AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0782030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782030 MtrunA17_Chr5g0439011 97.484 318 8 0 1 318 1 318 0.0 647
Msa0782030 MtrunA17_Chr3g0121141 85.489 317 42 1 2 318 1 313 0.0 571
Msa0782030 MtrunA17_Chr2g0289341 72.414 319 84 2 2 318 1 317 2.57e-178 495
Msa0782030 MtrunA17_Chr3g0125201 49.196 311 146 3 3 306 1 306 7.00e-106 311
Msa0782030 MtrunA17_Chr6g0488511 47.078 308 148 5 3 306 1 297 7.49e-98 291
Msa0782030 MtrunA17_Chr4g0075471 79.856 139 27 1 155 293 24 161 1.42e-78 236
Msa0782030 MtrunA17_Chr5g0437181 38.019 313 179 6 4 306 48 355 5.22e-69 219
Msa0782030 MtrunA17_Chr4g0075431 63.415 164 59 1 2 165 1 163 7.65e-68 209
Msa0782030 MtrunA17_Chr3g0113641 36.278 317 185 7 3 308 48 358 4.56e-64 206
Msa0782030 MtrunA17_Chr4g0006371 34.824 313 190 5 3 305 60 368 4.74e-64 206
Msa0782030 MtrunA17_Chr7g0242551 35.783 313 187 6 3 305 52 360 1.77e-63 205
Msa0782030 MtrunA17_Chr8g0345831 36.426 291 169 8 4 286 41 323 6.37e-55 182
Msa0782030 MtrunA17_Chr3g0109041 34.653 303 174 9 5 288 42 339 3.14e-54 181
Msa0782030 MtrunA17_Chr8g0375671 34.875 281 160 7 2 267 49 321 9.72e-54 179
Msa0782030 MtrunA17_Chr8g0375571 34.286 280 159 6 6 269 46 316 4.74e-53 177
Msa0782030 MtrunA17_Chr8g0375601 32.353 306 186 8 5 298 48 344 5.68e-53 177
Msa0782030 MtrunA17_Chr5g0423191 31.250 304 195 5 2 298 44 340 3.02e-50 170
Msa0782030 MtrunA17_Chr1g0184101 34.122 296 177 5 4 290 37 323 9.85e-50 168
Msa0782030 MtrunA17_Chr8g0371931 37.175 269 154 7 5 262 39 303 1.00e-49 169
Msa0782030 MtrunA17_Chr8g0371921 36.431 269 156 7 5 262 39 303 1.33e-49 169
Msa0782030 MtrunA17_Chr5g0420981 30.464 302 193 6 6 298 54 347 3.40e-49 167
Msa0782030 MtrunA17_Chr3g0128001 33.562 292 174 7 4 286 37 317 5.68e-49 166
Msa0782030 MtrunA17_Chr5g0420951 31.023 303 190 6 6 298 54 347 1.21e-48 166
Msa0782030 MtrunA17_Chr5g0423201 31.894 301 190 5 6 298 48 341 2.79e-48 165
Msa0782030 MtrunA17_Chr5g0421041 31.023 303 195 5 3 298 43 338 3.17e-48 165
Msa0782030 MtrunA17_Chr7g0220001 33.443 305 183 7 8 304 41 333 4.59e-48 164
Msa0782030 MtrunA17_Chr8g0365241 30.033 303 193 6 6 298 58 351 6.76e-48 164
Msa0782030 MtrunA17_Chr7g0239111 32.302 291 183 5 5 288 55 338 7.85e-48 164
Msa0782030 MtrunA17_Chr5g0421011 30.667 300 194 5 6 298 48 340 2.52e-47 162
Msa0782030 MtrunA17_Chr5g0412681 34.459 296 171 8 4 286 32 317 2.53e-47 162
Msa0782030 MtrunA17_Chr5g0420941 31.126 302 192 6 5 298 45 338 2.97e-47 162
Msa0782030 MtrunA17_Chr5g0423251 30.592 304 197 5 2 298 44 340 5.46e-47 162
Msa0782030 MtrunA17_Chr5g0405411 35.688 269 158 7 5 262 39 303 1.34e-46 160
Msa0782030 MtrunA17_Chr5g0426891 32.423 293 184 8 5 289 39 325 2.80e-46 159
Msa0782030 MtrunA17_Chr5g0421091 30.921 304 191 7 5 298 45 339 5.14e-46 159
Msa0782030 MtrunA17_Chr2g0314401 31.148 305 196 6 2 298 48 346 9.61e-46 158
Msa0782030 MtrunA17_Chr2g0296371 32.248 307 189 7 4 298 49 348 1.60e-45 158
Msa0782030 MtrunA17_Chr2g0314381 30.921 304 196 6 3 298 75 372 1.82e-45 158
Msa0782030 MtrunA17_Chr1g0184161 32.852 277 165 5 6 270 39 306 3.33e-45 157
Msa0782030 MtrunA17_Chr6g0455481 33.228 316 178 7 8 308 42 339 7.97e-45 155
Msa0782030 MtrunA17_Chr5g0423221 28.667 300 201 5 6 298 72 365 1.55e-44 156
Msa0782030 MtrunA17_Chr2g0311761 33.099 284 170 6 18 288 83 359 2.43e-44 155
Msa0782030 MtrunA17_Chr2g0311701 31.699 306 173 10 3 287 67 357 2.55e-44 155
Msa0782030 MtrunA17_Chr2g0311681 31.132 318 179 11 3 297 61 361 3.86e-44 154
Msa0782030 MtrunA17_Chr1g0187831 33.444 302 176 11 3 290 68 358 3.88e-44 155
Msa0782030 MtrunA17_Chr1g0162191 32.353 272 171 6 5 267 47 314 4.96e-44 154
Msa0782030 MtrunA17_Chr7g0239121 31.525 295 181 7 5 288 51 335 5.36e-44 154
Msa0782030 MtrunA17_Chr5g0421101 28.333 300 201 5 6 298 48 340 9.80e-44 153
Msa0782030 MtrunA17_Chr2g0311741 33.876 307 169 11 3 292 25 314 1.30e-43 152
Msa0782030 MtrunA17_Chr2g0311921 32.270 282 174 5 18 290 69 342 1.57e-43 152
Msa0782030 MtrunA17_Chr3g0102041 33.829 269 163 6 5 262 39 303 1.82e-43 152
Msa0782030 MtrunA17_Chr2g0311831 33.003 303 173 9 6 292 69 357 1.93e-43 153
Msa0782030 MtrunA17_Chr1g0184121 32.482 274 171 6 6 270 38 306 2.00e-43 152
Msa0782030 MtrunA17_Chr1g0187811 33.555 301 172 12 6 290 189 477 2.36e-43 155
Msa0782030 MtrunA17_Chr1g0184111 29.693 293 191 7 6 290 38 323 3.25e-43 151
Msa0782030 MtrunA17_Chr7g0239101 30.719 306 188 7 5 298 55 348 3.41e-43 152
Msa0782030 MtrunA17_Chr2g0319491 32.990 291 166 8 6 286 34 305 3.41e-43 151
Msa0782030 MtrunA17_Chr7g0239821 31.615 291 178 5 19 298 77 357 5.03e-43 152
Msa0782030 MtrunA17_Chr2g0311711 32.573 307 170 11 1 287 63 352 5.58e-43 151
Msa0782030 MtrunA17_Chr5g0412651 31.353 303 180 8 4 287 37 330 1.19e-42 150
Msa0782030 MtrunA17_Chr2g0311691 31.310 313 185 11 3 297 61 361 1.31e-42 150
Msa0782030 MtrunA17_Chr8g0375701 30.742 283 184 4 22 298 71 347 1.45e-42 150
Msa0782030 MtrunA17_Chr8g0348081 32.119 302 180 9 5 292 60 350 1.48e-42 150
Msa0782030 MtrunA17_Chr5g0412671 33.218 289 174 7 4 278 37 320 1.58e-42 150
Msa0782030 MtrunA17_Chr8g0336751 35.656 244 141 6 18 253 109 344 3.07e-42 150
Msa0782030 MtrunA17_Chr1g0184151 33.455 275 170 4 4 270 37 306 3.12e-42 149
Msa0782030 MtrunA17_Chr7g0266651 31.373 306 190 8 4 298 58 354 5.56e-42 149
Msa0782030 MtrunA17_Chr5g0420901 31.636 275 175 5 5 271 46 315 6.40e-42 148
Msa0782030 MtrunA17_Chr5g0398291 31.864 295 184 6 6 287 48 338 9.66e-42 148
Msa0782030 MtrunA17_Chr3g0145171 29.455 275 182 6 3 268 50 321 1.38e-41 147
Msa0782030 MtrunA17_Chr7g0235951 31.013 316 178 12 3 298 65 360 2.46e-41 147
Msa0782030 MtrunA17_Chr2g0314391 29.836 305 200 5 2 298 67 365 2.57e-41 147
Msa0782030 MtrunA17_Chr4g0064781 30.986 284 183 6 2 277 47 325 4.91e-41 146
Msa0782030 MtrunA17_Chr2g0311861 34.173 278 157 8 18 292 79 333 6.43e-41 145
Msa0782030 MtrunA17_Chr4g0066121 34.164 281 160 9 5 269 60 331 7.34e-41 146
Msa0782030 MtrunA17_Chr4g0050031 32.468 308 185 9 5 299 62 359 1.12e-40 145
Msa0782030 MtrunA17_Chr8g0336631 32.026 306 174 11 6 292 61 351 1.39e-40 145
Msa0782030 MtrunA17_Chr1g0179801 33.333 282 167 7 3 269 64 339 1.60e-40 145
Msa0782030 MtrunA17_Chr8g0370711 30.921 304 193 9 6 300 53 348 1.83e-40 144
Msa0782030 MtrunA17_Chr8g0364471 31.190 311 173 10 3 290 65 357 2.39e-40 144
Msa0782030 MtrunA17_Chr8g0375681 30.112 269 175 6 37 298 15 277 2.48e-40 142
Msa0782030 MtrunA17_Chr7g0220011 29.492 295 185 9 8 290 39 322 3.83e-40 143
Msa0782030 MtrunA17_Chr1g0167911 34.448 299 158 10 6 282 55 337 6.56e-40 143
Msa0782030 MtrunA17_Chr7g0239071 29.831 295 190 7 12 298 8 293 1.29e-39 141
Msa0782030 MtrunA17_Chr4g0055591 30.619 307 174 10 5 292 61 347 1.38e-39 142
Msa0782030 MtrunA17_Chr8g0336861 31.731 312 177 10 5 298 60 353 1.40e-39 142
Msa0782030 MtrunA17_Chr3g0087031 31.164 292 187 8 3 287 58 342 1.74e-39 142
Msa0782030 MtrunA17_Chr5g0424201 32.653 294 181 9 3 287 42 327 4.67e-39 140
Msa0782030 MtrunA17_Chr8g0336781 31.579 285 170 9 1 269 91 366 1.76e-38 140
Msa0782030 MtrunA17_Chr8g0336851 29.934 304 184 9 5 292 60 350 1.89e-38 139
Msa0782030 MtrunA17_Chr1g0162361 31.206 282 167 8 6 267 28 302 1.99e-38 139
Msa0782030 MtrunA17_Chr7g0232161 34.545 220 134 3 24 236 78 294 2.35e-38 138
Msa0782030 MtrunA17_Chr8g0336761 31.818 286 167 9 6 274 61 335 2.64e-38 139
Msa0782030 MtrunA17_Chr3g0126741 32.028 281 172 6 1 269 55 328 4.50e-38 138
Msa0782030 MtrunA17_Chr1g0187821 31.788 302 180 10 3 290 65 354 7.60e-38 138
Msa0782030 MtrunA17_Chr4g0045451 29.831 295 179 6 6 278 33 321 1.10e-37 137
Msa0782030 MtrunA17_Chr5g0420721 32.735 223 142 3 78 298 26 242 1.28e-37 134
Msa0782030 MtrunA17_Chr8g0335411 31.190 311 189 12 3 298 65 365 1.72e-37 137
Msa0782030 MtrunA17_Chr5g0423211 28.105 306 198 8 5 298 47 342 1.98e-37 136
Msa0782030 MtrunA17_Chr7g0250511 32.667 300 181 9 4 292 48 337 2.60e-37 136
Msa0782030 MtrunA17_Chr3g0093751 32.450 302 171 10 4 290 55 338 2.70e-37 136
Msa0782030 MtrunA17_Chr8g0354261 32.302 291 153 11 3 267 66 338 3.19e-37 136
Msa0782030 MtrunA17_Chr8g0370721 29.889 271 178 6 6 267 53 320 4.45e-37 135
Msa0782030 MtrunA17_Chr3g0105281 30.545 275 158 7 25 286 47 301 8.39e-37 134
Msa0782030 MtrunA17_Chr2g0311631 32.288 319 175 13 4 299 54 354 8.84e-37 135
Msa0782030 MtrunA17_Chr7g0247991 30.492 305 177 12 3 287 65 354 1.49e-36 134
Msa0782030 MtrunA17_Chr3g0093761 31.457 302 173 11 4 290 55 337 1.82e-36 134
Msa0782030 MtrunA17_Chr4g0045441 28.669 293 185 6 6 278 33 321 1.98e-36 134
Msa0782030 MtrunA17_Chr1g0162351 28.053 303 186 7 4 278 68 366 2.54e-36 134
Msa0782030 MtrunA17_Chr4g0045471 30.464 302 175 10 6 278 27 322 2.73e-36 133
Msa0782030 MtrunA17_Chr7g0265221 28.269 283 186 4 3 269 65 346 4.15e-36 134
Msa0782030 MtrunA17_Chr2g0332191 28.859 298 188 8 6 291 53 338 4.74e-36 133
Msa0782030 MtrunA17_Chr7g0265351 30.795 302 170 10 4 287 38 318 5.61e-36 132
Msa0782030 MtrunA17_Chr8g0354241 32.740 281 165 11 3 267 66 338 6.25e-36 133
Msa0782030 MtrunA17_Chr3g0093741 31.803 305 169 11 4 290 55 338 6.39e-36 132
Msa0782030 MtrunA17_Chr4g0066991 30.769 299 174 9 3 292 65 339 1.17e-35 132
Msa0782030 MtrunA17_Chr4g0045411 31.111 270 168 7 11 266 43 308 1.76e-35 131
Msa0782030 MtrunA17_Chr1g0162321 27.632 304 186 7 4 278 68 366 2.24e-35 132
Msa0782030 MtrunA17_Chr2g0313111 30.108 279 181 6 16 286 33 305 2.47e-35 130
Msa0782030 MtrunA17_Chr3g0114861 31.333 300 185 8 3 289 38 329 2.92e-35 130
Msa0782030 MtrunA17_Chr5g0424211 31.071 280 173 9 3 269 40 312 3.74e-35 130
Msa0782030 MtrunA17_Chr1g0167951 32.500 280 171 7 6 274 54 326 7.55e-35 129
Msa0782030 MtrunA17_Chr6g0472861 31.148 305 178 13 3 290 68 357 8.59e-35 130
Msa0782030 MtrunA17_Chr1g0184241 29.508 305 184 8 2 292 66 353 2.14e-34 129
Msa0782030 MtrunA17_Chr3g0145181 26.978 278 180 6 22 281 69 341 4.10e-34 127
Msa0782030 MtrunA17_Chr7g0225881 29.530 298 186 11 6 290 68 354 6.55e-34 127
Msa0782030 MtrunA17_Chr1g0167961 32.046 259 160 7 4 253 68 319 1.36e-33 127
Msa0782030 MtrunA17_Chr1g0161111 30.645 310 176 10 6 299 133 419 3.32e-33 127
Msa0782030 MtrunA17_Chr1g0161041 28.896 308 165 12 6 287 97 376 3.58e-33 126
Msa0782030 MtrunA17_Chr3g0092531 29.537 281 184 6 21 296 26 297 4.77e-33 124
Msa0782030 MtrunA17_Chr2g0285931 28.571 287 169 7 25 288 42 315 5.94e-32 121
Msa0782030 MtrunA17_Chr1g0167931 31.746 252 131 6 4 253 53 265 8.87e-32 120
Msa0782030 MtrunA17_Chr3g0145201 27.237 257 171 5 22 267 704 955 1.29e-31 125
Msa0782030 MtrunA17_Chr8g0351101 26.045 311 201 9 20 311 72 372 2.48e-31 120
Msa0782030 MtrunA17_Chr1g0161081 28.713 303 180 9 5 290 73 356 2.51e-31 120
Msa0782030 MtrunA17_Chr1g0148771 28.679 265 173 6 6 263 64 319 3.24e-31 120
Msa0782030 MtrunA17_Chr4g0045461 29.795 292 182 7 6 278 33 320 2.98e-30 117
Msa0782030 MtrunA17_Chr7g0236011 29.677 310 183 11 3 292 65 359 3.31e-30 117
Msa0782030 MtrunA17_Chr4g0045431 29.197 274 154 7 22 267 49 310 3.82e-30 117
Msa0782030 MtrunA17_Chr7g0239091 29.276 304 202 7 4 306 159 450 4.45e-30 118
Msa0782030 MtrunA17_Chr5g0394071 34.682 173 100 3 114 286 4 163 1.93e-29 111
Msa0782030 MtrunA17_Chr4g0011311 30.085 236 141 8 2 224 64 288 2.52e-29 114
Msa0782030 MtrunA17_Chr1g0204181 29.643 280 162 9 25 283 82 347 3.29e-29 115
Msa0782030 MtrunA17_Chr7g0235981 31.646 237 135 6 36 259 55 277 5.16e-29 113
Msa0782030 MtrunA17_Chr5g0420881 37.226 137 83 1 163 299 4 137 1.77e-28 107
Msa0782030 MtrunA17_Chr3g0126761 38.608 158 95 2 112 269 44 199 2.14e-28 109
Msa0782030 MtrunA17_Chr8g0384461 25.083 303 203 11 3 289 45 339 3.10e-28 112
Msa0782030 MtrunA17_Chr8g0358941 27.742 310 204 8 16 309 32 337 5.11e-28 111
Msa0782030 MtrunA17_Chr3g0125421 27.922 308 184 13 6 289 37 330 2.63e-27 109
Msa0782030 MtrunA17_Chr4g0052251 25.795 283 177 7 25 286 43 313 1.07e-26 107
Msa0782030 MtrunA17_Chr1g0191201 25.828 302 198 12 6 289 54 347 1.36e-26 107
Msa0782030 MtrunA17_Chr6g0474391 26.855 283 166 7 25 283 87 352 1.44e-26 107
Msa0782030 MtrunA17_Chr2g0314371 26.966 267 160 6 3 239 50 311 1.73e-26 107
Msa0782030 MtrunA17_Chr8g0336801 39.394 132 73 4 163 291 14 141 3.87e-26 101
Msa0782030 MtrunA17_Chr8g0384481 26.374 273 182 8 25 285 81 346 4.16e-26 106
Msa0782030 MtrunA17_Chr5g0407781 26.045 311 197 10 1 299 1 290 5.83e-26 104
Msa0782030 MtrunA17_Chr8g0348951 26.452 310 192 9 1 289 1 295 2.94e-25 103
Msa0782030 MtrunA17_Chr3g0114871 30.973 226 145 6 8 224 42 265 6.20e-25 101
Msa0782030 MtrunA17_Chr7g0233661 36.000 150 83 3 137 286 1 137 9.06e-25 98.2
Msa0782030 MtrunA17_Chr4g0068891 25.081 307 198 9 5 295 20 310 1.43e-24 101
Msa0782030 MtrunA17_Chr1g0158011 35.196 179 107 6 113 288 71 243 2.07e-24 99.8
Msa0782030 MtrunA17_Chr4g0064771 32.973 185 117 4 113 292 27 209 2.11e-24 98.6
Msa0782030 MtrunA17_Chr3g0130391 26.132 287 185 10 25 292 89 367 9.68e-24 100
Msa0782030 MtrunA17_Chr8g0389941 28.990 307 178 13 25 299 51 349 2.35e-23 98.6
Msa0782030 MtrunA17_Chr6g0486831 29.003 331 189 15 5 299 18 338 2.82e-23 98.2
Msa0782030 MtrunA17_Chr4g0037611 36.478 159 87 4 129 286 8 153 3.72e-23 94.4
Msa0782030 MtrunA17_Chr4g0053251 28.030 264 162 8 20 262 33 289 3.90e-23 97.4
Msa0782030 MtrunA17_Chr7g0247741 27.143 280 171 10 28 289 31 295 9.57e-23 96.3
Msa0782030 MtrunA17_Chr1g0194321 26.730 318 195 11 3 295 18 322 1.14e-22 96.7
Msa0782030 MtrunA17_Chr1g0170631 29.208 202 133 4 112 311 3 196 6.05e-22 91.7
Msa0782030 MtrunA17_Chr4g0055911 28.315 279 170 11 3 260 7 276 1.11e-21 93.6
Msa0782030 MtrunA17_Chr8g0362741 30.392 204 117 8 33 224 83 273 1.24e-21 92.8
Msa0782030 MtrunA17_Chr2g0319521 36.522 115 69 2 110 224 14 124 6.18e-21 87.0
Msa0782030 MtrunA17_Chr4g0055871 28.364 275 170 11 3 260 7 271 7.07e-21 91.3
Msa0782030 MtrunA17_Chr3g0092581 29.143 175 118 4 122 296 1 169 3.19e-20 86.7
Msa0782030 MtrunA17_Chr5g0407731 24.333 300 196 7 5 293 33 312 6.86e-20 88.6
Msa0782030 MtrunA17_Chr8g0336871 34.503 171 96 5 125 292 3 160 1.79e-19 84.3
Msa0782030 MtrunA17_Chr1g0158031 35.762 151 87 6 122 268 1 145 9.83e-19 82.4
Msa0782030 MtrunA17_Chr8g0364171 34.783 115 67 3 112 224 18 126 2.76e-17 77.4
Msa0782030 MtrunA17_Chr4g0004071 26.910 301 192 11 5 290 9 296 4.93e-17 80.1
Msa0782030 MtrunA17_Chr1g0167921 33.562 146 83 4 88 223 15 156 9.45e-17 76.6
Msa0782030 MtrunA17_Chr2g0293931 29.834 181 117 6 122 295 17 194 1.73e-16 77.0
Msa0782030 MtrunA17_Chr8g0375581 46.774 62 33 0 159 220 24 85 2.33e-16 73.2
Msa0782030 MtrunA17_Chr1g0158021 27.184 206 136 9 17 216 64 261 3.46e-15 74.3
Msa0782030 MtrunA17_Chr4g0004061 27.303 304 188 13 5 290 9 297 3.65e-15 74.7
Msa0782030 MtrunA17_Chr1g0161101 44.211 95 42 4 163 256 409 493 1.29e-14 74.3
Msa0782030 MtrunA17_Chr3g0138351 27.807 187 126 6 111 294 125 305 3.08e-14 72.4
Msa0782030 MtrunA17_Chr2g0311611 42.029 69 32 2 163 224 4 71 1.83e-13 64.7
Msa0782030 MtrunA17_Chr8g0336831 27.461 193 116 7 7 183 59 243 4.61e-13 68.2
Msa0782030 MtrunA17_Chr7g0219991 33.636 110 69 1 113 222 249 354 1.35e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782030 AT1G05010.1 73.520 321 79 4 2 316 1 321 7.53e-177 492
Msa0782030 AT1G12010.1 69.375 320 91 2 1 318 3 317 2.05e-172 481
Msa0782030 AT1G62380.1 68.553 318 93 2 3 318 5 317 2.71e-171 478
Msa0782030 AT2G19590.1 46.906 307 149 4 3 307 9 303 5.89e-104 307
Msa0782030 AT1G77330.1 48.726 314 142 5 3 306 1 305 7.10e-99 294
Msa0782030 AT2G19590.2 47.636 275 130 4 35 307 26 288 9.95e-93 278
Msa0782030 AT5G05600.1 35.836 293 174 5 4 286 61 349 4.22e-59 194
Msa0782030 AT3G11180.1 34.385 317 189 7 3 311 93 398 8.49e-57 189
Msa0782030 AT3G11180.2 34.286 315 185 7 3 301 93 401 9.13e-57 189
Msa0782030 AT4G10490.1 35.117 299 182 7 4 295 41 334 2.94e-56 186
Msa0782030 AT2G38240.1 33.673 294 183 5 3 289 46 334 3.31e-56 186
Msa0782030 AT5G24530.1 33.784 296 179 6 4 290 37 324 8.00e-55 182
Msa0782030 AT4G16330.2 36.691 278 154 8 25 288 82 351 1.98e-52 176
Msa0782030 AT3G55970.1 34.672 274 168 4 5 267 52 325 2.28e-51 174
Msa0782030 AT4G10500.1 32.993 294 176 7 4 286 43 326 1.51e-50 171
Msa0782030 AT1G78550.1 31.561 301 192 6 6 298 54 348 1.66e-50 171
Msa0782030 AT3G51240.1 37.175 269 154 7 5 262 38 302 6.81e-49 167
Msa0782030 AT1G17010.1 32.180 289 172 5 1 274 50 329 1.90e-45 158
Msa0782030 AT1G17020.1 31.507 292 188 5 3 286 51 338 3.31e-44 155
Msa0782030 AT4G25310.1 33.579 271 165 5 24 287 72 334 6.80e-44 154
Msa0782030 AT5G20400.1 30.303 297 195 6 3 290 43 336 1.67e-43 152
Msa0782030 AT4G25300.1 30.928 291 188 5 4 286 51 336 2.42e-43 152
Msa0782030 AT4G16330.1 39.614 207 115 5 85 288 46 245 2.75e-43 149
Msa0782030 AT1G06620.1 32.353 306 183 8 3 295 60 354 1.06e-42 151
Msa0782030 AT5G08640.2 31.849 292 181 8 6 286 41 325 5.74e-42 148
Msa0782030 AT5G08640.1 31.849 292 181 8 6 286 41 325 5.74e-42 148
Msa0782030 AT3G12900.1 31.399 293 174 9 8 287 59 337 1.24e-41 148
Msa0782030 AT4G21200.1 34.962 266 150 9 6 260 43 296 1.28e-41 147
Msa0782030 AT1G78550.2 30.515 272 176 5 34 298 5 270 1.34e-41 146
Msa0782030 AT1G49390.1 30.292 274 180 5 3 267 43 314 2.71e-41 147
Msa0782030 AT2G30830.1 32.770 296 177 8 16 300 68 352 7.79e-41 146
Msa0782030 AT1G04350.1 32.660 297 177 11 6 290 59 344 3.45e-40 144
Msa0782030 AT5G20550.1 30.216 278 182 5 2 269 42 317 7.81e-40 143
Msa0782030 AT3G21420.1 31.022 274 175 6 6 268 56 326 1.15e-39 143
Msa0782030 AT4G22880.1 30.249 281 182 5 18 288 63 339 1.77e-39 142
Msa0782030 AT4G22880.2 30.249 281 182 5 18 288 63 339 1.77e-39 142
Msa0782030 AT4G22880.3 30.249 281 182 5 18 288 63 339 1.77e-39 142
Msa0782030 AT5G05600.2 33.766 231 142 4 4 224 61 290 1.86e-39 140
Msa0782030 AT3G19010.1 31.633 294 176 6 6 278 29 318 6.35e-39 140
Msa0782030 AT3G19010.4 31.633 294 176 6 6 278 29 318 6.35e-39 140
Msa0782030 AT1G55290.1 29.530 298 182 10 4 288 61 343 7.72e-39 140
Msa0782030 AT1G15550.1 28.523 298 194 7 4 292 56 343 8.06e-39 140
Msa0782030 AT5G43450.1 29.904 311 194 11 1 299 57 355 1.65e-38 140
Msa0782030 AT5G63590.1 32.203 295 180 9 3 286 12 297 2.68e-38 138
Msa0782030 AT3G13610.1 29.856 278 172 9 25 290 79 345 2.76e-38 139
Msa0782030 AT5G59540.1 31.126 302 184 10 3 290 59 350 2.87e-38 139
Msa0782030 AT3G61400.1 32.895 304 179 12 3 292 65 357 3.74e-38 139
Msa0782030 AT5G59530.1 31.046 306 180 10 3 290 56 348 1.05e-37 138
Msa0782030 AT5G54000.2 29.740 269 178 6 3 262 44 310 1.08e-37 137
Msa0782030 AT1G80340.1 29.603 277 182 6 25 292 64 336 1.75e-37 137
Msa0782030 AT1G03410.2 33.206 262 153 9 3 251 55 307 2.13e-37 137
Msa0782030 AT5G43440.1 30.721 319 179 11 3 299 60 358 2.35e-37 137
Msa0782030 AT2G36690.2 30.576 278 177 6 3 270 59 330 2.43e-37 137
Msa0782030 AT2G36690.1 30.576 278 177 6 3 270 59 330 2.43e-37 137
Msa0782030 AT3G55970.2 32.328 232 146 4 4 224 51 282 3.13e-37 135
Msa0782030 AT1G03410.1 32.830 265 154 10 3 253 92 346 4.00e-37 137
Msa0782030 AT3G19000.1 31.579 304 179 9 6 287 33 329 4.75e-37 135
Msa0782030 AT2G30840.1 31.944 288 174 10 16 292 72 348 1.36e-36 135
Msa0782030 AT3G51240.2 40.884 181 99 4 86 262 42 218 2.51e-36 132
Msa0782030 AT1G06650.2 28.475 295 180 10 14 292 76 355 8.51e-36 133
Msa0782030 AT1G49390.2 30.380 237 156 4 38 267 1 235 3.58e-35 129
Msa0782030 AT5G63595.1 31.679 262 151 9 4 260 24 262 6.90e-35 128
Msa0782030 AT1G04380.1 32.558 301 170 11 6 290 46 329 1.05e-34 129
Msa0782030 AT5G54000.1 30.603 232 152 5 38 262 1 230 6.79e-34 125
Msa0782030 AT2G25450.1 32.959 267 158 9 16 269 68 326 2.58e-33 126
Msa0782030 AT1G06640.1 29.719 249 158 6 14 253 76 316 1.05e-32 124
Msa0782030 AT3G19010.3 30.961 281 167 8 5 278 28 288 1.10e-32 123
Msa0782030 AT1G03400.1 32.700 263 148 10 3 253 54 299 1.40e-32 124
Msa0782030 AT2G30840.3 31.250 288 170 11 16 292 72 342 2.22e-32 123
Msa0782030 AT5G63600.1 30.337 267 170 7 28 287 53 310 2.73e-32 122
Msa0782030 AT4G25310.2 29.889 271 147 5 24 287 72 306 6.52e-32 121
Msa0782030 AT5G63600.2 30.597 268 169 8 28 287 53 311 1.65e-31 120
Msa0782030 AT3G60290.1 30.068 296 186 10 3 287 50 335 2.13e-31 120
Msa0782030 AT1G06645.1 29.310 290 177 11 16 292 91 365 2.97e-31 121
Msa0782030 AT1G60980.1 28.169 284 173 9 25 289 80 351 3.44e-31 120
Msa0782030 AT4G25300.2 34.463 177 111 2 111 287 72 243 7.97e-31 117
Msa0782030 AT1G50960.1 28.231 294 184 7 3 286 38 314 9.54e-31 119
Msa0782030 AT5G07200.1 27.660 282 180 8 25 289 81 355 1.76e-30 119
Msa0782030 AT2G44800.1 27.848 316 208 9 4 309 51 356 1.85e-30 118
Msa0782030 AT1G80330.1 28.094 299 192 8 4 289 48 336 2.22e-30 118
Msa0782030 AT1G44090.1 28.477 302 196 8 3 289 61 357 3.00e-30 118
Msa0782030 AT5G07480.1 31.734 271 158 10 6 257 45 307 5.07e-30 117
Msa0782030 AT4G21690.1 26.645 304 195 8 5 292 47 338 7.84e-30 116
Msa0782030 AT3G19000.2 29.719 249 149 8 6 232 33 277 1.45e-28 111
Msa0782030 AT1G06620.2 30.736 231 142 6 4 224 61 283 2.24e-28 111
Msa0782030 AT1G78440.1 26.936 297 193 9 5 286 15 302 3.05e-28 112
Msa0782030 AT5G51810.1 26.578 301 198 8 3 289 61 352 6.03e-28 112
Msa0782030 AT3G19010.2 30.453 243 144 6 6 227 29 267 8.89e-28 110
Msa0782030 AT3G61400.2 32.328 232 139 9 3 224 65 288 2.40e-27 108
Msa0782030 AT5G43450.2 29.310 232 146 8 1 223 57 279 2.71e-27 108
Msa0782030 AT1G03400.2 28.829 333 174 13 3 292 54 366 2.78e-27 110
Msa0782030 AT4G23340.1 28.421 285 161 9 28 289 30 294 3.52e-27 108
Msa0782030 AT4G25420.1 25.246 305 201 8 3 289 59 354 4.52e-27 109
Msa0782030 AT3G47190.1 30.142 282 156 10 3 260 30 294 5.60e-27 108
Msa0782030 AT2G30840.2 30.556 216 134 6 16 223 72 279 7.63e-26 105
Msa0782030 AT3G49620.1 27.667 300 186 8 20 293 59 353 1.35e-25 105
Msa0782030 AT5G12270.1 42.424 132 70 4 163 290 214 343 1.41e-25 105
Msa0782030 AT1G30040.1 27.211 294 196 10 6 286 24 312 7.75e-25 102
Msa0782030 AT5G58660.1 27.586 290 168 12 3 260 32 311 1.20e-24 102
Msa0782030 AT1G06650.1 27.854 219 140 7 14 223 76 285 1.30e-24 101
Msa0782030 AT5G43935.1 28.975 283 156 10 28 294 39 292 1.71e-24 100
Msa0782030 AT1G06640.2 27.556 225 147 5 14 230 76 292 3.05e-24 100
Msa0782030 AT5G59540.2 28.755 233 148 8 3 224 59 284 6.77e-24 99.4
Msa0782030 AT5G43440.2 28.750 240 135 8 3 223 60 282 9.24e-24 99.0
Msa0782030 AT1G06640.3 27.907 215 139 5 14 220 76 282 3.64e-23 97.4
Msa0782030 AT3G49630.1 26.990 289 185 8 20 287 34 317 4.76e-23 97.8
Msa0782030 AT3G49630.3 26.990 289 185 8 20 287 30 313 4.97e-23 97.8
Msa0782030 AT5G51310.1 25.159 314 195 11 1 289 1 299 5.22e-23 97.4
Msa0782030 AT2G34555.1 26.897 290 171 9 20 286 36 307 6.18e-23 97.4
Msa0782030 AT5G07480.2 34.021 194 105 6 74 257 18 198 1.20e-22 95.1
Msa0782030 AT5G63580.2 31.897 232 144 7 1 224 15 240 1.94e-22 94.4
Msa0782030 AT3G50210.4 25.000 292 185 7 24 287 37 322 3.40e-22 95.5
Msa0782030 AT3G50210.1 25.000 292 185 7 24 287 37 322 3.40e-22 95.5
Msa0782030 AT3G50210.3 25.000 292 185 7 24 287 37 322 3.40e-22 95.5
Msa0782030 AT5G63580.1 31.739 230 143 7 1 222 15 238 4.02e-22 93.6
Msa0782030 AT1G02400.1 27.103 321 200 14 4 306 23 327 9.77e-22 94.0
Msa0782030 AT1G04380.2 29.870 231 137 8 6 224 46 263 2.79e-21 91.7
Msa0782030 AT4G23340.2 31.818 198 118 8 115 305 1 188 1.40e-19 85.9
Msa0782030 AT1G14130.1 25.249 301 206 8 5 299 9 296 6.00e-19 85.9
Msa0782030 AT1G47990.1 24.684 316 193 10 4 295 14 308 6.36e-19 86.3
Msa0782030 AT3G49630.2 31.053 190 122 5 102 287 60 244 3.22e-18 83.2
Msa0782030 AT3G46500.5 25.784 287 186 10 21 287 30 309 1.25e-17 82.4
Msa0782030 AT5G58660.2 25.692 253 147 11 3 224 32 274 5.19e-17 80.1
Msa0782030 AT1G52820.1 24.653 288 179 8 21 290 32 299 1.03e-16 79.7
Msa0782030 AT3G50210.2 27.979 193 130 4 102 287 50 240 2.93e-16 77.4
Msa0782030 AT5G51810.2 25.941 239 157 7 3 227 61 293 2.97e-16 78.2
Msa0782030 AT3G46490.1 25.890 309 182 12 25 299 34 329 4.63e-16 78.2
Msa0782030 AT1G35190.2 26.364 330 186 14 2 299 1 305 1.01e-15 76.6
Msa0782030 AT1G14120.2 25.296 253 173 6 5 251 8 250 2.30e-15 75.9
Msa0782030 AT1G14120.1 25.296 253 173 6 5 251 8 250 2.30e-15 75.9
Msa0782030 AT1G14120.3 25.296 253 173 6 5 251 8 250 2.30e-15 75.9
Msa0782030 AT1G35190.1 24.706 340 202 13 2 299 1 328 2.77e-15 75.9
Msa0782030 AT3G46500.7 25.591 254 165 9 21 254 30 279 3.36e-14 72.4
Msa0782030 AT4G22870.1 34.375 96 59 2 193 287 2 94 7.16e-14 67.4
Msa0782030 AT4G03070.1 29.944 177 115 5 118 290 133 304 1.06e-12 68.2
Msa0782030 AT4G16765.3 27.568 185 110 8 110 283 58 229 2.70e-12 65.9
Msa0782030 AT4G16765.6 27.225 191 116 8 110 288 58 237 3.10e-12 65.9
Msa0782030 AT4G16765.1 27.225 191 116 8 110 288 58 237 3.10e-12 65.9
Msa0782030 AT4G16765.2 27.225 191 116 8 110 288 58 237 3.10e-12 65.9
Msa0782030 AT3G46480.1 34.783 138 72 7 174 300 156 286 2.59e-11 63.5

Find 97 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCTTCAAACACAAATTT+TGG 0.052810 5_2:+64693794 None:intergenic
GAAAGAATCAAATGTTAATT+TGG 0.112620 5_2:-64693714 Msa0782030:CDS
AATTAACATTTGATTCTTTC+AGG 0.123673 5_2:+64693717 None:intergenic
AGTTTCTCCAAGCTAATAAT+TGG 0.192763 5_2:+64695424 None:intergenic
CCCTTCACCAGCTCTGGATT+TGG 0.233913 5_2:+64694677 None:intergenic
ATCTCTGAAATGTTTGATTC+AGG 0.255183 5_2:+64695040 None:intergenic
ATGCATGGAGCATAGGTTTA+AGG 0.281531 5_2:-64695149 Msa0782030:CDS
GAAACTAGCAGAAGAGCTTT+TGG 0.288781 5_2:-64694807 Msa0782030:CDS
TCTTTCAGGGCTTCAAATCT+TGG 0.295919 5_2:+64693731 None:intergenic
TAAGGATGCTTGTGAGAATT+GGG 0.296497 5_2:-64695365 Msa0782030:CDS
AGAGAAAGGTTACCTTAAAA+AGG 0.302113 5_2:-64694759 Msa0782030:CDS
TGGTATACCCCATGACCTTA+TGG 0.305963 5_2:-64695209 Msa0782030:CDS
TTAAGGATGCTTGTGAGAAT+TGG 0.311709 5_2:-64695366 Msa0782030:CDS
CCTTCACCAGCTCTGGATTT+GGG 0.325710 5_2:+64694678 None:intergenic
AGACACCATGGGGAAAATTA+AGG 0.339546 5_2:-64695383 Msa0782030:CDS
GCATTTCCTATAGTGCTCTT+TGG 0.346722 5_2:+64695168 None:intergenic
GGATCAAGAGGACCAACTTT+TGG 0.347061 5_2:-64694728 Msa0782030:CDS
CCATATCTTTGACTTCAGTT+TGG 0.348245 5_2:+64695095 None:intergenic
CAACAATAGAGTGGCGCATT+GGG 0.358833 5_2:+64694552 None:intergenic
CCAAACTGAAGTCAAAGATA+TGG 0.358927 5_2:-64695095 Msa0782030:CDS
AAAGAATCAAATGTTAATTT+GGG 0.360868 5_2:-64693713 Msa0782030:CDS
TTTCATTAAACAATTGCAAT+TGG 0.371062 5_2:+64693689 None:intergenic
CTACCCTGCTCCAGAATTGT+TGG 0.373517 5_2:-64693849 Msa0782030:CDS
AGGAATCATCCTTCTCTTCC+AGG 0.379674 5_2:-64694630 Msa0782030:CDS
GAACTTCCCAATTATTAGCT+TGG 0.395893 5_2:-64695431 Msa0782030:CDS
TGAGAATTGGGGATTCTTTG+AGG 0.409466 5_2:-64695353 Msa0782030:intron
CGAAGACCCTTCACCAGCTC+TGG 0.409771 5_2:+64694671 None:intergenic
TAAACAAGTAAAATAAATAT+AGG 0.411008 5_2:-64693664 Msa0782030:three_prime_UTR
ATTTGGGCATTGAGGGTAGT+TGG 0.418782 5_2:+64694694 None:intergenic
GGTTGACCAAAGAGCACTAT+AGG 0.423088 5_2:-64695174 Msa0782030:CDS
TGTACAACTTTGTAACTTGA+AGG 0.431335 5_2:-64693447 Msa0782030:three_prime_UTR
GGCCATCTTTGAGCAATTGT+AGG 0.439962 5_2:+64694591 None:intergenic
CTGAAGTCAAAGATATGGAT+TGG 0.440295 5_2:-64695090 Msa0782030:CDS
CCTTCTCTTCCAGGATGATA+AGG 0.441979 5_2:-64694621 Msa0782030:CDS
CGTGTGATAGCACAAACTAA+TGG 0.447838 5_2:-64693923 Msa0782030:CDS
ATTAACATTTGATTCTTTCA+GGG 0.452549 5_2:+64693718 None:intergenic
GCTCTGGATTTGGGCATTGA+GGG 0.456238 5_2:+64694687 None:intergenic
GATGTGTTATGTGAGAATCT+TGG 0.458480 5_2:-64694785 Msa0782030:CDS
TCTCTGAAATGTTTGATTCA+GGG 0.461275 5_2:+64695041 None:intergenic
ACTATATTTATCATATATGT+TGG 0.464707 5_2:+64693291 None:intergenic
TTGAGGGTAGTTGGCTACCT+TGG 0.468721 5_2:+64694703 None:intergenic
TACAAACAGGTAATAACAAA+TGG 0.471726 5_2:-64693968 Msa0782030:intron
GTTTCTCCAAGCTAATAATT+GGG 0.475738 5_2:+64695425 None:intergenic
CAAATCTTGGTTCCTTAGCA+TGG 0.476462 5_2:+64693744 None:intergenic
ACCTCTCCAATGTGTCCATA+AGG 0.477763 5_2:+64695194 None:intergenic
AGCTCTGGATTTGGGCATTG+AGG 0.479340 5_2:+64694686 None:intergenic
CTGATCTCAGTGATGAATAC+AGG 0.479662 5_2:-64695015 Msa0782030:intron
CACTCTATTGTTGTCAACCT+TGG 0.486458 5_2:-64694542 Msa0782030:CDS
CTTCGTGCTCACACCGATGC+CGG 0.487587 5_2:-64694653 Msa0782030:CDS
GCTACCTTGGTGCCAAAAGT+TGG 0.489227 5_2:+64694716 None:intergenic
TGCTTTGAAATTCCATGCTA+AGG 0.494834 5_2:-64693756 Msa0782030:CDS
TGAAGTCAAAGATATGGATT+GGG 0.504452 5_2:-64695089 Msa0782030:CDS
CCAATGTGTCCATAAGGTCA+TGG 0.507048 5_2:+64695200 None:intergenic
ATTAGCTTGGAGAAACTCAA+TGG 0.508564 5_2:-64695418 Msa0782030:CDS
GAAACAAATTTACCTCAAGT+TGG 0.510428 5_2:+64694516 None:intergenic
CAATGTGTCCATAAGGTCAT+GGG 0.512658 5_2:+64695201 None:intergenic
ACAACAATAGAGTGGCGCAT+TGG 0.513038 5_2:+64694551 None:intergenic
AAGGATGCTTGTGAGAATTG+GGG 0.513241 5_2:-64695364 Msa0782030:CDS
CTGTATTCATCACTGAGATC+AGG 0.514220 5_2:+64695016 None:intergenic
AAACTCTAGCTGGTGAATCA+TGG 0.516202 5_2:-64695229 Msa0782030:intron
GGCCTACAATTGCTCAAAGA+TGG 0.522007 5_2:-64694593 Msa0782030:CDS
TAGATTACAGCATCACTCCC+AGG 0.527198 5_2:+64693869 None:intergenic
GAAGAGAAGGATGATTCCTC+CGG 0.529315 5_2:+64694634 None:intergenic
CCTTATCATCCTGGAAGAGA+AGG 0.530340 5_2:+64694621 None:intergenic
GGCCACTGACCTTATCATCC+TGG 0.531916 5_2:+64694612 None:intergenic
ATAGCATCATTCTACAACCC+TGG 0.534295 5_2:-64693887 Msa0782030:CDS
CGTGTACAGGAAAGTGATGA+AGG 0.546835 5_2:-64694849 Msa0782030:intron
CCCAAATCCAGAGCTGGTGA+AGG 0.554109 5_2:-64694678 Msa0782030:CDS
ATTCAGGGAGGTGACGAACA+TGG 0.554465 5_2:+64695056 None:intergenic
ATAGGAAATGCATGGAGCAT+AGG 0.560098 5_2:-64695156 Msa0782030:CDS
GAGAATCTTGGACTAGAGAA+AGG 0.561460 5_2:-64694773 Msa0782030:CDS
AAGGATGATTCCTCCGGCAT+CGG 0.565016 5_2:+64694640 None:intergenic
CCATGACCTTATGGACACAT+TGG 0.572011 5_2:-64695200 Msa0782030:CDS
AACAATAGAGTGGCGCATTG+GGG 0.574691 5_2:+64694553 None:intergenic
TAGCATCATTCTACAACCCT+GGG 0.578286 5_2:-64693886 Msa0782030:CDS
AGGGTTGTAGAATGATGCTA+TGG 0.587289 5_2:+64693889 None:intergenic
TCAATGCCCAAATCCAGAGC+TGG 0.593557 5_2:-64694684 Msa0782030:CDS
CAACCTTGGTGACCAACTTG+AGG 0.598103 5_2:-64694528 Msa0782030:intron
AAGGAAGTAATATCAAGCAA+AGG 0.598298 5_2:-64695130 Msa0782030:CDS
GTTGAGAGAAAAGACACCAT+GGG 0.604441 5_2:-64695394 Msa0782030:CDS
AGGGAGGTGACGAACATGGA+AGG 0.611334 5_2:+64695060 None:intergenic
TTTCCAACAATTCTGGAGCA+GGG 0.614872 5_2:+64693846 None:intergenic
CCAAATCCAGAGCTGGTGAA+GGG 0.626529 5_2:-64694677 Msa0782030:CDS
TTACCTCAAGTTGGTCACCA+AGG 0.629532 5_2:+64694525 None:intergenic
AGAGCACTATAGGAAATGCA+TGG 0.631438 5_2:-64695164 Msa0782030:CDS
AGATTACAGCATCACTCCCA+GGG 0.637479 5_2:+64693870 None:intergenic
TTCCAGGATGATAAGGTCAG+TGG 0.639547 5_2:-64694614 Msa0782030:CDS
AAATGGCAAGTACAAGAGTG+TGG 0.640556 5_2:-64693951 Msa0782030:CDS
CGTGCTCACACCGATGCCGG+AGG 0.645285 5_2:-64694650 Msa0782030:CDS
ACAATAGAGTGGCGCATTGG+GGG 0.650237 5_2:+64694554 None:intergenic
TGTTGAGAGAAAAGACACCA+TGG 0.653529 5_2:-64695395 Msa0782030:CDS
AATTGCTCAAAGATGGCCAG+TGG 0.660439 5_2:-64694586 Msa0782030:CDS
CAAGGTTGACAACAATAGAG+TGG 0.673016 5_2:+64694543 None:intergenic
CTGAAATGTTTGATTCAGGG+AGG 0.675587 5_2:+64695044 None:intergenic
ACCTTATGGACACATTGGAG+AGG 0.684850 5_2:-64695195 Msa0782030:CDS
AATGTGTCCATAAGGTCATG+GGG 0.688791 5_2:+64695202 None:intergenic
TTGAGAGAAAAGACACCATG+GGG 0.727414 5_2:-64695393 Msa0782030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAAAAATATATTTAA+GGG + chr5_2:64693484-64693503 None:intergenic 0.0%
!! AAATTAAAAAAATATATTTA+AGG + chr5_2:64693485-64693504 None:intergenic 0.0%
!! AATTAAAAAAATATATTTAA+GGG + chr5_2:64693484-64693503 None:intergenic 0.0%
!! AAATTAAAAAAATATATTTA+AGG + chr5_2:64693485-64693504 None:intergenic 0.0%
!!! GTTTTAATTTTTTTTTTTGT+AGG + chr5_2:64694496-64694515 None:intergenic 10.0%
!! TAAACAAGTAAAATAAATAT+AGG - chr5_2:64695120-64695139 Msa0782030:CDS 10.0%
!!! TTGTAAACTTTTTTTTTTTA+CGG - chr5_2:64695313-64695332 Msa0782030:intron 10.0%
!!! GTTTTAATTTTTTTTTTTGT+AGG + chr5_2:64694496-64694515 None:intergenic 10.0%
!! TAAACAAGTAAAATAAATAT+AGG - chr5_2:64695120-64695139 Msa0782030:CDS 10.0%
!!! TTGTAAACTTTTTTTTTTTA+CGG - chr5_2:64695313-64695332 Msa0782030:intron 10.0%
!! AAAGAATCAAATGTTAATTT+GGG - chr5_2:64695071-64695090 Msa0782030:CDS 15.0%
!!! TGTAAACTTTTTTTTTTTAC+GGG - chr5_2:64695314-64695333 Msa0782030:intron 15.0%
!! ACTATATTTATCATATATGT+TGG + chr5_2:64695496-64695515 None:intergenic 15.0%
!! AAAGAATCAAATGTTAATTT+GGG - chr5_2:64695071-64695090 Msa0782030:CDS 15.0%
!!! TGTAAACTTTTTTTTTTTAC+GGG - chr5_2:64695314-64695333 Msa0782030:intron 15.0%
!! ACTATATTTATCATATATGT+TGG + chr5_2:64695496-64695515 None:intergenic 15.0%
!! TCATGATTCTAAATTTCTTA+TGG - chr5_2:64693906-64693925 Msa0782030:CDS 20.0%
!! CTAAATCTTGATTATATTGA+CGG - chr5_2:64694443-64694462 Msa0782030:intron 20.0%
!! AAAATACCAAGTTTGAAAAT+TGG + chr5_2:64694537-64694556 None:intergenic 20.0%
!!! CTAATATTTTTTGTCACATT+AGG + chr5_2:64694690-64694709 None:intergenic 20.0%
!! CTAATATGAAAAATCATCTA+AGG - chr5_2:64694713-64694732 Msa0782030:CDS 20.0%
!! ATTAACATTTGATTCTTTCA+GGG + chr5_2:64695069-64695088 None:intergenic 20.0%
!! AATTAACATTTGATTCTTTC+AGG + chr5_2:64695070-64695089 None:intergenic 20.0%
!! GAAAGAATCAAATGTTAATT+TGG - chr5_2:64695070-64695089 Msa0782030:CDS 20.0%
!! TTTCATTAAACAATTGCAAT+TGG + chr5_2:64695098-64695117 None:intergenic 20.0%
!! TCATGATTCTAAATTTCTTA+TGG - chr5_2:64693906-64693925 Msa0782030:CDS 20.0%
!! CTAAATCTTGATTATATTGA+CGG - chr5_2:64694443-64694462 Msa0782030:intron 20.0%
!! AAAATACCAAGTTTGAAAAT+TGG + chr5_2:64694537-64694556 None:intergenic 20.0%
!!! CTAATATTTTTTGTCACATT+AGG + chr5_2:64694690-64694709 None:intergenic 20.0%
!! CTAATATGAAAAATCATCTA+AGG - chr5_2:64694713-64694732 Msa0782030:CDS 20.0%
!! ATTAACATTTGATTCTTTCA+GGG + chr5_2:64695069-64695088 None:intergenic 20.0%
!! AATTAACATTTGATTCTTTC+AGG + chr5_2:64695070-64695089 None:intergenic 20.0%
!! GAAAGAATCAAATGTTAATT+TGG - chr5_2:64695070-64695089 Msa0782030:CDS 20.0%
!! TTTCATTAAACAATTGCAAT+TGG + chr5_2:64695098-64695117 None:intergenic 20.0%
!!! GTTAGATAATGTTACTTTCT+TGG - chr5_2:64693505-64693524 Msa0782030:three_prime_UTR 25.0%
! TGCTTCTACAAAATCATATA+TGG + chr5_2:64693884-64693903 None:intergenic 25.0%
!!! TACCTTAAAAAGGCATTTTA+TGG - chr5_2:64694035-64694054 Msa0782030:intron 25.0%
!! ATCCATAAAATGCCTTTTTA+AGG + chr5_2:64694040-64694059 None:intergenic 25.0%
! AAGGGTTGTTAAACAATTTA+TGG + chr5_2:64694386-64694405 None:intergenic 25.0%
!! AAAGATCCAATTTTCAAACT+TGG - chr5_2:64694528-64694547 Msa0782030:intron 25.0%
! TGAAAAATCATCTAAGGATA+CGG - chr5_2:64694719-64694738 Msa0782030:CDS 25.0%
! TACAAACAGGTAATAACAAA+TGG - chr5_2:64694816-64694835 Msa0782030:CDS 25.0%
!! ACTCTTCAAACACAAATTTT+GGG + chr5_2:64694992-64695011 None:intergenic 25.0%
!! TACTCTTCAAACACAAATTT+TGG + chr5_2:64694993-64695012 None:intergenic 25.0%
!! GAAAAAAACTCACATTTTGT+AGG - chr5_2:64695260-64695279 Msa0782030:intron 25.0%
!! TTTTTCTTTATGCATGTTAG+AGG + chr5_2:64693275-64693294 None:intergenic 25.0%
!!! GTTAGATAATGTTACTTTCT+TGG - chr5_2:64693505-64693524 Msa0782030:three_prime_UTR 25.0%
! TGCTTCTACAAAATCATATA+TGG + chr5_2:64693884-64693903 None:intergenic 25.0%
!!! TACCTTAAAAAGGCATTTTA+TGG - chr5_2:64694035-64694054 Msa0782030:intron 25.0%
!! ATCCATAAAATGCCTTTTTA+AGG + chr5_2:64694040-64694059 None:intergenic 25.0%
! AAGGGTTGTTAAACAATTTA+TGG + chr5_2:64694386-64694405 None:intergenic 25.0%
!! AAAGATCCAATTTTCAAACT+TGG - chr5_2:64694528-64694547 Msa0782030:intron 25.0%
! TGAAAAATCATCTAAGGATA+CGG - chr5_2:64694719-64694738 Msa0782030:CDS 25.0%
! TACAAACAGGTAATAACAAA+TGG - chr5_2:64694816-64694835 Msa0782030:CDS 25.0%
!! ACTCTTCAAACACAAATTTT+GGG + chr5_2:64694992-64695011 None:intergenic 25.0%
!! TACTCTTCAAACACAAATTT+TGG + chr5_2:64694993-64695012 None:intergenic 25.0%
!! GAAAAAAACTCACATTTTGT+AGG - chr5_2:64695260-64695279 Msa0782030:intron 25.0%
GTTTCTCCAAGCTAATAATT+GGG + chr5_2:64693362-64693381 None:intergenic 30.0%
AGTTTCTCCAAGCTAATAAT+TGG + chr5_2:64693363-64693382 None:intergenic 30.0%
AAGGAAGTAATATCAAGCAA+AGG - chr5_2:64693654-64693673 Msa0782030:three_prime_UTR 30.0%
TGAAGTCAAAGATATGGATT+GGG - chr5_2:64693695-64693714 Msa0782030:CDS 30.0%
!! TCTCTGAAATGTTTGATTCA+GGG + chr5_2:64693746-64693765 None:intergenic 30.0%
!! ATCTCTGAAATGTTTGATTC+AGG + chr5_2:64693747-64693766 None:intergenic 30.0%
! TGATGAAGGATTTTTCTTTG+AGG - chr5_2:64693949-64693968 Msa0782030:CDS 30.0%
AGAGAAAGGTTACCTTAAAA+AGG - chr5_2:64694025-64694044 Msa0782030:intron 30.0%
GAAACAAATTTACCTCAAGT+TGG + chr5_2:64694271-64694290 None:intergenic 30.0%
AATTGAAATGAGAGTTGACT+TGG + chr5_2:64694299-64694318 None:intergenic 30.0%
!!! TTTTTTGTAGGCTACAACAT+GGG + chr5_2:64694484-64694503 None:intergenic 30.0%
!!! TTTTTTTGTAGGCTACAACA+TGG + chr5_2:64694485-64694504 None:intergenic 30.0%
CGTAAAAAATTTGACTGCAA+AGG - chr5_2:64694632-64694651 Msa0782030:CDS 30.0%
CTTATGTCAAATCTTGTGTA+TGG + chr5_2:64694660-64694679 None:intergenic 30.0%
! TTTTTGTCACATTAGGAGTA+TGG + chr5_2:64694683-64694702 None:intergenic 30.0%
ATCTTTCATGTGCAAAAAAC+AGG - chr5_2:64694770-64694789 Msa0782030:CDS 30.0%
! TGACACTATTTTGTACAAAC+AGG - chr5_2:64694803-64694822 Msa0782030:CDS 30.0%
TGTACAACTTTGTAACTTGA+AGG - chr5_2:64695337-64695356 Msa0782030:intron 30.0%
GTTTCTCCAAGCTAATAATT+GGG + chr5_2:64693362-64693381 None:intergenic 30.0%
AGTTTCTCCAAGCTAATAAT+TGG + chr5_2:64693363-64693382 None:intergenic 30.0%
AAGGAAGTAATATCAAGCAA+AGG - chr5_2:64693654-64693673 Msa0782030:three_prime_UTR 30.0%
TGAAGTCAAAGATATGGATT+GGG - chr5_2:64693695-64693714 Msa0782030:CDS 30.0%
!! TCTCTGAAATGTTTGATTCA+GGG + chr5_2:64693746-64693765 None:intergenic 30.0%
!! ATCTCTGAAATGTTTGATTC+AGG + chr5_2:64693747-64693766 None:intergenic 30.0%
! TGATGAAGGATTTTTCTTTG+AGG - chr5_2:64693949-64693968 Msa0782030:CDS 30.0%
AGAGAAAGGTTACCTTAAAA+AGG - chr5_2:64694025-64694044 Msa0782030:intron 30.0%
GAAACAAATTTACCTCAAGT+TGG + chr5_2:64694271-64694290 None:intergenic 30.0%
AATTGAAATGAGAGTTGACT+TGG + chr5_2:64694299-64694318 None:intergenic 30.0%
!!! TTTTTTGTAGGCTACAACAT+GGG + chr5_2:64694484-64694503 None:intergenic 30.0%
!!! TTTTTTTGTAGGCTACAACA+TGG + chr5_2:64694485-64694504 None:intergenic 30.0%
CGTAAAAAATTTGACTGCAA+AGG - chr5_2:64694632-64694651 Msa0782030:CDS 30.0%
CTTATGTCAAATCTTGTGTA+TGG + chr5_2:64694660-64694679 None:intergenic 30.0%
! TTTTTGTCACATTAGGAGTA+TGG + chr5_2:64694683-64694702 None:intergenic 30.0%
ATCTTTCATGTGCAAAAAAC+AGG - chr5_2:64694770-64694789 Msa0782030:CDS 30.0%
! TGACACTATTTTGTACAAAC+AGG - chr5_2:64694803-64694822 Msa0782030:CDS 30.0%
TGTACAACTTTGTAACTTGA+AGG - chr5_2:64695337-64695356 Msa0782030:intron 30.0%
GAACTTCCCAATTATTAGCT+TGG - chr5_2:64693353-64693372 Msa0782030:three_prime_UTR 35.0%
! ATTAGCTTGGAGAAACTCAA+TGG - chr5_2:64693366-64693385 Msa0782030:three_prime_UTR 35.0%
TTAAGGATGCTTGTGAGAAT+TGG - chr5_2:64693418-64693437 Msa0782030:three_prime_UTR 35.0%
TAAGGATGCTTGTGAGAATT+GGG - chr5_2:64693419-64693438 Msa0782030:three_prime_UTR 35.0%
TTTCCTTTCAAAACTCTAGC+TGG - chr5_2:64693545-64693564 Msa0782030:three_prime_UTR 35.0%
! CCATATCTTTGACTTCAGTT+TGG + chr5_2:64693692-64693711 None:intergenic 35.0%
CCAAACTGAAGTCAAAGATA+TGG - chr5_2:64693689-64693708 Msa0782030:exon 35.0%
CTGAAGTCAAAGATATGGAT+TGG - chr5_2:64693694-64693713 Msa0782030:CDS 35.0%
GATGTGTTATGTGAGAATCT+TGG - chr5_2:64693999-64694018 Msa0782030:intron 35.0%
!! AAGGCATTTTATGGATCAAG+AGG - chr5_2:64694044-64694063 Msa0782030:intron 35.0%
GTGTAAAGTGAGAAAGTCAA+GGG + chr5_2:64694404-64694423 None:intergenic 35.0%
AGTGTAAAGTGAGAAAGTCA+AGG + chr5_2:64694405-64694424 None:intergenic 35.0%
TTACACTTTACTCACGTTAG+AGG - chr5_2:64694418-64694437 Msa0782030:intron 35.0%
! TTTTTGTAGGCTACAACATG+GGG + chr5_2:64694483-64694502 None:intergenic 35.0%
TTTGATGAAGTGAGATCAGA+TGG + chr5_2:64694601-64694620 None:intergenic 35.0%
TCTCACTTCATCAAAATACG+TGG - chr5_2:64694606-64694625 Msa0782030:CDS 35.0%
! GCATGTTTTTCCAACAATTC+TGG + chr5_2:64694948-64694967 None:intergenic 35.0%
ATTGTTGGAAAAACATGCAG+AGG - chr5_2:64694950-64694969 Msa0782030:intron 35.0%
!! TGCTTTGAAATTCCATGCTA+AGG - chr5_2:64695028-64695047 Msa0782030:CDS 35.0%
GAACTTCCCAATTATTAGCT+TGG - chr5_2:64693353-64693372 Msa0782030:three_prime_UTR 35.0%
! ATTAGCTTGGAGAAACTCAA+TGG - chr5_2:64693366-64693385 Msa0782030:three_prime_UTR 35.0%
TTAAGGATGCTTGTGAGAAT+TGG - chr5_2:64693418-64693437 Msa0782030:three_prime_UTR 35.0%
TAAGGATGCTTGTGAGAATT+GGG - chr5_2:64693419-64693438 Msa0782030:three_prime_UTR 35.0%
TTTCCTTTCAAAACTCTAGC+TGG - chr5_2:64693545-64693564 Msa0782030:three_prime_UTR 35.0%
! CCATATCTTTGACTTCAGTT+TGG + chr5_2:64693692-64693711 None:intergenic 35.0%
CCAAACTGAAGTCAAAGATA+TGG - chr5_2:64693689-64693708 Msa0782030:exon 35.0%
CTGAAGTCAAAGATATGGAT+TGG - chr5_2:64693694-64693713 Msa0782030:CDS 35.0%
GATGTGTTATGTGAGAATCT+TGG - chr5_2:64693999-64694018 Msa0782030:intron 35.0%
!! AAGGCATTTTATGGATCAAG+AGG - chr5_2:64694044-64694063 Msa0782030:intron 35.0%
GTGTAAAGTGAGAAAGTCAA+GGG + chr5_2:64694404-64694423 None:intergenic 35.0%
AGTGTAAAGTGAGAAAGTCA+AGG + chr5_2:64694405-64694424 None:intergenic 35.0%
TTACACTTTACTCACGTTAG+AGG - chr5_2:64694418-64694437 Msa0782030:intron 35.0%
! TTTTTGTAGGCTACAACATG+GGG + chr5_2:64694483-64694502 None:intergenic 35.0%
TTTGATGAAGTGAGATCAGA+TGG + chr5_2:64694601-64694620 None:intergenic 35.0%
TCTCACTTCATCAAAATACG+TGG - chr5_2:64694606-64694625 Msa0782030:CDS 35.0%
! GCATGTTTTTCCAACAATTC+TGG + chr5_2:64694948-64694967 None:intergenic 35.0%
ATTGTTGGAAAAACATGCAG+AGG - chr5_2:64694950-64694969 Msa0782030:intron 35.0%
!! TGCTTTGAAATTCCATGCTA+AGG - chr5_2:64695028-64695047 Msa0782030:CDS 35.0%
TGTTGAGAGAAAAGACACCA+TGG - chr5_2:64693389-64693408 Msa0782030:three_prime_UTR 40.0%
GTTGAGAGAAAAGACACCAT+GGG - chr5_2:64693390-64693409 Msa0782030:three_prime_UTR 40.0%
TTGAGAGAAAAGACACCATG+GGG - chr5_2:64693391-64693410 Msa0782030:three_prime_UTR 40.0%
AGACACCATGGGGAAAATTA+AGG - chr5_2:64693401-64693420 Msa0782030:three_prime_UTR 40.0%
! AGCATCCTTAATTTTCCCCA+TGG + chr5_2:64693409-64693428 None:intergenic 40.0%
AAGGATGCTTGTGAGAATTG+GGG - chr5_2:64693420-64693439 Msa0782030:three_prime_UTR 40.0%
TGAGAATTGGGGATTCTTTG+AGG - chr5_2:64693431-64693450 Msa0782030:three_prime_UTR 40.0%
!!! TCACCAGCTAGAGTTTTGAA+AGG + chr5_2:64693551-64693570 None:intergenic 40.0%
AAACTCTAGCTGGTGAATCA+TGG - chr5_2:64693555-64693574 Msa0782030:three_prime_UTR 40.0%
AATGTGTCCATAAGGTCATG+GGG + chr5_2:64693585-64693604 None:intergenic 40.0%
CAATGTGTCCATAAGGTCAT+GGG + chr5_2:64693586-64693605 None:intergenic 40.0%
GCATTTCCTATAGTGCTCTT+TGG + chr5_2:64693619-64693638 None:intergenic 40.0%
! AGAGCACTATAGGAAATGCA+TGG - chr5_2:64693620-64693639 Msa0782030:three_prime_UTR 40.0%
ATAGGAAATGCATGGAGCAT+AGG - chr5_2:64693628-64693647 Msa0782030:three_prime_UTR 40.0%
ATGCATGGAGCATAGGTTTA+AGG - chr5_2:64693635-64693654 Msa0782030:three_prime_UTR 40.0%
CTGAAATGTTTGATTCAGGG+AGG + chr5_2:64693743-64693762 None:intergenic 40.0%
CTGTATTCATCACTGAGATC+AGG + chr5_2:64693771-64693790 None:intergenic 40.0%
CTGATCTCAGTGATGAATAC+AGG - chr5_2:64693769-64693788 Msa0782030:CDS 40.0%
CTTATGGTAATTGCGTGTAC+AGG - chr5_2:64693922-64693941 Msa0782030:CDS 40.0%
! GAAACTAGCAGAAGAGCTTT+TGG - chr5_2:64693977-64693996 Msa0782030:intron 40.0%
! GAGAATCTTGGACTAGAGAA+AGG - chr5_2:64694011-64694030 Msa0782030:intron 40.0%
CAAGGTTGACAACAATAGAG+TGG + chr5_2:64694244-64694263 None:intergenic 40.0%
CACTCTATTGTTGTCAACCT+TGG - chr5_2:64694242-64694261 Msa0782030:intron 40.0%
!! AATGAGAGTTGACTTGGCAA+AGG + chr5_2:64694293-64694312 None:intergenic 40.0%
TCCATATTAGTCCTTCGATC+TGG - chr5_2:64694338-64694357 Msa0782030:intron 40.0%
AAATGGCAAGTACAAGAGTG+TGG - chr5_2:64694833-64694852 Msa0782030:CDS 40.0%
CGTGTGATAGCACAAACTAA+TGG - chr5_2:64694861-64694880 Msa0782030:intron 40.0%
AGGGTTGTAGAATGATGCTA+TGG + chr5_2:64694898-64694917 None:intergenic 40.0%
ATAGCATCATTCTACAACCC+TGG - chr5_2:64694897-64694916 Msa0782030:intron 40.0%
TAGCATCATTCTACAACCCT+GGG - chr5_2:64694898-64694917 Msa0782030:intron 40.0%
!! TTTCCAACAATTCTGGAGCA+GGG + chr5_2:64694941-64694960 None:intergenic 40.0%
!!! TTTTCCAACAATTCTGGAGC+AGG + chr5_2:64694942-64694961 None:intergenic 40.0%
CAAATCTTGGTTCCTTAGCA+TGG + chr5_2:64695043-64695062 None:intergenic 40.0%
TCTTTCAGGGCTTCAAATCT+TGG + chr5_2:64695056-64695075 None:intergenic 40.0%
TGTTGAGAGAAAAGACACCA+TGG - chr5_2:64693389-64693408 Msa0782030:three_prime_UTR 40.0%
GTTGAGAGAAAAGACACCAT+GGG - chr5_2:64693390-64693409 Msa0782030:three_prime_UTR 40.0%
TTGAGAGAAAAGACACCATG+GGG - chr5_2:64693391-64693410 Msa0782030:three_prime_UTR 40.0%
AGACACCATGGGGAAAATTA+AGG - chr5_2:64693401-64693420 Msa0782030:three_prime_UTR 40.0%
! AGCATCCTTAATTTTCCCCA+TGG + chr5_2:64693409-64693428 None:intergenic 40.0%
AAGGATGCTTGTGAGAATTG+GGG - chr5_2:64693420-64693439 Msa0782030:three_prime_UTR 40.0%
TGAGAATTGGGGATTCTTTG+AGG - chr5_2:64693431-64693450 Msa0782030:three_prime_UTR 40.0%
!!! TCACCAGCTAGAGTTTTGAA+AGG + chr5_2:64693551-64693570 None:intergenic 40.0%
AAACTCTAGCTGGTGAATCA+TGG - chr5_2:64693555-64693574 Msa0782030:three_prime_UTR 40.0%
AATGTGTCCATAAGGTCATG+GGG + chr5_2:64693585-64693604 None:intergenic 40.0%
CAATGTGTCCATAAGGTCAT+GGG + chr5_2:64693586-64693605 None:intergenic 40.0%
GCATTTCCTATAGTGCTCTT+TGG + chr5_2:64693619-64693638 None:intergenic 40.0%
! AGAGCACTATAGGAAATGCA+TGG - chr5_2:64693620-64693639 Msa0782030:three_prime_UTR 40.0%
ATAGGAAATGCATGGAGCAT+AGG - chr5_2:64693628-64693647 Msa0782030:three_prime_UTR 40.0%
ATGCATGGAGCATAGGTTTA+AGG - chr5_2:64693635-64693654 Msa0782030:three_prime_UTR 40.0%
CTGAAATGTTTGATTCAGGG+AGG + chr5_2:64693743-64693762 None:intergenic 40.0%
CTGTATTCATCACTGAGATC+AGG + chr5_2:64693771-64693790 None:intergenic 40.0%
CTGATCTCAGTGATGAATAC+AGG - chr5_2:64693769-64693788 Msa0782030:CDS 40.0%
CTTATGGTAATTGCGTGTAC+AGG - chr5_2:64693922-64693941 Msa0782030:CDS 40.0%
! GAAACTAGCAGAAGAGCTTT+TGG - chr5_2:64693977-64693996 Msa0782030:intron 40.0%
! GAGAATCTTGGACTAGAGAA+AGG - chr5_2:64694011-64694030 Msa0782030:intron 40.0%
CAAGGTTGACAACAATAGAG+TGG + chr5_2:64694244-64694263 None:intergenic 40.0%
CACTCTATTGTTGTCAACCT+TGG - chr5_2:64694242-64694261 Msa0782030:intron 40.0%
!! AATGAGAGTTGACTTGGCAA+AGG + chr5_2:64694293-64694312 None:intergenic 40.0%
TCCATATTAGTCCTTCGATC+TGG - chr5_2:64694338-64694357 Msa0782030:intron 40.0%
AAATGGCAAGTACAAGAGTG+TGG - chr5_2:64694833-64694852 Msa0782030:CDS 40.0%
CGTGTGATAGCACAAACTAA+TGG - chr5_2:64694861-64694880 Msa0782030:intron 40.0%
AGGGTTGTAGAATGATGCTA+TGG + chr5_2:64694898-64694917 None:intergenic 40.0%
ATAGCATCATTCTACAACCC+TGG - chr5_2:64694897-64694916 Msa0782030:intron 40.0%
TAGCATCATTCTACAACCCT+GGG - chr5_2:64694898-64694917 Msa0782030:intron 40.0%
!! TTTCCAACAATTCTGGAGCA+GGG + chr5_2:64694941-64694960 None:intergenic 40.0%
!!! TTTTCCAACAATTCTGGAGC+AGG + chr5_2:64694942-64694961 None:intergenic 40.0%
CAAATCTTGGTTCCTTAGCA+TGG + chr5_2:64695043-64695062 None:intergenic 40.0%
TCTTTCAGGGCTTCAAATCT+TGG + chr5_2:64695056-64695075 None:intergenic 40.0%
TGGTATACCCCATGACCTTA+TGG - chr5_2:64693575-64693594 Msa0782030:three_prime_UTR 45.0%
CCAATGTGTCCATAAGGTCA+TGG + chr5_2:64693587-64693606 None:intergenic 45.0%
CCATGACCTTATGGACACAT+TGG - chr5_2:64693584-64693603 Msa0782030:three_prime_UTR 45.0%
ACCTTATGGACACATTGGAG+AGG - chr5_2:64693589-64693608 Msa0782030:three_prime_UTR 45.0%
ACCTCTCCAATGTGTCCATA+AGG + chr5_2:64693593-64693612 None:intergenic 45.0%
!! GGTTGACCAAAGAGCACTAT+AGG - chr5_2:64693610-64693629 Msa0782030:three_prime_UTR 45.0%
CGTGTACAGGAAAGTGATGA+AGG - chr5_2:64693935-64693954 Msa0782030:CDS 45.0%
! GGATCAAGAGGACCAACTTT+TGG - chr5_2:64694056-64694075 Msa0782030:intron 45.0%
!! ATTTGGGCATTGAGGGTAGT+TGG + chr5_2:64694093-64694112 None:intergenic 45.0%
GAAGAGAAGGATGATTCCTC+CGG + chr5_2:64694153-64694172 None:intergenic 45.0%
AGGAATCATCCTTCTCTTCC+AGG - chr5_2:64694154-64694173 Msa0782030:intron 45.0%
CCTTATCATCCTGGAAGAGA+AGG + chr5_2:64694166-64694185 None:intergenic 45.0%
CCTTCTCTTCCAGGATGATA+AGG - chr5_2:64694163-64694182 Msa0782030:intron 45.0%
TTCCAGGATGATAAGGTCAG+TGG - chr5_2:64694170-64694189 Msa0782030:intron 45.0%
GGCCTACAATTGCTCAAAGA+TGG - chr5_2:64694191-64694210 Msa0782030:intron 45.0%
GGCCATCTTTGAGCAATTGT+AGG + chr5_2:64694196-64694215 None:intergenic 45.0%
AATTGCTCAAAGATGGCCAG+TGG - chr5_2:64694198-64694217 Msa0782030:intron 45.0%
AACAATAGAGTGGCGCATTG+GGG + chr5_2:64694234-64694253 None:intergenic 45.0%
CAACAATAGAGTGGCGCATT+GGG + chr5_2:64694235-64694254 None:intergenic 45.0%
ACAACAATAGAGTGGCGCAT+TGG + chr5_2:64694236-64694255 None:intergenic 45.0%
!! TTACCTCAAGTTGGTCACCA+AGG + chr5_2:64694262-64694281 None:intergenic 45.0%
GCCAGATCGAAGGACTAATA+TGG + chr5_2:64694342-64694361 None:intergenic 45.0%
! TTCGATCTGGCTCCTCTAAA+GGG - chr5_2:64694351-64694370 Msa0782030:intron 45.0%
!! TGGTTTGTTGCTCCCTTTAG+AGG + chr5_2:64694366-64694385 None:intergenic 45.0%
AGATTACAGCATCACTCCCA+GGG + chr5_2:64694917-64694936 None:intergenic 45.0%
TAGATTACAGCATCACTCCC+AGG + chr5_2:64694918-64694937 None:intergenic 45.0%
TGGTATACCCCATGACCTTA+TGG - chr5_2:64693575-64693594 Msa0782030:three_prime_UTR 45.0%
CCAATGTGTCCATAAGGTCA+TGG + chr5_2:64693587-64693606 None:intergenic 45.0%
CCATGACCTTATGGACACAT+TGG - chr5_2:64693584-64693603 Msa0782030:three_prime_UTR 45.0%
ACCTTATGGACACATTGGAG+AGG - chr5_2:64693589-64693608 Msa0782030:three_prime_UTR 45.0%
ACCTCTCCAATGTGTCCATA+AGG + chr5_2:64693593-64693612 None:intergenic 45.0%
!! GGTTGACCAAAGAGCACTAT+AGG - chr5_2:64693610-64693629 Msa0782030:three_prime_UTR 45.0%
CGTGTACAGGAAAGTGATGA+AGG - chr5_2:64693935-64693954 Msa0782030:CDS 45.0%
! GGATCAAGAGGACCAACTTT+TGG - chr5_2:64694056-64694075 Msa0782030:intron 45.0%
!! ATTTGGGCATTGAGGGTAGT+TGG + chr5_2:64694093-64694112 None:intergenic 45.0%
GAAGAGAAGGATGATTCCTC+CGG + chr5_2:64694153-64694172 None:intergenic 45.0%
AGGAATCATCCTTCTCTTCC+AGG - chr5_2:64694154-64694173 Msa0782030:intron 45.0%
CCTTATCATCCTGGAAGAGA+AGG + chr5_2:64694166-64694185 None:intergenic 45.0%
CCTTCTCTTCCAGGATGATA+AGG - chr5_2:64694163-64694182 Msa0782030:intron 45.0%
TTCCAGGATGATAAGGTCAG+TGG - chr5_2:64694170-64694189 Msa0782030:intron 45.0%
GGCCTACAATTGCTCAAAGA+TGG - chr5_2:64694191-64694210 Msa0782030:intron 45.0%
GGCCATCTTTGAGCAATTGT+AGG + chr5_2:64694196-64694215 None:intergenic 45.0%
AATTGCTCAAAGATGGCCAG+TGG - chr5_2:64694198-64694217 Msa0782030:intron 45.0%
AACAATAGAGTGGCGCATTG+GGG + chr5_2:64694234-64694253 None:intergenic 45.0%
CAACAATAGAGTGGCGCATT+GGG + chr5_2:64694235-64694254 None:intergenic 45.0%
ACAACAATAGAGTGGCGCAT+TGG + chr5_2:64694236-64694255 None:intergenic 45.0%
!! TTACCTCAAGTTGGTCACCA+AGG + chr5_2:64694262-64694281 None:intergenic 45.0%
GCCAGATCGAAGGACTAATA+TGG + chr5_2:64694342-64694361 None:intergenic 45.0%
! TTCGATCTGGCTCCTCTAAA+GGG - chr5_2:64694351-64694370 Msa0782030:intron 45.0%
!! TGGTTTGTTGCTCCCTTTAG+AGG + chr5_2:64694366-64694385 None:intergenic 45.0%
AGATTACAGCATCACTCCCA+GGG + chr5_2:64694917-64694936 None:intergenic 45.0%
TAGATTACAGCATCACTCCC+AGG + chr5_2:64694918-64694937 None:intergenic 45.0%
!! AAATGAAAAAAATAATAATT+AGG - chr5_2:64695163-64695182 Msa0782030:CDS 5.0%
!! AATGAAAAAAATAATAATTA+GGG - chr5_2:64695164-64695183 Msa0782030:CDS 5.0%
!! AAATGAAAAAAATAATAATT+AGG - chr5_2:64695163-64695182 Msa0782030:CDS 5.0%
!! AATGAAAAAAATAATAATTA+GGG - chr5_2:64695164-64695183 Msa0782030:CDS 5.0%
ATTCAGGGAGGTGACGAACA+TGG + chr5_2:64693731-64693750 None:intergenic 50.0%
! AGGACCAACTTTTGGCACCA+AGG - chr5_2:64694064-64694083 Msa0782030:intron 50.0%
!! GCTACCTTGGTGCCAAAAGT+TGG + chr5_2:64694071-64694090 None:intergenic 50.0%
TTGAGGGTAGTTGGCTACCT+TGG + chr5_2:64694084-64694103 None:intergenic 50.0%
!! GCTCTGGATTTGGGCATTGA+GGG + chr5_2:64694100-64694119 None:intergenic 50.0%
!! AGCTCTGGATTTGGGCATTG+AGG + chr5_2:64694101-64694120 None:intergenic 50.0%
TCAATGCCCAAATCCAGAGC+TGG - chr5_2:64694100-64694119 Msa0782030:intron 50.0%
!! CCTTCACCAGCTCTGGATTT+GGG + chr5_2:64694109-64694128 None:intergenic 50.0%
CCAAATCCAGAGCTGGTGAA+GGG - chr5_2:64694107-64694126 Msa0782030:intron 50.0%
AAGGATGATTCCTCCGGCAT+CGG + chr5_2:64694147-64694166 None:intergenic 50.0%
TTGGGGGAACATCAATCCAC+TGG + chr5_2:64694217-64694236 None:intergenic 50.0%
ACAATAGAGTGGCGCATTGG+GGG + chr5_2:64694233-64694252 None:intergenic 50.0%
! CAACCTTGGTGACCAACTTG+AGG - chr5_2:64694256-64694275 Msa0782030:intron 50.0%
! CTTTAGAGGAGCCAGATCGA+AGG + chr5_2:64694352-64694371 None:intergenic 50.0%
! CTTCGATCTGGCTCCTCTAA+AGG - chr5_2:64694350-64694369 Msa0782030:intron 50.0%
TTGTAGGCTACAACATGGGG+AGG + chr5_2:64694480-64694499 None:intergenic 50.0%
CTACCCTGCTCCAGAATTGT+TGG - chr5_2:64694935-64694954 Msa0782030:intron 50.0%
ATTCAGGGAGGTGACGAACA+TGG + chr5_2:64693731-64693750 None:intergenic 50.0%
! AGGACCAACTTTTGGCACCA+AGG - chr5_2:64694064-64694083 Msa0782030:intron 50.0%
!! GCTACCTTGGTGCCAAAAGT+TGG + chr5_2:64694071-64694090 None:intergenic 50.0%
TTGAGGGTAGTTGGCTACCT+TGG + chr5_2:64694084-64694103 None:intergenic 50.0%
!! GCTCTGGATTTGGGCATTGA+GGG + chr5_2:64694100-64694119 None:intergenic 50.0%
!! AGCTCTGGATTTGGGCATTG+AGG + chr5_2:64694101-64694120 None:intergenic 50.0%
TCAATGCCCAAATCCAGAGC+TGG - chr5_2:64694100-64694119 Msa0782030:intron 50.0%
!! CCTTCACCAGCTCTGGATTT+GGG + chr5_2:64694109-64694128 None:intergenic 50.0%
CCAAATCCAGAGCTGGTGAA+GGG - chr5_2:64694107-64694126 Msa0782030:intron 50.0%
AAGGATGATTCCTCCGGCAT+CGG + chr5_2:64694147-64694166 None:intergenic 50.0%
TTGGGGGAACATCAATCCAC+TGG + chr5_2:64694217-64694236 None:intergenic 50.0%
ACAATAGAGTGGCGCATTGG+GGG + chr5_2:64694233-64694252 None:intergenic 50.0%
! CAACCTTGGTGACCAACTTG+AGG - chr5_2:64694256-64694275 Msa0782030:intron 50.0%
! CTTTAGAGGAGCCAGATCGA+AGG + chr5_2:64694352-64694371 None:intergenic 50.0%
! CTTCGATCTGGCTCCTCTAA+AGG - chr5_2:64694350-64694369 Msa0782030:intron 50.0%
TTGTAGGCTACAACATGGGG+AGG + chr5_2:64694480-64694499 None:intergenic 50.0%
CTACCCTGCTCCAGAATTGT+TGG - chr5_2:64694935-64694954 Msa0782030:intron 50.0%
AGGGAGGTGACGAACATGGA+AGG + chr5_2:64693727-64693746 None:intergenic 55.0%
CCCAAATCCAGAGCTGGTGA+AGG - chr5_2:64694106-64694125 Msa0782030:intron 55.0%
!! CCCTTCACCAGCTCTGGATT+TGG + chr5_2:64694110-64694129 None:intergenic 55.0%
GGCCACTGACCTTATCATCC+TGG + chr5_2:64694175-64694194 None:intergenic 55.0%
TAGGCTACAACATGGGGAGG+AGG + chr5_2:64694477-64694496 None:intergenic 55.0%
AGGGAGGTGACGAACATGGA+AGG + chr5_2:64693727-64693746 None:intergenic 55.0%
CCCAAATCCAGAGCTGGTGA+AGG - chr5_2:64694106-64694125 Msa0782030:intron 55.0%
!! CCCTTCACCAGCTCTGGATT+TGG + chr5_2:64694110-64694129 None:intergenic 55.0%
GGCCACTGACCTTATCATCC+TGG + chr5_2:64694175-64694194 None:intergenic 55.0%
TAGGCTACAACATGGGGAGG+AGG + chr5_2:64694477-64694496 None:intergenic 55.0%
CGAAGACCCTTCACCAGCTC+TGG + chr5_2:64694116-64694135 None:intergenic 60.0%
CTTCGTGCTCACACCGATGC+CGG - chr5_2:64694131-64694150 Msa0782030:intron 60.0%
CGAAGACCCTTCACCAGCTC+TGG + chr5_2:64694116-64694135 None:intergenic 60.0%
CTTCGTGCTCACACCGATGC+CGG - chr5_2:64694131-64694150 Msa0782030:intron 60.0%
CGTGCTCACACCGATGCCGG+AGG - chr5_2:64694134-64694153 Msa0782030:intron 70.0%
CGTGCTCACACCGATGCCGG+AGG - chr5_2:64694134-64694153 Msa0782030:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 64693273 64695533 64693273 ID=Msa0782030;Name=Msa0782030
chr5_2 mRNA 64693273 64695533 64693273 ID=Msa0782030-mRNA-1;Parent=Msa0782030;Name=Msa0782030-mRNA-1;_AED=0.17;_eAED=0.17;_QI=72|1|1|1|1|1|4|421|318
chr5_2 exon 64693273 64693981 64693273 ID=Msa0782030-mRNA-1:exon:19458;Parent=Msa0782030-mRNA-1
chr5_2 exon 64694529 64694862 64694529 ID=Msa0782030-mRNA-1:exon:19457;Parent=Msa0782030-mRNA-1
chr5_2 exon 64695016 64695242 64695016 ID=Msa0782030-mRNA-1:exon:19456;Parent=Msa0782030-mRNA-1
chr5_2 exon 64695354 64695533 64695354 ID=Msa0782030-mRNA-1:exon:19455;Parent=Msa0782030-mRNA-1
chr5_2 five_prime_UTR 64695462 64695533 64695462 ID=Msa0782030-mRNA-1:five_prime_utr;Parent=Msa0782030-mRNA-1
chr5_2 CDS 64695354 64695461 64695354 ID=Msa0782030-mRNA-1:cds;Parent=Msa0782030-mRNA-1
chr5_2 CDS 64695016 64695242 64695016 ID=Msa0782030-mRNA-1:cds;Parent=Msa0782030-mRNA-1
chr5_2 CDS 64694529 64694862 64694529 ID=Msa0782030-mRNA-1:cds;Parent=Msa0782030-mRNA-1
chr5_2 CDS 64693694 64693981 64693694 ID=Msa0782030-mRNA-1:cds;Parent=Msa0782030-mRNA-1
chr5_2 three_prime_UTR 64693273 64693693 64693273 ID=Msa0782030-mRNA-1:three_prime_utr;Parent=Msa0782030-mRNA-1
Gene Sequence

>Msa0782030

ATGATGATGAACTTCCCAATTATTAGCTTGGAGAAACTCAATGGTGTTGAGAGAAAAGACACCATGGGGAAAATTAAGGATGCTTGTGAGAATTGGGGATTCTTTGAGCTGGTGAATCATGGTATACCCCATGACCTTATGGACACATTGGAGAGGTTGACCAAAGAGCACTATAGGAAATGCATGGAGCATAGGTTTAAGGAAGTAATATCAAGCAAAGGCTTAGATGCTGTCCAAACTGAAGTCAAAGATATGGATTGGGAAAGCACCTTCCATGTTCGTCACCTCCCTGAATCAAACATTTCAGAGATACCTGATCTCAGTGATGAATACAGGAAAGTGATGAAGGATTTTTCTTTGAGGTTAGAGAAACTAGCAGAAGAGCTTTTGGATGTGTTATGTGAGAATCTTGGACTAGAGAAAGGTTACCTTAAAAAGGCATTTTATGGATCAAGAGGACCAACTTTTGGCACCAAGGTAGCCAACTACCCTCAATGCCCAAATCCAGAGCTGGTGAAGGGTCTTCGTGCTCACACCGATGCCGGAGGAATCATCCTTCTCTTCCAGGATGATAAGGTCAGTGGCCTACAATTGCTCAAAGATGGCCAGTGGATTGATGTTCCCCCAATGCGCCACTCTATTGTTGTCAACCTTGGTGACCAACTTGAGGTAATAACAAATGGCAAGTACAAGAGTGTGGAACATCGTGTGATAGCACAAACTAATGGAACAAGAATGTCCATAGCATCATTCTACAACCCTGGGAGTGATGCTGTAATCTACCCTGCTCCAGAATTGTTGGAAAAACATGCAGAGGAAAAACAGAATGTGTACCCAAAATTTGTGTTTGAAGAGTACATGAAGATCTATGCTGCTTTGAAATTCCATGCTAAGGAACCAAGATTTGAAGCCCTGAAAGAATCAAATGTTAATTTGGGTCCAATTGCAATTGTTTAA

Protein sequence

>Msa0782030

MMMNFPIISLEKLNGVERKDTMGKIKDACENWGFFELVNHGIPHDLMDTLERLTKEHYRKCMEHRFKEVISSKGLDAVQTEVKDMDWESTFHVRHLPESNISEIPDLSDEYRKVMKDFSLRLEKLAEELLDVLCENLGLEKGYLKKAFYGSRGPTFGTKVANYPQCPNPELVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVEHRVIAQTNGTRMSIASFYNPGSDAVIYPAPELLEKHAEEKQNVYPKFVFEEYMKIYAALKFHAKEPRFEALKESNVNLGPIAIV*