Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093050 | XP_013448117.1 | 95.200 | 125 | 0 | 1 | 1 | 119 | 1 | 125 | 6.64e-79 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093050 | A0A072TXB7 | 95.200 | 125 | 0 | 1 | 1 | 119 | 1 | 125 | 3.17e-79 | 238 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0066990 | Msa1093050 | 0.805785 | 1.129049e-49 | -8.615850e-47 |
| Msa0072390 | Msa1093050 | 0.800294 | 1.541909e-48 | -8.615850e-47 |
| Msa0081840 | Msa1093050 | 0.804116 | 2.521215e-49 | -8.615850e-47 |
| Msa0742090 | Msa1093050 | 0.809706 | 1.656889e-50 | -8.615850e-47 |
| Msa0744690 | Msa1093050 | 0.800548 | 1.368732e-48 | -8.615850e-47 |
| Msa0793100 | Msa1093050 | 0.801633 | 8.213605e-49 | -8.615850e-47 |
| Msa0821030 | Msa1093050 | 0.837176 | 6.067456e-57 | -8.615850e-47 |
| Msa0179830 | Msa1093050 | -0.804041 | 2.612594e-49 | -8.615850e-47 |
| Msa0379950 | Msa1093050 | 0.808967 | 2.387379e-50 | -8.615850e-47 |
| Msa1093050 | Msa1143860 | 0.801523 | 8.648033e-49 | -8.615850e-47 |
| Msa1093050 | Msa1149570 | 0.805102 | 1.569515e-49 | -8.615850e-47 |
| Msa1093050 | Msa1154250 | 0.811453 | 6.947264e-51 | -8.615850e-47 |
| Msa1093050 | Msa1184010 | 0.804502 | 2.094588e-49 | -8.615850e-47 |
| Msa1093050 | Msa1225140 | 0.801026 | 1.093102e-48 | -8.615850e-47 |
| Msa1093050 | Msa1228460 | 0.808801 | 2.590663e-50 | -8.615850e-47 |
| Msa1093050 | Msa1243730 | 0.800415 | 1.456626e-48 | -8.615850e-47 |
| Msa1093050 | Msa1349640 | 0.802733 | 4.876753e-49 | -8.615850e-47 |
| Msa1093050 | Msa1376010 | 0.800434 | 1.443763e-48 | -8.615850e-47 |
| Msa1093050 | Msa1393550 | 0.812155 | 4.887819e-51 | -8.615850e-47 |
| Msa1093050 | Msa1405380 | 0.823123 | 1.641009e-53 | -8.615850e-47 |
| Msa1093050 | Msa1426310 | 0.811434 | 7.014072e-51 | -8.615850e-47 |
| Msa1093050 | Msa1436660 | 0.801443 | 8.981963e-49 | -8.615850e-47 |
| Msa1093050 | Msa1456620 | 0.823197 | 1.576813e-53 | -8.615850e-47 |
| Msa0928840 | Msa1093050 | 0.804342 | 2.262466e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093050 | MtrunA17_Chr7g0227351 | 94.444 | 126 | 0 | 1 | 1 | 119 | 1 | 126 | 8.31e-83 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093050 | AT5G40500.2 | 59.200 | 125 | 34 | 4 | 1 | 119 | 1 | 114 | 1.14e-42 | 136 |
| Msa1093050 | AT5G40500.1 | 57.480 | 127 | 42 | 4 | 1 | 119 | 1 | 123 | 1.51e-42 | 136 |
Find 28 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAATCTCAATAACTTTATA+TGG | 0.248815 | 7_3:-12131584 | None:intergenic |
| ACAACGAACGCCAAGAGATT+TGG | 0.306930 | 7_3:-12131615 | None:intergenic |
| CGTATTTCCCTTTGCGGAGC+TGG | 0.320106 | 7_3:-12137079 | None:intergenic |
| CGTGCAGACTATGTTGTTTG+AGG | 0.352901 | 7_3:+12131505 | Msa1093050:intron |
| TCTGATAAGAAAGTGAAAAC+TGG | 0.373882 | 7_3:+12137298 | Msa1093050:three_prime_UTR |
| CAACGAACGCCAAGAGATTT+GGG | 0.383259 | 7_3:-12131614 | None:intergenic |
| TACTTTACTCTCTTGGAGAA+TGG | 0.423250 | 7_3:+12131346 | Msa1093050:exon |
| GGAGAGAGTGTCACAATTGA+AGG | 0.473888 | 7_3:+12137020 | Msa1093050:CDS |
| CTATTTCAGCTGTAACGCTT+CGG | 0.481394 | 7_3:+12137054 | Msa1093050:CDS |
| TTTGTTCGTATTTCCCTTTG+CGG | 0.488368 | 7_3:-12137085 | None:intergenic |
| TTCGGTACCAGCTCCGCAAA+GGG | 0.498628 | 7_3:+12137072 | Msa1093050:CDS |
| TAATCTCAATAACTTTATAT+GGG | 0.517341 | 7_3:-12131583 | None:intergenic |
| AGAGAGTAAAGTAAAATGAA+TGG | 0.519773 | 7_3:-12131336 | None:intergenic |
| GCAACTACATTCAGAACCAA+TGG | 0.536774 | 7_3:+12137241 | Msa1093050:three_prime_UTR |
| ACTCCTCCACCCAAATCTCT+TGG | 0.543768 | 7_3:+12131605 | Msa1093050:CDS |
| ACGCCAAGAGATTTGGGTGG+AGG | 0.555429 | 7_3:-12131608 | None:intergenic |
| CTTCGGTACCAGCTCCGCAA+AGG | 0.565200 | 7_3:+12137071 | Msa1093050:CDS |
| TCTCAATAACTTTATATGGG+TGG | 0.572214 | 7_3:-12131580 | None:intergenic |
| AAGACCTATGTTCATCATGT+TGG | 0.575742 | 7_3:-12131381 | None:intergenic |
| ACTCTCTTGGAGAATGGCAA+TGG | 0.581852 | 7_3:+12131352 | Msa1093050:exon |
| AATACGAACAAAGCGAAAAG+AGG | 0.584810 | 7_3:+12137096 | Msa1093050:CDS |
| TCGTCCAACATGATGAACAT+AGG | 0.595898 | 7_3:+12131377 | Msa1093050:CDS |
| TTCATCATACAAGAAGAAGA+AGG | 0.597762 | 7_3:+12131406 | Msa1093050:CDS |
| AAAATGAATGGCAACCACAA+AGG | 0.646129 | 7_3:-12131324 | None:intergenic |
| TTAAAGCAGAACTTGCAATG+TGG | 0.668299 | 7_3:+12136999 | Msa1093050:intron |
| AGAGACAGAGACAGAGAACG+AGG | 0.670989 | 7_3:+12131545 | Msa1093050:CDS |
| GCAAAAGAAAGACACAAACA+AGG | 0.704048 | 7_3:-12137220 | None:intergenic |
| CGAACGCCAAGAGATTTGGG+TGG | 0.714062 | 7_3:-12131611 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTAAATTATATCAATA+GGG | - | chr7_3:12134028-12134047 | None:intergenic | 10.0% |
| !!! | AAAATTTCCAGATTTTTTTA+TGG | - | chr7_3:12131301-12131320 | None:intergenic | 15.0% |
| !!! | CTATTTAATTAATTGGTTTT+TGG | + | chr7_3:12131451-12131470 | Msa1093050:intron | 15.0% |
| !! | TAATCTCAATAACTTTATAT+GGG | - | chr7_3:12131586-12131605 | None:intergenic | 15.0% |
| !! | TATTGAATAGAAATACAATT+TGG | - | chr7_3:12132390-12132409 | None:intergenic | 15.0% |
| !!! | ATTGTATTTCTATTCAATAT+AGG | + | chr7_3:12132391-12132410 | Msa1093050:intron | 15.0% |
| !! | AAATAAATAACAAAGATCAT+TGG | - | chr7_3:12133852-12133871 | None:intergenic | 15.0% |
| !!! | TCTTTGTTATTTATTTATTC+TGG | + | chr7_3:12133856-12133875 | Msa1093050:intron | 15.0% |
| !!! | GCATTTTAAATTATATCAAT+AGG | - | chr7_3:12134029-12134048 | None:intergenic | 15.0% |
| !! | ATAACATGGTTTATAAAAAA+AGG | - | chr7_3:12134669-12134688 | None:intergenic | 15.0% |
| !!! | TTTTTTATAAACCATGTTAT+AGG | + | chr7_3:12134669-12134688 | Msa1093050:intron | 15.0% |
| !! | AAAAAAAAAAAAAACAGGTT+GGG | - | chr7_3:12134774-12134793 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAAAACAGGT+TGG | - | chr7_3:12134775-12134794 | None:intergenic | 15.0% |
| !!! | AATTAGTTTAATAATGAGTA+CGG | - | chr7_3:12135466-12135485 | None:intergenic | 15.0% |
| !! | AAAAGTTAATACTATACATA+TGG | + | chr7_3:12135510-12135529 | Msa1093050:intron | 15.0% |
| !!! | GAATTTTGTTGTTAAATTTT+AGG | + | chr7_3:12135565-12135584 | Msa1093050:intron | 15.0% |
| !! | TAAATAAAAAATGTTATCCA+TGG | + | chr7_3:12135624-12135643 | Msa1093050:intron | 15.0% |
| !! | AATAAAGTTGTGTATTATAT+AGG | + | chr7_3:12136283-12136302 | Msa1093050:intron | 15.0% |
| !! | GTAATCTCAATAACTTTATA+TGG | - | chr7_3:12131587-12131606 | None:intergenic | 20.0% |
| !!! | TTAAATAAGTTGATCCAAAT+AGG | - | chr7_3:12131678-12131697 | None:intergenic | 20.0% |
| !!! | TATATTTGTTATATGAAGCA+CGG | + | chr7_3:12131703-12131722 | Msa1093050:intron | 20.0% |
| !!! | ACATAATTTAGAGTAATCAT+AGG | - | chr7_3:12131797-12131816 | None:intergenic | 20.0% |
| !! | TTCAACTTCCTATTATATAT+AGG | - | chr7_3:12131890-12131909 | None:intergenic | 20.0% |
| !! | AATCACATCATATATTAGAT+GGG | - | chr7_3:12132095-12132114 | None:intergenic | 20.0% |
| !! | TAATCACATCATATATTAGA+TGG | - | chr7_3:12132096-12132115 | None:intergenic | 20.0% |
| !!! | TAAGGATTTGTTATCAAATT+GGG | - | chr7_3:12132423-12132442 | None:intergenic | 20.0% |
| !!! | TTCTTTTGTCATTTGATTTA+TGG | + | chr7_3:12132803-12132822 | Msa1093050:intron | 20.0% |
| !!! | TTGAATCTTGAATTATTTTG+TGG | + | chr7_3:12132827-12132846 | Msa1093050:intron | 20.0% |
| !!! | TGATCATTTTAGAAACAAAT+TGG | - | chr7_3:12133988-12134007 | None:intergenic | 20.0% |
| !!! | CTTTATCTTTAAAATGAACA+AGG | - | chr7_3:12134088-12134107 | None:intergenic | 20.0% |
| !! | AAATACTAGATAATCTATTC+TGG | - | chr7_3:12134187-12134206 | None:intergenic | 20.0% |
| !!! | AGATTATCTAGTATTTTGAT+AGG | + | chr7_3:12134191-12134210 | Msa1093050:intron | 20.0% |
| !! | TGATTAATGCTGATAAATTA+TGG | + | chr7_3:12134463-12134482 | Msa1093050:intron | 20.0% |
| !! | GATTAATGCTGATAAATTAT+GGG | + | chr7_3:12134464-12134483 | Msa1093050:intron | 20.0% |
| !! | ATTAATGCTGATAAATTATG+GGG | + | chr7_3:12134465-12134484 | Msa1093050:intron | 20.0% |
| !!! | TTTTTATGTTTAACCAGTAT+GGG | - | chr7_3:12134879-12134898 | None:intergenic | 20.0% |
| !!! | TTGATATGAAAAAATGCTTT+TGG | + | chr7_3:12135242-12135261 | Msa1093050:intron | 20.0% |
| !!! | ATTAGTTTAATAATGAGTAC+GGG | - | chr7_3:12135465-12135484 | None:intergenic | 20.0% |
| !! | ATCTAAATTAGGAATGTAAA+TGG | - | chr7_3:12135785-12135804 | None:intergenic | 20.0% |
| !! | AAATTATCTACTAGAGTTTA+AGG | + | chr7_3:12135918-12135937 | Msa1093050:intron | 20.0% |
| !! | ATATTAATGTTATGTTGTGA+TGG | + | chr7_3:12136049-12136068 | Msa1093050:intron | 20.0% |
| !!! | TTTTATAAGTTTGAGTAGTA+TGG | + | chr7_3:12136439-12136458 | Msa1093050:intron | 20.0% |
| !! | ATTACGAAAAAAACAAAGAA+CGG | - | chr7_3:12136628-12136647 | None:intergenic | 20.0% |
| !! | AAATATTTCTTTACTGAACA+AGG | - | chr7_3:12136802-12136821 | None:intergenic | 20.0% |
| !! | ATTCATTATAATTGTGAGAA+TGG | + | chr7_3:12136909-12136928 | Msa1093050:intron | 20.0% |
| !! | AGAACAAAAGAAAAAAGAAA+TGG | - | chr7_3:12136979-12136998 | None:intergenic | 20.0% |
| !!! | TTTCCAGATTTTTTTATGGT+GGG | - | chr7_3:12131297-12131316 | None:intergenic | 25.0% |
| !!! | ATTTCCAGATTTTTTTATGG+TGG | - | chr7_3:12131298-12131317 | None:intergenic | 25.0% |
| ! | AGAGAGTAAAGTAAAATGAA+TGG | - | chr7_3:12131339-12131358 | None:intergenic | 25.0% |
| !! | TTCATTTTACTTTACTCTCT+TGG | + | chr7_3:12131339-12131358 | Msa1093050:five_prime_UTR | 25.0% |
| ! | ACAATCTACAAACAATTGAT+TGG | + | chr7_3:12132115-12132134 | Msa1093050:intron | 25.0% |
| ! | TGTATGGAGAAAATTTAGTT+GGG | + | chr7_3:12132190-12132209 | Msa1093050:intron | 25.0% |
| !! | AGAGATTAGTTATTGCTAAA+CGG | + | chr7_3:12132249-12132268 | Msa1093050:intron | 25.0% |
| ! | TGCAATCATATTTATGTTAC+AGG | - | chr7_3:12132291-12132310 | None:intergenic | 25.0% |
| !!! | CTAAGGATTTGTTATCAAAT+TGG | - | chr7_3:12132424-12132443 | None:intergenic | 25.0% |
| !! | AATGAAATTCAGGTTCAAAA+TGG | - | chr7_3:12132454-12132473 | None:intergenic | 25.0% |
| ! | CAAGATTCAAAATGAAATTC+AGG | - | chr7_3:12132464-12132483 | None:intergenic | 25.0% |
| ! | ATCATTGCTCTTATAAGAAT+GGG | - | chr7_3:12132532-12132551 | None:intergenic | 25.0% |
| ! | TATCATTGCTCTTATAAGAA+TGG | - | chr7_3:12132533-12132552 | None:intergenic | 25.0% |
| ! | AATTCCTTCATAAAACCATA+CGG | - | chr7_3:12132590-12132609 | None:intergenic | 25.0% |
| !!! | TGGTTTTATGAAGGAATTAT+AGG | + | chr7_3:12132592-12132611 | Msa1093050:intron | 25.0% |
| ! | AGGTAGTAATTTATAAGAAG+AGG | - | chr7_3:12132724-12132743 | None:intergenic | 25.0% |
| ! | TTGTCAATTGTGAATAATAG+TGG | - | chr7_3:12132990-12133009 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr7_3:12133170-12133189 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr7_3:12133187-12133206 | Msa1093050:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr7_3:12133312-12133331 | None:intergenic | 25.0% |
| ! | TTACACGGTTTAAATATCTT+GGG | - | chr7_3:12133650-12133669 | None:intergenic | 25.0% |
| ! | ATATTTAAACCGTGTAACTT+GGG | + | chr7_3:12133653-12133672 | Msa1093050:intron | 25.0% |
| ! | TGGAATGTAACTTCAATAAA+AGG | - | chr7_3:12133725-12133744 | None:intergenic | 25.0% |
| ! | ATCAAGATGAAATTGTGAAT+CGG | - | chr7_3:12133790-12133809 | None:intergenic | 25.0% |
| ! | AATAACAAAGATCATTGGTA+TGG | - | chr7_3:12133847-12133866 | None:intergenic | 25.0% |
| !!! | TCATTTTAGAAACAAATTGG+CGG | - | chr7_3:12133985-12134004 | None:intergenic | 25.0% |
| !!! | AAAGATAAAGTTCACTTTTG+AGG | + | chr7_3:12134098-12134117 | Msa1093050:intron | 25.0% |
| ! | ACCAGATCTTATAATATTCA+GGG | - | chr7_3:12134521-12134540 | None:intergenic | 25.0% |
| ! | AACCAGATCTTATAATATTC+AGG | - | chr7_3:12134522-12134541 | None:intergenic | 25.0% |
| !! | TATACTAAAAACAGAAGTGT+CGG | - | chr7_3:12134623-12134642 | None:intergenic | 25.0% |
| ! | ACATGGTTTATAAAAAAAGG+AGG | - | chr7_3:12134666-12134685 | None:intergenic | 25.0% |
| !! | GTTTTTATGTTTAACCAGTA+TGG | - | chr7_3:12134880-12134899 | None:intergenic | 25.0% |
| ! | AGAGTTATTCATGTATTAAG+AGG | - | chr7_3:12134905-12134924 | None:intergenic | 25.0% |
| !! | GACTTGTTTCAATAATATGT+TGG | - | chr7_3:12134993-12135012 | None:intergenic | 25.0% |
| !! | ACATTATTACTTGAAAGTAC+TGG | - | chr7_3:12135015-12135034 | None:intergenic | 25.0% |
| !!! | AAAAAATGCTTTTGGTTCAA+TGG | + | chr7_3:12135250-12135269 | Msa1093050:intron | 25.0% |
| ! | CATATAATTAAGCACTTAGA+GGG | + | chr7_3:12135321-12135340 | Msa1093050:intron | 25.0% |
| ! | ATATAATTAAGCACTTAGAG+GGG | + | chr7_3:12135322-12135341 | Msa1093050:intron | 25.0% |
| !! | ATAAATTTTGTCACAGACAA+TGG | + | chr7_3:12135386-12135405 | Msa1093050:intron | 25.0% |
| !! | TAAATTTTGTCACAGACAAT+GGG | + | chr7_3:12135387-12135406 | Msa1093050:intron | 25.0% |
| !!! | ACAGATTTTTAGATATCCAT+AGG | - | chr7_3:12135663-12135682 | None:intergenic | 25.0% |
| ! | TATGGATATCTAAAAATCTG+TGG | + | chr7_3:12135662-12135681 | Msa1093050:intron | 25.0% |
| ! | GATATCATATTTATCCAACT+GGG | + | chr7_3:12135722-12135741 | Msa1093050:intron | 25.0% |
| ! | TGTCTAATACATTACTAGAA+TGG | + | chr7_3:12135885-12135904 | Msa1093050:intron | 25.0% |
| ! | GAAAAAAAAAGCTACTGTAA+AGG | + | chr7_3:12135984-12136003 | Msa1093050:intron | 25.0% |
| !! | TCATGGTTTTTAAACTTCAA+TGG | - | chr7_3:12136082-12136101 | None:intergenic | 25.0% |
| ! | TTAAAAACCATGATTCTGTT+TGG | + | chr7_3:12136089-12136108 | Msa1093050:intron | 25.0% |
| !! | TTTACATCATATTTTCATCC+AGG | - | chr7_3:12136206-12136225 | None:intergenic | 25.0% |
| ! | GGATGAAAATATGATGTAAA+AGG | + | chr7_3:12136206-12136225 | Msa1093050:intron | 25.0% |
| ! | TTTATTCATCCATTATGCAA+AGG | - | chr7_3:12136269-12136288 | None:intergenic | 25.0% |
| !! | ATCCTACATTATGTGTTTTA+AGG | - | chr7_3:12136397-12136416 | None:intergenic | 25.0% |
| !! | AAATTCTAAAGAAGCAATCA+TGG | - | chr7_3:12136471-12136490 | None:intergenic | 25.0% |
| !!! | GTTCTTTGTTTTTTTCGTAA+TGG | + | chr7_3:12136627-12136646 | Msa1093050:intron | 25.0% |
| !!! | TTTTGTTTTCAACACCATAA+AGG | - | chr7_3:12136744-12136763 | None:intergenic | 25.0% |
| !! | TGTTGAAAACAAAACAGTTT+TGG | + | chr7_3:12136750-12136769 | Msa1093050:intron | 25.0% |
| !!! | ATCCAACACATCTTTTTTTT+AGG | + | chr7_3:12136878-12136897 | Msa1093050:intron | 25.0% |
| !!! | TCCAACACATCTTTTTTTTA+GGG | + | chr7_3:12136879-12136898 | Msa1093050:intron | 25.0% |
| TTCATCATACAAGAAGAAGA+AGG | + | chr7_3:12131406-12131425 | Msa1093050:CDS | 30.0% | |
| TCTCAATAACTTTATATGGG+TGG | - | chr7_3:12131583-12131602 | None:intergenic | 30.0% | |
| AAAAATGAATGGAAGCTTAC+GGG | - | chr7_3:12131647-12131666 | None:intergenic | 30.0% | |
| GAAAAATGAATGGAAGCTTA+CGG | - | chr7_3:12131648-12131667 | None:intergenic | 30.0% | |
| ! | ATTTTTCACCACTACCTATT+TGG | + | chr7_3:12131661-12131680 | Msa1093050:intron | 30.0% |
| TCTCAGGTCCTATATATAAT+AGG | + | chr7_3:12131879-12131898 | Msa1093050:intron | 30.0% | |
| GTAATCTACCAACAATTGAT+TGG | + | chr7_3:12131979-12131998 | Msa1093050:intron | 30.0% | |
| AAATCTCACCAATCAATTGT+TGG | - | chr7_3:12131990-12132009 | None:intergenic | 30.0% | |
| TGTATGGAGAAAATTCAGTT+GGG | + | chr7_3:12132062-12132081 | Msa1093050:intron | 30.0% | |
| ATCTACAAACAATTGATTGG+TGG | + | chr7_3:12132118-12132137 | Msa1093050:intron | 30.0% | |
| TCTACAAACAATTGATTGGT+GGG | + | chr7_3:12132119-12132138 | Msa1093050:intron | 30.0% | |
| GTGTATGGAGAAAATTTAGT+TGG | + | chr7_3:12132189-12132208 | Msa1093050:intron | 30.0% | |
| GTATGGAGAAAATTTAGTTG+GGG | + | chr7_3:12132191-12132210 | Msa1093050:intron | 30.0% | |
| ATCTCTATCAAAGAACATGT+TGG | - | chr7_3:12132235-12132254 | None:intergenic | 30.0% | |
| AGCTAATGACACAATAGTTA+GGG | - | chr7_3:12132328-12132347 | None:intergenic | 30.0% | |
| TAGCTAATGACACAATAGTT+AGG | - | chr7_3:12132329-12132348 | None:intergenic | 30.0% | |
| TTCAAAATGGATACACACTA+AGG | - | chr7_3:12132441-12132460 | None:intergenic | 30.0% | |
| AGAATTCAGCATAATGAAAC+AGG | - | chr7_3:12132507-12132526 | None:intergenic | 30.0% | |
| ! | AAAACCATACGGTGTTAAAT+TGG | - | chr7_3:12132579-12132598 | None:intergenic | 30.0% |
| ACTGTTAACCGTATAAAAAG+AGG | + | chr7_3:12132665-12132684 | Msa1093050:intron | 30.0% | |
