AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1376010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1376010 MtrunA17_Chr0c12g0493641 98.973 584 6 0 1 584 1 584 0.0 1196
Msa1376010 MtrunA17_Chr4g0077041 82.156 269 6 1 287 555 1 227 1.49e-157 450
Msa1376010 MtrunA17_Chr4g0077021 97.297 111 3 0 1 111 1 111 1.18e-72 228
Msa1376010 MtrunA17_Chr1g0176461 31.681 565 319 21 38 571 42 570 3.29e-63 218
Msa1376010 MtrunA17_Chr4g0077031 100.000 70 0 0 152 221 3 72 2.26e-41 145
Msa1376010 MtrunA17_Chr8g0373291 24.744 586 325 29 45 555 4 548 1.60e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1376010 AT1G57770.1 80.952 525 100 0 60 584 50 574 0.0 900
Msa1376010 AT1G06820.1 31.758 529 310 16 60 571 75 569 3.00e-65 224
Msa1376010 AT1G06820.3 31.758 529 310 16 60 571 75 569 4.79e-65 223
Msa1376010 AT1G06820.4 34.181 354 216 9 224 571 108 450 7.56e-53 187
Msa1376010 AT1G06820.2 29.501 461 276 15 60 504 75 502 1.90e-44 166
Msa1376010 AT5G49555.1 22.968 566 343 25 52 555 3 537 8.31e-14 74.7

Find 171 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCAAAGAGTCAAGTATT+TGG 0.236602 tig0019777:+116256 None:intergenic
ATTGCTCACAACAGCCTTCT+TGG 0.241353 tig0019777:+115506 None:intergenic
TGCTCAAGTTCTTGATGCTT+TGG 0.242947 tig0019777:-116604 Msa1376010:CDS
GATATTGAAAGAAAGGAAAT+TGG 0.252127 tig0019777:-117107 Msa1376010:five_prime_UTR
TCAAGAATGGCAGAAGCTTT+TGG 0.272982 tig0019777:-116454 Msa1376010:CDS
TTACTTTCTTTCTTGCTTGC+TGG 0.273947 tig0019777:-116201 Msa1376010:CDS
TGCCATTCTTGAACAGCTTC+AGG 0.275584 tig0019777:+116465 None:intergenic
CAACAACATAATATTTGATT+TGG 0.276779 tig0019777:-117031 Msa1376010:five_prime_UTR
GAGTCAAGTATTTGGGAAAA+AGG 0.286218 tig0019777:+116264 None:intergenic
GCTCAAGTTCTTGATGCTTT+GGG 0.288521 tig0019777:-116603 Msa1376010:CDS
ATAATATTTGATTTGGTGTT+TGG 0.296031 tig0019777:-117024 Msa1376010:five_prime_UTR
TTCCAAAGTCTTACTCAAAT+AGG 0.312564 tig0019777:-115440 Msa1376010:CDS
ATCATATAGTTGTAAATGAT+TGG 0.312848 tig0019777:-115253 Msa1376010:CDS
AACTCAAATGGTTCAGTTCC+TGG 0.320765 tig0019777:+115125 None:intergenic
ATCTTTCATGCATCTCCATT+TGG 0.323021 tig0019777:-115394 Msa1376010:CDS
CTGAGGACCCATTTGGAAAA+AGG 0.326579 tig0019777:+116317 None:intergenic
AGTTTCTAATACTTGGTAGA+TGG 0.333039 tig0019777:+114543 None:intergenic
GCTGGTACAGATACCTTTCC+TGG 0.338263 tig0019777:-114818 Msa1376010:CDS
TTGCAAAGAGTCAAGTATTT+GGG 0.338675 tig0019777:+116257 None:intergenic
AGCTTTAAGATTTCTGTATT+CGG 0.338946 tig0019777:+115076 None:intergenic
CTATCTGTTCGAGGAGATTT+CGG 0.340613 tig0019777:-116387 Msa1376010:CDS
GTGTTACATGCTTATCTTCC+AGG 0.349073 tig0019777:-115143 Msa1376010:CDS
CAACAATAAAGGTGTGGAAT+TGG 0.355420 tig0019777:+114785 None:intergenic
TCTTTCATGCATCTCCATTT+GGG 0.358441 tig0019777:-115393 Msa1376010:CDS
TCCCAGCTGCTTGATGCAAT+TGG 0.358531 tig0019777:-114671 Msa1376010:CDS
CCTGCGCTACTTATGATTCA+TGG 0.371994 tig0019777:-116569 Msa1376010:CDS
TGAAGAGGATATTGAAAGAA+AGG 0.379979 tig0019777:-117114 Msa1376010:five_prime_UTR
AATAGTACATAAACTTTGTA+TGG 0.385743 tig0019777:-114610 Msa1376010:three_prime_UTR
GAAACAGATGTAATTGTGAT+TGG 0.389065 tig0019777:-116813 Msa1376010:CDS
ATCCTATTTGAGTAAGACTT+TGG 0.389095 tig0019777:+115438 None:intergenic
CTCACTCTCATTACATTACA+AGG 0.391228 tig0019777:+116945 None:intergenic
TGGAGTCTCCACAACAATAA+AGG 0.393345 tig0019777:+114774 None:intergenic
TACACCCCTCATCGCATTCA+TGG 0.395246 tig0019777:+116983 None:intergenic
AGAATCCTTTCATACGCAAT+TGG 0.397759 tig0019777:-116230 Msa1376010:CDS
ACTCCTAATCTGGCACCTAC+TGG 0.397996 tig0019777:-115173 Msa1376010:CDS
TTCCAATTGCATCAAGCAGC+TGG 0.400845 tig0019777:+114669 None:intergenic
CATTTCTCCCTGCTGAATCC+TGG 0.401568 tig0019777:+114923 None:intergenic
ATAAAAGAGTTTCTAATACT+TGG 0.412090 tig0019777:+114536 None:intergenic
TCATATAGTTGTAAATGATT+GGG 0.417919 tig0019777:-115252 Msa1376010:CDS
TAGTGTACTTACTCCTAATC+TGG 0.419014 tig0019777:-115183 Msa1376010:CDS
AACTGAACCATTTGAGTTGT+GGG 0.419173 tig0019777:-115120 Msa1376010:CDS
CAGGGTATACGCAGCGATCT+AGG 0.420176 tig0019777:-115281 Msa1376010:CDS
TCCGGTCCATCATTATTCTC+TGG 0.421373 tig0019777:-116660 Msa1376010:CDS
ATTGTGATTGGGAGTGGTAT+TGG 0.424946 tig0019777:-116801 Msa1376010:CDS
GTCATAGTAATGGGAGGATT+AGG 0.428264 tig0019777:-116884 Msa1376010:CDS
GTTGTAAATGATTGGGAAAG+AGG 0.432129 tig0019777:-115245 Msa1376010:CDS
TCACACATCAAAGGTTTCTT+CGG 0.434054 tig0019777:-114874 Msa1376010:CDS
GTACGAGGACTAGAGAAGTT+TGG 0.436491 tig0019777:-115695 Msa1376010:CDS
ATCATCATAGTCATAGTAAT+GGG 0.437707 tig0019777:-116893 Msa1376010:CDS
CGTGACAAGAAATCAGCTTC+AGG 0.438051 tig0019777:+116534 None:intergenic
AAATCTCCTCGAACAGATAG+AGG 0.446661 tig0019777:+116390 None:intergenic
AAATGTGAAGTGAAGTTAGT+TGG 0.458953 tig0019777:-114905 Msa1376010:CDS
ACTTTGGAACAACTTCTTGA+GGG 0.464503 tig0019777:+115454 None:intergenic
GCACCACTGGCAGCAACTGC+AGG 0.466053 tig0019777:+114731 None:intergenic
TCTGTACCAGCTTGTATAGC+TGG 0.473355 tig0019777:+114830 None:intergenic
CAGTGGGACCAGGATTCAGC+AGG 0.478022 tig0019777:-114931 Msa1376010:CDS
AGGTTTACATGTTTGCAGAA+TGG 0.481167 tig0019777:-115781 Msa1376010:CDS
CTCTTATTGTCTAACCGTAA+AGG 0.481489 tig0019777:-114447 Msa1376010:three_prime_UTR
ACCGGAGAAAGCATTAGTTT+AGG 0.482794 tig0019777:-117147 None:intergenic
AAAGGCTATAAGTTTGATTC+CGG 0.484501 tig0019777:-116678 Msa1376010:CDS
GATTAGGAAAGGTGGGGTTG+TGG 0.485581 tig0019777:-116868 Msa1376010:CDS
ATTCCACACCTTTATTGTTG+TGG 0.492890 tig0019777:-114782 Msa1376010:CDS
AAACAGATGTAATTGTGATT+GGG 0.492966 tig0019777:-116812 Msa1376010:CDS
ATATTGAAAGAAAGGAAATT+GGG 0.493766 tig0019777:-117106 Msa1376010:five_prime_UTR
CATCATCATAGTCATAGTAA+TGG 0.495952 tig0019777:-116894 Msa1376010:CDS
GTGGAGAGAGCAGTGGGACC+AGG 0.499060 tig0019777:-114941 Msa1376010:CDS
ATGGGAGGATTAGGAAAGGT+GGG 0.499467 tig0019777:-116875 Msa1376010:CDS
CAGCACCTCCAGCATGGTCG+TGG 0.499748 tig0019777:+116718 None:intergenic
CGGAGGAACAGAGGAACATA+TGG 0.499814 tig0019777:-114854 Msa1376010:CDS
AGTCCTTCCCACAACTCAAA+TGG 0.501774 tig0019777:+115113 None:intergenic
CAATACCTGCAGCTCCATCA+AGG 0.503593 tig0019777:+115729 None:intergenic
TCCCTTGTCTACAGCTGCAA+TGG 0.505505 tig0019777:-116421 Msa1376010:CDS
AGAAATCAGCTTCAGGTACA+TGG 0.506854 tig0019777:+116541 None:intergenic
CTCCTAATCTGGCACCTACT+GGG 0.508705 tig0019777:-115172 Msa1376010:CDS
GCTTCTCAGCTTCACTCCAA+TGG 0.509152 tig0019777:+115616 None:intergenic
GTTTCTAATACTTGGTAGAT+GGG 0.509848 tig0019777:+114544 None:intergenic
CCTCAGCATCAAATCCCAAA+TGG 0.511011 tig0019777:+115379 None:intergenic
CCATGAATCATAAGTAGCGC+AGG 0.513899 tig0019777:+116569 None:intergenic
GACGCCAATGCCAGGAAAAG+TGG 0.514468 tig0019777:+114754 None:intergenic
TAGTATATTGTCTGCAGAGA+TGG 0.518916 tig0019777:-116166 Msa1376010:intron
ATTCATGGCATGGCATGGCA+TGG 0.522894 tig0019777:+116998 None:intergenic
TTCCCAGTAGGTGCCAGATT+AGG 0.527245 tig0019777:+115170 None:intergenic
ACCAGAGAATAATGATGGAC+CGG 0.531175 tig0019777:+116659 None:intergenic
GAACTGAACCATTTGAGTTG+TGG 0.531241 tig0019777:-115121 Msa1376010:CDS
ATTAGCTACAATTGCACCAC+TGG 0.535074 tig0019777:+114718 None:intergenic
GACTTTGGAACAACTTCTTG+AGG 0.536940 tig0019777:+115453 None:intergenic
GTCCTGAAGCTGTTCAAGAA+TGG 0.537122 tig0019777:-116467 Msa1376010:CDS
TCAATCCAATTGCGTATGAA+AGG 0.537955 tig0019777:+116225 None:intergenic
TGCAAACCAGAGAATAATGA+TGG 0.543994 tig0019777:+116654 None:intergenic
TTCGAAAGCCACGACCATGC+TGG 0.544052 tig0019777:-116726 Msa1376010:CDS
TTCTCTGGTTTGCAGTCAAG+AGG 0.544317 tig0019777:-116645 Msa1376010:CDS
AAGGACCTTCACAACTATGC+AGG 0.545742 tig0019777:-116489 Msa1376010:CDS
TGAAAGAAAGGAAATTGGGT+AGG 0.546300 tig0019777:-117102 Msa1376010:five_prime_UTR
CCCTCATCGCATTCATGGCA+TGG 0.553831 tig0019777:+116988 None:intergenic
GACGTGGCTAAACTGAAGAC+AGG 0.554783 tig0019777:-117074 Msa1376010:five_prime_UTR
CGCTACTTATGATTCATGGA+TGG 0.556127 tig0019777:-116565 Msa1376010:CDS
GTCCCTGCAGTTGCTGCCAG+TGG 0.557851 tig0019777:-114734 Msa1376010:CDS
AGCCATTGCAGCTGTAGACA+AGG 0.561564 tig0019777:+116419 None:intergenic
CCATGCCATGAATGCGATGA+GGG 0.562349 tig0019777:-116988 Msa1376010:CDS
AATACCTGCAGCTCCATCAA+GGG 0.564396 tig0019777:+115730 None:intergenic
TCCAATTGCATCAAGCAGCT+GGG 0.566641 tig0019777:+114670 None:intergenic
TTCATGGCATGGCATGGCAT+GGG 0.566917 tig0019777:+116999 None:intergenic
GTGATTGGGAGTGGTATTGG+TGG 0.570399 tig0019777:-116798 Msa1376010:CDS
GAAAGAAAGGAAATTGGGTA+GGG 0.570727 tig0019777:-117101 Msa1376010:five_prime_UTR
GCATCAAGAACTTGAGCAAG+AGG 0.572179 tig0019777:+116609 None:intergenic
ATCGCATTCATGGCATGGCA+TGG 0.573566 tig0019777:+116993 None:intergenic
GTTGAAAATGACAGAGCCAT+TGG 0.574831 tig0019777:-115632 Msa1376010:CDS
CCATTTGGGATTTGATGCTG+AGG 0.576837 tig0019777:-115379 Msa1376010:intron
TTTGCAGTCAAGAGGTCCAC+AGG 0.577098 tig0019777:-116637 Msa1376010:CDS
CACATCAAAGGTTTCTTCGG+AGG 0.578196 tig0019777:-114871 Msa1376010:CDS
CAGGACCTGCATAGTTGTGA+AGG 0.579792 tig0019777:+116484 None:intergenic
AGAGCAGTGGAGAGAGCAGT+GGG 0.579813 tig0019777:-114947 Msa1376010:CDS
GAAGTCCACTCACACATCAA+AGG 0.579934 tig0019777:-114883 Msa1376010:CDS
GCAGTTCGTACATGCCAAGA+AGG 0.580617 tig0019777:-115520 Msa1376010:intron
GAGAGCAGTGGAGAGAGCAG+TGG 0.581460 tig0019777:-114948 Msa1376010:CDS
ATCATAAGTAGCGCAGGGGA+CGG 0.583077 tig0019777:+116575 None:intergenic
ACTGAGTTGTGCAGCACTGT+TGG 0.584888 tig0019777:-116775 Msa1376010:CDS
AATGGGAGGATTAGGAAAGG+TGG 0.589689 tig0019777:-116876 Msa1376010:CDS
GCCATTGCAGCTGTAGACAA+GGG 0.590322 tig0019777:+116420 None:intergenic
CGAGGACTAGAGAAGTTTGG+TGG 0.591605 tig0019777:-115692 Msa1376010:CDS
CAAACAACAAATAGATAATG+TGG 0.592493 tig0019777:-114970 Msa1376010:intron
GATGTAATTGTGATTGGGAG+TGG 0.593011 tig0019777:-116807 Msa1376010:CDS
AATCTCCTCGAACAGATAGA+GGG 0.593766 tig0019777:+116391 None:intergenic
AGATTAGGAGTAAGTACACT+AGG 0.595451 tig0019777:+115185 None:intergenic
GCTGATTTCTTGTCACGCAT+AGG 0.597690 tig0019777:-116528 Msa1376010:CDS
CACCACTGGCAGCAACTGCA+GGG 0.605933 tig0019777:+114732 None:intergenic
TGGAGTTGAATGTCCAGGAA+AGG 0.606615 tig0019777:+114805 None:intergenic
AATACTTGGTAGATGGGCAA+AGG 0.607524 tig0019777:+114550 None:intergenic
CATGAATCATAAGTAGCGCA+GGG 0.607675 tig0019777:+116570 None:intergenic
GAACCATTTGAGTTGTGGGA+AGG 0.609081 tig0019777:-115116 Msa1376010:CDS
TTTGCAGAATGGTACAAACC+AGG 0.612324 tig0019777:-115770 Msa1376010:CDS
TATGGACCAGCTATACAAGC+TGG 0.613740 tig0019777:-114836 Msa1376010:CDS
GTGTGAGAATTGCATCATGC+GGG 0.614927 tig0019777:+114637 None:intergenic
TTGCAGAATGGTACAAACCA+GGG 0.620272 tig0019777:-115769 Msa1376010:CDS
ATAGATAATGTGGAGAGCAG+TGG 0.622582 tig0019777:-114960 Msa1376010:intron
GGAATTGGAGTTGAATGTCC+AGG 0.624562 tig0019777:+114800 None:intergenic
AGTAATGGGAGGATTAGGAA+AGG 0.625364 tig0019777:-116879 Msa1376010:CDS
AGGTTTCTTCGGAGGAACAG+AGG 0.626999 tig0019777:-114863 Msa1376010:CDS
GACTAGAGAAGTTTGGTGGG+CGG 0.629357 tig0019777:-115688 Msa1376010:CDS
ATTGTTGATGCTCTTGTACG+AGG 0.629566 tig0019777:-115710 Msa1376010:CDS
CATCAAGAACTTGAGCAAGA+GGG 0.633604 tig0019777:+116610 None:intergenic
ATTGGAGTGAAGCTGAGAAG+CGG 0.638801 tig0019777:-115614 Msa1376010:CDS
GCGATGAGGGGTGTAAGTGT+TGG 0.638850 tig0019777:-116975 Msa1376010:CDS
AATGAGCAGCACCTCCAGCA+TGG 0.642493 tig0019777:+116712 None:intergenic
ATACCTGCAGCTCCATCAAG+GGG 0.643456 tig0019777:+115731 None:intergenic
TCTTAAAGCTCAAAGATCAG+AGG 0.643901 tig0019777:-115063 Msa1376010:intron
TGCAGAATGGTACAAACCAG+GGG 0.644445 tig0019777:-115768 Msa1376010:CDS
ATCTCCTCGAACAGATAGAG+GGG 0.646167 tig0019777:+116392 None:intergenic
ATCATAGTCATAGTAATGGG+AGG 0.651087 tig0019777:-116890 Msa1376010:CDS
AAAAGGTGAGAGAAGTTGTG+TGG 0.652152 tig0019777:+116281 None:intergenic
TGTAACACATGTTTCCCAGT+AGG 0.652977 tig0019777:+115158 None:intergenic
TGAGCAAGAGGGTTAGCCTG+TGG 0.654171 tig0019777:+116621 None:intergenic
GATTTCTCTTCAAAGTCACG+TGG 0.656256 tig0019777:-115666 Msa1376010:CDS
GAGGACTAGAGAAGTTTGGT+GGG 0.661720 tig0019777:-115691 Msa1376010:CDS
TCTCCACAACAATAAAGGTG+TGG 0.665845 tig0019777:+114779 None:intergenic
AGAAACCTTTGATGTGTGAG+TGG 0.673422 tig0019777:+114878 None:intergenic
AGGTGCATATCTAGCAGCAG+CGG 0.676346 tig0019777:+116353 None:intergenic
GAAAGCCACGACCATGCTGG+AGG 0.682926 tig0019777:-116723 Msa1376010:CDS
TGGGAGGATTAGGAAAGGTG+GGG 0.683293 tig0019777:-116874 Msa1376010:CDS
AGTGGGACCAGGATTCAGCA+GGG 0.693423 tig0019777:-114930 Msa1376010:CDS
TGTGTGAGAATTGCATCATG+CGG 0.698234 tig0019777:+114636 None:intergenic
TGTGAGCAATGCATCAATGT+GGG 0.699079 tig0019777:-115493 Msa1376010:CDS
TTGTGAGCAATGCATCAATG+TGG 0.700183 tig0019777:-115494 Msa1376010:CDS
GCCATGCCATGAATGCGATG+AGG 0.701444 tig0019777:-116989 Msa1376010:CDS
TCTCCTCGAACAGATAGAGG+GGG 0.703760 tig0019777:+116393 None:intergenic
GTGGAACGAAGAGCAGCCTG+AGG 0.714071 tig0019777:+116300 None:intergenic
ATGAATCATAAGTAGCGCAG+GGG 0.721253 tig0019777:+116571 None:intergenic
CATGCCATGAATGCGATGAG+GGG 0.728710 tig0019777:-116987 Msa1376010:CDS
GCAGAATGGTACAAACCAGG+GGG 0.746992 tig0019777:-115767 Msa1376010:CDS
TACCTGCAGCTCCATCAAGG+GGG 0.749948 tig0019777:+115732 None:intergenic
AATTGGGTAGGGTAGTGACG+TGG 0.751723 tig0019777:-117090 Msa1376010:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTTAAGAAATGAAAT+TGG + tig0019777:115633-115652 None:intergenic 15.0%
!! TCAAAATTAATATACTTACT+TGG + tig0019777:115962-115981 None:intergenic 15.0%
!!! TCATATTTTGTATATATACA+TGG - tig0019777:117078-117097 Msa1376010:five_prime_UTR 15.0%
!! ATATTGAAAGAAAGGAAATT+GGG - tig0019777:114444-114463 Msa1376010:three_prime_UTR 20.0%
!! CAACAACATAATATTTGATT+TGG - tig0019777:114519-114538 Msa1376010:three_prime_UTR 20.0%
!!! ATAATATTTGATTTGGTGTT+TGG - tig0019777:114526-114545 Msa1376010:three_prime_UTR 20.0%
!! ATAACACATAAATCTCTAAA+GGG - tig0019777:115550-115569 Msa1376010:intron 20.0%
!! ATCATATAGTTGTAAATGAT+TGG - tig0019777:116297-116316 Msa1376010:CDS 20.0%
!! TCATATAGTTGTAAATGATT+GGG - tig0019777:116298-116317 Msa1376010:CDS 20.0%
!! AATAGTACATAAACTTTGTA+TGG - tig0019777:116940-116959 Msa1376010:CDS 20.0%
!! ATAAAAGAGTTTCTAATACT+TGG + tig0019777:117017-117036 None:intergenic 20.0%
!! GTTCATCAAAAATAAATGTT+AGG + tig0019777:117046-117065 None:intergenic 20.0%
! GATATTGAAAGAAAGGAAAT+TGG - tig0019777:114443-114462 Msa1376010:three_prime_UTR 25.0%
! ATCATCATAGTCATAGTAAT+GGG - tig0019777:114657-114676 Msa1376010:exon 25.0%
! AAACAGATGTAATTGTGATT+GGG - tig0019777:114738-114757 Msa1376010:CDS 25.0%
!!! AAAAAGGTATTGAAAAGAGA+AGG + tig0019777:115220-115239 None:intergenic 25.0%
!! TTTCAATACCTTTTTCCAAA+TGG - tig0019777:115225-115244 Msa1376010:CDS 25.0%
!! TTCAATACCTTTTTCCAAAT+GGG - tig0019777:115226-115245 Msa1376010:CDS 25.0%
! CATAACACATAAATCTCTAA+AGG - tig0019777:115549-115568 Msa1376010:intron 25.0%
!!! AGCTTTAAGATTTCTGTATT+CGG + tig0019777:116477-116496 None:intergenic 25.0%
! CAAACAACAAATAGATAATG+TGG - tig0019777:116580-116599 Msa1376010:CDS 25.0%
!! TTAGGTGAATGTTTTTGAAG+AGG - tig0019777:114421-114440 Msa1376010:three_prime_UTR 30.0%
TGAAGAGGATATTGAAAGAA+AGG - tig0019777:114436-114455 Msa1376010:three_prime_UTR 30.0%
CATCATCATAGTCATAGTAA+TGG - tig0019777:114656-114675 Msa1376010:exon 30.0%
GAAACAGATGTAATTGTGAT+TGG - tig0019777:114737-114756 Msa1376010:CDS 30.0%
AAAGGCTATAAGTTTGATTC+CGG - tig0019777:114872-114891 Msa1376010:CDS 30.0%
TTGCAAAGAGTCAAGTATTT+GGG + tig0019777:115296-115315 None:intergenic 30.0%
AGGATAGAAACTAGTTATTG+TGG + tig0019777:115491-115510 None:intergenic 30.0%
TTCCAAAGTCTTACTCAAAT+AGG - tig0019777:116110-116129 Msa1376010:intron 30.0%
ATCCTATTTGAGTAAGACTT+TGG + tig0019777:116115-116134 None:intergenic 30.0%
AAATGTGAAGTGAAGTTAGT+TGG - tig0019777:116645-116664 Msa1376010:CDS 30.0%
GTTTCTAATACTTGGTAGAT+GGG + tig0019777:117009-117028 None:intergenic 30.0%
AGTTTCTAATACTTGGTAGA+TGG + tig0019777:117010-117029 None:intergenic 30.0%
TGAAAGAAAGGAAATTGGGT+AGG - tig0019777:114448-114467 Msa1376010:three_prime_UTR 35.0%
GAAAGAAAGGAAATTGGGTA+GGG - tig0019777:114449-114468 Msa1376010:three_prime_UTR 35.0%
CTCACTCTCATTACATTACA+AGG + tig0019777:114608-114627 None:intergenic 35.0%
! ATCATAGTCATAGTAATGGG+AGG - tig0019777:114660-114679 Msa1376010:exon 35.0%
! GCTCATTCTTTTGATGTCAA+AGG - tig0019777:114854-114873 Msa1376010:CDS 35.0%
TGCAAACCAGAGAATAATGA+TGG + tig0019777:114899-114918 None:intergenic 35.0%
! AGGTCCTACTGAGTTTTTAA+AGG - tig0019777:115042-115061 Msa1376010:intron 35.0%
! AGGTCCTTTAAAAACTCAGT+AGG + tig0019777:115049-115068 None:intergenic 35.0%
GAGTCAAGTATTTGGGAAAA+AGG + tig0019777:115289-115308 None:intergenic 35.0%
GTTGCAAAGAGTCAAGTATT+TGG + tig0019777:115297-115316 None:intergenic 35.0%
AGAATCCTTTCATACGCAAT+TGG - tig0019777:115320-115339 Msa1376010:intron 35.0%
TCAATCCAATTGCGTATGAA+AGG + tig0019777:115328-115347 None:intergenic 35.0%
TTACTTTCTTTCTTGCTTGC+TGG - tig0019777:115349-115368 Msa1376010:intron 35.0%
TAGTATATTGTCTGCAGAGA+TGG - tig0019777:115384-115403 Msa1376010:CDS 35.0%
TCTGCACAAAAAAATGAGAG+AGG + tig0019777:115511-115530 None:intergenic 35.0%
ACTGTCTCTAAGTAAACAAC+AGG + tig0019777:115596-115615 None:intergenic 35.0%
ACCTAAAAGCAGCAGTTAAA+TGG - tig0019777:115652-115671 Msa1376010:CDS 35.0%
!!! TCCATTTAACTGCTGCTTTT+AGG + tig0019777:115656-115675 None:intergenic 35.0%
GAAAACTAACGAAATAGTGC+TGG - tig0019777:115678-115697 Msa1376010:CDS 35.0%
AGGTTTACATGTTTGCAGAA+TGG - tig0019777:115769-115788 Msa1376010:CDS 35.0%
!! ACTTTGGAACAACTTCTTGA+GGG + tig0019777:116099-116118 None:intergenic 35.0%
ATCTTTCATGCATCTCCATT+TGG - tig0019777:116156-116175 Msa1376010:intron 35.0%
TCTTTCATGCATCTCCATTT+GGG - tig0019777:116157-116176 Msa1376010:intron 35.0%
GAATACTTCAAACAGATGCA+TGG + tig0019777:116236-116255 None:intergenic 35.0%
GTTGTAAATGATTGGGAAAG+AGG - tig0019777:116305-116324 Msa1376010:CDS 35.0%
AGATTAGGAGTAAGTACACT+AGG + tig0019777:116368-116387 None:intergenic 35.0%
TAGTGTACTTACTCCTAATC+TGG - tig0019777:116367-116386 Msa1376010:CDS 35.0%
!! AACTGAACCATTTGAGTTGT+GGG - tig0019777:116430-116449 Msa1376010:CDS 35.0%
TCTTAAAGCTCAAAGATCAG+AGG - tig0019777:116487-116506 Msa1376010:CDS 35.0%
TCACACATCAAAGGTTTCTT+CGG - tig0019777:116676-116695 Msa1376010:CDS 35.0%
! CAACAATAAAGGTGTGGAAT+TGG + tig0019777:116768-116787 None:intergenic 35.0%
ATTCCACACCTTTATTGTTG+TGG - tig0019777:116768-116787 Msa1376010:CDS 35.0%
CTCTTATTGTCTAACCGTAA+AGG - tig0019777:117103-117122 Msa1376010:five_prime_UTR 35.0%
! GTCATAGTAATGGGAGGATT+AGG - tig0019777:114666-114685 Msa1376010:CDS 40.0%
! AGTAATGGGAGGATTAGGAA+AGG - tig0019777:114671-114690 Msa1376010:CDS 40.0%
GATGTAATTGTGATTGGGAG+TGG - tig0019777:114743-114762 Msa1376010:CDS 40.0%
ATTGTGATTGGGAGTGGTAT+TGG - tig0019777:114749-114768 Msa1376010:CDS 40.0%
!! ACCAGAGAATAATGATGGAC+CGG + tig0019777:114894-114913 None:intergenic 40.0%
CATCAAGAACTTGAGCAAGA+GGG + tig0019777:114943-114962 None:intergenic 40.0%
TGCTCAAGTTCTTGATGCTT+TGG - tig0019777:114946-114965 Msa1376010:CDS 40.0%
GCTCAAGTTCTTGATGCTTT+GGG - tig0019777:114947-114966 Msa1376010:CDS 40.0%
ATGAATCATAAGTAGCGCAG+GGG + tig0019777:114982-115001 None:intergenic 40.0%
CATGAATCATAAGTAGCGCA+GGG + tig0019777:114983-115002 None:intergenic 40.0%
CGCTACTTATGATTCATGGA+TGG - tig0019777:114985-115004 Msa1376010:intron 40.0%
AGAAATCAGCTTCAGGTACA+TGG + tig0019777:115012-115031 None:intergenic 40.0%
! TCAAGAATGGCAGAAGCTTT+TGG - tig0019777:115096-115115 Msa1376010:CDS 40.0%
AATCTCCTCGAACAGATAGA+GGG + tig0019777:115162-115181 None:intergenic 40.0%
AAATCTCCTCGAACAGATAG+AGG + tig0019777:115163-115182 None:intergenic 40.0%
CTATCTGTTCGAGGAGATTT+CGG - tig0019777:115163-115182 Msa1376010:CDS 40.0%
AAAAGGTGAGAGAAGTTGTG+TGG + tig0019777:115272-115291 None:intergenic 40.0%
!! TGATGAGTGGTAATGGCAAT+TGG + tig0019777:115429-115448 None:intergenic 40.0%
! AATGATTGCACGTTGATGAG+TGG + tig0019777:115442-115461 None:intergenic 40.0%
AACATGTAAACCTGAGGGAA+GGG + tig0019777:115762-115781 None:intergenic 40.0%
AAACATGTAAACCTGAGGGA+AGG + tig0019777:115763-115782 None:intergenic 40.0%
CTGCAAACATGTAAACCTGA+GGG + tig0019777:115767-115786 None:intergenic 40.0%
TCTGCAAACATGTAAACCTG+AGG + tig0019777:115768-115787 None:intergenic 40.0%
TTTGCAGAATGGTACAAACC+AGG - tig0019777:115780-115799 Msa1376010:CDS 40.0%
TTGCAGAATGGTACAAACCA+GGG - tig0019777:115781-115800 Msa1376010:CDS 40.0%
ATTGTTGATGCTCTTGTACG+AGG - tig0019777:115840-115859 Msa1376010:intron 40.0%
GATTTCTCTTCAAAGTCACG+TGG - tig0019777:115884-115903 Msa1376010:intron 40.0%
GTTGAAAATGACAGAGCCAT+TGG - tig0019777:115918-115937 Msa1376010:intron 40.0%
TTGTGAGCAATGCATCAATG+TGG - tig0019777:116056-116075 Msa1376010:intron 40.0%
TGTGAGCAATGCATCAATGT+GGG - tig0019777:116057-116076 Msa1376010:intron 40.0%
!! GACTTTGGAACAACTTCTTG+AGG + tig0019777:116100-116119 None:intergenic 40.0%
TATTCAACATCGAGTGAGCA+GGG - tig0019777:116251-116270 Msa1376010:CDS 40.0%
TGTAACACATGTTTCCCAGT+AGG + tig0019777:116395-116414 None:intergenic 40.0%
GTGTTACATGCTTATCTTCC+AGG - tig0019777:116407-116426 Msa1376010:CDS 40.0%
AACTCAAATGGTTCAGTTCC+TGG + tig0019777:116428-116447 None:intergenic 40.0%
!! GAACTGAACCATTTGAGTTG+TGG - tig0019777:116429-116448 Msa1376010:CDS 40.0%
ATAGATAATGTGGAGAGCAG+TGG - tig0019777:116590-116609 Msa1376010:CDS 40.0%
AGAAACCTTTGATGTGTGAG+TGG + tig0019777:116675-116694 None:intergenic 40.0%
TCTCCACAACAATAAAGGTG+TGG + tig0019777:116774-116793 None:intergenic 40.0%
TGGAGTCTCCACAACAATAA+AGG + tig0019777:116779-116798 None:intergenic 40.0%
ATTAGCTACAATTGCACCAC+TGG + tig0019777:116835-116854 None:intergenic 40.0%
TGTGTGAGAATTGCATCATG+CGG + tig0019777:116917-116936 None:intergenic 40.0%
AATACTTGGTAGATGGGCAA+AGG + tig0019777:117003-117022 None:intergenic 40.0%
! CATTTTCATGCTCGCCTTTA+CGG + tig0019777:117120-117139 None:intergenic 40.0%
AATGGGAGGATTAGGAAAGG+TGG - tig0019777:114674-114693 Msa1376010:CDS 45.0%
ATGGGAGGATTAGGAAAGGT+GGG - tig0019777:114675-114694 Msa1376010:CDS 45.0%
TCCGGTCCATCATTATTCTC+TGG - tig0019777:114890-114909 Msa1376010:CDS 45.0%
! TTCTCTGGTTTGCAGTCAAG+AGG - tig0019777:114905-114924 Msa1376010:CDS 45.0%
GCATCAAGAACTTGAGCAAG+AGG + tig0019777:114944-114963 None:intergenic 45.0%
CCATGAATCATAAGTAGCGC+AGG + tig0019777:114984-115003 None:intergenic 45.0%
CCTGCGCTACTTATGATTCA+TGG - tig0019777:114981-115000 Msa1376010:intron 45.0%
CGTGACAAGAAATCAGCTTC+AGG + tig0019777:115019-115038 None:intergenic 45.0%
! GCTGATTTCTTGTCACGCAT+AGG - tig0019777:115022-115041 Msa1376010:intron 45.0%
AAGGACCTTCACAACTATGC+AGG - tig0019777:115061-115080 Msa1376010:intron 45.0%
GTCCTGAAGCTGTTCAAGAA+TGG - tig0019777:115083-115102 Msa1376010:CDS 45.0%
TGCCATTCTTGAACAGCTTC+AGG + tig0019777:115088-115107 None:intergenic 45.0%
ATCTCCTCGAACAGATAGAG+GGG + tig0019777:115161-115180 None:intergenic 45.0%
CTGAGGACCCATTTGGAAAA+AGG + tig0019777:115236-115255 None:intergenic 45.0%
! CTTTTTCCAAATGGGTCCTC+AGG - tig0019777:115234-115253 Msa1376010:CDS 45.0%
! TGCACGTTGATGAGTGGTAA+TGG + tig0019777:115436-115455 None:intergenic 45.0%
TGCAGAATGGTACAAACCAG+GGG - tig0019777:115782-115801 Msa1376010:CDS 45.0%
AATACCTGCAGCTCCATCAA+GGG + tig0019777:115823-115842 None:intergenic 45.0%
GTACGAGGACTAGAGAAGTT+TGG - tig0019777:115855-115874 Msa1376010:intron 45.0%
GAGGACTAGAGAAGTTTGGT+GGG - tig0019777:115859-115878 Msa1376010:intron 45.0%
ATTGGAGTGAAGCTGAGAAG+CGG - tig0019777:115936-115955 Msa1376010:intron 45.0%
ATTGCTCACAACAGCCTTCT+TGG + tig0019777:116047-116066 None:intergenic 45.0%
CCTCAGCATCAAATCCCAAA+TGG + tig0019777:116174-116193 None:intergenic 45.0%
! CCATTTGGGATTTGATGCTG+AGG - tig0019777:116171-116190 Msa1376010:CDS 45.0%
! TTGATGCTGAGGTGAGGTTT+TGG - tig0019777:116182-116201 Msa1376010:CDS 45.0%
GTATTCAACATCGAGTGAGC+AGG - tig0019777:116250-116269 Msa1376010:CDS 45.0%
!! GAACCATTTGAGTTGTGGGA+AGG - tig0019777:116434-116453 Msa1376010:CDS 45.0%
AGTCCTTCCCACAACTCAAA+TGG + tig0019777:116440-116459 None:intergenic 45.0%
GAAGTCCACTCACACATCAA+AGG - tig0019777:116667-116686 Msa1376010:CDS 45.0%
CACATCAAAGGTTTCTTCGG+AGG - tig0019777:116679-116698 Msa1376010:CDS 45.0%
TATGGACCAGCTATACAAGC+TGG - tig0019777:116714-116733 Msa1376010:CDS 45.0%
TCTGTACCAGCTTGTATAGC+TGG + tig0019777:116723-116742 None:intergenic 45.0%
TGGAGTTGAATGTCCAGGAA+AGG + tig0019777:116748-116767 None:intergenic 45.0%
GGAATTGGAGTTGAATGTCC+AGG + tig0019777:116753-116772 None:intergenic 45.0%
TCCAATTGCATCAAGCAGCT+GGG + tig0019777:116883-116902 None:intergenic 45.0%
TTCCAATTGCATCAAGCAGC+TGG + tig0019777:116884-116903 None:intergenic 45.0%
GTGTGAGAATTGCATCATGC+GGG + tig0019777:116916-116935 None:intergenic 45.0%
AATTGGGTAGGGTAGTGACG+TGG - tig0019777:114460-114479 Msa1376010:three_prime_UTR 50.0%
GACGTGGCTAAACTGAAGAC+AGG - tig0019777:114476-114495 Msa1376010:three_prime_UTR 50.0%
TTCATGGCATGGCATGGCAT+GGG + tig0019777:114554-114573 None:intergenic 50.0%
ATTCATGGCATGGCATGGCA+TGG + tig0019777:114555-114574 None:intergenic 50.0%
ATCGCATTCATGGCATGGCA+TGG + tig0019777:114560-114579 None:intergenic 50.0%
CCATGCCATGAATGCGATGA+GGG - tig0019777:114562-114581 Msa1376010:three_prime_UTR 50.0%
CATGCCATGAATGCGATGAG+GGG - tig0019777:114563-114582 Msa1376010:three_prime_UTR 50.0%
TACACCCCTCATCGCATTCA+TGG + tig0019777:114570-114589 None:intergenic 50.0%
TGGGAGGATTAGGAAAGGTG+GGG - tig0019777:114676-114695 Msa1376010:CDS 50.0%
GATTAGGAAAGGTGGGGTTG+TGG - tig0019777:114682-114701 Msa1376010:CDS 50.0%
! GTGATTGGGAGTGGTATTGG+TGG - tig0019777:114752-114771 Msa1376010:CDS 50.0%
ACTGAGTTGTGCAGCACTGT+TGG - tig0019777:114775-114794 Msa1376010:CDS 50.0%
TTTGCAGTCAAGAGGTCCAC+AGG - tig0019777:114913-114932 Msa1376010:CDS 50.0%
ATCATAAGTAGCGCAGGGGA+CGG + tig0019777:114978-114997 None:intergenic 50.0%
CAGGACCTGCATAGTTGTGA+AGG + tig0019777:115069-115088 None:intergenic 50.0%
TCCCTTGTCTACAGCTGCAA+TGG - tig0019777:115129-115148 Msa1376010:CDS 50.0%
GCCATTGCAGCTGTAGACAA+GGG + tig0019777:115133-115152 None:intergenic 50.0%
AGCCATTGCAGCTGTAGACA+AGG + tig0019777:115134-115153 None:intergenic 50.0%
TCTCCTCGAACAGATAGAGG+GGG + tig0019777:115160-115179 None:intergenic 50.0%
AGGTGCATATCTAGCAGCAG+CGG + tig0019777:115200-115219 None:intergenic 50.0%
GCAGAATGGTACAAACCAGG+GGG - tig0019777:115783-115802 Msa1376010:intron 50.0%
TGTCTTGAGTACCCCCTTGA+TGG - tig0019777:115807-115826 Msa1376010:intron 50.0%
ATACCTGCAGCTCCATCAAG+GGG + tig0019777:115822-115841 None:intergenic 50.0%
CAATACCTGCAGCTCCATCA+AGG + tig0019777:115824-115843 None:intergenic 50.0%
CGAGGACTAGAGAAGTTTGG+TGG - tig0019777:115858-115877 Msa1376010:intron 50.0%
! GACTAGAGAAGTTTGGTGGG+CGG - tig0019777:115862-115881 Msa1376010:intron 50.0%
GCTTCTCAGCTTCACTCCAA+TGG + tig0019777:115937-115956 None:intergenic 50.0%
GCAGTTCGTACATGCCAAGA+AGG - tig0019777:116030-116049 Msa1376010:intron 50.0%
TGGGATTTGATGCTGAGGTG+AGG - tig0019777:116176-116195 Msa1376010:CDS 50.0%
ACTCCTAATCTGGCACCTAC+TGG - tig0019777:116377-116396 Msa1376010:CDS 50.0%
CTCCTAATCTGGCACCTACT+GGG - tig0019777:116378-116397 Msa1376010:CDS 50.0%
TTCCCAGTAGGTGCCAGATT+AGG + tig0019777:116383-116402 None:intergenic 50.0%
CATTTCTCCCTGCTGAATCC+TGG + tig0019777:116630-116649 None:intergenic 50.0%
AGGTTTCTTCGGAGGAACAG+AGG - tig0019777:116687-116706 Msa1376010:CDS 50.0%
CGGAGGAACAGAGGAACATA+TGG - tig0019777:116696-116715 Msa1376010:CDS 50.0%
GCTGGTACAGATACCTTTCC+TGG - tig0019777:116732-116751 Msa1376010:CDS 50.0%
!! TGTGGAGACTCCACTTTTCC+TGG - tig0019777:116786-116805 Msa1376010:CDS 50.0%
!! GACTCCACTTTTCCTGGCAT+TGG - tig0019777:116792-116811 Msa1376010:CDS 50.0%
TCCCAGCTGCTTGATGCAAT+TGG - tig0019777:116879-116898 Msa1376010:CDS 50.0%
GCCATGCCATGAATGCGATG+AGG - tig0019777:114561-114580 Msa1376010:three_prime_UTR 55.0%
CCCTCATCGCATTCATGGCA+TGG + tig0019777:114565-114584 None:intergenic 55.0%
! GCGATGAGGGGTGTAAGTGT+TGG - tig0019777:114575-114594 Msa1376010:three_prime_UTR 55.0%
TTCGAAAGCCACGACCATGC+TGG - tig0019777:114824-114843 Msa1376010:CDS 55.0%
AATGAGCAGCACCTCCAGCA+TGG + tig0019777:114841-114860 None:intergenic 55.0%
!! TGAGCAAGAGGGTTAGCCTG+TGG + tig0019777:114932-114951 None:intergenic 55.0%
CTTCCCCCTCTATCTGTTCG+AGG - tig0019777:115154-115173 Msa1376010:CDS 55.0%
TACCTGCAGCTCCATCAAGG+GGG + tig0019777:115821-115840 None:intergenic 55.0%
CAGGGTATACGCAGCGATCT+AGG - tig0019777:116269-116288 Msa1376010:CDS 55.0%
AGAGCAGTGGAGAGAGCAGT+GGG - tig0019777:116603-116622 Msa1376010:CDS 55.0%
AGTGGGACCAGGATTCAGCA+GGG - tig0019777:116620-116639 Msa1376010:CDS 55.0%
GACGCCAATGCCAGGAAAAG+TGG + tig0019777:116799-116818 None:intergenic 55.0%
GAAAGCCACGACCATGCTGG+AGG - tig0019777:114827-114846 Msa1376010:CDS 60.0%
GAGCAGCCTGAGGACCCATT+TGG + tig0019777:115243-115262 None:intergenic 60.0%
GTGGAACGAAGAGCAGCCTG+AGG + tig0019777:115253-115272 None:intergenic 60.0%
CAGTTGCTCTCCCTTCCCTC+AGG - tig0019777:115749-115768 Msa1376010:CDS 60.0%
TACCCCCTTGATGGAGCTGC+AGG - tig0019777:115816-115835 Msa1376010:intron 60.0%
GAGAGCAGTGGAGAGAGCAG+TGG - tig0019777:116602-116621 Msa1376010:CDS 60.0%
CAGTGGGACCAGGATTCAGC+AGG - tig0019777:116619-116638 Msa1376010:CDS 60.0%
CACCACTGGCAGCAACTGCA+GGG + tig0019777:116821-116840 None:intergenic 60.0%
CAGCACCTCCAGCATGGTCG+TGG + tig0019777:114835-114854 None:intergenic 65.0%
GGGTACTCAAGACAGCCCCC+TGG + tig0019777:115801-115820 None:intergenic 65.0%
GTGGAGAGAGCAGTGGGACC+AGG - tig0019777:116609-116628 Msa1376010:CDS 65.0%
ACTGCAGGGACGCCAATGCC+AGG + tig0019777:116807-116826 None:intergenic 65.0%
GTCCCTGCAGTTGCTGCCAG+TGG - tig0019777:116816-116835 Msa1376010:CDS 65.0%
GCACCACTGGCAGCAACTGC+AGG + tig0019777:116822-116841 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0019777 gene 114409 117163 114409 ID=Msa1376010;Name=Msa1376010
tig0019777 mRNA 114409 117163 114409 ID=Msa1376010-mRNA-1;Parent=Msa1376010;Name=Msa1376010-mRNA-1;_AED=0.09;_eAED=0.09;_QI=145|1|1|1|1|1|5|255|584
tig0019777 exon 114409 114978 114409 ID=Msa1376010-mRNA-1:exon:4894;Parent=Msa1376010-mRNA-1
tig0019777 exon 115064 115300 115064 ID=Msa1376010-mRNA-1:exon:4893;Parent=Msa1376010-mRNA-1
tig0019777 exon 115380 115538 115380 ID=Msa1376010-mRNA-1:exon:4892;Parent=Msa1376010-mRNA-1
tig0019777 exon 115610 115801 115610 ID=Msa1376010-mRNA-1:exon:4891;Parent=Msa1376010-mRNA-1
tig0019777 exon 116167 117163 116167 ID=Msa1376010-mRNA-1:exon:4890;Parent=Msa1376010-mRNA-1
tig0019777 five_prime_UTR 117019 117163 117019 ID=Msa1376010-mRNA-1:five_prime_utr;Parent=Msa1376010-mRNA-1
tig0019777 CDS 116167 117018 116167 ID=Msa1376010-mRNA-1:cds;Parent=Msa1376010-mRNA-1
tig0019777 CDS 115610 115801 115610 ID=Msa1376010-mRNA-1:cds;Parent=Msa1376010-mRNA-1
tig0019777 CDS 115380 115538 115380 ID=Msa1376010-mRNA-1:cds;Parent=Msa1376010-mRNA-1
tig0019777 CDS 115064 115300 115064 ID=Msa1376010-mRNA-1:cds;Parent=Msa1376010-mRNA-1
tig0019777 CDS 114664 114978 114664 ID=Msa1376010-mRNA-1:cds;Parent=Msa1376010-mRNA-1
tig0019777 three_prime_UTR 114409 114663 114409 ID=Msa1376010-mRNA-1:three_prime_utr;Parent=Msa1376010-mRNA-1
Gene Sequence

>Msa1376010

ATGCCATGCCATGCCATGAATGCGATGAGGGGTGTAAGTGTTGGTGTGTTTCCTTGTAATGTAATGAGAGTGAGAAGATACTGTTCAAGAATTGATGATGATCATCATCATAGTCATAGTAATGGGAGGATTAGGAAAGGTGGGGTTGTGGTGCGAAACAGCAGCAACAAAGTAGATGAAACAGAAACAGATGTAATTGTGATTGGGAGTGGTATTGGTGGACTGAGTTGTGCAGCACTGTTGGCAAGATATGAACAAGATGTTGTCGTTTTCGAAAGCCACGACCATGCTGGAGGTGCTGCTCATTCTTTTGATGTCAAAGGCTATAAGTTTGATTCCGGTCCATCATTATTCTCTGGTTTGCAGTCAAGAGGTCCACAGGCTAACCCTCTTGCTCAAGTTCTTGATGCTTTGGGAGAGTCCGTCCCCTGCGCTACTTATGATTCATGGATGGTCCATGTACCTGAAGCTGATTTCTTGTCACGCATAGGTCCTACTGAGTTTTTAAAGGACCTTCACAACTATGCAGGTCCTGAAGCTGTTCAAGAATGGCAGAAGCTTTTGGATGCTGTACTTCCCTTGTCTACAGCTGCAATGGCTCTTCCCCCTCTATCTGTTCGAGGAGATTTCGGTGTTCTTTACACCGCTGCTGCTAGATATGCACCTTCTCTTTTCAATACCTTTTTCCAAATGGGTCCTCAGGCTGCTCTTCGTTCCACACAACTTCTCTCACCTTTTTCCCAAATACTTGACTCTTTGCAACTAAAGAATCCTTTCATACGCAATTGGATTGACTTACTTTCTTTCTTGCTTGCTGGTGTCAAATCTGATAGTATATTGTCTGCAGAGATGGTTTACATGTTTGCAGAATGGTACAAACCAGGGGGCTGTCTTGAGTACCCCCTTGATGGAGCTGCAGGTATTGTTGATGCTCTTGTACGAGGACTAGAGAAGTTTGGTGGGCGGATTTCTCTTCAAAGTCACGTGGAAAAGATTGTTGTTGAAAATGACAGAGCCATTGGAGTGAAGCTGAGAAGCGGCCAATTCGTACATGCCAAGAAGGCTGTTGTGAGCAATGCATCAATGTGGGATACTTTAAAATTGCTCCCTCAAGAAGTTGTTCCAAAGTCTTACTCAAATAGGATTAACACGACTAGTCAGTGTGAATCTTTCATGCATCTCCATTTGGGATTTGATGCTGAGGGTATACGCAGCGATCTAGGAATTCATCATATAGTTGTAAATGATTGGGAAAGAGGAGTTGACGCAGATCAGAATGTTGTGTTGATATCAGTTCCTAGTGTACTTACTCCTAATCTGGCACCTACTGGGAAACATGTGTTACATGCTTATCTTCCAGGAACTGAACCATTTGAGTTGTGGGAAGGACTTGATCGTAAGAGTGCCGAATACAGAAATCTTAAAGCTCAAAGATCAGAGATAATGTGGAGAGCAGTGGAGAGAGCAGTGGGACCAGGATTCAGCAGGGAGAAATGTGAAGTGAAGTTAGTTGGAAGTCCACTCACACATCAAAGGTTTCTTCGGAGGAACAGAGGAACATATGGACCAGCTATACAAGCTGGTACAGATACCTTTCCTGGACATTCAACTCCAATTCCACACCTTTATTGTTGTGGAGACTCCACTTTTCCTGGCATTGGCGTCCCTGCAGTTGCTGCCAGTGGTGCAATTGTAGCTAATTCTCTAGTTTCAGTGTCTCAGCATTCCCAGCTGCTTGATGCAATTGGAATTTGA

Protein sequence

>Msa1376010

MPCHAMNAMRGVSVGVFPCNVMRVRRYCSRIDDDHHHSHSNGRIRKGGVVVRNSSNKVDETETDVIVIGSGIGGLSCAALLARYEQDVVVFESHDHAGGAAHSFDVKGYKFDSGPSLFSGLQSRGPQANPLAQVLDALGESVPCATYDSWMVHVPEADFLSRIGPTEFLKDLHNYAGPEAVQEWQKLLDAVLPLSTAAMALPPLSVRGDFGVLYTAAARYAPSLFNTFFQMGPQAALRSTQLLSPFSQILDSLQLKNPFIRNWIDLLSFLLAGVKSDSILSAEMVYMFAEWYKPGGCLEYPLDGAAGIVDALVRGLEKFGGRISLQSHVEKIVVENDRAIGVKLRSGQFVHAKKAVVSNASMWDTLKLLPQEVVPKSYSNRINTTSQCESFMHLHLGFDAEGIRSDLGIHHIVVNDWERGVDADQNVVLISVPSVLTPNLAPTGKHVLHAYLPGTEPFELWEGLDRKSAEYRNLKAQRSEIMWRAVERAVGPGFSREKCEVKLVGSPLTHQRFLRRNRGTYGPAIQAGTDTFPGHSTPIPHLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSQLLDAIGI*