AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1436660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1436660 MtrunA17_Chr0c12g0493641 98.973 584 6 0 1 584 1 584 0.0 1196
Msa1436660 MtrunA17_Chr4g0077041 82.156 269 6 1 287 555 1 227 1.49e-157 450
Msa1436660 MtrunA17_Chr4g0077021 97.297 111 3 0 1 111 1 111 1.18e-72 228
Msa1436660 MtrunA17_Chr1g0176461 31.681 565 319 21 38 571 42 570 3.29e-63 218
Msa1436660 MtrunA17_Chr4g0077031 100.000 70 0 0 152 221 3 72 2.26e-41 145
Msa1436660 MtrunA17_Chr8g0373291 24.744 586 325 29 45 555 4 548 1.60e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1436660 AT1G57770.1 80.952 525 100 0 60 584 50 574 0.0 900
Msa1436660 AT1G06820.1 31.758 529 310 16 60 571 75 569 3.00e-65 224
Msa1436660 AT1G06820.3 31.758 529 310 16 60 571 75 569 4.79e-65 223
Msa1436660 AT1G06820.4 34.181 354 216 9 224 571 108 450 7.56e-53 187
Msa1436660 AT1G06820.2 29.501 461 276 15 60 504 75 502 1.90e-44 166
Msa1436660 AT5G49555.1 22.968 566 343 25 52 555 3 537 8.31e-14 74.7

Find 172 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCAAAGAGTCAAGTATT+TGG 0.236602 tig0028018:+16837 None:intergenic
ATTGCTCACAACAGCCTTCT+TGG 0.241353 tig0028018:+16087 None:intergenic
TGCTCAAGTTCTTGATGCTT+TGG 0.242947 tig0028018:-17185 Msa1436660:CDS
GATATTGAAAGAAAGGAAAT+TGG 0.252127 tig0028018:-17688 Msa1436660:five_prime_UTR
CACCAACATAATATTTGATT+TGG 0.272437 tig0028018:-17612 Msa1436660:five_prime_UTR
TCAAGAATGGCAGAAGCTTT+TGG 0.272982 tig0028018:-17035 Msa1436660:CDS
TTACTTTCTTTCTTGCTTGC+TGG 0.273947 tig0028018:-16782 Msa1436660:CDS
TGCCATTCTTGAACAGCTTC+AGG 0.275584 tig0028018:+17046 None:intergenic
GAGTCAAGTATTTGGGAAAA+AGG 0.286218 tig0028018:+16845 None:intergenic
GCTCAAGTTCTTGATGCTTT+GGG 0.288521 tig0028018:-17184 Msa1436660:CDS
ATAATATTTGATTTGGTGTT+TGG 0.296031 tig0028018:-17605 Msa1436660:five_prime_UTR
TTCCAAAGTCTTACTCAAAT+AGG 0.312564 tig0028018:-16021 Msa1436660:CDS
ATCATATAGTTGTAAATGAT+TGG 0.312848 tig0028018:-15834 Msa1436660:CDS
AACTCAAATGGTTCAGTTCC+TGG 0.320765 tig0028018:+15706 None:intergenic
ATCTTTCATGCATCTCCATT+TGG 0.323021 tig0028018:-15975 Msa1436660:CDS
CTGAGGACCCATTTGGAAAA+AGG 0.326579 tig0028018:+16898 None:intergenic
AGTTTCTAATACTTGGTAGA+TGG 0.333039 tig0028018:+15124 None:intergenic
GCTGGTACAGATACCTTTCC+TGG 0.338263 tig0028018:-15399 Msa1436660:CDS
TTGCAAAGAGTCAAGTATTT+GGG 0.338675 tig0028018:+16838 None:intergenic
AGCTTTAAGATTTCTGTATT+CGG 0.338946 tig0028018:+15657 None:intergenic
CTATCTGTTCGAGGAGATTT+CGG 0.340613 tig0028018:-16968 Msa1436660:CDS
GTGTTACATGCTTATCTTCC+AGG 0.349073 tig0028018:-15724 Msa1436660:CDS
CAACAATAAAGGTGTGGAAT+TGG 0.355420 tig0028018:+15366 None:intergenic
TCTTTCATGCATCTCCATTT+GGG 0.358441 tig0028018:-15974 Msa1436660:CDS
TCCCAGCTGCTTGATGCAAT+TGG 0.358531 tig0028018:-15252 Msa1436660:CDS
CGAAGAGGATATTGAAAGAA+AGG 0.362395 tig0028018:-17695 Msa1436660:five_prime_UTR
CCTGCGCTACTTATGATTCA+TGG 0.371994 tig0028018:-17150 Msa1436660:CDS
AATAGTACATAAACTTTGTA+TGG 0.385743 tig0028018:-15191 Msa1436660:three_prime_UTR
GAAACAGATGTAATTGTGAT+TGG 0.389065 tig0028018:-17394 Msa1436660:CDS
ATCCTATTTGAGTAAGACTT+TGG 0.389095 tig0028018:+16019 None:intergenic
CTCACTCTCATTACATTACA+AGG 0.391228 tig0028018:+17526 None:intergenic
TGGAGTCTCCACAACAATAA+AGG 0.393345 tig0028018:+15355 None:intergenic
TACACCCCTCATCGCATTCA+TGG 0.395246 tig0028018:+17564 None:intergenic
AGAATCCTTTCATACGCAAT+TGG 0.397759 tig0028018:-16811 Msa1436660:CDS
ACTCCTAATCTGGCACCTAC+TGG 0.397996 tig0028018:-15754 Msa1436660:CDS
TTCCAATTGCATCAAGCAGC+TGG 0.400845 tig0028018:+15250 None:intergenic
CATTTCTCCCTGCTGAATCC+TGG 0.401568 tig0028018:+15504 None:intergenic
ATAAAAGAGTTTCTAATACT+TGG 0.410108 tig0028018:+15117 None:intergenic
TCATATAGTTGTAAATGATT+GGG 0.417919 tig0028018:-15833 Msa1436660:CDS
TAGTGTACTTACTCCTAATC+TGG 0.419014 tig0028018:-15764 Msa1436660:CDS
AACTGAACCATTTGAGTTGT+GGG 0.419173 tig0028018:-15701 Msa1436660:CDS
CAGGGTATACGCAGCGATCT+AGG 0.420176 tig0028018:-15862 Msa1436660:CDS
TCCGGTCCATCATTATTCTC+TGG 0.421373 tig0028018:-17241 Msa1436660:CDS
ATTGTGATTGGGAGTGGTAT+TGG 0.424946 tig0028018:-17382 Msa1436660:CDS