| ! | TGTTCACACCTCTTTTTATA+CGG | - | chr7_3:12132676-12132695 | None:intergenic | 30.0% |
| AAAGTTGACAATAGAAAGTG+GGG | - | chr7_3:12132767-12132786 | None:intergenic | 30.0% | |
| CAAAGTTGACAATAGAAAGT+GGG | - | chr7_3:12132768-12132787 | None:intergenic | 30.0% | |
| ACAAAGTTGACAATAGAAAG+TGG | - | chr7_3:12132769-12132788 | None:intergenic | 30.0% | |
| CAACACTAATGTCATTGATA+TGG | + | chr7_3:12133007-12133026 | Msa1093050:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | - | chr7_3:12133123-12133142 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr7_3:12133126-12133145 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | + | chr7_3:12133130-12133149 | Msa1093050:intron | 30.0% | |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr7_3:12133165-12133184 | Msa1093050:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr7_3:12133316-12133335 | Msa1093050:intron | 30.0% |
| GTTACACGGTTTAAATATCT+TGG | - | chr7_3:12133651-12133670 | None:intergenic | 30.0% | |
| GATATTTAAACCGTGTAACT+TGG | + | chr7_3:12133652-12133671 | Msa1093050:intron | 30.0% | |
| TATTTAAACCGTGTAACTTG+GGG | + | chr7_3:12133654-12133673 | Msa1093050:intron | 30.0% | |
| ACTTCAATAAAAGGAGAAGT+GGG | - | chr7_3:12133716-12133735 | None:intergenic | 30.0% | |
| AACTTCAATAAAAGGAGAAG+TGG | - | chr7_3:12133717-12133736 | None:intergenic | 30.0% | |
| TAGATTTACTCATCACGTTA+GGG | - | chr7_3:12133950-12133969 | None:intergenic | 30.0% | |
| TTAGATTTACTCATCACGTT+AGG | - | chr7_3:12133951-12133970 | None:intergenic | 30.0% | |
| ACCCTGAATATTATAAGATC+TGG | + | chr7_3:12134517-12134536 | Msa1093050:intron | 30.0% | |
| !! | ATACTAAAAACAGAAGTGTC+GGG | - | chr7_3:12134622-12134641 | None:intergenic | 30.0% |
| GATACTTCTTACCTATAACA+TGG | - | chr7_3:12134683-12134702 | None:intergenic | 30.0% | |
| ! | AAAAAAAAAACAGGTTGGGA+GGG | - | chr7_3:12134770-12134789 | None:intergenic | 30.0% |
| ! | AAAAAAAAAAACAGGTTGGG+AGG | - | chr7_3:12134771-12134790 | None:intergenic | 30.0% |
| AAGTATTAAAATGCAACCAG+TGG | + | chr7_3:12134936-12134955 | Msa1093050:intron | 30.0% | |
| ACCTTGAATGTTTCCTATAA+AGG | + | chr7_3:12134962-12134981 | Msa1093050:intron | 30.0% | |
| GTTTCAATAATATGTTGGCA+AGG | - | chr7_3:12134988-12135007 | None:intergenic | 30.0% | |
| ! | TTCCTTGAAAAGAATGCTTT+TGG | + | chr7_3:12135053-12135072 | Msa1093050:intron | 30.0% |
| !!! | AACCAAAAGCATTCTTTTCA+AGG | - | chr7_3:12135058-12135077 | None:intergenic | 30.0% |
| !!! | AAAGAATGCTTTTGGTTCAA+TGG | + | chr7_3:12135061-12135080 | Msa1093050:intron | 30.0% |
| ! | CTGACTTTTATGAAGTTGTA+CGG | - | chr7_3:12135176-12135195 | None:intergenic | 30.0% |
| GTACAACTTCATAAAAGTCA+GGG | + | chr7_3:12135175-12135194 | Msa1093050:intron | 30.0% | |
| ATCAAATGCACAAATTGCTT+TGG | - | chr7_3:12135227-12135246 | None:intergenic | 30.0% | |
| CCTCTAAGTGCTTAATTATA+TGG | - | chr7_3:12135323-12135342 | None:intergenic | 30.0% | |
| CCATATAATTAAGCACTTAG+AGG | + | chr7_3:12135320-12135339 | Msa1093050:intron | 30.0% | |
| GACAAAATTTATCCGTGATT+GGG | - | chr7_3:12135378-12135397 | None:intergenic | 30.0% | |
| TGACAAAATTTATCCGTGAT+TGG | - | chr7_3:12135379-12135398 | None:intergenic | 30.0% | |
| TAGGTATACACAAATTTCCA+TGG | - | chr7_3:12135644-12135663 | None:intergenic | 30.0% | |
| TGGAAATTTGTGTATACCTA+TGG | + | chr7_3:12135644-12135663 | Msa1093050:intron | 30.0% | |
| GGATATCATATTTATCCAAC+TGG | + | chr7_3:12135721-12135740 | Msa1093050:intron | 30.0% | |
| TATCATACTATCTGTGTCTA+CGG | + | chr7_3:12135755-12135774 | Msa1093050:intron | 30.0% | |
| ATCTCTTGCACATCTAAATT+AGG | - | chr7_3:12135796-12135815 | None:intergenic | 30.0% | |
| ! | ATACCTCCTTTTCAACTATA+AGG | - | chr7_3:12135827-12135846 | None:intergenic | 30.0% |
| ! | ACTAGAGTTTAAGGTAGTTA+TGG | + | chr7_3:12135927-12135946 | Msa1093050:intron | 30.0% |
| !!! | CAGTAGCTTTTTTTTTCACA+AGG | - | chr7_3:12135981-12136000 | None:intergenic | 30.0% |
| !!! | TGCAAATATTGACTTGCTTT+TGG | + | chr7_3:12136015-12136034 | Msa1093050:intron | 30.0% |
| AAGATGCAATCATTTCTAAG+AGG | + | chr7_3:12136332-12136351 | Msa1093050:intron | 30.0% | |
| GACCTTAAAACACATAATGT+AGG | + | chr7_3:12136392-12136411 | Msa1093050:intron | 30.0% | |
| AAAAAAACAAAGAACGGACA+CGG | - | chr7_3:12136622-12136641 | None:intergenic | 30.0% | |
| TCATTATAAGTGAATGCAGA+TGG | + | chr7_3:12136657-12136676 | Msa1093050:intron | 30.0% | |
| CATTATAAGTGAATGCAGAT+GGG | + | chr7_3:12136658-12136677 | Msa1093050:intron | 30.0% | |
| CTTCAATTTCTCATCTCATA+TGG | - | chr7_3:12136685-12136704 | None:intergenic | 30.0% | |
| AGAAATTGAAGCAAGTCATT+TGG | + | chr7_3:12136694-12136713 | Msa1093050:intron | 30.0% | |
| GTATGCATAATTGAATCATG+AGG | - | chr7_3:12136853-12136872 | None:intergenic | 30.0% | |
| ACCCTAAAAAAAAGATGTGT+TGG | - | chr7_3:12136883-12136902 | None:intergenic | 30.0% | |
| !! | AAGCTTTTCTAATTTGCCAT+TGG | - | chr7_3:12137260-12137279 | None:intergenic | 30.0% |
| TCTGATAAGAAAGTGAAAAC+TGG | + | chr7_3:12137298-12137317 | Msa1093050:three_prime_UTR | 30.0% | |
| TGAAAAAAATTGAGACGCTG+TGG | + | chr7_3:12131267-12131286 | Msa1093050:five_prime_UTR | 35.0% | |
| TGTCCCACCATAAAAAAATC+TGG | + | chr7_3:12131291-12131310 | Msa1093050:five_prime_UTR | 35.0% | |
| AAAATGAATGGCAACCACAA+AGG | - | chr7_3:12131327-12131346 | None:intergenic | 35.0% | |
| TACTTTACTCTCTTGGAGAA+TGG | + | chr7_3:12131346-12131365 | Msa1093050:exon | 35.0% | |
| AAGACCTATGTTCATCATGT+TGG | - | chr7_3:12131384-12131403 | None:intergenic | 35.0% | |
| AAAATGAATGGAAGCTTACG+GGG | - | chr7_3:12131646-12131665 | None:intergenic | 35.0% | |
| ! | AGGTAGTGGTGAAAAATGAA+TGG | - | chr7_3:12131658-12131677 | None:intergenic | 35.0% |
| ! | AAGTTGATCCAAATAGGTAG+TGG | - | chr7_3:12131672-12131691 | None:intergenic | 35.0% |
| ATGAAGAACAGACACAAACA+CGG | - | chr7_3:12131850-12131869 | None:intergenic | 35.0% | |
| !! | TACATCAACTTGTTGAACCA+GGG | + | chr7_3:12131912-12131931 | Msa1093050:intron | 35.0% |
| TAAGAAGAATATATGACCCC+TGG | - | chr7_3:12131932-12131951 | None:intergenic | 35.0% | |
| GGGGTCATATATTCTTCTTA+TGG | + | chr7_3:12131932-12131951 | Msa1093050:intron | 35.0% | |
| GTGTATGGAGAAAATTCAGT+TGG | + | chr7_3:12132061-12132080 | Msa1093050:intron | 35.0% | |
| GTATGGAGAAAATTCAGTTG+GGG | + | chr7_3:12132063-12132082 | Msa1093050:intron | 35.0% | |
| AACAATTGATTGGTGGGATT+TGG | + | chr7_3:12132125-12132144 | Msa1093050:intron | 35.0% | |
| ! | GATTAGTTATTGCTAAACGG+CGG | + | chr7_3:12132252-12132271 | Msa1093050:intron | 35.0% |
| ATAGTTAGGGATAACACTTG+AGG | - | chr7_3:12132315-12132334 | None:intergenic | 35.0% | |
| TTCAGCATAATGAAACAGGT+GGG | - | chr7_3:12132503-12132522 | None:intergenic | 35.0% | |
| ATTCAGCATAATGAAACAGG+TGG | - | chr7_3:12132504-12132523 | None:intergenic | 35.0% | |
| ACAACCAATTTAACACCGTA+TGG | + | chr7_3:12132572-12132591 | Msa1093050:intron | 35.0% | |
| !!! | AACACCGTATGGTTTTATGA+AGG | + | chr7_3:12132583-12132602 | Msa1093050:intron | 35.0% |
| CTACAATGATTAGGTGGTTT+AGG | - | chr7_3:12132744-12132763 | None:intergenic | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr7_3:12133146-12133165 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr7_3:12133158-12133177 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr7_3:12133242-12133261 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr7_3:12133245-12133264 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr7_3:12133246-12133265 | Msa1093050:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr7_3:12133298-12133317 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr7_3:12133303-12133322 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr7_3:12133323-12133342 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr7_3:12133377-12133396 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr7_3:12133512-12133531 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr7_3:12133516-12133535 | Msa1093050:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr7_3:12133525-12133544 | None:intergenic | 35.0% |
| TACATCATCGTATTCAAGCT+GGG | - | chr7_3:12133590-12133609 | None:intergenic | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | + | chr7_3:12133623-12133642 | Msa1093050:intron | 35.0% |
| ATATCATACCCCAAGTTACA+CGG | - | chr7_3:12133665-12133684 | None:intergenic | 35.0% | |
| AGATTTACTCATCACGTTAG+GGG | - | chr7_3:12133949-12133968 | None:intergenic | 35.0% | |
| ATCTTAACACACAGCTCTAT+AGG | + | chr7_3:12134055-12134074 | Msa1093050:intron | 35.0% | |
| TCAGTCAGAAACTTCTAACA+TGG | - | chr7_3:12134227-12134246 | None:intergenic | 35.0% | |
| TTAGAAGTTTCTGACTGATC+TGG | + | chr7_3:12134229-12134248 | Msa1093050:intron | 35.0% | |
| ! | ATTTTACTTCCCTTCACTAG+CGG | - | chr7_3:12134294-12134313 | None:intergenic | 35.0% |
| TTCTGTTACATACGCAACAA+TGG | + | chr7_3:12134324-12134343 | Msa1093050:intron | 35.0% | |
| ! | CTCTCTAGGAATACATATCT+AGG | + | chr7_3:12134352-12134371 | Msa1093050:intron | 35.0% |
| GGAGATTGATCACTCTTAAA+CGG | - | chr7_3:12134711-12134730 | None:intergenic | 35.0% | |
| TAAGAGTGATCAATCTCCAA+TGG | + | chr7_3:12134713-12134732 | Msa1093050:intron | 35.0% | |
| ACTCATTCCAATTGCCTAAT+AGG | - | chr7_3:12134743-12134762 | None:intergenic | 35.0% | |
| ! | AAAAAAAAACAGGTTGGGAG+GGG | - | chr7_3:12134769-12134788 | None:intergenic | 35.0% |
| ! | TTTTTCCATATGCAAGAGCT+AGG | + | chr7_3:12134796-12134815 | Msa1093050:intron | 35.0% |
| ATGTTTAACCAGTATGGGTT+TGG | - | chr7_3:12134874-12134893 | None:intergenic | 35.0% | |
| GCCTTTATAGGAAACATTCA+AGG | - | chr7_3:12134966-12134985 | None:intergenic | 35.0% | |
| !!! | TTTGCACCAGTGTTACTTTT+TGG | + | chr7_3:12135149-12135168 | Msa1093050:intron | 35.0% |
| CGTACAACTTCATAAAAGTC+AGG | + | chr7_3:12135174-12135193 | Msa1093050:intron | 35.0% | |
| CTTAGAGGGGATTTAGATTA+TGG | + | chr7_3:12135335-12135354 | Msa1093050:intron | 35.0% | |
| AAAAAATCCGTACCCAATCA+CGG | + | chr7_3:12135363-12135382 | Msa1093050:intron | 35.0% | |
| AATTTATCCGTGATTGGGTA+CGG | - | chr7_3:12135373-12135392 | None:intergenic | 35.0% | |
| ATACGGATATGGATAAGACA+CGG | + | chr7_3:12135700-12135719 | Msa1093050:intron | 35.0% | |
| ATCATATTTATCCAACTGGG+CGG | + | chr7_3:12135725-12135744 | Msa1093050:intron | 35.0% | |
| TGTGCACCTTATAGTTGAAA+AGG | + | chr7_3:12135818-12135837 | Msa1093050:intron | 35.0% | |
| AAAGAAGCCAAACAGAATCA+TGG | - | chr7_3:12136099-12136118 | None:intergenic | 35.0% | |
| CCAATCTACTAAGCAGAAAA+GGG | - | chr7_3:12136128-12136147 | None:intergenic | 35.0% | |
| TCCAATCTACTAAGCAGAAA+AGG | - | chr7_3:12136129-12136148 | None:intergenic | 35.0% | |
| TTGTCTTCAATTATCTGCCT+AGG | - | chr7_3:12136361-12136380 | None:intergenic | 35.0% | |
| !!! | TGTTTTAAGGTCCAACACAT+GGG | - | chr7_3:12136384-12136403 | None:intergenic | 35.0% |
| ACACCTTTGATCGTAAGTAT+CGG | - | chr7_3:12136512-12136531 | None:intergenic | 35.0% | |
| ! | TTTTCAACACCATAAAGGCA+AGG | - | chr7_3:12136739-12136758 | None:intergenic | 35.0% |
| TTAAAGCAGAACTTGCAATG+TGG | + | chr7_3:12136999-12137018 | Msa1093050:intron | 35.0% | |
| TTTGTTCGTATTTCCCTTTG+CGG | - | chr7_3:12137088-12137107 | None:intergenic | 35.0% | |
| AATACGAACAAAGCGAAAAG+AGG | + | chr7_3:12137096-12137115 | Msa1093050:CDS | 35.0% | |
| GCAAAAGAAAGACACAAACA+AGG | - | chr7_3:12137223-12137242 | None:intergenic | 35.0% | |
| ! | CTGGAAATTTTCAGCCTTTG+TGG | + | chr7_3:12131310-12131329 | Msa1093050:five_prime_UTR | 40.0% |
| TCGTCCAACATGATGAACAT+AGG | + | chr7_3:12131377-12131396 | Msa1093050:CDS | 40.0% | |
| AAATGAATGGAAGCTTACGG+GGG | - | chr7_3:12131645-12131664 | None:intergenic | 40.0% | |
| ! | AGTAATCATAGGTGTCGTGT+GGG | - | chr7_3:12131786-12131805 | None:intergenic | 40.0% |
| !! | CTACATCAACTTGTTGAACC+AGG | + | chr7_3:12131911-12131930 | Msa1093050:intron | 40.0% |
| !! | ACATCAACTTGTTGAACCAG+GGG | + | chr7_3:12131913-12131932 | Msa1093050:intron | 40.0% |
| ATTTGTACCCCTTAACCAAG+TGG | + | chr7_3:12132006-12132025 | Msa1093050:intron | 40.0% | |
| TTTGTACCCCTTAACCAAGT+GGG | + | chr7_3:12132007-12132026 | Msa1093050:intron | 40.0% | |
| GATTTGGCCCTTTAATCAAG+TGG | + | chr7_3:12132141-12132160 | Msa1093050:intron | 40.0% | |
| GCCCTTTAATCAAGTGGATA+GGG | + | chr7_3:12132147-12132166 | Msa1093050:intron | 40.0% | |
| CCCCTATCCACTTGATTAAA+GGG | - | chr7_3:12132151-12132170 | None:intergenic | 40.0% | |
| CCCTTTAATCAAGTGGATAG+GGG | + | chr7_3:12132148-12132167 | Msa1093050:intron | 40.0% | |
| ACCCCTATCCACTTGATTAA+AGG | - | chr7_3:12132152-12132171 | None:intergenic | 40.0% | |
| GATCTCTGACTTTGTGTGTA+TGG | + | chr7_3:12132174-12132193 | Msa1093050:intron | 40.0% | |
| AAAGTGGGGCTACAATGATT+AGG | - | chr7_3:12132753-12132772 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr7_3:12133217-12133236 | None:intergenic | 40.0% | |
| ATCATTAGAGAGAGAGAGTG+GGG | - | chr7_3:12133348-12133367 | None:intergenic | 40.0% | |
| CATCATTAGAGAGAGAGAGT+GGG | - | chr7_3:12133349-12133368 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGAG+TGG | - | chr7_3:12133350-12133369 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr7_3:12133383-12133402 | None:intergenic | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | - | chr7_3:12133591-12133610 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | - | chr7_3:12133630-12133649 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | + | chr7_3:12133686-12133705 | Msa1093050:intron | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | - | chr7_3:12133693-12133712 | None:intergenic | 40.0% | |
| ! | CCATTTATTCCGTCTTGTTG+CGG | + | chr7_3:12133742-12133761 | Msa1093050:intron | 40.0% |
| GTTCAAATTCCGCAACAAGA+CGG | - | chr7_3:12133754-12133773 | None:intergenic | 40.0% | |
| CTGGACAGTACTAATGTTCA+AGG | + | chr7_3:12134248-12134267 | Msa1093050:intron | 40.0% | |
| ! | TTTTACTTCCCTTCACTAGC+GGG | - | chr7_3:12134293-12134312 | None:intergenic | 40.0% |
| CAACAATGGAATCTCTCTCT+AGG | + | chr7_3:12134338-12134357 | Msa1093050:intron | 40.0% | |
| GATTGATCACTCTTAAACGG+CGG | - | chr7_3:12134708-12134727 | None:intergenic | 40.0% | |
| TCTCCAATGGTGAACCTATT+AGG | + | chr7_3:12134726-12134745 | Msa1093050:intron | 40.0% | |
| TTGCCTAATAGGTTCACCAT+TGG | - | chr7_3:12134732-12134751 | None:intergenic | 40.0% | |
| TGGTGAACCTATTAGGCAAT+TGG | + | chr7_3:12134733-12134752 | Msa1093050:intron | 40.0% | |
| ! | TGATTCCTAGCTCTTGCATA+TGG | - | chr7_3:12134804-12134823 | None:intergenic | 40.0% |
| AAACATTCAAGGTTGTCCAC+TGG | - | chr7_3:12134955-12134974 | None:intergenic | 40.0% | |
| TATGTTGGCAAGGCCTTTAT+AGG | - | chr7_3:12134978-12134997 | None:intergenic | 40.0% | |
| TACGGTCCAAAAAGTAACAC+TGG | - | chr7_3:12135158-12135177 | None:intergenic | 40.0% | |
| TGGACTTGTATAAAGCTCTC+TGG | + | chr7_3:12135270-12135289 | Msa1093050:intron | 40.0% | |
| ! | ATTTTGTCACAGACAATGGG+CGG | + | chr7_3:12135390-12135409 | Msa1093050:intron | 40.0% |
| GATACCTTATGATACGGATG+CGG | + | chr7_3:12135412-12135431 | Msa1093050:intron | 40.0% | |
| AAATCCGCATCCGTATCATA+AGG | - | chr7_3:12135419-12135438 | None:intergenic | 40.0% | |
| TGATACGGATGCGGATTTAA+TGG | + | chr7_3:12135421-12135440 | Msa1093050:intron | 40.0% | |
| ATAATGAGTACGGGTATCTG+CGG | - | chr7_3:12135456-12135475 | None:intergenic | 40.0% | |
| GCACCTTATAGTTGAAAAGG+AGG | + | chr7_3:12135821-12135840 | Msa1093050:intron | 40.0% | |
| ! | CCCTTTTCTGCTTAGTAGAT+TGG | + | chr7_3:12136125-12136144 | Msa1093050:intron | 40.0% |
| ! | AGATTGGATTTTCCTTCTCG+TGG | + | chr7_3:12136141-12136160 | Msa1093050:intron | 40.0% |
| ! | GATTGGATTTTCCTTCTCGT+GGG | + | chr7_3:12136142-12136161 | Msa1093050:intron | 40.0% |
| AAGATTGAGTGTCAGTGGTT+TGG | + | chr7_3:12136165-12136184 | Msa1093050:intron | 40.0% | |
| !! | TCATTTCTAAGAGGCATCCT+AGG | + | chr7_3:12136341-12136360 | Msa1093050:intron | 40.0% |
| ATTGAAGACAACCCATGTGT+TGG | + | chr7_3:12136370-12136389 | Msa1093050:intron | 40.0% | |
| !!! | GTGTTTTAAGGTCCAACACA+TGG | - | chr7_3:12136385-12136404 | None:intergenic | 40.0% |
| CTCACGTGTCAATATAGTGT+CGG | - | chr7_3:12136542-12136561 | None:intergenic | 40.0% | |
| GGCAAGGAACAAACACAATT+AGG | - | chr7_3:12136723-12136742 | None:intergenic | 40.0% | |
| GTGTTTGTTCCTTGCCTTTA+TGG | + | chr7_3:12136727-12136746 | Msa1093050:intron | 40.0% | |
| CTATTTCAGCTGTAACGCTT+CGG | + | chr7_3:12137054-12137073 | Msa1093050:CDS | 40.0% | |
| GCAACTACATTCAGAACCAA+TGG | + | chr7_3:12137241-12137260 | Msa1093050:three_prime_UTR | 40.0% | |
| ACTCTCTTGGAGAATGGCAA+TGG | + | chr7_3:12131352-12131371 | Msa1093050:exon | 45.0% | |
| ! | CGTGCAGACTATGTTGTTTG+AGG | + | chr7_3:12131505-12131524 | Msa1093050:intron | 45.0% |
| CAACGAACGCCAAGAGATTT+GGG | - | chr7_3:12131617-12131636 | None:intergenic | 45.0% | |
| ACAACGAACGCCAAGAGATT+TGG | - | chr7_3:12131618-12131637 | None:intergenic | 45.0% | |
| AATGAATGGAAGCTTACGGG+GGG | - | chr7_3:12131644-12131663 | None:intergenic | 45.0% | |
| CACTGGGACACACTAATATG+AGG | - | chr7_3:12131734-12131753 | None:intergenic | 45.0% | |
| ! | GAGTAATCATAGGTGTCGTG+TGG | - | chr7_3:12131787-12131806 | None:intergenic | 45.0% |
| TCTTCATTCGCTACTCTCTC+AGG | + | chr7_3:12131863-12131882 | Msa1093050:intron | 45.0% | |
| TGATCTCGGACTCTTGTGTA+TGG | + | chr7_3:12132046-12132065 | Msa1093050:intron | 45.0% | |
| GGCCCTTTAATCAAGTGGAT+AGG | + | chr7_3:12132146-12132165 | Msa1093050:intron | 45.0% | |
| TAGTTATTGCTAAACGGCGG+TGG | + | chr7_3:12132255-12132274 | Msa1093050:intron | 45.0% | |
| TCCGCAACAATGCTATAGTG+CGG | - | chr7_3:12133039-12133058 | None:intergenic | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr7_3:12133223-12133242 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr7_3:12133233-12133252 | None:intergenic | 45.0% | |
| TCATTAGAGAGAGAGAGTGG+GGG | - | chr7_3:12133347-12133366 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr7_3:12133430-12133449 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr7_3:12133433-12133452 | Msa1093050:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr7_3:12133469-12133488 | None:intergenic | 45.0% |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr7_3:12133470-12133489 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr7_3:12133474-12133493 | Msa1093050:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr7_3:12133478-12133497 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr7_3:12133545-12133564 | Msa1093050:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr7_3:12133564-12133583 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr7_3:12133578-12133597 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr7_3:12133587-12133606 | None:intergenic | 45.0% | |
| CCGCAACAAGACGGAATAAA+TGG | - | chr7_3:12133745-12133764 | None:intergenic | 45.0% | |
| ! | ATTTTTCGCCCGCTAGTGAA+GGG | + | chr7_3:12134282-12134301 | Msa1093050:intron | 45.0% |
| ACTCGGACACTTCAAGCAAA+TGG | - | chr7_3:12134836-12134855 | None:intergenic | 45.0% | |
| AACACTGGTGCAAAAGCAAG+TGG | - | chr7_3:12135143-12135162 | None:intergenic | 45.0% | |
| AAAAGTCAGGGAAAGCTCTC+TGG | + | chr7_3:12135187-12135206 | Msa1093050:intron | 45.0% | |
| ! | CTCTGGTGCTAGATTCTTGA+AGG | + | chr7_3:12135287-12135306 | Msa1093050:intron | 45.0% |
| TGGGCGGATACCTTATGATA+CGG | + | chr7_3:12135406-12135425 | Msa1093050:intron | 45.0% | |
| TAATGAGTACGGGTATCTGC+GGG | - | chr7_3:12135455-12135474 | None:intergenic | 45.0% | |
| ! | ATTGAGTGTCAGTGGTTTGG+AGG | + | chr7_3:12136168-12136187 | Msa1093050:intron | 45.0% |
| TGGAGGTTATGTCATATGCC+TGG | + | chr7_3:12136185-12136204 | Msa1093050:intron | 45.0% | |
| ! | GCACCGATACTTACGATCAA+AGG | + | chr7_3:12136506-12136525 | Msa1093050:intron | 45.0% |
| ! | CTTACGATCAAAGGTGTGTC+TGG | + | chr7_3:12136515-12136534 | Msa1093050:intron | 45.0% |
| !! | GGAGAGAGTGTCACAATTGA+AGG | + | chr7_3:12137020-12137039 | Msa1093050:CDS | 45.0% |
| !!! | TTTTTAACTATTTAATTAAT+TGG | + | chr7_3:12131444-12131463 | Msa1093050:intron | 5.0% |
| !! | AAAAAAAAAAAAAAAAAAAC+AGG | - | chr7_3:12134779-12134798 | None:intergenic | 5.0% |
| AGAGACAGAGACAGAGAACG+AGG | + | chr7_3:12131545-12131564 | Msa1093050:CDS | 50.0% | |
| ACTCCTCCACCCAAATCTCT+TGG | + | chr7_3:12131605-12131624 | Msa1093050:CDS | 50.0% | |
| ACCAACGCATGTCTGACACT+GGG | - | chr7_3:12131750-12131769 | None:intergenic | 50.0% | |
| TACCCCTTAACCAAGTGGGT+AGG | + | chr7_3:12132011-12132030 | Msa1093050:intron | 50.0% | |
| ACCCCTTAACCAAGTGGGTA+GGG | + | chr7_3:12132012-12132031 | Msa1093050:intron | 50.0% | |
| ACCCCTACCCACTTGGTTAA+GGG | - | chr7_3:12132017-12132036 | None:intergenic | 50.0% | |
| GGGGTCTGAATGTCTGATCT+CGG | + | chr7_3:12132032-12132051 | Msa1093050:intron | 50.0% | |
| GTGGGGCTACAATGATTAGG+TGG | - | chr7_3:12132750-12132769 | None:intergenic | 50.0% | |
| GCCGCACTATAGCATTGTTG+CGG | + | chr7_3:12133035-12133054 | Msa1093050:intron | 50.0% | |
| ACCGCCTTATCCCACTAAGT+GGG | + | chr7_3:12133076-12133095 | Msa1093050:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr7_3:12133081-12133100 | Msa1093050:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | + | chr7_3:12133255-12133274 | Msa1093050:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr7_3:12133402-12133421 | None:intergenic | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr7_3:12133422-12133441 | None:intergenic | 50.0% |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr7_3:12133483-12133502 | None:intergenic | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | - | chr7_3:12133703-12133722 | None:intergenic | 50.0% | |
| CGGGCGAAAAATCAGCTTTG+AGG | - | chr7_3:12134274-12134293 | None:intergenic | 50.0% | |
| ! | GATTTTTCGCCCGCTAGTGA+AGG | + | chr7_3:12134281-12134300 | Msa1093050:intron | 50.0% |
| TGATCACTCTTAAACGGCGG+TGG | - | chr7_3:12134705-12134724 | None:intergenic | 50.0% | |
| ATCTGTGGATACCCGCTTAG+CGG | + | chr7_3:12135677-12135696 | Msa1093050:intron | 50.0% | |
| CATATCCGTATCCGCTAAGC+GGG | - | chr7_3:12135691-12135710 | None:intergenic | 50.0% | |
| CCATATCCGTATCCGCTAAG+CGG | - | chr7_3:12135692-12135711 | None:intergenic | 50.0% | |
| GATATTTGTGTCCGCCCAGT+TGG | - | chr7_3:12135739-12135758 | None:intergenic | 50.0% | |
| CACTCAATCTTCCCACGAGA+AGG | - | chr7_3:12136156-12136175 | None:intergenic | 50.0% | |
| GTGGGAAGATTGAGTGTCAG+TGG | + | chr7_3:12136160-12136179 | Msa1093050:intron | 50.0% | |
| ! | AGGCTCGATGTTTTGTCGAC+AGG | + | chr7_3:12137116-12137135 | Msa1093050:CDS | 50.0% |
| ACGCCAAGAGATTTGGGTGG+AGG | - | chr7_3:12131611-12131630 | None:intergenic | 55.0% | |
| CGAACGCCAAGAGATTTGGG+TGG | - | chr7_3:12131614-12131633 | None:intergenic | 55.0% | |
| TCCCAGTGTCAGACATGCGT+TGG | + | chr7_3:12131746-12131765 | Msa1093050:intron | 55.0% | |
| CACCAACGCATGTCTGACAC+TGG | - | chr7_3:12131751-12131770 | None:intergenic | 55.0% | |
| !! | GTGTCGTGTGGGTGTTGGTT+TGG | - | chr7_3:12131775-12131794 | None:intergenic | 55.0% |
| ! | CATAGGTGTCGTGTGGGTGT+TGG | - | chr7_3:12131780-12131799 | None:intergenic | 55.0% |
| CCCCTACCCACTTGGTTAAG+GGG | - | chr7_3:12132016-12132035 | None:intergenic | 55.0% | |
| CCCCTTAACCAAGTGGGTAG+GGG | + | chr7_3:12132013-12132032 | Msa1093050:intron | 55.0% | |
| GACCCCTACCCACTTGGTTA+AGG | - | chr7_3:12132018-12132037 | None:intergenic | 55.0% | |
| CATTCAGACCCCTACCCACT+TGG | - | chr7_3:12132024-12132043 | None:intergenic | 55.0% | |
| CACCGCCTTATCCCACTAAG+TGG | + | chr7_3:12133075-12133094 | Msa1093050:intron | 55.0% | |
| CCCCACTTAGTGGGATAAGG+CGG | - | chr7_3:12133080-12133099 | None:intergenic | 55.0% | |
| CCGCCTTATCCCACTAAGTG+GGG | + | chr7_3:12133077-12133096 | Msa1093050:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr7_3:12133083-12133102 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr7_3:12133089-12133108 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr7_3:12133090-12133109 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr7_3:12133089-12133108 | Msa1093050:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | + | chr7_3:12133256-12133275 | Msa1093050:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr7_3:12133410-12133429 | None:intergenic | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | chr7_3:12133466-12133485 | None:intergenic | 55.0% |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr7_3:12133496-12133515 | None:intergenic | 55.0% | |
| TCATCACGTTAGGGGATGCG+TGG | - | chr7_3:12133941-12133960 | None:intergenic | 55.0% | |
| TGTCCGAGTCCCTTAGCACT+CGG | + | chr7_3:12134847-12134866 | Msa1093050:intron | 55.0% | |
| ! | GGGTTTGGTCCGAGTGCTAA+GGG | - | chr7_3:12134859-12134878 | None:intergenic | 55.0% |
| ! | TGGGTTTGGTCCGAGTGCTA+AGG | - | chr7_3:12134860-12134879 | None:intergenic | 55.0% |
| CACTCGGACCAAACCCATAC+TGG | + | chr7_3:12134863-12134882 | Msa1093050:intron | 55.0% | |
| ! | GGATACCCGCTTAGCGGATA+CGG | + | chr7_3:12135683-12135702 | Msa1093050:intron | 55.0% |
| ! | CCGCTTAGCGGATACGGATA+TGG | + | chr7_3:12135689-12135708 | Msa1093050:intron | 55.0% |
| TTCGGTACCAGCTCCGCAAA+GGG | + | chr7_3:12137072-12137091 | Msa1093050:CDS | 55.0% | |
| CGTATTTCCCTTTGCGGAGC+TGG | - | chr7_3:12137082-12137101 | None:intergenic | 55.0% | |
| CACGTTAGGGGATGCGTGGT+TGG | - | chr7_3:12133937-12133956 | None:intergenic | 60.0% | |
| GGTCCGAGTGCTAAGGGACT+CGG | - | chr7_3:12134853-12134872 | None:intergenic | 60.0% | |
| CTTCGGTACCAGCTCCGCAA+AGG | + | chr7_3:12137071-12137090 | Msa1093050:CDS | 60.0% | |
| GAGAAGACCCGTAGACGCCG+TGG | - | chr7_3:12133266-12133285 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 12131263 | 12137353 | 12131263 | ID=Msa1093050;Name=Msa1093050 |
| chr7_3 | mRNA | 12131263 | 12137353 | 12131263 | ID=Msa1093050-mRNA-1;Parent=Msa1093050;Name=Msa1093050-mRNA-1;_AED=0.08;_eAED=0.08;_QI=102|0.5|0.66|1|0.5|0.66|3|166|119 |
| chr7_3 | exon | 12131263 | 12131427 | 12131263 | ID=Msa1093050-mRNA-1:exon:2900;Parent=Msa1093050-mRNA-1 |
| chr7_3 | exon | 12131512 | 12131628 | 12131512 | ID=Msa1093050-mRNA-1:exon:2901;Parent=Msa1093050-mRNA-1 |
| chr7_3 | exon | 12137008 | 12137353 | 12137008 | ID=Msa1093050-mRNA-1:exon:2902;Parent=Msa1093050-mRNA-1 |
| chr7_3 | five_prime_UTR | 12131263 | 12131364 | 12131263 | ID=Msa1093050-mRNA-1:five_prime_utr;Parent=Msa1093050-mRNA-1 |
| chr7_3 | CDS | 12131365 | 12131427 | 12131365 | ID=Msa1093050-mRNA-1:cds;Parent=Msa1093050-mRNA-1 |
| chr7_3 | CDS | 12131512 | 12131628 | 12131512 | ID=Msa1093050-mRNA-1:cds;Parent=Msa1093050-mRNA-1 |
| chr7_3 | CDS | 12137008 | 12137187 | 12137008 | ID=Msa1093050-mRNA-1:cds;Parent=Msa1093050-mRNA-1 |
| chr7_3 | three_prime_UTR | 12137188 | 12137353 | 12137188 | ID=Msa1093050-mRNA-1:three_prime_utr;Parent=Msa1093050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
