AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0821030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0821030 MtrunA17_Chr5g0441201 96.341 492 17 1 1 492 1 491 0.0 947
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0821030 AT5G19500.1 77.372 411 85 3 88 491 91 500 0.0 604
Msa0821030 AT2G33260.2 25.102 490 300 13 35 475 60 531 3.87e-31 126
Msa0821030 AT2G33260.1 26.241 423 257 11 102 475 11 427 2.03e-27 114

Find 104 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACTTATACTCTCTTTAT+TGG 0.117288 5_3:+58770376 Msa0821030:CDS
TAAATTTCATCCAATATTTA+AGG 0.148372 5_3:-58771080 None:intergenic
AAACAGTGTAAAGTTATTTA+AGG 0.149158 5_3:+58770982 Msa0821030:three_prime_UTR
ATCTTACATTGGATTTGTTT+TGG 0.161342 5_3:+58769691 Msa0821030:CDS
CTTCCTCCTGGAACTATTTC+AGG 0.169530 5_3:-58770793 None:intergenic
AAACTTTGTTCCTTAAATAT+TGG 0.215235 5_3:+58771070 Msa0821030:three_prime_UTR
CACTTATTCTGTTCCTAGTT+TGG 0.216924 5_3:+58769442 Msa0821030:CDS
CATTGGAGCTGCTTGGAAAT+TGG 0.242103 5_3:-58769104 None:intergenic
TCTTTAAAGTGGCTTGATTA+AGG 0.258605 5_3:-58765781 None:intergenic
CTAATGGTTCTTGGTTGTTC+AGG 0.261901 5_3:+58770826 Msa0821030:CDS
TACTGTCCCTAAAGTTCTTC+TGG 0.295009 5_3:-58767591 None:intergenic
CGCTTTATTGGTGCAATTAA+CGG 0.312108 5_3:+58768337 Msa0821030:CDS
GCTTTATTGGTGCAATTAAC+GGG 0.319160 5_3:+58768338 Msa0821030:CDS
TCAATGGCCAGAAGAACTTT+AGG 0.325642 5_3:+58767584 Msa0821030:CDS
TTTAAAGCCTTGGACTTTGC+TGG 0.326378 5_3:+58770413 Msa0821030:CDS
TTGGACTTTGCTGGAACATA+TGG 0.347713 5_3:+58770422 Msa0821030:CDS
CATAGTAGTTGTGTCTTCCT+TGG 0.350883 5_3:-58765566 None:intergenic
ATAACCCTACTAATGGTTCT+TGG 0.355239 5_3:+58770817 Msa0821030:CDS
AACAGTGTAAAGTTATTTAA+GGG 0.356671 5_3:+58770983 Msa0821030:three_prime_UTR
CGCACTCTCATTTGTTTACC+AGG 0.361529 5_3:+58769141 Msa0821030:CDS
ACAAATGAGAGTGCGATAAT+TGG 0.362712 5_3:-58769133 None:intergenic
AGATCTTCAAATGGAACAAT+TGG 0.371731 5_3:+58769528 Msa0821030:CDS
ACAAACAGAAACAAACAAAA+AGG 0.374448 5_3:-58770932 None:intergenic
TGTATGGAAGTGGCCTGTTT+TGG 0.374979 5_3:-58770337 None:intergenic
AAACTACCTGAAATAGTTCC+AGG 0.375276 5_3:+58770787 Msa0821030:CDS
CAGTAGGAGTTCAAATTTCA+TGG 0.400109 5_3:+58767609 Msa0821030:CDS
ATATGTAGCCAGCGCTTTAT+TGG 0.403549 5_3:+58768325 Msa0821030:intron
GAAGATCTCAACTGTTGTAA+TGG 0.406888 5_3:-58769513 None:intergenic
AAGGAGACTTGTTAAAAGTA+AGG 0.407800 5_3:+58769270 Msa0821030:CDS
GTTCTTTGTACAAATCTTGA+AGG 0.411816 5_3:+58769251 Msa0821030:CDS
ATTAACGGGGTTCTAGTAGT+TGG 0.418435 5_3:+58768352 Msa0821030:CDS
ATCTGAAGAACGAGCTATAT+AGG 0.422804 5_3:-58767915 None:intergenic
TCAAGATTTGTACAAAGAAC+AGG 0.422918 5_3:-58769248 None:intergenic
GGAACTAAAGTCAGTATGTA+TGG 0.423140 5_3:-58770353 None:intergenic
CCTGCAGTGACACAAGAATC+AGG 0.423818 5_3:+58766920 Msa0821030:CDS
CGGCTCTGGCGGTGTATCAT+TGG 0.428881 5_3:+58767179 Msa0821030:CDS
TGCAAGTGGAAACCTGCATT+TGG 0.434164 5_3:+58769066 Msa0821030:CDS
AGTGAGAATATCTCAACTAT+AGG 0.436796 5_3:-58769653 None:intergenic
GCGATAATTGGTATACTCAT+TGG 0.437500 5_3:-58769121 None:intergenic
ATCTCCCAACAGGCCAAAAC+AGG 0.442842 5_3:+58770324 Msa0821030:CDS
GAAGGTCAATAGAAACAGAT+TGG 0.449338 5_3:-58771047 None:intergenic
CAATGGCCAGAAGAACTTTA+GGG 0.450193 5_3:+58767585 Msa0821030:CDS
TCAATCTATCCAAGAAGAAA+AGG 0.452158 5_3:+58765697 Msa0821030:CDS
GAAATATTGCAGGTAGGTGC+AGG 0.453044 5_3:+58766884 Msa0821030:intron
GATTGTCACCAACAGTTCCT+AGG 0.453386 5_3:-58769476 None:intergenic
CTGCAATGTCTTGGTCAGAT+AGG 0.453502 5_3:+58770740 Msa0821030:CDS
GAAGACACAACTACTATGTA+AGG 0.458123 5_3:+58765571 Msa0821030:CDS
TTTGGAGGCATATGCTACTT+TGG 0.460980 5_3:+58768082 Msa0821030:CDS
GTTTGGAATGGTGTTATCCT+AGG 0.466536 5_3:+58769459 Msa0821030:CDS
AACAACCAAGAACCATTAGT+AGG 0.469226 5_3:-58770822 None:intergenic
AGTAGGGTTATCCTTCCTCC+TGG 0.469240 5_3:-58770805 None:intergenic
AGATTATGTCCAGGTATCAA+TGG 0.471981 5_3:+58767568 Msa0821030:intron
ATTTAAGGAACAAAGTTTGA+AGG 0.474256 5_3:-58771065 None:intergenic
GTCAACACCATGTGTGATCT+CGG 0.477231 5_3:+58767159 Msa0821030:CDS
GGATAACACCATTCCAAACT+AGG 0.477436 5_3:-58769455 None:intergenic
TCAGTGCTGAATCTCCCAAC+AGG 0.479405 5_3:+58770314 Msa0821030:intron
GAGGCATATGCTACTTTGGA+AGG 0.486837 5_3:+58768086 Msa0821030:CDS
GTATACTCATTGGAGCTGCT+TGG 0.490266 5_3:-58769111 None:intergenic
ACCATGTGTGATCTCGGCTC+TGG 0.490461 5_3:+58767165 Msa0821030:CDS
TCCAATAAAGAGAGTATAAG+TGG 0.490812 5_3:-58770377 None:intergenic
AGGAAGGATAACCCTACTAA+TGG 0.492382 5_3:+58770810 Msa0821030:CDS
TTAAAAGAGCATCCAAATGC+AGG 0.494323 5_3:-58769078 None:intergenic
ATTCTGTTCCTAGTTTGGAA+TGG 0.494543 5_3:+58769447 Msa0821030:CDS
AAATTTGGAATATGAAAGAA+TGG 0.496313 5_3:-58765533 None:intergenic
GAAATCCTGCAGGTTGTGAC+AGG 0.502128 5_3:+58767114 Msa0821030:intron
TTATTCCAGCTGCAATGTCT+TGG 0.502595 5_3:+58770731 Msa0821030:CDS
ACCAGGTTCTCTCTTTAAAG+TGG 0.513763 5_3:-58765792 None:intergenic
CCTGATTCTTGTGTCACTGC+AGG 0.516721 5_3:-58766920 None:intergenic
TGTAATGGATCTAATCCCAT+TGG 0.516758 5_3:-58769498 None:intergenic
CAACAGTTGAGATCTTCAAA+TGG 0.523385 5_3:+58769519 Msa0821030:CDS
CAAACTAGGAACAGAATAAG+TGG 0.525691 5_3:-58769441 None:intergenic
CTGAAATAGTTCCAGGAGGA+AGG 0.527976 5_3:+58770794 Msa0821030:CDS
AGGCAATCAGAAGGGCGTAA+TGG 0.529231 5_3:-58767895 None:intergenic
GCAATTGCTACATCTTACAT+TGG 0.529299 5_3:+58769680 Msa0821030:CDS
AAAGTCAGTATGTATGGAAG+TGG 0.537228 5_3:-58770347 None:intergenic
GCCACTTTAAAGAGAGAACC+TGG 0.543559 5_3:+58765791 Msa0821030:CDS
GTTCTAGTAGTTGGAATCAT+CGG 0.544435 5_3:+58768361 Msa0821030:CDS
TCTGACCAAGACATTGCAGC+TGG 0.549499 5_3:-58770736 None:intergenic
AGAAGAACTTTAGGGACAGT+AGG 0.553655 5_3:+58767593 Msa0821030:CDS
ACTGTTGGTGACAATCCAAT+GGG 0.561349 5_3:+58769483 Msa0821030:CDS
AACTGTTGGTGACAATCCAA+TGG 0.566366 5_3:+58769482 Msa0821030:CDS
GACTTTGCTGGAACATATGG+AGG 0.569015 5_3:+58770425 Msa0821030:CDS
TTTCCTGGTTGCAGGCACTA+CGG 0.571197 5_3:+58765965 Msa0821030:CDS
ACAGTGTAAAGTTATTTAAG+GGG 0.575409 5_3:+58770984 Msa0821030:three_prime_UTR
TGCAGGAGTGCAATAATACT+AGG 0.575731 5_3:+58769408 Msa0821030:intron
TATAATACATACAGTCTGCA+AGG 0.577013 5_3:-58769727 None:intergenic
AGAAGGAAGATACAAAGAAG+AGG 0.582114 5_3:-58765624 None:intergenic
AAACCGTAGTGCCTGCAACC+AGG 0.585575 5_3:-58765968 None:intergenic
CAGTGTAAAGTTATTTAAGG+GGG 0.592473 5_3:+58770985 Msa0821030:three_prime_UTR
GGTGTTATCCTAGGAACTGT+TGG 0.594469 5_3:+58769468 Msa0821030:CDS
AAATATTGCAGGTAGGTGCA+GGG 0.597429 5_3:+58766885 Msa0821030:intron
GAGCTATATAGGCAATCAGA+AGG 0.598567 5_3:-58767904 None:intergenic
CTATATTAGACAGTTGCAAG+TGG 0.602825 5_3:+58769052 Msa0821030:intron
AGTGCAATAATACTAGGCAC+TGG 0.606834 5_3:+58769414 Msa0821030:CDS
ACAACCAAGAACCATTAGTA+GGG 0.608420 5_3:-58770821 None:intergenic
ATGTGTGATCTCGGCTCTGG+CGG 0.610785 5_3:+58767168 Msa0821030:CDS
TAATTGCACCAATAAAGCGC+TGG 0.615874 5_3:-58768333 None:intergenic
CTTTATTGGTGCAATTAACG+GGG 0.618716 5_3:+58768339 Msa0821030:CDS
ATATGTTCCAGCAAAGTCCA+AGG 0.621878 5_3:-58770420 None:intergenic
GCCAGAGCCGAGATCACACA+TGG 0.623234 5_3:-58767166 None:intergenic
GTTGTGAGAAACATTTGTGA+AGG 0.625827 5_3:-58765664 None:intergenic
AATAAAGAGAGTATAAGTGG+TGG 0.637112 5_3:-58770374 None:intergenic
AGCTATATAGGCAATCAGAA+GGG 0.643728 5_3:-58767903 None:intergenic
CTACCTGAAATAGTTCCAGG+AGG 0.717690 5_3:+58770790 Msa0821030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTAAAATGTAAATAAAG+TGG - chr5_3:58766122-58766141 None:intergenic 10.0%
!!! CTATTTTCAAATTTTAAAAT+AGG + chr5_3:58768461-58768480 Msa0821030:intron 10.0%
!!! TCTTAAAAAAATGATTAGTT+TGG + chr5_3:58766225-58766244 Msa0821030:intron 15.0%
!!! TAGATATTTAGAGATATTTT+AGG - chr5_3:58767350-58767369 None:intergenic 15.0%
!! TTACTAATACTAATCTAAAT+AGG - chr5_3:58767540-58767559 None:intergenic 15.0%
!! GAAAATTAAGACATAATTTA+AGG - chr5_3:58767989-58768008 None:intergenic 15.0%
!! TTTGTAAAAAAAACATATTG+CGG + chr5_3:58769983-58770002 Msa0821030:intron 15.0%
!! TAAATTTCATCCAATATTTA+AGG - chr5_3:58771083-58771102 None:intergenic 15.0%
!!! AAATTTGGAATATGAAAGAA+TGG - chr5_3:58765536-58765555 None:intergenic 20.0%
!!! TTTTTTCTATTCATAGAAGA+AGG - chr5_3:58765644-58765663 None:intergenic 20.0%
!! GATAAATATAAGAGAAAAAG+AGG - chr5_3:58765839-58765858 None:intergenic 20.0%
!! ACTTATAAGTTGTAAAGAAA+TGG + chr5_3:58766438-58766457 Msa0821030:intron 20.0%
!! GAATTACATTCAAATGAAAA+GGG - chr5_3:58766737-58766756 None:intergenic 20.0%
!! TGAATTACATTCAAATGAAA+AGG - chr5_3:58766738-58766757 None:intergenic 20.0%
!! TTTCATTTGAATGTAATTCA+AGG + chr5_3:58766738-58766757 Msa0821030:intron 20.0%
!!! TTATATTAATTTTTCAGCAG+AGG - chr5_3:58767077-58767096 None:intergenic 20.0%
!!! AGATATTTTAGGAACTAATA+TGG - chr5_3:58767339-58767358 None:intergenic 20.0%
!!! TTTTCAATTATGCAATAGTT+AGG + chr5_3:58767764-58767783 Msa0821030:intron 20.0%
!! TTTCAATTATGCAATAGTTA+GGG + chr5_3:58767765-58767784 Msa0821030:intron 20.0%
!!! TAATTTTCATATACTTTGTC+AGG + chr5_3:58768001-58768020 Msa0821030:intron 20.0%
!!! CTATTTTCCTAAATTATTAC+CGG - chr5_3:58768193-58768212 None:intergenic 20.0%
!!! AATACGTCTAATTTTTGTTT+AGG - chr5_3:58768588-58768607 None:intergenic 20.0%
!! AAACAAAAATTAGACGTATT+CGG + chr5_3:58768588-58768607 Msa0821030:intron 20.0%
!! TAATCTAAATCAATCTGATT+TGG - chr5_3:58768827-58768846 None:intergenic 20.0%
!! TTAGATTAGACGTTTAATAT+TGG + chr5_3:58768839-58768858 Msa0821030:intron 20.0%
!! TACGATAATGAAATATTACA+TGG + chr5_3:58768962-58768981 Msa0821030:intron 20.0%
!! TAAATAGTCATGAAACTTTA+AGG - chr5_3:58769596-58769615 None:intergenic 20.0%
!! TCAAAAGATAAGAAAGAAAT+TGG - chr5_3:58769757-58769776 None:intergenic 20.0%
!!! AGGCTTTAAAAAATATTTCA+GGG - chr5_3:58770403-58770422 None:intergenic 20.0%
!!! AAGGCTTTAAAAAATATTTC+AGG - chr5_3:58770404-58770423 None:intergenic 20.0%
!!! TGAAATATTTTTTAAAGCCT+TGG + chr5_3:58770403-58770422 Msa0821030:CDS 20.0%
!! AACTAAAATTAACATGGAAA+TGG - chr5_3:58770475-58770494 None:intergenic 20.0%
!! AATTGCAACTAAAATTAACA+TGG - chr5_3:58770481-58770500 None:intergenic 20.0%
!! TCTATGAGATAAATAAACTT+AGG + chr5_3:58770558-58770577 Msa0821030:intron 20.0%
!!! ATATTTGTTTCTTGAAAACT+TGG + chr5_3:58770657-58770676 Msa0821030:intron 20.0%
!!! AATGATGAATACTTTTTCAA+AGG - chr5_3:58770891-58770910 None:intergenic 20.0%
!!! AAAGTATTCATCATTTTACA+TGG + chr5_3:58770896-58770915 Msa0821030:three_prime_UTR 20.0%
!! AAACAGTGTAAAGTTATTTA+AGG + chr5_3:58770982-58771001 Msa0821030:three_prime_UTR 20.0%
!! AACAGTGTAAAGTTATTTAA+GGG + chr5_3:58770983-58771002 Msa0821030:three_prime_UTR 20.0%
!! AAACTTTGTTCCTTAAATAT+TGG + chr5_3:58771070-58771089 Msa0821030:three_prime_UTR 20.0%
! GAGCTACAAAAACATATAAA+TGG + chr5_3:58765481-58765500 Msa0821030:exon 25.0%
!! CTTGGTTTGATCAAAAAATT+TGG - chr5_3:58765551-58765570 None:intergenic 25.0%
!!! CAAATTTTTTGATCAAACCA+AGG + chr5_3:58765549-58765568 Msa0821030:CDS 25.0%
!!! ACTTGTGTTTTAACATTAAC+AGG + chr5_3:58765924-58765943 Msa0821030:intron 25.0%
! CATATGAAATTGCAATACAT+AGG - chr5_3:58766075-58766094 None:intergenic 25.0%
! TATAAGTTGTAAAGAAATGG+AGG + chr5_3:58766441-58766460 Msa0821030:intron 25.0%
! ATAAGTTGTAAAGAAATGGA+GGG + chr5_3:58766442-58766461 Msa0821030:intron 25.0%
!!! AGTTACTTGCATTTTTTGTT+GGG + chr5_3:58766958-58766977 Msa0821030:CDS 25.0%
!! ATTATTTCTTAACTCCCTAA+AGG + chr5_3:58767204-58767223 Msa0821030:intron 25.0%
!!! ATTTTAGTATCGTTCCTTTA+GGG - chr5_3:58767221-58767240 None:intergenic 25.0%
! ACTAATCTAAATAGGTAGAA+TGG - chr5_3:58767532-58767551 None:intergenic 25.0%
! ATTTAATGCAAGCAAACTAT+TGG + chr5_3:58767656-58767675 Msa0821030:intron 25.0%
!!! GCTTTGTTTTCATTGATTTT+TGG + chr5_3:58768064-58768083 Msa0821030:CDS 25.0%
!!! TTGTTTTCATTGATTTTTGG+AGG + chr5_3:58768067-58768086 Msa0821030:CDS 25.0%
! AGTAAACTTCATATGATCTT+TGG + chr5_3:58768509-58768528 Msa0821030:intron 25.0%
! GGATAACATGTTCTTATAAA+TGG + chr5_3:58768609-58768628 Msa0821030:intron 25.0%
! GCAAAATCACAAATAACAAA+TGG + chr5_3:58768704-58768723 Msa0821030:intron 25.0%
! ATTTCAAACAAGTTATCCAT+TGG - chr5_3:58768901-58768920 None:intergenic 25.0%
! ATATATGCTTATTCAGAATG+TGG + chr5_3:58769223-58769242 Msa0821030:intron 25.0%
! AGTCGATAAAATTGAAATGA+TGG - chr5_3:58769346-58769365 None:intergenic 25.0%
!!! AATGTTTTTTGTTTTGTTGC+AGG + chr5_3:58769391-58769410 Msa0821030:intron 25.0%
!!! ATCTTACATTGGATTTGTTT+TGG + chr5_3:58769691-58769710 Msa0821030:CDS 25.0%
!!! TCTTACATTGGATTTGTTTT+GGG + chr5_3:58769692-58769711 Msa0821030:CDS 25.0%
!!! TCTTTTGATTAAAGCTAATG+CGG + chr5_3:58769769-58769788 Msa0821030:intron 25.0%
! TCCATTCTTAACTAAAGTTT+AGG + chr5_3:58770628-58770647 Msa0821030:intron 25.0%
! ACCTAAACTTTAGTTAAGAA+TGG - chr5_3:58770632-58770651 None:intergenic 25.0%
! ACAAACAGAAACAAACAAAA+AGG - chr5_3:58770935-58770954 None:intergenic 25.0%
! ACAGTGTAAAGTTATTTAAG+GGG + chr5_3:58770984-58771003 Msa0821030:three_prime_UTR 25.0%
! ATTTAAGGAACAAAGTTTGA+AGG - chr5_3:58771068-58771087 None:intergenic 25.0%
TCAATCTATCCAAGAAGAAA+AGG + chr5_3:58765697-58765716 Msa0821030:CDS 30.0%
!! TCTTTAAAGTGGCTTGATTA+AGG - chr5_3:58765784-58765803 None:intergenic 30.0%
AGAAAAAGAAAGAGCAAAAG+TGG - chr5_3:58765995-58766014 None:intergenic 30.0%
AAATGACACTTATTGTGAGA+CGG - chr5_3:58766190-58766209 None:intergenic 30.0%
!!! CTCACAATAAGTGTCATTTT+AGG + chr5_3:58766191-58766210 Msa0821030:intron 30.0%
!!! TTTCGACTTTTTCGTAATTG+CGG + chr5_3:58766806-58766825 Msa0821030:intron 30.0%
TTAGCATTTGAGTGAAATGA+TGG - chr5_3:58766864-58766883 None:intergenic 30.0%
CAAATGCTAAGAAATATTGC+AGG + chr5_3:58766874-58766893 Msa0821030:intron 30.0%
!!! CAGTTACTTGCATTTTTTGT+TGG + chr5_3:58766957-58766976 Msa0821030:CDS 30.0%
TTGTAAGAAGCAAAATCATG+AGG - chr5_3:58767005-58767024 None:intergenic 30.0%
!! GATTTTAGTATCGTTCCTTT+AGG - chr5_3:58767222-58767241 None:intergenic 30.0%
!!! TATTCTCATAACTTTTTCGC+TGG - chr5_3:58767244-58767263 None:intergenic 30.0%
TAGGAACTAATATGGTAAAG+TGG - chr5_3:58767331-58767350 None:intergenic 30.0%
TCTAAATAGGTAGAATGGAA+AGG - chr5_3:58767527-58767546 None:intergenic 30.0%
ACTTGATTTAGATTATGTCC+AGG + chr5_3:58767559-58767578 Msa0821030:intron 30.0%
! CACTTTGATTTAAGAGAAAC+GGG - chr5_3:58767733-58767752 None:intergenic 30.0%
! CCACTTTGATTTAAGAGAAA+CGG - chr5_3:58767734-58767753 None:intergenic 30.0%
! GATATCTTGACGAATTTTCT+TGG + chr5_3:58767935-58767954 Msa0821030:CDS 30.0%
! ATAATTTAAGGCCTAGTTAG+TGG - chr5_3:58767977-58767996 None:intergenic 30.0%
! TTTTCATATACTTTGTCAGG+AGG + chr5_3:58768004-58768023 Msa0821030:intron 30.0%
TCACAGATATATAGCCATAT+AGG + chr5_3:58768559-58768578 Msa0821030:intron 30.0%
AACATGTTCTTATAAATGGC+AGG + chr5_3:58768613-58768632 Msa0821030:intron 30.0%
AGATAACATGCTCCAAATAA+AGG + chr5_3:58768649-58768668 Msa0821030:intron 30.0%
!! GAATCCTATTAGCCTTTATT+TGG - chr5_3:58768664-58768683 None:intergenic 30.0%
TACACACAATAAACAATCTC+AGG + chr5_3:58768762-58768781 Msa0821030:intron 30.0%
TGTTCAAAGATTGGAGATTA+AGG - chr5_3:58769173-58769192 None:intergenic 30.0%
AATCTCCAATCTTTGAACAA+CGG + chr5_3:58769174-58769193 Msa0821030:intron 30.0%
TCAAGATTTGTACAAAGAAC+AGG - chr5_3:58769251-58769270 None:intergenic 30.0%
GTTCTTTGTACAAATCTTGA+AGG + chr5_3:58769251-58769270 Msa0821030:CDS 30.0%
!! AAGGAGACTTGTTAAAAGTA+AGG + chr5_3:58769270-58769289 Msa0821030:CDS 30.0%
AGATCTTCAAATGGAACAAT+TGG + chr5_3:58769528-58769547 Msa0821030:CDS 30.0%
CAGTAGTAGCTAAAAGAAAA+AGG - chr5_3:58769573-58769592 None:intergenic 30.0%
AGTGAGAATATCTCAACTAT+AGG - chr5_3:58769656-58769675 None:intergenic 30.0%
TATAATACATACAGTCTGCA+AGG - chr5_3:58769730-58769749 None:intergenic 30.0%
TTAGTTATTAAGCATGCTAG+AGG - chr5_3:58770117-58770136 None:intergenic 30.0%
!! TGTTGCACATTTTAAAGACT+AGG + chr5_3:58770140-58770159 Msa0821030:intron 30.0%
ATGAACAATGCTTCATTTGT+TGG + chr5_3:58770227-58770246 Msa0821030:intron 30.0%
! AATAAAGAGAGTATAAGTGG+TGG - chr5_3:58770377-58770396 None:intergenic 30.0%
ACCACTTATACTCTCTTTAT+TGG + chr5_3:58770376-58770395 Msa0821030:CDS 30.0%
! TCCAATAAAGAGAGTATAAG+TGG - chr5_3:58770380-58770399 None:intergenic 30.0%
TTTATCTCATAGACAAACTC+CGG - chr5_3:58770551-58770570 None:intergenic 30.0%
TAGTTAAGAATGGATCGTTT+AGG - chr5_3:58770622-58770641 None:intergenic 30.0%
CAGTGTAAAGTTATTTAAGG+GGG + chr5_3:58770985-58771004 Msa0821030:three_prime_UTR 30.0%
GAAGACACAACTACTATGTA+AGG + chr5_3:58765571-58765590 Msa0821030:CDS 35.0%
AGAAGGAAGATACAAAGAAG+AGG - chr5_3:58765627-58765646 None:intergenic 35.0%
GTTGTGAGAAACATTTGTGA+AGG - chr5_3:58765667-58765686 None:intergenic 35.0%
! CTTCATCATCCTTTTCTTCT+TGG - chr5_3:58765709-58765728 None:intergenic 35.0%
AAAATAGCAATGCACTAACC+AGG - chr5_3:58765812-58765831 None:intergenic 35.0%
! CTTATCTAGTGCAATTTTCC+TGG + chr5_3:58765950-58765969 Msa0821030:CDS 35.0%
TGCTTATATAAGCCTGTTCA+TGG + chr5_3:58766093-58766112 Msa0821030:intron 35.0%
ATAAAGTGGTTTCCATGAAC+AGG - chr5_3:58766108-58766127 None:intergenic 35.0%
AGTAAGAGTAGTGCTATAGT+TGG + chr5_3:58766308-58766327 Msa0821030:intron 35.0%
AGTGTTTATCAGACTATGCA+GGG + chr5_3:58766488-58766507 Msa0821030:intron 35.0%
TCCGATATCGATATCTTATG+CGG + chr5_3:58766643-58766662 Msa0821030:intron 35.0%
ACCGCATAAGATATCGATAT+CGG - chr5_3:58766647-58766666 None:intergenic 35.0%
TGCTAAGAAATATTGCAGGT+AGG + chr5_3:58766878-58766897 Msa0821030:intron 35.0%
!!! CATTTTTTGTTGGGCATTCA+TGG + chr5_3:58766967-58766986 Msa0821030:CDS 35.0%
AATATGGTAAAGTGGCATCA+TGG - chr5_3:58767323-58767342 None:intergenic 35.0%
! CACTTGTGCATTCTATCTTT+TGG + chr5_3:58767476-58767495 Msa0821030:intron 35.0%
AGATTATGTCCAGGTATCAA+TGG + chr5_3:58767568-58767587 Msa0821030:intron 35.0%
CAGTAGGAGTTCAAATTTCA+TGG + chr5_3:58767609-58767628 Msa0821030:CDS 35.0%
TCAACATGCGTAACATAACA+CGG + chr5_3:58767682-58767701 Msa0821030:intron 35.0%
CCGTTTCTCTTAAATCAAAG+TGG + chr5_3:58767731-58767750 Msa0821030:intron 35.0%
! CAATGTGATTTTGTTGCAGT+TGG + chr5_3:58767858-58767877 Msa0821030:intron 35.0%
AGCTATATAGGCAATCAGAA+GGG - chr5_3:58767906-58767925 None:intergenic 35.0%
ATCTGAAGAACGAGCTATAT+AGG - chr5_3:58767918-58767937 None:intergenic 35.0%
GAAGACACCGGTAATAATTT+AGG + chr5_3:58768183-58768202 Msa0821030:intron 35.0%
!! AAAGTATTGTCAGTTAGAGC+TGG - chr5_3:58768299-58768318 None:intergenic 35.0%
! CGCTTTATTGGTGCAATTAA+CGG + chr5_3:58768337-58768356 Msa0821030:CDS 35.0%
! GCTTTATTGGTGCAATTAAC+GGG + chr5_3:58768338-58768357 Msa0821030:CDS 35.0%
CTTTATTGGTGCAATTAACG+GGG + chr5_3:58768339-58768358 Msa0821030:CDS 35.0%
GTTCTAGTAGTTGGAATCAT+CGG + chr5_3:58768361-58768380 Msa0821030:CDS 35.0%
!! TTTTGTTTAGGCGTCCTATA+TGG - chr5_3:58768576-58768595 None:intergenic 35.0%
TGCTCCAAATAAAGGCTAAT+AGG + chr5_3:58768657-58768676 Msa0821030:intron 35.0%
CTATATTAGACAGTTGCAAG+TGG + chr5_3:58769052-58769071 Msa0821030:intron 35.0%
!! TTAAAAGAGCATCCAAATGC+AGG - chr5_3:58769081-58769100 None:intergenic 35.0%
GCGATAATTGGTATACTCAT+TGG - chr5_3:58769124-58769143 None:intergenic 35.0%
! ACAAATGAGAGTGCGATAAT+TGG - chr5_3:58769136-58769155 None:intergenic 35.0%
TTTGTCCGTTGTTCAAAGAT+TGG - chr5_3:58769182-58769201 None:intergenic 35.0%
CAAACTAGGAACAGAATAAG+TGG - chr5_3:58769444-58769463 None:intergenic 35.0%
CACTTATTCTGTTCCTAGTT+TGG + chr5_3:58769442-58769461 Msa0821030:CDS 35.0%
ATTCTGTTCCTAGTTTGGAA+TGG + chr5_3:58769447-58769466 Msa0821030:CDS 35.0%
!! TGTAATGGATCTAATCCCAT+TGG - chr5_3:58769501-58769520 None:intergenic 35.0%
GAAGATCTCAACTGTTGTAA+TGG - chr5_3:58769516-58769535 None:intergenic 35.0%
CAACAGTTGAGATCTTCAAA+TGG + chr5_3:58769519-58769538 Msa0821030:CDS 35.0%
AGGCTGCAGAATCAAATTAA+GGG - chr5_3:58769636-58769655 None:intergenic 35.0%
TAGGCTGCAGAATCAAATTA+AGG - chr5_3:58769637-58769656 None:intergenic 35.0%
GCAATTGCTACATCTTACAT+TGG + chr5_3:58769680-58769699 Msa0821030:CDS 35.0%
TAAGATGATAAGACACATGC+TGG - chr5_3:58769883-58769902 None:intergenic 35.0%
TTATGCAGTGTTGTCAAATG+CGG + chr5_3:58769900-58769919 Msa0821030:intron 35.0%
AAAAACATATTGCGGAACGA+TGG + chr5_3:58769991-58770010 Msa0821030:intron 35.0%
AGCCTAATGTTGTCAAATAG+CGG - chr5_3:58770076-58770095 None:intergenic 35.0%
! ATTAAGCATGCTAGAGGTAT+AGG - chr5_3:58770111-58770130 None:intergenic 35.0%
AAAGTCAGTATGTATGGAAG+TGG - chr5_3:58770350-58770369 None:intergenic 35.0%
GGAACTAAAGTCAGTATGTA+TGG - chr5_3:58770356-58770375 None:intergenic 35.0%
! GAAAATTCGAGTTCGAATTC+AGG - chr5_3:58770600-58770619 None:intergenic 35.0%
AAACTACCTGAAATAGTTCC+AGG + chr5_3:58770787-58770806 Msa0821030:CDS 35.0%
ATAACCCTACTAATGGTTCT+TGG + chr5_3:58770817-58770836 Msa0821030:CDS 35.0%
ACAACCAAGAACCATTAGTA+GGG - chr5_3:58770824-58770843 None:intergenic 35.0%
AACAACCAAGAACCATTAGT+AGG - chr5_3:58770825-58770844 None:intergenic 35.0%
!!! AGGGGGTATTTTAGAGAAAA+TGG + chr5_3:58771002-58771021 Msa0821030:three_prime_UTR 35.0%
GAAGGTCAATAGAAACAGAT+TGG - chr5_3:58771050-58771069 None:intergenic 35.0%
CATAGTAGTTGTGTCTTCCT+TGG - chr5_3:58765569-58765588 None:intergenic 40.0%
! ACCAGGTTCTCTCTTTAAAG+TGG - chr5_3:58765795-58765814 None:intergenic 40.0%
TAGTCTGATAAACACTGCTC+AGG - chr5_3:58766484-58766503 None:intergenic 40.0%
CAGTGTTTATCAGACTATGC+AGG + chr5_3:58766487-58766506 Msa0821030:intron 40.0%
GTTGAGTACACTTCAGATGA+AGG + chr5_3:58766510-58766529 Msa0821030:intron 40.0%
!! GAAGGCGTATTTGTTGTTTG+AGG + chr5_3:58766528-58766547 Msa0821030:intron 40.0%
! ATGATGCACTGACACAAACA+TGG - chr5_3:58766672-58766691 None:intergenic 40.0%
AATGCATAGCTGCAAAACGT+GGG + chr5_3:58766778-58766797 Msa0821030:intron 40.0%
AAATATTGCAGGTAGGTGCA+GGG + chr5_3:58766885-58766904 Msa0821030:intron 40.0%
TCAATGGCCAGAAGAACTTT+AGG + chr5_3:58767584-58767603 Msa0821030:CDS 40.0%
CAATGGCCAGAAGAACTTTA+GGG + chr5_3:58767585-58767604 Msa0821030:CDS 40.0%
TACTGTCCCTAAAGTTCTTC+TGG - chr5_3:58767594-58767613 None:intergenic 40.0%
! AGAAGAACTTTAGGGACAGT+AGG + chr5_3:58767593-58767612 Msa0821030:CDS 40.0%
TTAAGAGAAACGGGAACAAC+TGG - chr5_3:58767724-58767743 None:intergenic 40.0%
TGCAATAGTTAGGGTTACAG+AGG + chr5_3:58767774-58767793 Msa0821030:intron 40.0%
GCAATAGTTAGGGTTACAGA+GGG + chr5_3:58767775-58767794 Msa0821030:intron 40.0%
GAGCTATATAGGCAATCAGA+AGG - chr5_3:58767907-58767926 None:intergenic 40.0%
! CTAGTTAGTGGCTTGTACAT+GGG - chr5_3:58767965-58767984 None:intergenic 40.0%
! TTTGGAGGCATATGCTACTT+TGG + chr5_3:58768082-58768101 Msa0821030:CDS 40.0%
TTGAATGTAAGCACGTGCTT+CGG + chr5_3:58768219-58768238 Msa0821030:intron 40.0%
CTCTAGTCTCTCACACATAA+TGG - chr5_3:58768252-58768271 None:intergenic 40.0%
ATATGTAGCCAGCGCTTTAT+TGG + chr5_3:58768325-58768344 Msa0821030:intron 40.0%
TAATTGCACCAATAAAGCGC+TGG - chr5_3:58768336-58768355 None:intergenic 40.0%
! ATTAACGGGGTTCTAGTAGT+TGG + chr5_3:58768352-58768371 Msa0821030:CDS 40.0%
TGCATGGAATCTGTTTCCAA+TGG + chr5_3:58768882-58768901 Msa0821030:intron 40.0%
CGTTTCTCTTTCATGCTACA+CGG + chr5_3:58768926-58768945 Msa0821030:intron 40.0%
TGGAGATTAAGGAAGTTACC+TGG - chr5_3:58769162-58769181 None:intergenic 40.0%
! TGCAGGAGTGCAATAATACT+AGG + chr5_3:58769408-58769427 Msa0821030:intron 40.0%
AGTGCAATAATACTAGGCAC+TGG + chr5_3:58769414-58769433 Msa0821030:CDS 40.0%
GGATAACACCATTCCAAACT+AGG - chr5_3:58769458-58769477 None:intergenic 40.0%
!! GTTTGGAATGGTGTTATCCT+AGG + chr5_3:58769459-58769478 Msa0821030:CDS 40.0%
!! AACTGTTGGTGACAATCCAA+TGG + chr5_3:58769482-58769501 Msa0821030:CDS 40.0%
!! ACTGTTGGTGACAATCCAAT+GGG + chr5_3:58769483-58769502 Msa0821030:CDS 40.0%
AATCTGCTCAAATACCACTG+TGG + chr5_3:58770015-58770034 Msa0821030:intron 40.0%
TCAAATACCACTGTGGTCTA+CGG + chr5_3:58770022-58770041 Msa0821030:intron 40.0%
AGCCGCTATTTGACAACATT+AGG + chr5_3:58770071-58770090 Msa0821030:intron 40.0%
! TTTAAAGCCTTGGACTTTGC+TGG + chr5_3:58770413-58770432 Msa0821030:CDS 40.0%
ATATGTTCCAGCAAAGTCCA+AGG - chr5_3:58770423-58770442 None:intergenic 40.0%
TTGGACTTTGCTGGAACATA+TGG + chr5_3:58770422-58770441 Msa0821030:CDS 40.0%
TTATTCCAGCTGCAATGTCT+TGG + chr5_3:58770731-58770750 Msa0821030:CDS 40.0%
AGGAAGGATAACCCTACTAA+TGG + chr5_3:58770810-58770829 Msa0821030:CDS 40.0%
CTAATGGTTCTTGGTTGTTC+AGG + chr5_3:58770826-58770845 Msa0821030:CDS 40.0%
! GCCACTTTAAAGAGAGAACC+TGG + chr5_3:58765791-58765810 Msa0821030:CDS 45.0%
! AGTGCAATTTTCCTGGTTGC+AGG + chr5_3:58765957-58765976 Msa0821030:CDS 45.0%
CAATGCATAGCTGCAAAACG+TGG + chr5_3:58766777-58766796 Msa0821030:intron 45.0%
GAAATATTGCAGGTAGGTGC+AGG + chr5_3:58766884-58766903 Msa0821030:intron 45.0%
CATCTGATGAGAAATCCTGC+AGG + chr5_3:58767104-58767123 Msa0821030:intron 45.0%
GTCAACACCATGTGTGATCT+CGG + chr5_3:58767159-58767178 Msa0821030:CDS 45.0%
TTCTTCTGGCCATTGATACC+TGG - chr5_3:58767580-58767599 None:intergenic 45.0%
! CCTAGTTAGTGGCTTGTACA+TGG - chr5_3:58767966-58767985 None:intergenic 45.0%
CCATGTACAAGCCACTAACT+AGG + chr5_3:58767963-58767982 Msa0821030:intron 45.0%
CTTTGTCAGGAGGCTAATAC+CGG + chr5_3:58768014-58768033 Msa0821030:intron 45.0%
!!! ACCGGCATTTTGGTTACAGA+TGG + chr5_3:58768032-58768051 Msa0821030:intron 45.0%
CCCATCTGTAACCAAAATGC+CGG - chr5_3:58768036-58768055 None:intergenic 45.0%
!!! CCGGCATTTTGGTTACAGAT+GGG + chr5_3:58768033-58768052 Msa0821030:intron 45.0%
!! GAGGCATATGCTACTTTGGA+AGG + chr5_3:58768086-58768105 Msa0821030:CDS 45.0%
TGCAAGTGGAAACCTGCATT+TGG + chr5_3:58769066-58769085 Msa0821030:CDS 45.0%
CATTGGAGCTGCTTGGAAAT+TGG - chr5_3:58769107-58769126 None:intergenic 45.0%
GTATACTCATTGGAGCTGCT+TGG - chr5_3:58769114-58769133 None:intergenic 45.0%
CGCACTCTCATTTGTTTACC+AGG + chr5_3:58769141-58769160 Msa0821030:CDS 45.0%
! GGTGTTATCCTAGGAACTGT+TGG + chr5_3:58769468-58769487 Msa0821030:CDS 45.0%
GATTGTCACCAACAGTTCCT+AGG - chr5_3:58769479-58769498 None:intergenic 45.0%
GTGTTGTCAAATGCGGATAG+CGG + chr5_3:58769907-58769926 Msa0821030:intron 45.0%
!! ATGCGGATAGCGGAAAATAG+CGG + chr5_3:58769917-58769936 Msa0821030:intron 45.0%
! TGTATGGAAGTGGCCTGTTT+TGG - chr5_3:58770340-58770359 None:intergenic 45.0%
TCCTTAACCCTCCAGTTTCT+TGG + chr5_3:58770506-58770525 Msa0821030:intron 45.0%
CCTTAACCCTCCAGTTTCTT+GGG + chr5_3:58770507-58770526 Msa0821030:intron 45.0%
CTTAACCCTCCAGTTTCTTG+GGG + chr5_3:58770508-58770527 Msa0821030:intron 45.0%
AGACAAACTCCGGATTCTCA+GGG - chr5_3:58770541-58770560 None:intergenic 45.0%
TAGACAAACTCCGGATTCTC+AGG - chr5_3:58770542-58770561 None:intergenic 45.0%
!!! CTGATAGTGCTGCTGCTTTT+CGG + chr5_3:58770706-58770725 Msa0821030:intron 45.0%
CTGCAATGTCTTGGTCAGAT+AGG + chr5_3:58770740-58770759 Msa0821030:CDS 45.0%
CTACCTGAAATAGTTCCAGG+AGG + chr5_3:58770790-58770809 Msa0821030:CDS 45.0%
CTTCCTCCTGGAACTATTTC+AGG - chr5_3:58770796-58770815 None:intergenic 45.0%
CTGAAATAGTTCCAGGAGGA+AGG + chr5_3:58770794-58770813 Msa0821030:CDS 45.0%
TTTCCTGGTTGCAGGCACTA+CGG + chr5_3:58765965-58765984 Msa0821030:CDS 50.0%
! CCTGATTCTTGTGTCACTGC+AGG - chr5_3:58766923-58766942 None:intergenic 50.0%
CCTGCAGTGACACAAGAATC+AGG + chr5_3:58766920-58766939 Msa0821030:CDS 50.0%
GAAATCCTGCAGGTTGTGAC+AGG + chr5_3:58767114-58767133 Msa0821030:intron 50.0%
AACACGGCTTCATCAGAGCT+CGG + chr5_3:58767698-58767717 Msa0821030:intron 50.0%
! AGGCAATCAGAAGGGCGTAA+TGG - chr5_3:58767898-58767917 None:intergenic 50.0%
! GGAGGCTAATACCGGCATTT+TGG + chr5_3:58768022-58768041 Msa0821030:intron 50.0%
TGACACTGACACGAAGACAC+CGG + chr5_3:58768171-58768190 Msa0821030:intron 50.0%
!!! CGGCTTTTTTGCAGCTCTTG+TGG + chr5_3:58768381-58768400 Msa0821030:CDS 50.0%
TGCGCGATGAAGTTACTGCA+TGG + chr5_3:58768866-58768885 Msa0821030:intron 50.0%
ATACCACTGTGGTCTACGGA+CGG + chr5_3:58770026-58770045 Msa0821030:intron 50.0%
! TCAGTGCTGAATCTCCCAAC+AGG + chr5_3:58770314-58770333 Msa0821030:intron 50.0%
ATCTCCCAACAGGCCAAAAC+AGG + chr5_3:58770324-58770343 Msa0821030:CDS 50.0%
CCCAAGAAACTGGAGGGTTA+AGG - chr5_3:58770510-58770529 None:intergenic 50.0%
TCCTTCCCCAAGAAACTGGA+GGG - chr5_3:58770516-58770535 None:intergenic 50.0%
TCTGACCAAGACATTGCAGC+TGG - chr5_3:58770739-58770758 None:intergenic 50.0%
AGTAGGGTTATCCTTCCTCC+TGG - chr5_3:58770808-58770827 None:intergenic 50.0%
AAACCGTAGTGCCTGCAACC+AGG - chr5_3:58765971-58765990 None:intergenic 55.0%
GCAAACCTGTCACAACCTGC+AGG - chr5_3:58767122-58767141 None:intergenic 55.0%
ACCATGTGTGATCTCGGCTC+TGG + chr5_3:58767165-58767184 Msa0821030:CDS 55.0%
! ATGTGTGATCTCGGCTCTGG+CGG + chr5_3:58767168-58767187 Msa0821030:CDS 55.0%
ATACCGTCCGTAGACCACAG+TGG - chr5_3:58770032-58770051 None:intergenic 55.0%
!!! GTGGCCTGTTTTGGCCTGTT+GGG - chr5_3:58770331-58770350 None:intergenic 55.0%
!!! AGTGGCCTGTTTTGGCCTGT+TGG - chr5_3:58770332-58770351 None:intergenic 55.0%
ACCCTCCAGTTTCTTGGGGA+AGG + chr5_3:58770512-58770531 Msa0821030:intron 55.0%
CTCCTTCCCCAAGAAACTGG+AGG - chr5_3:58770517-58770536 None:intergenic 55.0%
CTCCAGTTTCTTGGGGAAGG+AGG + chr5_3:58770515-58770534 Msa0821030:intron 55.0%
GCCAGAGCCGAGATCACACA+TGG - chr5_3:58767169-58767188 None:intergenic 60.0%
! CGGCTCTGGCGGTGTATCAT+TGG + chr5_3:58767179-58767198 Msa0821030:CDS 60.0%
GGCCTCCTTCCCCAAGAAAC+TGG - chr5_3:58770520-58770539 None:intergenic 60.0%
GGAAGGAGGCCCTGAGAATC+CGG + chr5_3:58770529-58770548 Msa0821030:intron 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 58765448 58771111 58765448 ID=Msa0821030;Name=Msa0821030
chr5_3 mRNA 58765448 58771111 58765448 ID=Msa0821030-mRNA-1;Parent=Msa0821030;Name=Msa0821030-mRNA-1;_AED=0.20;_eAED=0.20;_QI=52|1|1|1|1|1|14|217|492
chr5_3 exon 58765448 58765812 58765448 ID=Msa0821030-mRNA-1:exon:17847;Parent=Msa0821030-mRNA-1
chr5_3 exon 58765946 58765986 58765946 ID=Msa0821030-mRNA-1:exon:17848;Parent=Msa0821030-mRNA-1
chr5_3 exon 58766896 58766988 58766896 ID=Msa0821030-mRNA-1:exon:17849;Parent=Msa0821030-mRNA-1
chr5_3 exon 58767126 58767200 58767126 ID=Msa0821030-mRNA-1:exon:17850;Parent=Msa0821030-mRNA-1
chr5_3 exon 58767581 58767630 58767581 ID=Msa0821030-mRNA-1:exon:17851;Parent=Msa0821030-mRNA-1
chr5_3 exon 58767877 58767966 58767877 ID=Msa0821030-mRNA-1:exon:17852;Parent=Msa0821030-mRNA-1
chr5_3 exon 58768051 58768107 58768051 ID=Msa0821030-mRNA-1:exon:17853;Parent=Msa0821030-mRNA-1
chr5_3 exon 58768333 58768402 58768333 ID=Msa0821030-mRNA-1:exon:17854;Parent=Msa0821030-mRNA-1
chr5_3 exon 58769061 58769162 58769061 ID=Msa0821030-mRNA-1:exon:17855;Parent=Msa0821030-mRNA-1
chr5_3 exon 58769239 58769291 58769239 ID=Msa0821030-mRNA-1:exon:17856;Parent=Msa0821030-mRNA-1
chr5_3 exon 58769413 58769551 58769413 ID=Msa0821030-mRNA-1:exon:17857;Parent=Msa0821030-mRNA-1
chr5_3 exon 58769653 58769737 58769653 ID=Msa0821030-mRNA-1:exon:17858;Parent=Msa0821030-mRNA-1
chr5_3 exon 58770318 58770446 58770318 ID=Msa0821030-mRNA-1:exon:17859;Parent=Msa0821030-mRNA-1
chr5_3 exon 58770713 58771111 58770713 ID=Msa0821030-mRNA-1:exon:17860;Parent=Msa0821030-mRNA-1
chr5_3 five_prime_UTR 58765448 58765499 58765448 ID=Msa0821030-mRNA-1:five_prime_utr;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58765500 58765812 58765500 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58765946 58765986 58765946 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58766896 58766988 58766896 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58767126 58767200 58767126 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58767581 58767630 58767581 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58767877 58767966 58767877 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58768051 58768107 58768051 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58768333 58768402 58768333 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58769061 58769162 58769061 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58769239 58769291 58769239 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58769413 58769551 58769413 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58769653 58769737 58769653 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58770318 58770446 58770318 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 CDS 58770713 58770894 58770713 ID=Msa0821030-mRNA-1:cds;Parent=Msa0821030-mRNA-1
chr5_3 three_prime_UTR 58770895 58771111 58770895 ID=Msa0821030-mRNA-1:three_prime_utr;Parent=Msa0821030-mRNA-1
Gene Sequence

>Msa0821030

ATGGTTATGTTGTTGTCTTGTTCTACTCTTTCACCATTCTTTCATATTCCAAATTTTTTGATCAAACCAAGGAAGACACAACTACTATGTAAGGATCATTTATTTCATCAAACTACACTTCAATCCTCTTCTTTGTATCTTCCTTCTTCTATGAATAGAAAAAACCTTCACAAATGTTTCTCACAACAAGAACAATCTCAATCTATCCAAGAAGAAAAGGATGATGAAGAACAAGAACAAGAACAACTACATGCATTTCAATTTGAGCGTTTGTTTTCAAACCTTAATCAAGCCACTTTAAAGAGAGAACCTGGAAGCTTATCTAGTGCAATTTTCCTGGTTGCAGGCACTACGGTAGGTGCAGGGATACTTGCAATTCCTGCAGTGACACAAGAATCAGGCTTTTTAGCATCAACAGTTACTTGCATTTTTTGTTGGGCATTCATGGTTGTGACAGGTTTGCTCGTTGCAGAAGTAAATGTCAACACCATGTGTGATCTCGGCTCTGGCGGTGTATCATTGGTATCAATGGCCAGAAGAACTTTAGGGACAGTAGGAGTTCAAATTTCATGTTGGTCATACATCTTCATCCATTACGCCCTTCTGATTGCCTATATAGCTCGTTCTTCAGATATCTTGACGAATTTTCTTGGCATTCCCATATGGGAAAGTGCAGCTTTGTTTTCATTGATTTTTGGAGGCATATGCTACTTTGGAAGCCAGCGCTTTATTGGTGCAATTAACGGGGTTCTAGTAGTTGGAATCATCGGCTTTTTTGCAGCTCTTGTGACAGTTGCAAGTGGAAACCTGCATTTGGATGCTCTTTTAAAAGCCAATTTCCAAGCAGCTCCAATGAGTATACCAATTATCGCACTCTCATTTGTTTACCAGAATGTGGTACCTGTTCTTTGTACAAATCTTGAAGGAGACTTGTTAAAAGTAAGGAGTGCAATAATACTAGGCACTGGTATACCACTTATTCTGTTCCTAGTTTGGAATGGTGTTATCCTAGGAACTGTTGGTGACAATCCAATGGGATTAGATCCATTACAACAGTTGAGATCTTCAAATGGAACAATTGGACCTATAGTTGAGATATTCTCACTGCTCGCAATTGCTACATCTTACATTGGATTTGTTTTGGGTTTGACAGACTTCCTTGCAGACTTGCTGAATCTCCCAACAGGCCAAAACAGGCCACTTCCATACATACTGACTTTAGTTCCACCACTTATACTCTCTTTATTGGACCCTGAAATATTTTTTAAAGCCTTGGACTTTGCTGGAACATATGGAGTGCTGCTGCTTTTCGGAGTTATTCCAGCTGCAATGTCTTGGTCAGATAGGAACTCAAATTCAACTTCATCTGTGAAACTACCTGAAATAGTTCCAGGAGGAAGGATAACCCTACTAATGGTTCTTGGTTGTTCAGGATATGTTATTCTTTCTGAATTATTTGAGAACTTGCAGCACCTTTGA

Protein sequence

>Msa0821030

MVMLLSCSTLSPFFHIPNFLIKPRKTQLLCKDHLFHQTTLQSSSLYLPSSMNRKNLHKCFSQQEQSQSIQEEKDDEEQEQEQLHAFQFERLFSNLNQATLKREPGSLSSAIFLVAGTTVGAGILAIPAVTQESGFLASTVTCIFCWAFMVVTGLLVAEVNVNTMCDLGSGGVSLVSMARRTLGTVGVQISCWSYIFIHYALLIAYIARSSDILTNFLGIPIWESAALFSLIFGGICYFGSQRFIGAINGVLVVGIIGFFAALVTVASGNLHLDALLKANFQAAPMSIPIIALSFVYQNVVPVLCTNLEGDLLKVRSAIILGTGIPLILFLVWNGVILGTVGDNPMGLDPLQQLRSSNGTIGPIVEIFSLLAIATSYIGFVLGLTDFLADLLNLPTGQNRPLPYILTLVPPLILSLLDPEIFFKALDFAGTYGVLLLFGVIPAAMSWSDRNSNSTSSVKLPEIVPGGRITLLMVLGCSGYVILSELFENLQHL*