GTCATAGTAATGGGAGGATT+AGG 0.428264 tig0028018:-17465 Msa1436660:CDS
GTTGTAAATGATTGGGAAAG+AGG 0.432129 tig0028018:-15826 Msa1436660:CDS
TCACACATCAAAGGTTTCTT+CGG 0.434054 tig0028018:-15455 Msa1436660:CDS
GTACGAGGACTAGAGAAGTT+TGG 0.436491 tig0028018:-16276 Msa1436660:CDS
ATCATCATAGTCATAGTAAT+GGG 0.437707 tig0028018:-17474 Msa1436660:CDS
CGTGACAAGAAATCAGCTTC+AGG 0.438051 tig0028018:+17115 None:intergenic
AAATCTCCTCGAACAGATAG+AGG 0.446661 tig0028018:+16971 None:intergenic
AAATGTGAAGTGAAGTTAGT+TGG 0.458953 tig0028018:-15486 Msa1436660:CDS
ACTTTGGAACAACTTCTTGA+GGG 0.464503 tig0028018:+16035 None:intergenic
GCACCACTGGCAGCAACTGC+AGG 0.466053 tig0028018:+15312 None:intergenic
TCTGTACCAGCTTGTATAGC+TGG 0.473355 tig0028018:+15411 None:intergenic
CAGTGGGACCAGGATTCAGC+AGG 0.478022 tig0028018:-15512 Msa1436660:CDS
AGGTTTACATGTTTGCAGAA+TGG 0.481167 tig0028018:-16362 Msa1436660:CDS
CTCTTATTGTCTAACCGTAA+AGG 0.481489 tig0028018:-15007 Msa1436660:three_prime_UTR
ACCGGAGAAAGCATTAGTTT+AGG 0.482794 tig0028018:-17728 None:intergenic
AAAGGCTATAAGTTTGATTC+CGG 0.484501 tig0028018:-17259 Msa1436660:CDS
GATTAGGAAAGGTGGGGTTG+TGG 0.485581 tig0028018:-17449 Msa1436660:CDS
ATTCCACACCTTTATTGTTG+TGG 0.492890 tig0028018:-15363 Msa1436660:CDS
AAACAGATGTAATTGTGATT+GGG 0.492966 tig0028018:-17393 Msa1436660:CDS
ATATTGAAAGAAAGGAAATT+GGG 0.493766 tig0028018:-17687 Msa1436660:five_prime_UTR
CATCATCATAGTCATAGTAA+TGG 0.495952 tig0028018:-17475 Msa1436660:CDS
GTGGAGAGAGCAGTGGGACC+AGG 0.499060 tig0028018:-15522 Msa1436660:CDS
ATGGGAGGATTAGGAAAGGT+GGG 0.499467 tig0028018:-17456 Msa1436660:CDS
CAGCACCTCCAGCATGGTCG+TGG 0.499748 tig0028018:+17299 None:intergenic
CGGAGGAACAGAGGAACATA+TGG 0.499814 tig0028018:-15435 Msa1436660:CDS
AGTCCTTCCCACAACTCAAA+TGG 0.501774 tig0028018:+15694 None:intergenic
CAATACCTGCAGCTCCATCA+AGG 0.503593 tig0028018:+16310 None:intergenic
TCCCTTGTCTACAGCTGCAA+TGG 0.505505 tig0028018:-17002 Msa1436660:CDS
AGAAATCAGCTTCAGGTACA+TGG 0.506854 tig0028018:+17122 None:intergenic
CTCCTAATCTGGCACCTACT+GGG 0.508705 tig0028018:-15753 Msa1436660:CDS
GCTTCTCAGCTTCACTCCAA+TGG 0.509152 tig0028018:+16197 None:intergenic
GTTTCTAATACTTGGTAGAT+GGG 0.509848 tig0028018:+15125 None:intergenic
CCTCAGCATCAAATCCCAAA+TGG 0.511011 tig0028018:+15960 None:intergenic
CCATGAATCATAAGTAGCGC+AGG 0.513899 tig0028018:+17150 None:intergenic
GACGCCAATGCCAGGAAAAG+TGG 0.514468 tig0028018:+15335 None:intergenic
TAGTATATTGTCTGCAGAGA+TGG 0.518916 tig0028018:-16747 Msa1436660:intron
ATTCATGGCATGGCATGGCA+TGG 0.522894 tig0028018:+17579 None:intergenic
TTCCCAGTAGGTGCCAGATT+AGG 0.527245 tig0028018:+15751 None:intergenic
ACCAGAGAATAATGATGGAC+CGG 0.531175 tig0028018:+17240 None:intergenic
GAACTGAACCATTTGAGTTG+TGG 0.531241 tig0028018:-15702 Msa1436660:CDS
ATTAGCTACAATTGCACCAC+TGG 0.535074 tig0028018:+15299 None:intergenic
GACTTTGGAACAACTTCTTG+AGG 0.536940 tig0028018:+16034 None:intergenic
GTCCTGAAGCTGTTCAAGAA+TGG 0.537122 tig0028018:-17048 Msa1436660:CDS
TCAATCCAATTGCGTATGAA+AGG 0.537955 tig0028018:+16806 None:intergenic
TGCAAACCAGAGAATAATGA+TGG 0.543994 tig0028018:+17235 None:intergenic
TTCGAAAGCCACGACCATGC+TGG 0.544052 tig0028018:-17307 Msa1436660:CDS
TTCTCTGGTTTGCAGTCAAG+AGG 0.544317 tig0028018:-17226 Msa1436660:CDS
CACCAAATCAAATATTATGT+TGG 0.545046 tig0028018:+17610 None:intergenic
AAGGACCTTCACAACTATGC+AGG 0.545742 tig0028018:-17070 Msa1436660:CDS
TGAAAGAAAGGAAATTGGGT+AGG 0.546300 tig0028018:-17683 Msa1436660:five_prime_UTR
CCCTCATCGCATTCATGGCA+TGG 0.553831 tig0028018:+17569 None:intergenic
GACGTGGCTAAACTGAAGAC+AGG 0.554783 tig0028018:-17655 Msa1436660:five_prime_UTR
CGCTACTTATGATTCATGGA+TGG 0.556127 tig0028018:-17146 Msa1436660:CDS
GTCCCTGCAGTTGCTGCCAG+TGG 0.557851 tig0028018:-15315 Msa1436660:CDS
AGCCATTGCAGCTGTAGACA+AGG 0.561564 tig0028018:+17000 None:intergenic
CCATGCCATGAATGCGATGA+GGG 0.562349 tig0028018:-17569 Msa1436660:CDS
AATACCTGCAGCTCCATCAA+GGG 0.564396 tig0028018:+16311 None:intergenic
TCCAATTGCATCAAGCAGCT+GGG 0.566641 tig0028018:+15251 None:intergenic
TTCATGGCATGGCATGGCAT+GGG 0.566917 tig0028018:+17580 None:intergenic
GTGATTGGGAGTGGTATTGG+TGG 0.570399 tig0028018:-17379 Msa1436660:CDS
GAAAGAAAGGAAATTGGGTA+GGG 0.570727 tig0028018:-17682 Msa1436660:five_prime_UTR
GCATCAAGAACTTGAGCAAG+AGG 0.572179 tig0028018:+17190 None:intergenic
ATCGCATTCATGGCATGGCA+TGG 0.573566 tig0028018:+17574 None:intergenic
GTTGAAAATGACAGAGCCAT+TGG 0.574831 tig0028018:-16213 Msa1436660:CDS
CCATTTGGGATTTGATGCTG+AGG 0.576837 tig0028018:-15960 Msa1436660:intron
TTTGCAGTCAAGAGGTCCAC+AGG 0.577098 tig0028018:-17218 Msa1436660:CDS
CACATCAAAGGTTTCTTCGG+AGG 0.578196 tig0028018:-15452 Msa1436660:CDS
CAGGACCTGCATAGTTGTGA+AGG 0.579792 tig0028018:+17065 None:intergenic
AGAGCAGTGGAGAGAGCAGT+GGG 0.579813 tig0028018:-15528 Msa1436660:CDS
GAAGTCCACTCACACATCAA+AGG 0.579934 tig0028018:-15464 Msa1436660:CDS
GCAGTTCGTACATGCCAAGA+AGG 0.580617 tig0028018:-16101 Msa1436660:intron
GAGAGCAGTGGAGAGAGCAG+TGG 0.581460 tig0028018:-15529 Msa1436660:CDS
ATCATAAGTAGCGCAGGGGA+CGG 0.583077 tig0028018:+17156 None:intergenic
ACTGAGTTGTGCAGCACTGT+TGG 0.584888 tig0028018:-17356 Msa1436660:CDS
AATGGGAGGATTAGGAAAGG+TGG 0.589689 tig0028018:-17457 Msa1436660:CDS
GCCATTGCAGCTGTAGACAA+GGG 0.590322 tig0028018:+17001 None:intergenic
CGAGGACTAGAGAAGTTTGG+TGG 0.591605 tig0028018:-16273 Msa1436660:CDS
CAAACAACAAATAGATAATG+TGG 0.592493 tig0028018:-15551 Msa1436660:intron
GATGTAATTGTGATTGGGAG+TGG 0.593011 tig0028018:-17388 Msa1436660:CDS
AATCTCCTCGAACAGATAGA+GGG 0.593766 tig0028018:+16972 None:intergenic
AGATTAGGAGTAAGTACACT+AGG 0.595451 tig0028018:+15766 None:intergenic
GCTGATTTCTTGTCACGCAT+AGG 0.597690 tig0028018:-17109 Msa1436660:CDS
CACCACTGGCAGCAACTGCA+GGG 0.605933 tig0028018:+15313 None:intergenic
TGGAGTTGAATGTCCAGGAA+AGG 0.606615 tig0028018:+15386 None:intergenic
AATACTTGGTAGATGGGCAA+AGG 0.607524 tig0028018:+15131 None:intergenic
CATGAATCATAAGTAGCGCA+GGG 0.607675 tig0028018:+17151 None:intergenic
GAACCATTTGAGTTGTGGGA+AGG 0.609081 tig0028018:-15697 Msa1436660:CDS
TTTGCAGAATGGTACAAACC+AGG 0.612324 tig0028018:-16351 Msa1436660:CDS
TATGGACCAGCTATACAAGC+TGG 0.613740 tig0028018:-15417 Msa1436660:CDS
GTGTGAGAATTGCATCATGC+GGG 0.614927 tig0028018:+15218 None:intergenic
TTGCAGAATGGTACAAACCA+GGG 0.620272 tig0028018:-16350 Msa1436660:CDS
ATAGATAATGTGGAGAGCAG+TGG 0.622582 tig0028018:-15541 Msa1436660:intron
GGAATTGGAGTTGAATGTCC+AGG 0.624562 tig0028018:+15381 None:intergenic
AGTAATGGGAGGATTAGGAA+AGG 0.625364 tig0028018:-17460 Msa1436660:CDS
AGGTTTCTTCGGAGGAACAG+AGG 0.626999 tig0028018:-15444 Msa1436660:CDS
GACTAGAGAAGTTTGGTGGG+CGG 0.629357 tig0028018:-16269 Msa1436660:CDS
ATTGTTGATGCTCTTGTACG+AGG 0.629566 tig0028018:-16291 Msa1436660:CDS
CATCAAGAACTTGAGCAAGA+GGG 0.633604 tig0028018:+17191 None:intergenic
ATTGGAGTGAAGCTGAGAAG+CGG 0.638801 tig0028018:-16195 Msa1436660:CDS
GCGATGAGGGGTGTAAGTGT+TGG 0.638850 tig0028018:-17556 Msa1436660:CDS
AATGAGCAGCACCTCCAGCA+TGG 0.642493 tig0028018:+17293 None:intergenic
ATACCTGCAGCTCCATCAAG+GGG 0.643456 tig0028018:+16312 None:intergenic
TCTTAAAGCTCAAAGATCAG+AGG 0.643901 tig0028018:-15644 Msa1436660:intron
TGCAGAATGGTACAAACCAG+GGG 0.644445 tig0028018:-16349 Msa1436660:CDS
ATCTCCTCGAACAGATAGAG+GGG 0.646167 tig0028018:+16973 None:intergenic
ATCATAGTCATAGTAATGGG+AGG 0.651087 tig0028018:-17471 Msa1436660:CDS
AAAAGGTGAGAGAAGTTGTG+TGG 0.652152 tig0028018:+16862 None:intergenic
TGTAACACATGTTTCCCAGT+AGG 0.652977 tig0028018:+15739 None:intergenic
TGAGCAAGAGGGTTAGCCTG+TGG 0.654171 tig0028018:+17202 None:intergenic
GATTTCTCTTCAAAGTCACG+TGG 0.656256 tig0028018:-16247 Msa1436660:CDS
GAGGACTAGAGAAGTTTGGT+GGG 0.661720 tig0028018:-16272 Msa1436660:CDS
TCTCCACAACAATAAAGGTG+TGG 0.665845 tig0028018:+15360 None:intergenic
AGAAACCTTTGATGTGTGAG+TGG 0.673422 tig0028018:+15459 None:intergenic
AGGTGCATATCTAGCAGCAG+CGG 0.676346 tig0028018:+16934 None:intergenic
GAAAGCCACGACCATGCTGG+AGG 0.682926 tig0028018:-17304 Msa1436660:CDS
TGGGAGGATTAGGAAAGGTG+GGG 0.683293 tig0028018:-17455 Msa1436660:CDS
AGTGGGACCAGGATTCAGCA+GGG 0.693423 tig0028018:-15511 Msa1436660:CDS
TGTGTGAGAATTGCATCATG+CGG 0.698234 tig0028018:+15217 None:intergenic
TGTGAGCAATGCATCAATGT+GGG 0.699079 tig0028018:-16074 Msa1436660:CDS
TTGTGAGCAATGCATCAATG+TGG 0.700183 tig0028018:-16075 Msa1436660:CDS
GCCATGCCATGAATGCGATG+AGG 0.701444 tig0028018:-17570 Msa1436660:CDS
TCTCCTCGAACAGATAGAGG+GGG 0.703760 tig0028018:+16974 None:intergenic
GTGGAACGAAGAGCAGCCTG+AGG 0.714071 tig0028018:+16881 None:intergenic
ATGAATCATAAGTAGCGCAG+GGG 0.721253 tig0028018:+17152 None:intergenic
CATGCCATGAATGCGATGAG+GGG 0.728710 tig0028018:-17568 Msa1436660:CDS
GCAGAATGGTACAAACCAGG+GGG 0.746992 tig0028018:-16348 Msa1436660:CDS
TACCTGCAGCTCCATCAAGG+GGG 0.749948 tig0028018:+16313 None:intergenic
AATTGGGTAGGGTAGTGACG+TGG 0.751723 tig0028018:-17671 Msa1436660:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTTAAGAAATGAAAT+TGG + tig0028018:16193-16212 None:intergenic 15.0%
!! TCAAAATTAATATACTTACT+TGG + tig0028018:16522-16541 None:intergenic 15.0%
!!! TCATATTTTGTATATATACA+TGG - tig0028018:17659-17678 Msa1436660:five_prime_UTR 15.0%
!! ATATTGAAAGAAAGGAAATT+GGG - tig0028018:15004-15023 Msa1436660:three_prime_UTR 20.0%
!!! ATAATATTTGATTTGGTGTT+TGG - tig0028018:15086-15105 Msa1436660:intron 20.0%
!! ATAACACATAAATCTCTAAA+GGG - tig0028018:16110-16129 Msa1436660:intron 20.0%
!! ATCATATAGTTGTAAATGAT+TGG - tig0028018:16857-16876 Msa1436660:CDS 20.0%
!! TCATATAGTTGTAAATGATT+GGG - tig0028018:16858-16877 Msa1436660:CDS 20.0%
!! AATAGTACATAAACTTTGTA+TGG - tig0028018:17500-17519 Msa1436660:CDS 20.0%
!! ATAAAAGAGTTTCTAATACT+TGG + tig0028018:17577-17596 None:intergenic 20.0%
!! GTTCATCAAAAATAAATGTT+AGG + tig0028018:17627-17646 None:intergenic 20.0%
! GATATTGAAAGAAAGGAAAT+TGG - tig0028018:15003-15022 Msa1436660:three_prime_UTR 25.0%
! CACCAACATAATATTTGATT+TGG - tig0028018:15079-15098 Msa1436660:intron 25.0%
! CACCAAATCAAATATTATGT+TGG + tig0028018:15084-15103 None:intergenic 25.0%
! ATCATCATAGTCATAGTAAT+GGG - tig0028018:15217-15236 Msa1436660:three_prime_UTR 25.0%
! AAACAGATGTAATTGTGATT+GGG - tig0028018:15298-15317 Msa1436660:CDS 25.0%
!!! AAAAAGGTATTGAAAAGAGA+AGG + tig0028018:15780-15799 None:intergenic 25.0%
!! TTTCAATACCTTTTTCCAAA+TGG - tig0028018:15785-15804 Msa1436660:CDS 25.0%
!! TTCAATACCTTTTTCCAAAT+GGG - tig0028018:15786-15805 Msa1436660:CDS 25.0%
! CATAACACATAAATCTCTAA+AGG - tig0028018:16109-16128 Msa1436660:intron 25.0%
!!! AGCTTTAAGATTTCTGTATT+CGG + tig0028018:17037-17056 None:intergenic 25.0%
! CAAACAACAAATAGATAATG+TGG - tig0028018:17140-17159 Msa1436660:CDS 25.0%
CATCATCATAGTCATAGTAA+TGG - tig0028018:15216-15235 Msa1436660:three_prime_UTR 30.0%
GAAACAGATGTAATTGTGAT+TGG - tig0028018:15297-15316 Msa1436660:CDS 30.0%
AAAGGCTATAAGTTTGATTC+CGG - tig0028018:15432-15451 Msa1436660:CDS 30.0%
TTGCAAAGAGTCAAGTATTT+GGG + tig0028018:15856-15875 None:intergenic 30.0%
AGGATAGAAACTAGTTATTG+TGG + tig0028018:16051-16070 None:intergenic 30.0%
TTCCAAAGTCTTACTCAAAT+AGG - tig0028018:16670-16689 Msa1436660:intron 30.0%
ATCCTATTTGAGTAAGACTT+TGG + tig0028018:16675-16694 None:intergenic 30.0%
AAATGTGAAGTGAAGTTAGT+TGG - tig0028018:17205-17224 Msa1436660:CDS 30.0%
GTTTCTAATACTTGGTAGAT+GGG + tig0028018:17569-17588 None:intergenic 30.0%
AGTTTCTAATACTTGGTAGA+TGG + tig0028018:17570-17589 None:intergenic 30.0%
! TTAGGTGAATGTTTTCGAAG+AGG - tig0028018:14981-15000 Msa1436660:three_prime_UTR 35.0%
CGAAGAGGATATTGAAAGAA+AGG - tig0028018:14996-15015 Msa1436660:three_prime_UTR 35.0%
TGAAAGAAAGGAAATTGGGT+AGG - tig0028018:15008-15027 Msa1436660:three_prime_UTR 35.0%
GAAAGAAAGGAAATTGGGTA+GGG - tig0028018:15009-15028 Msa1436660:three_prime_UTR 35.0%
CTCACTCTCATTACATTACA+AGG + tig0028018:15168-15187 None:intergenic 35.0%
! ATCATAGTCATAGTAATGGG+AGG - tig0028018:15220-15239 Msa1436660:three_prime_UTR 35.0%
! GCTCATTCTTTTGATGTCAA+AGG - tig0028018:15414-15433 Msa1436660:CDS 35.0%
TGCAAACCAGAGAATAATGA+TGG + tig0028018:15459-15478 None:intergenic 35.0%
! AGGTCCTACTGAGTTTTTAA+AGG - tig0028018:15602-15621 Msa1436660:intron 35.0%
! AGGTCCTTTAAAAACTCAGT+AGG + tig0028018:15609-15628 None:intergenic 35.0%
GAGTCAAGTATTTGGGAAAA+AGG + tig0028018:15849-15868 None:intergenic 35.0%
GTTGCAAAGAGTCAAGTATT+TGG + tig0028018:15857-15876 None:intergenic 35.0%
AGAATCCTTTCATACGCAAT+TGG - tig0028018:15880-15899 Msa1436660:intron 35.0%
TCAATCCAATTGCGTATGAA+AGG + tig0028018:15888-15907 None:intergenic 35.0%
TTACTTTCTTTCTTGCTTGC+TGG - tig0028018:15909-15928 Msa1436660:intron 35.0%
TAGTATATTGTCTGCAGAGA+TGG - tig0028018:15944-15963 Msa1436660:intron 35.0%
TCTGCACAAAAAAATGAGAG+AGG + tig0028018:16071-16090 None:intergenic 35.0%
ACTGTCTCTAAGTAAACAAC+AGG + tig0028018:16156-16175 None:intergenic 35.0%
ACCTAAAAGCAGCAGTTAAA+TGG - tig0028018:16212-16231 Msa1436660:CDS 35.0%
!!! TCCATTTAACTGCTGCTTTT+AGG + tig0028018:16216-16235 None:intergenic 35.0%
GAAAACTAACGAAATAGTGC+TGG - tig0028018:16238-16257 Msa1436660:CDS 35.0%
AGGTTTACATGTTTGCAGAA+TGG - tig0028018:16329-16348 Msa1436660:CDS 35.0%
!! ACTTTGGAACAACTTCTTGA+GGG + tig0028018:16659-16678 None:intergenic 35.0%
ATCTTTCATGCATCTCCATT+TGG - tig0028018:16716-16735 Msa1436660:intron 35.0%
TCTTTCATGCATCTCCATTT+GGG - tig0028018:16717-16736 Msa1436660:intron 35.0%
GAATACTTCAAACAGATGCA+TGG + tig0028018:16796-16815 None:intergenic 35.0%
GTTGTAAATGATTGGGAAAG+AGG - tig0028018:16865-16884 Msa1436660:CDS 35.0%
AGATTAGGAGTAAGTACACT+AGG + tig0028018:16928-16947 None:intergenic 35.0%
TAGTGTACTTACTCCTAATC+TGG - tig0028018:16927-16946 Msa1436660:CDS 35.0%
!! AACTGAACCATTTGAGTTGT+GGG - tig0028018:16990-17009 Msa1436660:CDS 35.0%
TCTTAAAGCTCAAAGATCAG+AGG - tig0028018:17047-17066 Msa1436660:CDS 35.0%
TCACACATCAAAGGTTTCTT+CGG - tig0028018:17236-17255 Msa1436660:CDS 35.0%
! CAACAATAAAGGTGTGGAAT+TGG + tig0028018:17328-17347 None:intergenic 35.0%
ATTCCACACCTTTATTGTTG+TGG - tig0028018:17328-17347 Msa1436660:CDS 35.0%
CTCTTATTGTCTAACCGTAA+AGG - tig0028018:17684-17703 Msa1436660:five_prime_UTR 35.0%
! GTCATAGTAATGGGAGGATT+AGG - tig0028018:15226-15245 Msa1436660:exon 40.0%
! AGTAATGGGAGGATTAGGAA+AGG - tig0028018:15231-15250 Msa1436660:exon 40.0%
GATGTAATTGTGATTGGGAG+TGG - tig0028018:15303-15322 Msa1436660:CDS 40.0%
ATTGTGATTGGGAGTGGTAT+TGG - tig0028018:15309-15328 Msa1436660:CDS 40.0%
!! ACCAGAGAATAATGATGGAC+CGG + tig0028018:15454-15473 None:intergenic 40.0%
CATCAAGAACTTGAGCAAGA+GGG + tig0028018:15503-15522 None:intergenic 40.0%
TGCTCAAGTTCTTGATGCTT+TGG - tig0028018:15506-15525 Msa1436660:CDS 40.0%
GCTCAAGTTCTTGATGCTTT+GGG - tig0028018:15507-15526 Msa1436660:CDS 40.0%
ATGAATCATAAGTAGCGCAG+GGG + tig0028018:15542-15561 None:intergenic 40.0%
CATGAATCATAAGTAGCGCA+GGG + tig0028018:15543-15562 None:intergenic 40.0%
CGCTACTTATGATTCATGGA+TGG - tig0028018:15545-15564 Msa1436660:intron 40.0%
AGAAATCAGCTTCAGGTACA+TGG + tig0028018:15572-15591 None:intergenic 40.0%
! TCAAGAATGGCAGAAGCTTT+TGG - tig0028018:15656-15675 Msa1436660:CDS 40.0%
AATCTCCTCGAACAGATAGA+GGG + tig0028018:15722-15741 None:intergenic 40.0%
AAATCTCCTCGAACAGATAG+AGG + tig0028018:15723-15742 None:intergenic 40.0%
CTATCTGTTCGAGGAGATTT+CGG - tig0028018:15723-15742 Msa1436660:CDS 40.0%
AAAAGGTGAGAGAAGTTGTG+TGG + tig0028018:15832-15851 None:intergenic 40.0%
!! TGATGAGTGGTAATGGCAAT+TGG + tig0028018:15989-16008 None:intergenic 40.0%
! AATGATTGCACGTTGATGAG+TGG + tig0028018:16002-16021 None:intergenic 40.0%
AACATGTAAACCTGAGGGAA+GGG + tig0028018:16322-16341 None:intergenic 40.0%
AAACATGTAAACCTGAGGGA+AGG + tig0028018:16323-16342 None:intergenic 40.0%
CTGCAAACATGTAAACCTGA+GGG + tig0028018:16327-16346 None:intergenic 40.0%
TCTGCAAACATGTAAACCTG+AGG + tig0028018:16328-16347 None:intergenic 40.0%
TTTGCAGAATGGTACAAACC+AGG - tig0028018:16340-16359 Msa1436660:CDS 40.0%
TTGCAGAATGGTACAAACCA+GGG - tig0028018:16341-16360 Msa1436660:CDS 40.0%
ATTGTTGATGCTCTTGTACG+AGG - tig0028018:16400-16419 Msa1436660:intron 40.0%
GATTTCTCTTCAAAGTCACG+TGG - tig0028018:16444-16463 Msa1436660:intron 40.0%
GTTGAAAATGACAGAGCCAT+TGG - tig0028018:16478-16497 Msa1436660:intron 40.0%
TTGTGAGCAATGCATCAATG+TGG - tig0028018:16616-16635 Msa1436660:intron 40.0%
TGTGAGCAATGCATCAATGT+GGG - tig0028018:16617-16636 Msa1436660:intron 40.0%
!! GACTTTGGAACAACTTCTTG+AGG + tig0028018:16660-16679 None:intergenic 40.0%
TATTCAACATCGAGTGAGCA+GGG - tig0028018:16811-16830 Msa1436660:CDS 40.0%
TGTAACACATGTTTCCCAGT+AGG + tig0028018:16955-16974 None:intergenic 40.0%
GTGTTACATGCTTATCTTCC+AGG - tig0028018:16967-16986 Msa1436660:CDS 40.0%
AACTCAAATGGTTCAGTTCC+TGG + tig0028018:16988-17007 None:intergenic 40.0%
!! GAACTGAACCATTTGAGTTG+TGG - tig0028018:16989-17008 Msa1436660:CDS 40.0%
ATAGATAATGTGGAGAGCAG+TGG - tig0028018:17150-17169 Msa1436660:CDS 40.0%
AGAAACCTTTGATGTGTGAG+TGG + tig0028018:17235-17254 None:intergenic 40.0%
TCTCCACAACAATAAAGGTG+TGG + tig0028018:17334-17353 None:intergenic 40.0%
TGGAGTCTCCACAACAATAA+AGG + tig0028018:17339-17358 None:intergenic 40.0%
ATTAGCTACAATTGCACCAC+TGG + tig0028018:17395-17414 None:intergenic 40.0%
TGTGTGAGAATTGCATCATG+CGG + tig0028018:17477-17496 None:intergenic 40.0%
AATACTTGGTAGATGGGCAA+AGG + tig0028018:17563-17582 None:intergenic 40.0%
! CATTTTCATGCTCGCCTTTA+CGG + tig0028018:17701-17720 None:intergenic 40.0%
AATGGGAGGATTAGGAAAGG+TGG - tig0028018:15234-15253 Msa1436660:exon 45.0%
ATGGGAGGATTAGGAAAGGT+GGG - tig0028018:15235-15254 Msa1436660:exon 45.0%
TCCGGTCCATCATTATTCTC+TGG - tig0028018:15450-15469 Msa1436660:CDS 45.0%
! TTCTCTGGTTTGCAGTCAAG+AGG - tig0028018:15465-15484 Msa1436660:CDS 45.0%
GCATCAAGAACTTGAGCAAG+AGG + tig0028018:15504-15523 None:intergenic 45.0%
CCATGAATCATAAGTAGCGC+AGG + tig0028018:15544-15563 None:intergenic 45.0%
CCTGCGCTACTTATGATTCA+TGG - tig0028018:15541-15560 Msa1436660:intron 45.0%
CGTGACAAGAAATCAGCTTC+AGG + tig0028018:15579-15598 None:intergenic 45.0%
! GCTGATTTCTTGTCACGCAT+AGG - tig0028018:15582-15601 Msa1436660:intron 45.0%
AAGGACCTTCACAACTATGC+AGG - tig0028018:15621-15640 Msa1436660:intron 45.0%
GTCCTGAAGCTGTTCAAGAA+TGG - tig0028018:15643-15662 Msa1436660:intron 45.0%
TGCCATTCTTGAACAGCTTC+AGG + tig0028018:15648-15667 None:intergenic 45.0%
ATCTCCTCGAACAGATAGAG+GGG + tig0028018:15721-15740 None:intergenic 45.0%
CTGAGGACCCATTTGGAAAA+AGG + tig0028018:15796-15815 None:intergenic 45.0%
! CTTTTTCCAAATGGGTCCTC+AGG - tig0028018:15794-15813 Msa1436660:CDS 45.0%
! TGCACGTTGATGAGTGGTAA+TGG + tig0028018:15996-16015 None:intergenic 45.0%
TGCAGAATGGTACAAACCAG+GGG - tig0028018:16342-16361 Msa1436660:CDS 45.0%
AATACCTGCAGCTCCATCAA+GGG + tig0028018:16383-16402 None:intergenic 45.0%
GTACGAGGACTAGAGAAGTT+TGG - tig0028018:16415-16434 Msa1436660:intron 45.0%
GAGGACTAGAGAAGTTTGGT+GGG - tig0028018:16419-16438 Msa1436660:intron 45.0%
ATTGGAGTGAAGCTGAGAAG+CGG - tig0028018:16496-16515 Msa1436660:intron 45.0%
ATTGCTCACAACAGCCTTCT+TGG + tig0028018:16607-16626 None:intergenic 45.0%
CCTCAGCATCAAATCCCAAA+TGG + tig0028018:16734-16753 None:intergenic 45.0%
! CCATTTGGGATTTGATGCTG+AGG - tig0028018:16731-16750 Msa1436660:intron 45.0%
! TTGATGCTGAGGTGAGGTTT+TGG - tig0028018:16742-16761 Msa1436660:intron 45.0%
GTATTCAACATCGAGTGAGC+AGG - tig0028018:16810-16829 Msa1436660:CDS 45.0%
!! GAACCATTTGAGTTGTGGGA+AGG - tig0028018:16994-17013 Msa1436660:CDS 45.0%
AGTCCTTCCCACAACTCAAA+TGG + tig0028018:17000-17019 None:intergenic 45.0%
GAAGTCCACTCACACATCAA+AGG - tig0028018:17227-17246 Msa1436660:CDS 45.0%
CACATCAAAGGTTTCTTCGG+AGG - tig0028018:17239-17258 Msa1436660:CDS 45.0%
TATGGACCAGCTATACAAGC+TGG - tig0028018:17274-17293 Msa1436660:CDS 45.0%
TCTGTACCAGCTTGTATAGC+TGG + tig0028018:17283-17302 None:intergenic 45.0%
TGGAGTTGAATGTCCAGGAA+AGG + tig0028018:17308-17327 None:intergenic 45.0%
GGAATTGGAGTTGAATGTCC+AGG + tig0028018:17313-17332 None:intergenic 45.0%
TCCAATTGCATCAAGCAGCT+GGG + tig0028018:17443-17462 None:intergenic 45.0%
TTCCAATTGCATCAAGCAGC+TGG + tig0028018:17444-17463 None:intergenic 45.0%
GTGTGAGAATTGCATCATGC+GGG + tig0028018:17476-17495 None:intergenic 45.0%
AATTGGGTAGGGTAGTGACG+TGG - tig0028018:15020-15039 Msa1436660:three_prime_UTR 50.0%
GACGTGGCTAAACTGAAGAC+AGG - tig0028018:15036-15055 Msa1436660:three_prime_UTR 50.0%
TTCATGGCATGGCATGGCAT+GGG + tig0028018:15114-15133 None:intergenic 50.0%
ATTCATGGCATGGCATGGCA+TGG + tig0028018:15115-15134 None:intergenic 50.0%
ATCGCATTCATGGCATGGCA+TGG + tig0028018:15120-15139 None:intergenic 50.0%
CCATGCCATGAATGCGATGA+GGG - tig0028018:15122-15141 Msa1436660:three_prime_UTR 50.0%
CATGCCATGAATGCGATGAG+GGG - tig0028018:15123-15142 Msa1436660:three_prime_UTR 50.0%
TACACCCCTCATCGCATTCA+TGG + tig0028018:15130-15149 None:intergenic 50.0%
TGGGAGGATTAGGAAAGGTG+GGG - tig0028018:15236-15255 Msa1436660:exon 50.0%
GATTAGGAAAGGTGGGGTTG+TGG - tig0028018:15242-15261 Msa1436660:exon 50.0%
! GTGATTGGGAGTGGTATTGG+TGG - tig0028018:15312-15331 Msa1436660:CDS 50.0%
ACTGAGTTGTGCAGCACTGT+TGG - tig0028018:15335-15354 Msa1436660:CDS 50.0%
TTTGCAGTCAAGAGGTCCAC+AGG - tig0028018:15473-15492 Msa1436660:CDS 50.0%
ATCATAAGTAGCGCAGGGGA+CGG + tig0028018:15538-15557 None:intergenic 50.0%
CAGGACCTGCATAGTTGTGA+AGG + tig0028018:15629-15648 None:intergenic 50.0%
TCCCTTGTCTACAGCTGCAA+TGG - tig0028018:15689-15708 Msa1436660:CDS 50.0%
GCCATTGCAGCTGTAGACAA+GGG + tig0028018:15693-15712 None:intergenic 50.0%
AGCCATTGCAGCTGTAGACA+AGG + tig0028018:15694-15713 None:intergenic 50.0%
TCTCCTCGAACAGATAGAGG+GGG + tig0028018:15720-15739 None:intergenic 50.0%
AGGTGCATATCTAGCAGCAG+CGG + tig0028018:15760-15779 None:intergenic 50.0%
GCAGAATGGTACAAACCAGG+GGG - tig0028018:16343-16362 Msa1436660:CDS 50.0%
TGTCTTGAGTACCCCCTTGA+TGG - tig0028018:16367-16386 Msa1436660:intron 50.0%
ATACCTGCAGCTCCATCAAG+GGG + tig0028018:16382-16401 None:intergenic 50.0%
CAATACCTGCAGCTCCATCA+AGG + tig0028018:16384-16403 None:intergenic 50.0%
CGAGGACTAGAGAAGTTTGG+TGG - tig0028018:16418-16437 Msa1436660:intron 50.0%
! GACTAGAGAAGTTTGGTGGG+CGG - tig0028018:16422-16441 Msa1436660:intron 50.0%
GCTTCTCAGCTTCACTCCAA+TGG + tig0028018:16497-16516 None:intergenic 50.0%
GCAGTTCGTACATGCCAAGA+AGG - tig0028018:16590-16609 Msa1436660:intron 50.0%
TGGGATTTGATGCTGAGGTG+AGG - tig0028018:16736-16755 Msa1436660:intron 50.0%
ACTCCTAATCTGGCACCTAC+TGG - tig0028018:16937-16956 Msa1436660:CDS 50.0%
CTCCTAATCTGGCACCTACT+GGG - tig0028018:16938-16957 Msa1436660:CDS 50.0%
TTCCCAGTAGGTGCCAGATT+AGG + tig0028018:16943-16962 None:intergenic 50.0%
CATTTCTCCCTGCTGAATCC+TGG + tig0028018:17190-17209 None:intergenic 50.0%
AGGTTTCTTCGGAGGAACAG+AGG - tig0028018:17247-17266 Msa1436660:CDS 50.0%
CGGAGGAACAGAGGAACATA+TGG - tig0028018:17256-17275 Msa1436660:CDS 50.0%
GCTGGTACAGATACCTTTCC+TGG - tig0028018:17292-17311 Msa1436660:CDS 50.0%
!! TGTGGAGACTCCACTTTTCC+TGG - tig0028018:17346-17365 Msa1436660:CDS 50.0%
!! GACTCCACTTTTCCTGGCAT+TGG - tig0028018:17352-17371 Msa1436660:CDS 50.0%
TCCCAGCTGCTTGATGCAAT+TGG - tig0028018:17439-17458 Msa1436660:CDS 50.0%
GCCATGCCATGAATGCGATG+AGG - tig0028018:15121-15140 Msa1436660:three_prime_UTR 55.0%
CCCTCATCGCATTCATGGCA+TGG + tig0028018:15125-15144 None:intergenic 55.0%
! GCGATGAGGGGTGTAAGTGT+TGG - tig0028018:15135-15154 Msa1436660:three_prime_UTR 55.0%
TTCGAAAGCCACGACCATGC+TGG - tig0028018:15384-15403 Msa1436660:CDS 55.0%
AATGAGCAGCACCTCCAGCA+TGG + tig0028018:15401-15420 None:intergenic 55.0%
!! TGAGCAAGAGGGTTAGCCTG+TGG + tig0028018:15492-15511 None:intergenic 55.0%
CTTCCCCCTCTATCTGTTCG+AGG - tig0028018:15714-15733 Msa1436660:CDS 55.0%
TACCTGCAGCTCCATCAAGG+GGG + tig0028018:16381-16400 None:intergenic 55.0%
CAGGGTATACGCAGCGATCT+AGG - tig0028018:16829-16848 Msa1436660:CDS 55.0%
AGAGCAGTGGAGAGAGCAGT+GGG - tig0028018:17163-17182 Msa1436660:CDS 55.0%
AGTGGGACCAGGATTCAGCA+GGG - tig0028018:17180-17199 Msa1436660:CDS 55.0%
GACGCCAATGCCAGGAAAAG+TGG + tig0028018:17359-17378 None:intergenic 55.0%
GAAAGCCACGACCATGCTGG+AGG - tig0028018:15387-15406 Msa1436660:CDS 60.0%
GAGCAGCCTGAGGACCCATT+TGG + tig0028018:15803-15822 None:intergenic 60.0%
GTGGAACGAAGAGCAGCCTG+AGG + tig0028018:15813-15832 None:intergenic 60.0%
CAGTTGCTCTCCCTTCCCTC+AGG - tig0028018:16309-16328 Msa1436660:CDS 60.0%
TACCCCCTTGATGGAGCTGC+AGG - tig0028018:16376-16395 Msa1436660:intron 60.0%
GAGAGCAGTGGAGAGAGCAG+TGG - tig0028018:17162-17181 Msa1436660:CDS 60.0%
CAGTGGGACCAGGATTCAGC+AGG - tig0028018:17179-17198 Msa1436660:CDS 60.0%
CACCACTGGCAGCAACTGCA+GGG + tig0028018:17381-17400 None:intergenic 60.0%
CAGCACCTCCAGCATGGTCG+TGG + tig0028018:15395-15414 None:intergenic 65.0%
GGGTACTCAAGACAGCCCCC+TGG + tig0028018:16361-16380 None:intergenic 65.0%
GTGGAGAGAGCAGTGGGACC+AGG - tig0028018:17169-17188 Msa1436660:CDS 65.0%
ACTGCAGGGACGCCAATGCC+AGG + tig0028018:17367-17386 None:intergenic 65.0%
GTCCCTGCAGTTGCTGCCAG+TGG - tig0028018:17376-17395 Msa1436660:CDS 65.0%
GCACCACTGGCAGCAACTGC+AGG + tig0028018:17382-17401 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0028018 gene 14969 17744 14969 ID=Msa1436660;Name=Msa1436660
tig0028018 mRNA 14969 17744 14969 ID=Msa1436660-mRNA-1;Parent=Msa1436660;Name=Msa1436660-mRNA-1;_AED=0.09;_eAED=0.09;_QI=145|1|1|1|0.8|0.66|6|255|584
tig0028018 exon 14969 15095 14969 ID=Msa1436660-mRNA-1:exon:10368;Parent=Msa1436660-mRNA-1
tig0028018 exon 15117 15559 15117 ID=Msa1436660-mRNA-1:exon:10367;Parent=Msa1436660-mRNA-1
tig0028018 exon 15645 15881 15645 ID=Msa1436660-mRNA-1:exon:10366;Parent=Msa1436660-mRNA-1
tig0028018 exon 15961 16119 15961 ID=Msa1436660-mRNA-1:exon:10365;Parent=Msa1436660-mRNA-1
tig0028018 exon 16191 16382 16191 ID=Msa1436660-mRNA-1:exon:10364;Parent=Msa1436660-mRNA-1
tig0028018 exon 16748 17744 16748 ID=Msa1436660-mRNA-1:exon:10363;Parent=Msa1436660-mRNA-1
tig0028018 five_prime_UTR 17600 17744 17600 ID=Msa1436660-mRNA-1:five_prime_utr;Parent=Msa1436660-mRNA-1
tig0028018 CDS 16748 17599 16748 ID=Msa1436660-mRNA-1:cds;Parent=Msa1436660-mRNA-1
tig0028018 CDS 16191 16382 16191 ID=Msa1436660-mRNA-1:cds;Parent=Msa1436660-mRNA-1
tig0028018 CDS 15961 16119 15961 ID=Msa1436660-mRNA-1:cds;Parent=Msa1436660-mRNA-1
tig0028018 CDS 15645 15881 15645 ID=Msa1436660-mRNA-1:cds;Parent=Msa1436660-mRNA-1
tig0028018 CDS 15245 15559 15245 ID=Msa1436660-mRNA-1:cds;Parent=Msa1436660-mRNA-1
tig0028018 three_prime_UTR 15117 15244 15117 ID=Msa1436660-mRNA-1:three_prime_utr;Parent=Msa1436660-mRNA-1
tig0028018 three_prime_UTR 14969 15095 14969 ID=Msa1436660-mRNA-1:three_prime_utr;Parent=Msa1436660-mRNA-1
Gene Sequence

>Msa1436660

ATGCCATGCCATGCCATGAATGCGATGAGGGGTGTAAGTGTTGGTGTGTTTCCTTGTAATGTAATGAGAGTGAGAAGATACTGTTCAAGAATTGATGATGATCATCATCATAGTCATAGTAATGGGAGGATTAGGAAAGGTGGGGTTGTGGTGCGAAACAGCAGCAACAAAGTAGATGAAACAGAAACAGATGTAATTGTGATTGGGAGTGGTATTGGTGGACTGAGTTGTGCAGCACTGTTGGCAAGATATGAACAAGATGTTGTCGTTTTCGAAAGCCACGACCATGCTGGAGGTGCTGCTCATTCTTTTGATGTCAAAGGCTATAAGTTTGATTCCGGTCCATCATTATTCTCTGGTTTGCAGTCAAGAGGTCCACAGGCTAACCCTCTTGCTCAAGTTCTTGATGCTTTGGGAGAGTCCGTCCCCTGCGCTACTTATGATTCATGGATGGTCCATGTACCTGAAGCTGATTTCTTGTCACGCATAGGTCCTACTGAGTTTTTAAAGGACCTTCACAACTATGCAGGTCCTGAAGCTGTTCAAGAATGGCAGAAGCTTTTGGATGCTGTACTTCCCTTGTCTACAGCTGCAATGGCTCTTCCCCCTCTATCTGTTCGAGGAGATTTCGGTGTTCTTTACACCGCTGCTGCTAGATATGCACCTTCTCTTTTCAATACCTTTTTCCAAATGGGTCCTCAGGCTGCTCTTCGTTCCACACAACTTCTCTCACCTTTTTCCCAAATACTTGACTCTTTGCAACTAAAGAATCCTTTCATACGCAATTGGATTGACTTACTTTCTTTCTTGCTTGCTGGTGTCAAATCTGATAGTATATTGTCTGCAGAGATGGTTTACATGTTTGCAGAATGGTACAAACCAGGGGGCTGTCTTGAGTACCCCCTTGATGGAGCTGCAGGTATTGTTGATGCTCTTGTACGAGGACTAGAGAAGTTTGGTGGGCGGATTTCTCTTCAAAGTCACGTGGAAAAGATTGTTGTTGAAAATGACAGAGCCATTGGAGTGAAGCTGAGAAGCGGCCAATTCGTACATGCCAAGAAGGCTGTTGTGAGCAATGCATCAATGTGGGATACTTTAAAATTGCTCCCTCAAGAAGTTGTTCCAAAGTCTTACTCAAATAGGATTAACACGACTAGTCAGTGTGAATCTTTCATGCATCTCCATTTGGGATTTGATGCTGAGGGTATACGCAGCGATCTAGGAATTCATCATATAGTTGTAAATGATTGGGAAAGAGGAGTTGACGCAGATCAGAATGTTGTGTTGATATCAGTTCCTAGTGTACTTACTCCTAATCTGGCACCTACTGGGAAACATGTGTTACATGCTTATCTTCCAGGAACTGAACCATTTGAGTTGTGGGAAGGACTTGATCGTAAGAGTGCCGAATACAGAAATCTTAAAGCTCAAAGATCAGAGATAATGTGGAGAGCAGTGGAGAGAGCAGTGGGACCAGGATTCAGCAGGGAGAAATGTGAAGTGAAGTTAGTTGGAAGTCCACTCACACATCAAAGGTTTCTTCGGAGGAACAGAGGAACATATGGACCAGCTATACAAGCTGGTACAGATACCTTTCCTGGACATTCAACTCCAATTCCACACCTTTATTGTTGTGGAGACTCCACTTTTCCTGGCATTGGCGTCCCTGCAGTTGCTGCCAGTGGTGCAATTGTAGCTAATTCTCTAGTTTCAGTGTCTCAGCATTCCCAGCTGCTTGATGCAATTGGAATTTGA

Protein sequence

>Msa1436660

MPCHAMNAMRGVSVGVFPCNVMRVRRYCSRIDDDHHHSHSNGRIRKGGVVVRNSSNKVDETETDVIVIGSGIGGLSCAALLARYEQDVVVFESHDHAGGAAHSFDVKGYKFDSGPSLFSGLQSRGPQANPLAQVLDALGESVPCATYDSWMVHVPEADFLSRIGPTEFLKDLHNYAGPEAVQEWQKLLDAVLPLSTAAMALPPLSVRGDFGVLYTAAARYAPSLFNTFFQMGPQAALRSTQLLSPFSQILDSLQLKNPFIRNWIDLLSFLLAGVKSDSILSAEMVYMFAEWYKPGGCLEYPLDGAAGIVDALVRGLEKFGGRISLQSHVEKIVVENDRAIGVKLRSGQFVHAKKAVVSNASMWDTLKLLPQEVVPKSYSNRINTTSQCESFMHLHLGFDAEGIRSDLGIHHIVVNDWERGVDADQNVVLISVPSVLTPNLAPTGKHVLHAYLPGTEPFELWEGLDRKSAEYRNLKAQRSEIMWRAVERAVGPGFSREKCEVKLVGSPLTHQRFLRRNRGTYGPAIQAGTDTFPGHSTPIPHLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSQLLDAIGI*