AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0072390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072390 MtrunA17_Chr1g0179231 98.624 218 3 0 1 218 1 218 5.85e-160 441
Msa0072390 MtrunA17_Chr1g0179681 35.294 153 85 7 32 178 87 231 1.82e-15 73.2
Msa0072390 MtrunA17_Chr3g0102841 31.056 161 88 4 61 215 61 204 1.41e-14 69.7
Msa0072390 MtrunA17_Chr7g0214751 29.208 202 120 6 26 213 43 235 4.26e-13 66.2
Msa0072390 MtrunA17_Chr7g0234801 33.588 131 78 3 49 178 5 127 9.87e-13 66.6
Msa0072390 MtrunA17_Chr8g0377771 35.669 157 80 9 61 211 23 164 2.02e-12 65.9
Msa0072390 MtrunA17_Chr8g0392891 32.031 128 72 4 59 177 117 238 7.74e-12 62.8
Msa0072390 MtrunA17_Chr5g0396231 35.537 121 45 3 96 216 413 500 8.79e-12 63.9
Msa0072390 MtrunA17_Chr8g0335211 33.594 128 68 5 79 204 100 212 1.45e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072390 AT4G19830.1 71.505 186 42 1 32 217 52 226 2.08e-91 268
Msa0072390 AT4G26555.2 33.750 160 86 5 55 213 18 158 1.86e-18 79.3
Msa0072390 AT4G26555.1 33.750 160 86 5 55 213 64 204 2.16e-18 80.5
Msa0072390 AT5G48570.1 34.000 150 65 4 68 216 37 153 1.73e-14 72.0
Msa0072390 AT3G10060.1 36.975 119 66 4 63 178 92 204 1.94e-14 70.1
Msa0072390 AT5G13410.1 32.903 155 91 5 64 213 105 251 7.55e-14 68.9
Msa0072390 AT3G25230.1 40.196 102 51 4 79 178 39 132 7.06e-13 67.4
Msa0072390 AT3G25230.2 40.196 102 51 4 79 178 39 132 8.84e-13 67.0
Msa0072390 AT5G05420.1 30.137 146 67 4 73 216 31 143 1.82e-12 63.2
Msa0072390 AT3G60370.1 31.298 131 57 4 87 217 129 226 9.38e-12 62.8
Msa0072390 AT3G60370.2 31.298 131 57 4 87 217 158 255 1.11e-11 63.2
Msa0072390 AT1G18170.1 34.884 129 73 4 59 178 104 230 1.34e-11 62.4

Find 68 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAATGAAATTTATATTTA+AGG 0.075803 1_2:-45286587 Msa0072390:three_prime_UTR
AATGGTGAAGGTTCGACTTT+AGG 0.241757 1_2:-45286779 Msa0072390:CDS
TTCTCTGAACTCCCCAATTC+TGG 0.241954 1_2:-45288079 Msa0072390:CDS
TTTGTCTTTGTCCTTGGTTC+TGG 0.255718 1_2:-45287651 Msa0072390:CDS
AAAGTTTAAGTATCAATGTT+AGG 0.267247 1_2:-45288326 None:intergenic
TTGGAACTCCTTGTTGGTTC+AGG 0.280949 1_2:-45288043 Msa0072390:CDS
ATGGTGAAGGTTCGACTTTA+GGG 0.294637 1_2:-45286778 Msa0072390:CDS
GGCCTTAACACCACCAGAAT+TGG 0.297767 1_2:+45288066 None:intergenic
GTGTTTGTTTGTTTACTATA+TGG 0.326956 1_2:+45286694 None:intergenic
TTTATCAATTTGTGAATTGC+AGG 0.338768 1_2:-45286617 Msa0072390:three_prime_UTR
