenic	35.0%
!!	TTCTTGTGTTTTGTTATGGC+TGG	-	chr1_2:72678977-72678996	Msa0090620:intron	35.0%
!	TATGGCTGGATTTGCTTATT+TGG	-	chr1_2:72678991-72679010	Msa0090620:intron	35.0%
!	ATGGCTGGATTTGCTTATTT+GGG	-	chr1_2:72678992-72679011	Msa0090620:intron	35.0%
	GAAAAACTTGTGTAGGATTG+TGG	-	chr1_2:72679023-72679042	Msa0090620:intron	35.0%
	TAAATAACCTCCAAAACGGA+TGG	+	chr1_2:72679148-72679167	None:intergenic	35.0%
	CTTTCAACAGCTTCATTGTA+CGG	-	chr1_2:72679388-72679407	Msa0090620:intron	35.0%
	TTCACAGATCTCAAACTTGA+TGG	+	chr1_2:72679454-72679473	None:intergenic	35.0%
	TACTGTGATTTACACACACA+AGG	-	chr1_2:72679783-72679802	Msa0090620:intron	35.0%
	ACACATAGTCAAAACATGCA+CGG	+	chr1_2:72679852-72679871	None:intergenic	35.0%
	TGGTTGTTGTGAAACTATGT+TGG	-	chr1_2:72679880-72679899	Msa0090620:intron	35.0%
	GTTGCCAGTTGTTAATGATA+TGG	-	chr1_2:72680033-72680052	Msa0090620:intron	35.0%
	CACACCATATCATTAACAAC+TGG	+	chr1_2:72680040-72680059	None:intergenic	35.0%
!	TCCCTTTTATCTTCACTGTG+AGG	-	chr1_2:72678080-72678099	Msa0090620:three_prime_UTR	40.0%
	ATCTTCACTGTGAGGTTTGT+AGG	-	chr1_2:72678088-72678107	Msa0090620:three_prime_UTR	40.0%
	TCTTCACTGTGAGGTTTGTA+GGG	-	chr1_2:72678089-72678108	Msa0090620:three_prime_UTR	40.0%
	CAAGTGGTTCATAGAGAACA+AGG	-	chr1_2:72678211-72678230	Msa0090620:exon	40.0%
	TGGTTCATAGAGAACAAGGA+TGG	-	chr1_2:72678215-72678234	Msa0090620:exon	40.0%
	GAGAACAAGGATGGTTTAGT+AGG	-	chr1_2:72678224-72678243	Msa0090620:CDS	40.0%
	GAACAAGGATGGTTTAGTAG+GGG	-	chr1_2:72678226-72678245	Msa0090620:CDS	40.0%
	AGTAGGGGAAGAGATAAACA+AGG	-	chr1_2:72678241-72678260	Msa0090620:CDS	40.0%
	AGAGATAAACAAGGAGGGAT+TGG	-	chr1_2:72678250-72678269	Msa0090620:CDS	40.0%
	GAGATAAACAAGGAGGGATT+GGG	-	chr1_2:72678251-72678270	Msa0090620:CDS	40.0%
	ATTCAATGGTACACTGGTGA+GGG	-	chr1_2:72678340-72678359	Msa0090620:CDS	40.0%
	AGTGATGCAAAGAAAACCTG+AGG	-	chr1_2:72678758-72678777	Msa0090620:intron	40.0%
	GTGATGCAAAGAAAACCTGA+GGG	-	chr1_2:72678759-72678778	Msa0090620:intron	40.0%
	CATGCACAATGACTTACAAG+TGG	+	chr1_2:72678885-72678904	None:intergenic	40.0%
!	TGGCTGGATTTGCTTATTTG+GGG	-	chr1_2:72678993-72679012	Msa0090620:intron	40.0%
!	GTACTTGATTCCATCCGTTT+TGG	-	chr1_2:72679135-72679154	Msa0090620:intron	40.0%
	TGAAGCTGTTGAAAGTCTCA+CGG	+	chr1_2:72679383-72679402	None:intergenic	40.0%
	AATTCGTTCTCTGTTCCATC+TGG	+	chr1_2:72679559-72679578	None:intergenic	40.0%
	CAGAATGTAAGAGTCATCAG+GGG	+	chr1_2:72679587-72679606	None:intergenic	40.0%
	CCAGAATGTAAGAGTCATCA+GGG	+	chr1_2:72679588-72679607	None:intergenic	40.0%
	TCCAGAATGTAAGAGTCATC+AGG	+	chr1_2:72679589-72679608	None:intergenic	40.0%
	TGTGATTTACACACACAAGG+AGG	-	chr1_2:72679786-72679805	Msa0090620:intron	40.0%
	TTGACTATGTGTCATGTAGC+TGG	-	chr1_2:72679860-72679879	Msa0090620:intron	40.0%
!	TCCCTTTTATCTTCACTGTG+AGG	-	chr1_2:72678080-72678099	Msa0090620:three_prime_UTR	40.0%
	ATCTTCACTGTGAGGTTTGT+AGG	-	chr1_2:72678088-72678107	Msa0090620:three_prime_UTR	40.0%
	TCTTCACTGTGAGGTTTGTA+GGG	-	chr1_2:72678089-72678108	Msa0090620:three_prime_UTR	40.0%
	CAAGTGGTTCATAGAGAACA+AGG	-	chr1_2:72678211-72678230	Msa0090620:exon	40.0%
	TGGTTCATAGAGAACAAGGA+TGG	-	chr1_2:72678215-72678234	Msa0090620:exon	40.0%
	GAGAACAAGGATGGTTTAGT+AGG	-	chr1_2:72678224-72678243	Msa0090620:CDS	40.0%
	GAACAAGGATGGTTTAGTAG+GGG	-	chr1_2:72678226-72678245	Msa0090620:CDS	40.0%
	AGTAGGGGAAGAGATAAACA+AGG	-	chr1_2:72678241-72678260	Msa0090620:CDS	40.0%
	AGAGATAAACAAGGAGGGAT+TGG	-	chr1_2:72678250-72678269	Msa0090620:CDS	40.0%
	GAGATAAACAAGGAGGGATT+GGG	-	chr1_2:72678251-72678270	Msa0090620:CDS	40.0%
	ATTCAATGGTACACTGGTGA+GGG	-	chr1_2:72678340-72678359	Msa0090620:CDS	40.0%
	AGTGATGCAAAGAAAACCTG+AGG	-	chr1_2:72678758-72678777	Msa0090620:intron	40.0%
	GTGATGCAAAGAAAACCTGA+GGG	-	chr1_2:72678759-72678778	Msa0090620:intron	40.0%
	CATGCACAATGACTTACAAG+TGG	+	chr1_2:72678885-72678904	None:intergenic	40.0%
!	TGGCTGGATTTGCTTATTTG+GGG	-	chr1_2:72678993-72679012	Msa0090620:intron	40.0%
!	GTACTTGATTCCATCCGTTT+TGG	-	chr1_2:72679135-72679154	Msa0090620:intron	40.0%
	TGAAGCTGTTGAAAGTCTCA+CGG	+	chr1_2:72679383-72679402	None:intergenic	40.0%
	AATTCGTTCTCTGTTCCATC+TGG	+	chr1_2:72679559-72679578	None:intergenic	40.0%
	CAGAATGTAAGAGTCATCAG+GGG	+	chr1_2:72679587-72679606	None:intergenic	40.0%
	CCAGAATGTAAGAGTCATCA+GGG	+	chr1_2:72679588-72679607	None:intergenic	40.0%
	TCCAGAATGTAAGAGTCATC+AGG	+	chr1_2:72679589-72679608	None:intergenic	40.0%
	TGTGATTTACACACACAAGG+AGG	-	chr1_2:72679786-72679805	Msa0090620:intron	40.0%
	TTGACTATGTGTCATGTAGC+TGG	-	chr1_2:72679860-72679879	Msa0090620:intron	40.0%
	AGACATGTTGAGTCTGCAAG+TGG	-	chr1_2:72678195-72678214	Msa0090620:three_prime_UTR	45.0%
	AGGGGAAGAGATAAACAAGG+AGG	-	chr1_2:72678244-72678263	Msa0090620:CDS	45.0%
	GGGGAAGAGATAAACAAGGA+GGG	-	chr1_2:72678245-72678264	Msa0090620:CDS	45.0%
	GATTCAATGGTACACTGGTG+AGG	-	chr1_2:72678339-72678358	Msa0090620:CDS	45.0%
!!	TTTTGACTGGGGTAGAAGAG+TGG	-	chr1_2:72678412-72678431	Msa0090620:CDS	45.0%
	TTCAGGAATTAGGGTGACTC+CGG	+	chr1_2:72678624-72678643	None:intergenic	45.0%
	AGTCACCCTAATTCCTGAAG+TGG	-	chr1_2:72678625-72678644	Msa0090620:CDS	45.0%
	CTAAGCAATTTCGTACCCTC+AGG	+	chr1_2:72678777-72678796	None:intergenic	45.0%
!	CTGAGGGTACGAAATTGCTT+AGG	-	chr1_2:72678775-72678794	Msa0090620:intron	45.0%
	GTACAACATCCTTGAGCACA+AGG	+	chr1_2:72679119-72679138	None:intergenic	45.0%
!	CTTGATTCCATCCGTTTTGG+AGG	-	chr1_2:72679138-72679157	Msa0090620:intron	45.0%
	TCTCACGGTGGACATATTCA+CGG	+	chr1_2:72679368-72679387	None:intergenic	45.0%
	GTGAAACTGATTGGACCAGA+TGG	-	chr1_2:72679541-72679560	Msa0090620:intron	45.0%
	CCCTGATGACTCTTACATTC+TGG	-	chr1_2:72679585-72679604	Msa0090620:intron	45.0%
	GCTACCTTATTCATGCAGAG+CGG	-	chr1_2:72679633-72679652	Msa0090620:intron	45.0%
	CTACCTTATTCATGCAGAGC+GGG	-	chr1_2:72679634-72679653	Msa0090620:intron	45.0%
	GATGAGCAGCAAATCGAGAA+GGG	-	chr1_2:72679724-72679743	Msa0090620:intron	45.0%
	AGACATGTTGAGTCTGCAAG+TGG	-	chr1_2:72678195-72678214	Msa0090620:three_prime_UTR	45.0%
	AGGGGAAGAGATAAACAAGG+AGG	-	chr1_2:72678244-72678263	Msa0090620:CDS	45.0%
	GGGGAAGAGATAAACAAGGA+GGG	-	chr1_2:72678245-72678264	Msa0090620:CDS	45.0%
	GATTCAATGGTACACTGGTG+AGG	-	chr1_2:72678339-72678358	Msa0090620:CDS	45.0%
!!	TTTTGACTGGGGTAGAAGAG+TGG	-	chr1_2:72678412-72678431	Msa0090620:CDS	45.0%
	TTCAGGAATTAGGGTGACTC+CGG	+	chr1_2:72678624-72678643	None:intergenic	45.0%
	AGTCACCCTAATTCCTGAAG+TGG	-	chr1_2:72678625-72678644	Msa0090620:CDS	45.0%
	CTAAGCAATTTCGTACCCTC+AGG	+	chr1_2:72678777-72678796	None:intergenic	45.0%
!	CTGAGGGTACGAAATTGCTT+AGG	-	chr1_2:72678775-72678794	Msa0090620:intron	45.0%
	GTACAACATCCTTGAGCACA+AGG	+	chr1_2:72679119-72679138	None:intergenic	45.0%
!	CTTGATTCCATCCGTTTTGG+AGG	-	chr1_2:72679138-72679157	Msa0090620:intron	45.0%
	TCTCACGGTGGACATATTCA+CGG	+	chr1_2:72679368-72679387	None:intergenic	45.0%
	GTGAAACTGATTGGACCAGA+TGG	-	chr1_2:72679541-72679560	Msa0090620:intron	45.0%
	CCCTGATGACTCTTACATTC+TGG	-	chr1_2:72679585-72679604	Msa0090620:intron	45.0%
	GCTACCTTATTCATGCAGAG+CGG	-	chr1_2:72679633-72679652	Msa0090620:intron	45.0%
	CTACCTTATTCATGCAGAGC+GGG	-	chr1_2:72679634-72679653	Msa0090620:intron	45.0%
	GATGAGCAGCAAATCGAGAA+GGG	-	chr1_2:72679724-72679743	Msa0090620:intron	45.0%
	AACAAGGAGGGATTGGGTGA+AGG	-	chr1_2:72678257-72678276	Msa0090620:CDS	50.0%
	TCGAGTACTCCTTGTGCTCA+AGG	-	chr1_2:72679107-72679126	Msa0090620:intron	50.0%
	AGCTGTTGAAAGTCTCACGG+TGG	+	chr1_2:72679380-72679399	None:intergenic	50.0%
	AGAGCACAAGATGTCCGAGA+GGG	+	chr1_2:72679421-72679440	None:intergenic	50.0%
	CTGGATTCAGCTGAAGATGC+TGG	-	chr1_2:72679604-72679623	Msa0090620:intron	50.0%
	TTCAGCTGAAGATGCTGGAG+TGG	-	chr1_2:72679609-72679628	Msa0090620:intron	50.0%
	GGTGCATGTTCTACTTGTGC+TGG	-	chr1_2:72679655-72679674	Msa0090620:intron	50.0%
!	TTCTACTTGTGCTGGCCAAG+TGG	-	chr1_2:72679663-72679682	Msa0090620:intron	50.0%
!	TTGTGCTGGCCAAGTGGTTA+CGG	-	chr1_2:72679669-72679688	Msa0090620:intron	50.0%
!!	TCTCGATTTGCTGCTCATCG+AGG	+	chr1_2:72679723-72679742	None:intergenic	50.0%
	CGATGAGCAGCAAATCGAGA+AGG	-	chr1_2:72679723-72679742	Msa0090620:intron	50.0%
	AACAAGGAGGGATTGGGTGA+AGG	-	chr1_2:72678257-72678276	Msa0090620:CDS	50.0%
	TCGAGTACTCCTTGTGCTCA+AGG	-	chr1_2:72679107-72679126	Msa0090620:intron	50.0%
	AGCTGTTGAAAGTCTCACGG+TGG	+	chr1_2:72679380-72679399	None:intergenic	50.0%
	AGAGCACAAGATGTCCGAGA+GGG	+	chr1_2:72679421-72679440	None:intergenic	50.0%
	CTGGATTCAGCTGAAGATGC+TGG	-	chr1_2:72679604-72679623	Msa0090620:intron	50.0%
	TTCAGCTGAAGATGCTGGAG+TGG	-	chr1_2:72679609-72679628	Msa0090620:intron	50.0%
	GGTGCATGTTCTACTTGTGC+TGG	-	chr1_2:72679655-72679674	Msa0090620:intron	50.0%
!	TTCTACTTGTGCTGGCCAAG+TGG	-	chr1_2:72679663-72679682	Msa0090620:intron	50.0%
!	TTGTGCTGGCCAAGTGGTTA+CGG	-	chr1_2:72679669-72679688	Msa0090620:intron	50.0%
!!	TCTCGATTTGCTGCTCATCG+AGG	+	chr1_2:72679723-72679742	None:intergenic	50.0%
	CGATGAGCAGCAAATCGAGA+AGG	-	chr1_2:72679723-72679742	Msa0090620:intron	50.0%
	TGTACGGAACAGTGCCCTCT+CGG	-	chr1_2:72679404-72679423	Msa0090620:intron	55.0%
	CAGAGCACAAGATGTCCGAG+AGG	+	chr1_2:72679422-72679441	None:intergenic	55.0%
	GCACCCGCTCTGCATGAATA+AGG	+	chr1_2:72679640-72679659	None:intergenic	55.0%
!	TGTGCTGGCCAAGTGGTTAC+GGG	-	chr1_2:72679670-72679689	Msa0090620:intron	55.0%
	CGACAGAACCCGTAACCACT+TGG	+	chr1_2:72679681-72679700	None:intergenic	55.0%
	TGTACGGAACAGTGCCCTCT+CGG	-	chr1_2:72679404-72679423	Msa0090620:intron	55.0%
	CAGAGCACAAGATGTCCGAG+AGG	+	chr1_2:72679422-72679441	None:intergenic	55.0%
	GCACCCGCTCTGCATGAATA+AGG	+	chr1_2:72679640-72679659	None:intergenic	55.0%
!	TGTGCTGGCCAAGTGGTTAC+GGG	-	chr1_2:72679670-72679689	Msa0090620:intron	55.0%
	CGACAGAACCCGTAACCACT+TGG	+	chr1_2:72679681-72679700	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	72677966	72680073	72677966	ID=Msa0090620;Name=Msa0090620
chr1_2	mRNA	72677966	72680073	72677966	ID=Msa0090620-mRNA-1;Parent=Msa0090620;Name=Msa0090620-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0\|0\|0.5\|0.5\|1\|1\|2\|251\|159
chr1_2	exon	72677966	72678689	72677966	ID=Msa0090620-mRNA-1:exon:25243;Parent=Msa0090620-mRNA-1
chr1_2	exon	72680067	72680073	72680067	ID=Msa0090620-mRNA-1:exon:25242;Parent=Msa0090620-mRNA-1
chr1_2	CDS	72680067	72680073	72680067	ID=Msa0090620-mRNA-1:cds;Parent=Msa0090620-mRNA-1
chr1_2	CDS	72678217	72678689	72678217	ID=Msa0090620-mRNA-1:cds;Parent=Msa0090620-mRNA-1
chr1_2	three_prime_UTR	72677966	72678216	72677966	ID=Msa0090620-mRNA-1:three_prime_utr;Parent=Msa0090620-mRNA-1

Gene Sequence

>Msa0090620

ATGGAAAGTATAAAAATGTCAGCCGTGAATATGTCCACCGTGAGACTTTCAACAGCTTCATTGTACGGAACAGTGCCCTCTCGGACATCTTGTGCTCTGATGAAGAGTCCATCAAGTTTGAGATCTGTGAAGAATGTGTCCAAAACATTTGGACTAAAATCTTCATCATTTAGAGTATCTGCAATGGCAGTATACAAAGTGAAACTGATTGGACCAGATGGAACAGAGAACGAATTTGATGCCCCTGATGACTCTTACATTCTGGATTCAGCTGAAGATGCTGGAGTGGAGCTACCTTATTCATGCAGAGCGGGTGCATGTTCTACTTGTGCTGGCCAAGTGGTTACGGGTTCTGTCGATCAGTCTGATCAATCTTTCCTCGATGAGCAGCAAATCGAGAAGGGTTATCTTCTCACTTGTGTCTCATACCCAAAATCAGATACTGTGATTTACACACACAAGGAGGAAGAACTCTACTAA

Protein sequence

>Msa0090620

MESIKMSAVNMSTVRLSTASLYGTVPSRTSCALMKSPSSLRSVKNVSKTFGLKSSSFRVSAMAVYKVKLIGPDGTENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDEQQIEKGYLLTCVSYPKSDTVIYTHKEEELY*