TTCTGGTGGTGTTAAGGCCT+TGG 0.355031 1_2:-45288062 Msa0072390:CDS
ATTCTCATCTTTGTGGTCAT+AGG 0.366810 1_2:+45287689 None:intergenic
GCCTTAACACCACCAGAATT+GGG 0.386314 1_2:+45288067 None:intergenic
CCCCAATTCTGGTGGTGTTA+AGG 0.386678 1_2:-45288068 Msa0072390:CDS
TGCTGTGTTCAGGTAATTGC+TGG 0.390936 1_2:-45287177 Msa0072390:intron
AGAAGGTGAAGGAGAAGAAT+AGG 0.395312 1_2:+45288123 None:intergenic
TTGTTTGTTTACTATATGGC+TGG 0.409883 1_2:+45286698 None:intergenic
CTTTGTCCTTGGTTCTGGTA+AGG 0.410071 1_2:-45287646 Msa0072390:intron
ACTTATATTTGATATTGAAC+TGG 0.414468 1_2:-45286753 Msa0072390:CDS
ATAATAAAATACTGTGTCCT+TGG 0.418797 1_2:-45288277 Msa0072390:CDS
GGTCTTCTTGTTATGTTACA+TGG 0.420319 1_2:+45288211 None:intergenic
GATCACCATTCTCATCTTTG+TGG 0.422175 1_2:+45287682 None:intergenic
AAGGCCTTGGAACTCCTTGT+TGG 0.425790 1_2:-45288049 Msa0072390:CDS
AGTTCAGAGAAATCTGCTAT+TGG 0.443056 1_2:+45288091 None:intergenic
AGGACAAAGACAAAAGGATT+AGG 0.454496 1_2:+45287660 None:intergenic
GAGATTAGAGACAGAGATAA+GGG 0.454626 1_2:+45288190 None:intergenic
AAGGTTGAGATTCATTACTA+TGG 0.463418 1_2:-45287750 Msa0072390:CDS
GAAGAATAGGAAGGTGGAAG+AGG 0.466133 1_2:+45288136 None:intergenic
AAGTTTAAGTATCAATGTTA+GGG 0.469362 1_2:-45288325 None:intergenic
TTTCTTACATTAGGCGGGAT+AGG 0.475564 1_2:+45287063 None:intergenic
AATCCGACTCGACTTGCAAA+TGG 0.488064 1_2:-45286797 Msa0072390:CDS
GTCATCATACCTCCCTCACT+TGG 0.492147 1_2:-45287108 Msa0072390:CDS
AAAAGTTCTTTGACAGGCAG+AGG 0.497439 1_2:-45286838 Msa0072390:intron
ATTCACAAATTGATAAATGC+TGG 0.499046 1_2:+45286623 None:intergenic
GGAGATTAGAGACAGAGATA+AGG 0.501803 1_2:+45288189 None:intergenic
AAATCGAGCAATATACTACC+TGG 0.512956 1_2:+45286561 None:intergenic
AAGGATTTCTTACATTAGGC+GGG 0.525661 1_2:+45287058 None:intergenic
ATATTTGATATTGAACTGGT+TGG 0.533481 1_2:-45286749 Msa0072390:CDS
AAAGGATTTCTTACATTAGG+CGG 0.534022 1_2:+45287057 None:intergenic
GATTAAAGCAGAGAAAGTAG+TGG 0.540679 1_2:+45288168 None:intergenic
GAACCAAGGACAAAGACAAA+AGG 0.544303 1_2:+45287654 None:intergenic
TCAGGTGAAGTTCCTCAAGA+TGG 0.562507 1_2:-45288025 Msa0072390:CDS
TCTGAACTCCCCAATTCTGG+TGG 0.572089 1_2:-45288076 Msa0072390:CDS
TATGACCACAAAGATGAGAA+TGG 0.579877 1_2:-45287687 Msa0072390:CDS
GAAGGAGAAGAATAGGAAGG+TGG 0.580002 1_2:+45288130 None:intergenic
GGTAGACTTGCAGCAAAACA+AGG 0.581972 1_2:-45287729 Msa0072390:CDS
GGTGAAGGAGAAGAATAGGA+AGG 0.585572 1_2:+45288127 None:intergenic
ACACACGTGTTGCACTTCCA+AGG 0.590396 1_2:+45288260 None:intergenic
TCACCATTTGCAAGTCGAGT+CGG 0.591167 1_2:+45286794 None:intergenic
ACTCGACTTGCAAATGGTGA+AGG 0.607106 1_2:-45286791 Msa0072390:CDS
GACTTGCAGCAAAACAAGGA+TGG 0.607232 1_2:-45287725 Msa0072390:CDS
TATACCTGGTCTCCATCTTG+AGG 0.616605 1_2:+45288013 None:intergenic
TTCTGATACCCAAGTGAGGG+AGG 0.616633 1_2:+45287099 None:intergenic
TCATCATACCTCCCTCACTT+GGG 0.617977 1_2:-45287107 Msa0072390:CDS
TGAACCAACAAGGAGTTCCA+AGG 0.619826 1_2:+45288045 None:intergenic
CCTTAACACCACCAGAATTG+GGG 0.629737 1_2:+45288068 None:intergenic
ATATTGAACTGGTTGGTCTG+AGG 0.637937 1_2:-45286742 Msa0072390:CDS
AATCGAGCAATATACTACCT+GGG 0.638861 1_2:+45286562 None:intergenic
AATTTATATTTAAGGAACCC+AGG 0.642409 1_2:-45286579 Msa0072390:three_prime_UTR
TGGGTATCAGAACACATCAC+AGG 0.647520 1_2:-45287088 Msa0072390:CDS
GAACTTCACCTGAACCAACA+AGG 0.650571 1_2:+45288035 None:intergenic
AGTTCCTCAAGATGGAGACC+AGG 0.651081 1_2:-45288017 Msa0072390:intron
GTGAGATCAATGAAAGTCGG+TGG 0.665800 1_2:-45287141 Msa0072390:CDS
AGCTTACCTTACCAGAACCA+AGG 0.667313 1_2:+45287640 None:intergenic
GGTAATTGCTGGAATTGATG+TGG 0.679818 1_2:-45287166 Msa0072390:CDS
GTGTTCTGATACCCAAGTGA+GGG 0.691969 1_2:+45287096 None:intergenic
GCAGTGAGATCAATGAAAGT+CGG 0.693946 1_2:-45287144 Msa0072390:CDS
TGTGTTCTGATACCCAAGTG+AGG 0.735364 1_2:+45287095 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACATTAGCATTAATTTAA+AGG + chr1_2:45286893-45286912 None:intergenic 15.0%
!!! TTATAGATAATTTAATGGAT+AGG - chr1_2:45287019-45287038 Msa0072390:intron 15.0%
!! AAAAATTTCAGACTTATATA+TGG - chr1_2:45287587-45287606 Msa0072390:intron 15.0%
!! TATACATTATCTAAATTGAT+AGG - chr1_2:45287892-45287911 Msa0072390:intron 15.0%
!!! AACCATATATTCTAAAATGA+TGG + chr1_2:45286932-45286951 None:intergenic 20.0%
!! AAAACAAAACATGTTTATCA+AGG + chr1_2:45286960-45286979 None:intergenic 20.0%
!! TTGATTATAACCAGTAAATT+TGG - chr1_2:45287255-45287274 Msa0072390:intron 20.0%
!!! CAAACTTATTTTGATCATTT+GGG + chr1_2:45287421-45287440 None:intergenic 20.0%
!!! ACAAACTTATTTTGATCATT+TGG + chr1_2:45287422-45287441 None:intergenic 20.0%
!! ATAAAAGGATTTCTTACATT+AGG + chr1_2:45287822-45287841 None:intergenic 20.0%
!!! ACATATATATTCTCTAGTTT+TGG - chr1_2:45287945-45287964 Msa0072390:intron 20.0%
!! AAAAAAAAAAGTTCTTTGAC+AGG - chr1_2:45288029-45288048 Msa0072390:CDS 20.0%
!! ACTTATATTTGATATTGAAC+TGG - chr1_2:45288120-45288139 Msa0072390:CDS 20.0%
!!! AAACACTTTCTTTTTTATGA+GGG - chr1_2:45288196-45288215 Msa0072390:CDS 20.0%
! ATAATAAAATACTGTGTCCT+TGG - chr1_2:45286596-45286615 Msa0072390:three_prime_UTR 25.0%
!!! TGCCATCATTTTAGAATATA+TGG - chr1_2:45286927-45286946 Msa0072390:intron 25.0%
!! GATAATTTAATGGATAGGTA+AGG - chr1_2:45287024-45287043 Msa0072390:intron 25.0%
! AGTAAATGTTGTTACATTGA+AGG - chr1_2:45287104-45287123 Msa0072390:CDS 25.0%
! TATAACCAGTAAATTTGGTT+TGG - chr1_2:45287260-45287279 Msa0072390:intron 25.0%
!!! CATACTAAGTTTTTTCCATA+AGG - chr1_2:45287559-45287578 Msa0072390:intron 25.0%
!! TGAAATTTTTACTGTCCTTA+TGG + chr1_2:45287577-45287596 None:intergenic 25.0%
! ATGTAATTCTGGATCATAAA+AGG + chr1_2:45287837-45287856 None:intergenic 25.0%
! ATATTTGATATTGAACTGGT+TGG - chr1_2:45288124-45288143 Msa0072390:CDS 25.0%
! GTGTTTGTTTGTTTACTATA+TGG + chr1_2:45288182-45288201 None:intergenic 25.0%
!!! CAAACACTTTCTTTTTTATG+AGG - chr1_2:45288195-45288214 Msa0072390:CDS 25.0%
!!! AACACTTTCTTTTTTATGAG+GGG - chr1_2:45288197-45288216 Msa0072390:CDS 25.0%
! ATTCACAAATTGATAAATGC+TGG + chr1_2:45288253-45288272 None:intergenic 25.0%
! TTTATCAATTTGTGAATTGC+AGG - chr1_2:45288256-45288275 Msa0072390:CDS 25.0%
! AATTTATATTTAAGGAACCC+AGG - chr1_2:45288294-45288313 Msa0072390:exon 25.0%
! TACATGGATATTTTGTGTGA+GGG + chr1_2:45286649-45286668 None:intergenic 30.0%
! TTACATGGATATTTTGTGTG+AGG + chr1_2:45286650-45286669 None:intergenic 30.0%
TTAAAGGAGAGAATTATACC+TGG + chr1_2:45286877-45286896 None:intergenic 30.0%
!!! CATGTTTTGTTTTGCTTTGT+TGG - chr1_2:45286967-45286986 Msa0072390:intron 30.0%
AAGGTTGAGATTCATTACTA+TGG - chr1_2:45287123-45287142 Msa0072390:CDS 30.0%
AAACACCAAACCAAATTTAC+TGG + chr1_2:45287268-45287287 None:intergenic 30.0%
CAGACTTATATATGGATCTT+TGG - chr1_2:45287595-45287614 Msa0072390:intron 30.0%
CTTAGTATGCAACATGATAA+AGG + chr1_2:45287649-45287668 None:intergenic 30.0%
AGAAGTTAATCTTGTGAGAA+TGG - chr1_2:45287671-45287690 Msa0072390:CDS 30.0%
AAAGGATTTCTTACATTAGG+CGG + chr1_2:45287819-45287838 None:intergenic 30.0%
CAAACGTAACTATGTAATTC+TGG + chr1_2:45287848-45287867 None:intergenic 30.0%
TTGTTTGTTTACTATATGGC+TGG + chr1_2:45288178-45288197 None:intergenic 30.0%
! GGTCTTCTTGTTATGTTACA+TGG + chr1_2:45286665-45286684 None:intergenic 35.0%
GAGATTAGAGACAGAGATAA+GGG + chr1_2:45286686-45286705 None:intergenic 35.0%
GATTAAAGCAGAGAAAGTAG+TGG + chr1_2:45286708-45286727 None:intergenic 35.0%
AGTTCAGAGAAATCTGCTAT+TGG + chr1_2:45286785-45286804 None:intergenic 35.0%
GGTAGAGTATGAGAATTTGT+AGG - chr1_2:45286988-45287007 Msa0072390:intron 35.0%
ATTCTCATCTTTGTGGTCAT+AGG + chr1_2:45287187-45287206 None:intergenic 35.0%
TATGACCACAAAGATGAGAA+TGG - chr1_2:45287186-45287205 Msa0072390:intron 35.0%
AGGACAAAGACAAAAGGATT+AGG + chr1_2:45287216-45287235 None:intergenic 35.0%
! AATCCTTTTGTCTTTGTCCT+TGG - chr1_2:45287216-45287235 Msa0072390:intron 35.0%
! CTTAATTGCTTCTTGAGTTG+TGG + chr1_2:45287495-45287514 None:intergenic 35.0%
GAAGCAATTAAGCATCAATG+TGG - chr1_2:45287503-45287522 Msa0072390:intron 35.0%
! ATGCAACATGATAAAGGCAT+AGG + chr1_2:45287643-45287662 None:intergenic 35.0%
AAGGATTTCTTACATTAGGC+GGG + chr1_2:45287818-45287837 None:intergenic 35.0%
AAGTCGAGTCGGATTAAAAA+TGG + chr1_2:45288071-45288090 None:intergenic 35.0%
!!! ACTTTCTTTTTTATGAGGGG+TGG - chr1_2:45288200-45288219 Msa0072390:CDS 35.0%
AATCGAGCAATATACTACCT+GGG + chr1_2:45288314-45288333 None:intergenic 35.0%
AAATCGAGCAATATACTACC+TGG + chr1_2:45288315-45288334 None:intergenic 35.0%
! ATATTTTGTGTGAGGGAGAG+TGG + chr1_2:45286642-45286661 None:intergenic 40.0%
GGAGATTAGAGACAGAGATA+AGG + chr1_2:45286687-45286706 None:intergenic 40.0%
AGAAGGTGAAGGAGAAGAAT+AGG + chr1_2:45286753-45286772 None:intergenic 40.0%
!!! GCTATTGGACGTTTTGAAGA+AGG + chr1_2:45286770-45286789 None:intergenic 40.0%
GATCACCATTCTCATCTTTG+TGG + chr1_2:45287194-45287213 None:intergenic 40.0%
GAACCAAGGACAAAGACAAA+AGG + chr1_2:45287222-45287241 None:intergenic 40.0%
TTTGTCTTTGTCCTTGGTTC+TGG - chr1_2:45287222-45287241 Msa0072390:intron 40.0%
GGTAATTGCTGGAATTGATG+TGG - chr1_2:45287707-45287726 Msa0072390:CDS 40.0%
GCAGTGAGATCAATGAAAGT+CGG - chr1_2:45287729-45287748 Msa0072390:CDS 40.0%
TTTCTTACATTAGGCGGGAT+AGG + chr1_2:45287813-45287832 None:intergenic 40.0%
AAAAGTTCTTTGACAGGCAG+AGG - chr1_2:45288035-45288054 Msa0072390:CDS 40.0%
AATGGTGAAGGTTCGACTTT+AGG - chr1_2:45288094-45288113 Msa0072390:CDS 40.0%
ATGGTGAAGGTTCGACTTTA+GGG - chr1_2:45288095-45288114 Msa0072390:CDS 40.0%
!! ATATTGAACTGGTTGGTCTG+AGG - chr1_2:45288131-45288150 Msa0072390:CDS 40.0%
GAAGAATAGGAAGGTGGAAG+AGG + chr1_2:45286740-45286759 None:intergenic 45.0%
GAAGGAGAAGAATAGGAAGG+TGG + chr1_2:45286746-45286765 None:intergenic 45.0%
GGTGAAGGAGAAGAATAGGA+AGG + chr1_2:45286749-45286768 None:intergenic 45.0%
!!! GGACGTTTTGAAGAAGGTGA+AGG + chr1_2:45286764-45286783 None:intergenic 45.0%
TTCTCTGAACTCCCCAATTC+TGG - chr1_2:45286794-45286813 Msa0072390:CDS 45.0%
CCTTAACACCACCAGAATTG+GGG + chr1_2:45286808-45286827 None:intergenic 45.0%
GCCTTAACACCACCAGAATT+GGG + chr1_2:45286809-45286828 None:intergenic 45.0%
TGAACCAACAAGGAGTTCCA+AGG + chr1_2:45286831-45286850 None:intergenic 45.0%
!! TTGGAACTCCTTGTTGGTTC+AGG - chr1_2:45286830-45286849 Msa0072390:CDS 45.0%
GAACTTCACCTGAACCAACA+AGG + chr1_2:45286841-45286860 None:intergenic 45.0%
TCAGGTGAAGTTCCTCAAGA+TGG - chr1_2:45286848-45286867 Msa0072390:intron 45.0%
TATACCTGGTCTCCATCTTG+AGG + chr1_2:45286863-45286882 None:intergenic 45.0%
GGTAGACTTGCAGCAAAACA+AGG - chr1_2:45287144-45287163 Msa0072390:CDS 45.0%
GACTTGCAGCAAAACAAGGA+TGG - chr1_2:45287148-45287167 Msa0072390:CDS 45.0%
!! CTTTGTCCTTGGTTCTGGTA+AGG - chr1_2:45287227-45287246 Msa0072390:intron 45.0%
AGCTTACCTTACCAGAACCA+AGG + chr1_2:45287236-45287255 None:intergenic 45.0%
!! GAGAATGGATTGCTGTGTTC+AGG - chr1_2:45287686-45287705 Msa0072390:CDS 45.0%
TGCTGTGTTCAGGTAATTGC+TGG - chr1_2:45287696-45287715 Msa0072390:CDS 45.0%
GTGAGATCAATGAAAGTCGG+TGG - chr1_2:45287732-45287751 Msa0072390:CDS 45.0%
TCATCATACCTCCCTCACTT+GGG - chr1_2:45287766-45287785 Msa0072390:intron 45.0%
GTGTTCTGATACCCAAGTGA+GGG + chr1_2:45287780-45287799 None:intergenic 45.0%
TGTGTTCTGATACCCAAGTG+AGG + chr1_2:45287781-45287800 None:intergenic 45.0%
TGGGTATCAGAACACATCAC+AGG - chr1_2:45287785-45287804 Msa0072390:intron 45.0%
! AATCCGACTCGACTTGCAAA+TGG - chr1_2:45288076-45288095 Msa0072390:CDS 45.0%
TCACCATTTGCAAGTCGAGT+CGG + chr1_2:45288082-45288101 None:intergenic 45.0%
! ACTCGACTTGCAAATGGTGA+AGG - chr1_2:45288082-45288101 Msa0072390:CDS 45.0%
!! TTTATTTATAGATAATTTAA+TGG - chr1_2:45287014-45287033 Msa0072390:intron 5.0%
!! ATTAATGAAATTTATATTTA+AGG - chr1_2:45288286-45288305 Msa0072390:CDS 5.0%
ACACACGTGTTGCACTTCCA+AGG + chr1_2:45286616-45286635 None:intergenic 50.0%
TCTGAACTCCCCAATTCTGG+TGG - chr1_2:45286797-45286816 Msa0072390:CDS 50.0%
! CCCCAATTCTGGTGGTGTTA+AGG - chr1_2:45286805-45286824 Msa0072390:CDS 50.0%
GGCCTTAACACCACCAGAAT+TGG + chr1_2:45286810-45286829 None:intergenic 50.0%
! TTCTGGTGGTGTTAAGGCCT+TGG - chr1_2:45286811-45286830 Msa0072390:CDS 50.0%
AAGGCCTTGGAACTCCTTGT+TGG - chr1_2:45286824-45286843 Msa0072390:CDS 50.0%
AGTTCCTCAAGATGGAGACC+AGG - chr1_2:45286856-45286875 Msa0072390:intron 50.0%
GTCATCATACCTCCCTCACT+TGG - chr1_2:45287765-45287784 Msa0072390:intron 50.0%
TTCTGATACCCAAGTGAGGG+AGG + chr1_2:45287777-45287796 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 45286558 45288337 45286558 ID=Msa0072390;Name=Msa0072390
chr1_2 mRNA 45286558 45288337 45286558 ID=Msa0072390-mRNA-1;Parent=Msa0072390;Name=Msa0072390-mRNA-1;_AED=0.01;_eAED=0.01;_QI=26|1|1|1|0.66|0.75|4|175|218
chr1_2 exon 45286558 45286855 45286558 ID=Msa0072390-mRNA-1:exon:13624;Parent=Msa0072390-mRNA-1
chr1_2 exon 45287071 45287187 45287071 ID=Msa0072390-mRNA-1:exon:13623;Parent=Msa0072390-mRNA-1
chr1_2 exon 45287647 45287769 45287647 ID=Msa0072390-mRNA-1:exon:13622;Parent=Msa0072390-mRNA-1
chr1_2 exon 45288018 45288337 45288018 ID=Msa0072390-mRNA-1:exon:13621;Parent=Msa0072390-mRNA-1
chr1_2 five_prime_UTR 45288312 45288337 45288312 ID=Msa0072390-mRNA-1:five_prime_utr;Parent=Msa0072390-mRNA-1
chr1_2 CDS 45288018 45288311 45288018 ID=Msa0072390-mRNA-1:cds;Parent=Msa0072390-mRNA-1
chr1_2 CDS 45287647 45287769 45287647 ID=Msa0072390-mRNA-1:cds;Parent=Msa0072390-mRNA-1
chr1_2 CDS 45287071 45287187 45287071 ID=Msa0072390-mRNA-1:cds;Parent=Msa0072390-mRNA-1
chr1_2 CDS 45286733 45286855 45286733 ID=Msa0072390-mRNA-1:cds;Parent=Msa0072390-mRNA-1
chr1_2 three_prime_UTR 45286558 45286732 45286558 ID=Msa0072390-mRNA-1:three_prime_utr;Parent=Msa0072390-mRNA-1
Gene Sequence

>Msa0072390

ATGAAGATGAAGATAATAAAATACTGTGTCCTTGGAAGTGCAACACGTGTGTGTGCCACTCTCCCTCACACAAAATATCCATGTAACATAACAAGAAGACCCTTATCTCTGTCTCTAATCTCCACTACTTTCTCTGCTTTAATCTTCTCACTTCCTCTTCCACCTTCCTATTCTTCTCCTTCACCTTCTTCAAAACGTCCAATAGCAGATTTCTCTGAACTCCCCAATTCTGGTGGTGTTAAGGCCTTGGAACTCCTTGTTGGTTCAGGTGAAGTTCCTCAAGATGGAGACCAGGTTGAGATTCATTACTATGGTAGACTTGCAGCAAAACAAGGATGGCGTTTTGATTCAACCTATGACCACAAAGATGAGAATGGTGATCCTAATCCTTTTGTCTTTGTCCTTGGTTCTGGTAAGGTAATTGCTGGAATTGATGTGGCAGTGAGATCAATGAAAGTCGGTGGTATTCGCAGAGTCATCATACCTCCCTCACTTGGGTATCAGAACACATCACAGGAACCTATCCCGCCTAATTTCTTTGACAGGCAGAGGCTGTTCACTACCATTTTTAATCCGACTCGACTTGCAAATGGTGAAGGTTCGACTTTAGGGACACTTATATTTGATATTGAACTGGTTGGTCTGAGGCATCAATGA

Protein sequence

>Msa0072390

MKMKIIKYCVLGSATRVCATLPHTKYPCNITRRPLSLSLISTTFSALIFSLPLPPSYSSPSPSSKRPIADFSELPNSGGVKALELLVGSGEVPQDGDQVEIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGSGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVGLRHQ*