AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1225140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225140 MtrunA17_Chr0c12g0493641 98.973 584 6 0 1 584 1 584 0.0 1196
Msa1225140 MtrunA17_Chr4g0077041 82.156 269 6 1 287 555 1 227 1.49e-157 450
Msa1225140 MtrunA17_Chr4g0077021 97.297 111 3 0 1 111 1 111 1.18e-72 228
Msa1225140 MtrunA17_Chr1g0176461 31.681 565 319 21 38 571 42 570 3.29e-63 218
Msa1225140 MtrunA17_Chr4g0077031 100.000 70 0 0 152 221 3 72 2.26e-41 145
Msa1225140 MtrunA17_Chr8g0373291 24.744 586 325 29 45 555 4 548 1.60e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225140 AT1G57770.1 80.952 525 100 0 60 584 50 574 0.0 900
Msa1225140 AT1G06820.1 31.758 529 310 16 60 571 75 569 3.00e-65 224
Msa1225140 AT1G06820.3 31.758 529 310 16 60 571 75 569 4.79e-65 223
Msa1225140 AT1G06820.4 34.181 354 216 9 224 571 108 450 7.56e-53 187
Msa1225140 AT1G06820.2 29.501 461 276 15 60 504 75 502 1.90e-44 166
Msa1225140 AT5G49555.1 22.968 566 343 25 52 555 3 537 8.31e-14 74.7

Find 172 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCAAAGAGTCAAGTATT+TGG 0.236602 8_1:+90456719 None:intergenic
ATTGCTCACAACAGCCTTCT+TGG 0.241353 8_1:+90455969 None:intergenic
TGCTCAAGTTCTTGATGCTT+TGG 0.242947 8_1:-90457067 Msa1225140:CDS
GATATTGAAAGAAAGGAAAT+TGG 0.252127 8_1:-90457570 Msa1225140:five_prime_UTR
CACCAACATAATATTTGATT+TGG 0.272437 8_1:-90457494 Msa1225140:five_prime_UTR
TCAAGAATGGCAGAAGCTTT+TGG 0.272982 8_1:-90456917 Msa1225140:CDS
TTACTTTCTTTCTTGCTTGC+TGG 0.273947 8_1:-90456664 Msa1225140:CDS
TGCCATTCTTGAACAGCTTC+AGG 0.275584 8_1:+90456928 None:intergenic
GAGTCAAGTATTTGGGAAAA+AGG 0.286218 8_1:+90456727 None:intergenic
GCTCAAGTTCTTGATGCTTT+GGG 0.288521 8_1:-90457066 Msa1225140:CDS
ATAATATTTGATTTGGTGTT+TGG 0.296031 8_1:-90457487 Msa1225140:five_prime_UTR
TTCCAAAGTCTTACTCAAAT+AGG 0.312564 8_1:-90455903 Msa1225140:CDS
ATCATATAGTTGTAAATGAT+TGG 0.312848 8_1:-90455716 Msa1225140:CDS
AACTCAAATGGTTCAGTTCC+TGG 0.320765 8_1:+90455588 None:intergenic
ATCTTTCATGCATCTCCATT+TGG 0.323021 8_1:-90455857 Msa1225140:CDS
CTGAGGACCCATTTGGAAAA+AGG 0.326579 8_1:+90456780 None:intergenic
AGTTTCTAATACTTGGTAGA+TGG 0.333039 8_1:+90455006 None:intergenic
GCTGGTACAGATACCTTTCC+TGG 0.338263 8_1:-90455281 Msa1225140:CDS
TTGCAAAGAGTCAAGTATTT+GGG 0.338675 8_1:+90456720 None:intergenic
AGCTTTAAGATTTCTGTATT+CGG 0.338946 8_1:+90455539 None:intergenic
CTATCTGTTCGAGGAGATTT+CGG 0.340613 8_1:-90456850 Msa1225140:CDS
GTGTTACATGCTTATCTTCC+AGG 0.349073 8_1:-90455606 Msa1225140:CDS
CAACAATAAAGGTGTGGAAT+TGG 0.355420 8_1:+90455248 None:intergenic
TCTTTCATGCATCTCCATTT+GGG 0.358441 8_1:-90455856 Msa1225140:CDS
TCCCAGCTGCTTGATGCAAT+TGG 0.358531 8_1:-90455134 Msa1225140:CDS
CGAAGAGGATATTGAAAGAA+AGG 0.362395 8_1:-90457577 Msa1225140:five_prime_UTR
CCTGCGCTACTTATGATTCA+TGG 0.371994 8_1:-90457032 Msa1225140:CDS
AATAGTACATAAACTTTGTA+TGG 0.385743 8_1:-90455073 Msa1225140:three_prime_UTR
GAAACAGATGTAATTGTGAT+TGG 0.389065 8_1:-90457276 Msa1225140:CDS
ATCCTATTTGAGTAAGACTT+TGG 0.389095 8_1:+90455901 None:intergenic
CTCACTCTCATTACATTACA+AGG 0.391228 8_1:+90457408 None:intergenic
TGGAGTCTCCACAACAATAA+AGG 0.393345 8_1:+90455237 None:intergenic
TACACCCCTCATCGCATTCA+TGG 0.395246 8_1:+90457446 None:intergenic
AGAATCCTTTCATACGCAAT+TGG 0.397759 8_1:-90456693 Msa1225140:CDS
ACTCCTAATCTGGCACCTAC+TGG 0.397996 8_1:-90455636 Msa1225140:CDS
TTCCAATTGCATCAAGCAGC+TGG 0.400845 8_1:+90455132 None:intergenic
CATTTCTCCCTGCTGAATCC+TGG 0.401568 8_1:+90455386 None:intergenic
ATAAAAGAGTTTCTAATACT+TGG 0.410108 8_1:+90454999 None:intergenic
TCATATAGTTGTAAATGATT+GGG 0.417919 8_1:-90455715 Msa1225140:CDS
TAGTGTACTTACTCCTAATC+TGG 0.419014 8_1:-90455646 Msa1225140:CDS
AACTGAACCATTTGAGTTGT+GGG 0.419173 8_1:-90455583 Msa1225140:CDS
CAGGGTATACGCAGCGATCT+AGG 0.420176 8_1:-90455744 Msa1225140:CDS
TCCGGTCCATCATTATTCTC+TGG 0.421373 8_1:-90457123 Msa1225140:CDS
ATTGTGATTGGGAGTGGTAT+TGG 0.424946 8_1:-90457264 Msa1225140:CDS
GTCATAGTAATGGGAGGATT+AGG 0.428264 8_1:-90457347 Msa1225140:CDS
GTTGTAAATGATTGGGAAAG+AGG 0.432129 8_1:-90455708 Msa1225140:CDS
TCACACATCAAAGGTTTCTT+CGG 0.434054 8_1:-90455337 Msa1225140:CDS
GTACGAGGACTAGAGAAGTT+TGG 0.436491 8_1:-90456158 Msa1225140:CDS
ATCATCATAGTCATAGTAAT+GGG 0.437707 8_1:-90457356 Msa1225140:CDS
CGTGACAAGAAATCAGCTTC+AGG 0.438051 8_1:+90456997 None:intergenic
AAATCTCCTCGAACAGATAG+AGG 0.446661 8_1:+90456853 None:intergenic
AAATGTGAAGTGAAGTTAGT+TGG 0.458953 8_1:-90455368 Msa1225140:CDS
ACTTTGGAACAACTTCTTGA+GGG 0.464503 8_1:+90455917 None:intergenic
GCACCACTGGCAGCAACTGC+AGG 0.466053 8_1:+90455194 None:intergenic
TCTGTACCAGCTTGTATAGC+TGG 0.473355 8_1:+90455293 None:intergenic
CAGTGGGACCAGGATTCAGC+AGG 0.478022 8_1:-90455394 Msa1225140:CDS
AGGTTTACATGTTTGCAGAA+TGG 0.481167 8_1:-90456244 Msa1225140:CDS
CTCTTATTGTCTAACCGTAA+AGG 0.481489 8_1:-90454889 Msa1225140:three_prime_UTR
ACCGGAGAAAGCATTAGTTT+AGG 0.482794 8_1:-90457610 None:intergenic
AAAGGCTATAAGTTTGATTC+CGG 0.484501 8_1:-90457141 Msa1225140:CDS
GATTAGGAAAGGTGGGGTTG+TGG 0.485581 8_1:-90457331 Msa1225140:CDS
ATTCCACACCTTTATTGTTG+TGG 0.492890 8_1:-90455245 Msa1225140:CDS
AAACAGATGTAATTGTGATT+GGG 0.492966 8_1:-90457275 Msa1225140:CDS
ATATTGAAAGAAAGGAAATT+GGG 0.493766 8_1:-90457569 Msa1225140:five_prime_UTR
CATCATCATAGTCATAGTAA+TGG 0.495952 8_1:-90457357 Msa1225140:CDS
GTGGAGAGAGCAGTGGGACC+AGG 0.499060 8_1:-90455404 Msa1225140:CDS
ATGGGAGGATTAGGAAAGGT+GGG 0.499467 8_1:-90457338 Msa1225140:CDS
CAGCACCTCCAGCATGGTCG+TGG 0.499748 8_1:+90457181 None:intergenic
CGGAGGAACAGAGGAACATA+TGG 0.499814 8_1:-90455317 Msa1225140:CDS
AGTCCTTCCCACAACTCAAA+TGG 0.501774 8_1:+90455576 None:intergenic
CAATACCTGCAGCTCCATCA+AGG 0.503593 8_1:+90456192 None:intergenic
TCCCTTGTCTACAGCTGCAA+TGG 0.505505 8_1:-90456884 Msa1225140:CDS
AGAAATCAGCTTCAGGTACA+TGG 0.506854 8_1:+90457004 None:intergenic
CTCCTAATCTGGCACCTACT+GGG 0.508705 8_1:-90455635 Msa1225140:CDS
GCTTCTCAGCTTCACTCCAA+TGG 0.509152 8_1:+90456079 None:intergenic
GTTTCTAATACTTGGTAGAT+GGG 0.509848 8_1:+90455007 None:intergenic
CCTCAGCATCAAATCCCAAA+TGG 0.511011 8_1:+90455842 None:intergenic
CCATGAATCATAAGTAGCGC+AGG 0.513899 8_1:+90457032 None:intergenic
GACGCCAATGCCAGGAAAAG+TGG 0.514468 8_1:+90455217 None:intergenic
TAGTATATTGTCTGCAGAGA+TGG 0.518916 8_1:-90456629 Msa1225140:intron
ATTCATGGCATGGCATGGCA+TGG 0.522894 8_1:+90457461 None:intergenic
TTCCCAGTAGGTGCCAGATT+AGG 0.527245 8_1:+90455633 None:intergenic
ACCAGAGAATAATGATGGAC+CGG 0.531175 8_1:+90457122 None:intergenic
GAACTGAACCATTTGAGTTG+TGG 0.531241 8_1:-90455584 Msa1225140:CDS
ATTAGCTACAATTGCACCAC+TGG 0.535074 8_1:+90455181 None:intergenic
GACTTTGGAACAACTTCTTG+AGG 0.536940 8_1:+90455916 None:intergenic
GTCCTGAAGCTGTTCAAGAA+TGG 0.537122 8_1:-90456930 Msa1225140:CDS
TCAATCCAATTGCGTATGAA+AGG 0.537955 8_1:+90456688 None:intergenic
TGCAAACCAGAGAATAATGA+TGG 0.543994 8_1:+90457117 None:intergenic
TTCGAAAGCCACGACCATGC+TGG 0.544052 8_1:-90457189 Msa1225140:CDS
TTCTCTGGTTTGCAGTCAAG+AGG 0.544317 8_1:-90457108 Msa1225140:CDS
CACCAAATCAAATATTATGT+TGG 0.545046 8_1:+90457492 None:intergenic
AAGGACCTTCACAACTATGC+AGG 0.545742 8_1:-90456952 Msa1225140:CDS
TGAAAGAAAGGAAATTGGGT+AGG 0.546300 8_1:-90457565 Msa1225140:five_prime_UTR
CCCTCATCGCATTCATGGCA+TGG 0.553831 8_1:+90457451 None:intergenic
GACGTGGCTAAACTGAAGAC+AGG 0.554783 8_1:-90457537 Msa1225140:five_prime_UTR
CGCTACTTATGATTCATGGA+TGG 0.556127 8_1:-90457028 Msa1225140:CDS
GTCCCTGCAGTTGCTGCCAG+TGG 0.557851 8_1:-90455197 Msa1225140:CDS
AGCCATTGCAGCTGTAGACA+AGG 0.561564 8_1:+90456882 None:intergenic
CCATGCCATGAATGCGATGA+GGG 0.562349 8_1:-90457451 Msa1225140:CDS
AATACCTGCAGCTCCATCAA+GGG 0.564396 8_1:+90456193 None:intergenic
TCCAATTGCATCAAGCAGCT+GGG 0.566641 8_1:+90455133 None:intergenic
TTCATGGCATGGCATGGCAT+GGG 0.566917 8_1:+90457462 None:intergenic
GTGATTGGGAGTGGTATTGG+TGG 0.570399 8_1:-90457261 Msa1225140:CDS
GAAAGAAAGGAAATTGGGTA+GGG 0.570727 8_1:-90457564 Msa1225140:five_prime_UTR
GCATCAAGAACTTGAGCAAG+AGG 0.572179 8_1:+90457072 None:intergenic
ATCGCATTCATGGCATGGCA+TGG 0.573566 8_1:+90457456 None:intergenic
GTTGAAAATGACAGAGCCAT+TGG 0.574831 8_1:-90456095 Msa1225140:CDS
CCATTTGGGATTTGATGCTG+AGG 0.576837 8_1:-90455842 Msa1225140:intron
TTTGCAGTCAAGAGGTCCAC+AGG 0.577098 8_1:-90457100 Msa1225140:CDS
CACATCAAAGGTTTCTTCGG+AGG 0.578196 8_1:-90455334 Msa1225140:CDS
CAGGACCTGCATAGTTGTGA+AGG 0.579792 8_1:+90456947 None:intergenic
AGAGCAGTGGAGAGAGCAGT+GGG 0.579813 8_1:-90455410 Msa1225140:CDS
GAAGTCCACTCACACATCAA+AGG 0.579934 8_1:-90455346 Msa1225140:CDS
GCAGTTCGTACATGCCAAGA+AGG 0.580617 8_1:-90455983 Msa1225140:intron
GAGAGCAGTGGAGAGAGCAG+TGG 0.581460 8_1:-90455411 Msa1225140:CDS
ATCATAAGTAGCGCAGGGGA+CGG 0.583077 8_1:+90457038 None:intergenic
ACTGAGTTGTGCAGCACTGT+TGG 0.584888 8_1:-90457238 Msa1225140:CDS
AATGGGAGGATTAGGAAAGG+TGG 0.589689 8_1:-90457339 Msa1225140:CDS
GCCATTGCAGCTGTAGACAA+GGG 0.590322 8_1:+90456883 None:intergenic
CGAGGACTAGAGAAGTTTGG+TGG 0.591605 8_1:-90456155 Msa1225140:CDS
CAAACAACAAATAGATAATG+TGG 0.592493 8_1:-90455433 Msa1225140:intron
GATGTAATTGTGATTGGGAG+TGG 0.593011 8_1:-90457270 Msa1225140:CDS
AATCTCCTCGAACAGATAGA+GGG 0.593766 8_1:+90456854 None:intergenic
AGATTAGGAGTAAGTACACT+AGG 0.595451 8_1:+90455648 None:intergenic
GCTGATTTCTTGTCACGCAT+AGG 0.597690 8_1:-90456991 Msa1225140:CDS
CACCACTGGCAGCAACTGCA+GGG 0.605933 8_1:+90455195 None:intergenic
TGGAGTTGAATGTCCAGGAA+AGG 0.606615 8_1:+90455268 None:intergenic
AATACTTGGTAGATGGGCAA+AGG 0.607524 8_1:+90455013 None:intergenic
CATGAATCATAAGTAGCGCA+GGG 0.607675 8_1:+90457033 None:intergenic
GAACCATTTGAGTTGTGGGA+AGG 0.609081 8_1:-90455579 Msa1225140:CDS
TTTGCAGAATGGTACAAACC+AGG 0.612324 8_1:-90456233 Msa1225140:CDS
TATGGACCAGCTATACAAGC+TGG 0.613740 8_1:-90455299 Msa1225140:CDS
GTGTGAGAATTGCATCATGC+GGG 0.614927 8_1:+90455100 None:intergenic
TTGCAGAATGGTACAAACCA+GGG 0.620272 8_1:-90456232 Msa1225140:CDS
ATAGATAATGTGGAGAGCAG+TGG 0.622582 8_1:-90455423 Msa1225140:intron
GGAATTGGAGTTGAATGTCC+AGG 0.624562 8_1:+90455263 None:intergenic
AGTAATGGGAGGATTAGGAA+AGG 0.625364 8_1:-90457342 Msa1225140:CDS
AGGTTTCTTCGGAGGAACAG+AGG 0.626999 8_1:-90455326 Msa1225140:CDS
GACTAGAGAAGTTTGGTGGG+CGG 0.629357 8_1:-90456151 Msa1225140:CDS
ATTGTTGATGCTCTTGTACG+AGG 0.629566 8_1:-90456173 Msa1225140:CDS
CATCAAGAACTTGAGCAAGA+GGG 0.633604 8_1:+90457073 None:intergenic
ATTGGAGTGAAGCTGAGAAG+CGG 0.638801 8_1:-90456077 Msa1225140:CDS
GCGATGAGGGGTGTAAGTGT+TGG 0.638850 8_1:-90457438 Msa1225140:CDS
AATGAGCAGCACCTCCAGCA+TGG 0.642493 8_1:+90457175 None:intergenic
ATACCTGCAGCTCCATCAAG+GGG 0.643456 8_1:+90456194 None:intergenic
TCTTAAAGCTCAAAGATCAG+AGG 0.643901 8_1:-90455526 Msa1225140:intron
TGCAGAATGGTACAAACCAG+GGG 0.644445 8_1:-90456231 Msa1225140:CDS
ATCTCCTCGAACAGATAGAG+GGG 0.646167 8_1:+90456855 None:intergenic
ATCATAGTCATAGTAATGGG+AGG 0.651087 8_1:-90457353 Msa1225140:CDS
AAAAGGTGAGAGAAGTTGTG+TGG 0.652152 8_1:+90456744 None:intergenic
TGTAACACATGTTTCCCAGT+AGG 0.652977 8_1:+90455621 None:intergenic
TGAGCAAGAGGGTTAGCCTG+TGG 0.654171 8_1:+90457084 None:intergenic
GATTTCTCTTCAAAGTCACG+TGG 0.656256 8_1:-90456129 Msa1225140:CDS
GAGGACTAGAGAAGTTTGGT+GGG 0.661720 8_1:-90456154 Msa1225140:CDS
TCTCCACAACAATAAAGGTG+TGG 0.665845 8_1:+90455242 None:intergenic
AGAAACCTTTGATGTGTGAG+TGG 0.673422 8_1:+90455341 None:intergenic
AGGTGCATATCTAGCAGCAG+CGG 0.676346 8_1:+90456816 None:intergenic
GAAAGCCACGACCATGCTGG+AGG 0.682926 8_1:-90457186 Msa1225140:CDS
TGGGAGGATTAGGAAAGGTG+GGG 0.683293 8_1:-90457337 Msa1225140:CDS
AGTGGGACCAGGATTCAGCA+GGG 0.693423 8_1:-90455393 Msa1225140:CDS
TGTGTGAGAATTGCATCATG+CGG 0.698234 8_1:+90455099 None:intergenic
TGTGAGCAATGCATCAATGT+GGG 0.699079 8_1:-90455956 Msa1225140:CDS
TTGTGAGCAATGCATCAATG+TGG 0.700183 8_1:-90455957 Msa1225140:CDS
GCCATGCCATGAATGCGATG+AGG 0.701444 8_1:-90457452 Msa1225140:CDS
TCTCCTCGAACAGATAGAGG+GGG 0.703760 8_1:+90456856 None:intergenic
GTGGAACGAAGAGCAGCCTG+AGG 0.714071 8_1:+90456763 None:intergenic
ATGAATCATAAGTAGCGCAG+GGG 0.721253 8_1:+90457034 None:intergenic
CATGCCATGAATGCGATGAG+GGG 0.728710 8_1:-90457450 Msa1225140:CDS
GCAGAATGGTACAAACCAGG+GGG 0.746992 8_1:-90456230 Msa1225140:CDS
TACCTGCAGCTCCATCAAGG+GGG 0.749948 8_1:+90456195 None:intergenic
AATTGGGTAGGGTAGTGACG+TGG 0.751723 8_1:-90457553 Msa1225140:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTTAAGAAATGAAAT+TGG + chr8_1:90456075-90456094 None:intergenic 15.0%
!! TCAAAATTAATATACTTACT+TGG + chr8_1:90456404-90456423 None:intergenic 15.0%
!!! TCATATTTTGTATATATACA+TGG - chr8_1:90457541-90457560 Msa1225140:five_prime_UTR 15.0%
!! ATATTGAAAGAAAGGAAATT+GGG - chr8_1:90454886-90454905 Msa1225140:three_prime_UTR 20.0%
!!! ATAATATTTGATTTGGTGTT+TGG - chr8_1:90454968-90454987 Msa1225140:intron 20.0%
!! ATAACACATAAATCTCTAAA+GGG - chr8_1:90455992-90456011 Msa1225140:intron 20.0%
!! ATCATATAGTTGTAAATGAT+TGG - chr8_1:90456739-90456758 Msa1225140:CDS 20.0%
!! TCATATAGTTGTAAATGATT+GGG - chr8_1:90456740-90456759 Msa1225140:CDS 20.0%
!! AATAGTACATAAACTTTGTA+TGG - chr8_1:90457382-90457401 Msa1225140:CDS 20.0%
!! ATAAAAGAGTTTCTAATACT+TGG + chr8_1:90457459-90457478 None:intergenic 20.0%
!! GTTCATCAAAAATAAATGTT+AGG + chr8_1:90457509-90457528 None:intergenic 20.0%
! GATATTGAAAGAAAGGAAAT+TGG - chr8_1:90454885-90454904 Msa1225140:three_prime_UTR 25.0%
! CACCAACATAATATTTGATT+TGG - chr8_1:90454961-90454980 Msa1225140:intron 25.0%
! CACCAAATCAAATATTATGT+TGG + chr8_1:90454966-90454985 None:intergenic 25.0%
! ATCATCATAGTCATAGTAAT+GGG - chr8_1:90455099-90455118 Msa1225140:three_prime_UTR 25.0%
! AAACAGATGTAATTGTGATT+GGG - chr8_1:90455180-90455199 Msa1225140:CDS 25.0%
!!! AAAAAGGTATTGAAAAGAGA+AGG + chr8_1:90455662-90455681 None:intergenic 25.0%
!! TTTCAATACCTTTTTCCAAA+TGG - chr8_1:90455667-90455686 Msa1225140:CDS 25.0%
!! TTCAATACCTTTTTCCAAAT+GGG - chr8_1:90455668-90455687 Msa1225140:CDS 25.0%
! CATAACACATAAATCTCTAA+AGG - chr8_1:90455991-90456010 Msa1225140:intron 25.0%
!!! AGCTTTAAGATTTCTGTATT+CGG + chr8_1:90456919-90456938 None:intergenic 25.0%
! CAAACAACAAATAGATAATG+TGG - chr8_1:90457022-90457041 Msa1225140:CDS 25.0%
CATCATCATAGTCATAGTAA+TGG - chr8_1:90455098-90455117 Msa1225140:three_prime_UTR 30.0%
GAAACAGATGTAATTGTGAT+TGG - chr8_1:90455179-90455198 Msa1225140:CDS 30.0%
AAAGGCTATAAGTTTGATTC+CGG - chr8_1:90455314-90455333 Msa1225140:CDS 30.0%
TTGCAAAGAGTCAAGTATTT+GGG + chr8_1:90455738-90455757 None:intergenic 30.0%
AGGATAGAAACTAGTTATTG+TGG + chr8_1:90455933-90455952 None:intergenic 30.0%
TTCCAAAGTCTTACTCAAAT+AGG - chr8_1:90456552-90456571 Msa1225140:intron 30.0%
ATCCTATTTGAGTAAGACTT+TGG + chr8_1:90456557-90456576 None:intergenic 30.0%
AAATGTGAAGTGAAGTTAGT+TGG - chr8_1:90457087-90457106 Msa1225140:CDS 30.0%
GTTTCTAATACTTGGTAGAT+GGG + chr8_1:90457451-90457470 None:intergenic 30.0%
AGTTTCTAATACTTGGTAGA+TGG + chr8_1:90457452-90457471 None:intergenic 30.0%
! TTAGGTGAATGTTTTCGAAG+AGG - chr8_1:90454863-90454882 Msa1225140:three_prime_UTR 35.0%
CGAAGAGGATATTGAAAGAA+AGG - chr8_1:90454878-90454897 Msa1225140:three_prime_UTR 35.0%
TGAAAGAAAGGAAATTGGGT+AGG - chr8_1:90454890-90454909 Msa1225140:three_prime_UTR 35.0%
GAAAGAAAGGAAATTGGGTA+GGG - chr8_1:90454891-90454910 Msa1225140:three_prime_UTR 35.0%
CTCACTCTCATTACATTACA+AGG + chr8_1:90455050-90455069 None:intergenic 35.0%
! ATCATAGTCATAGTAATGGG+AGG - chr8_1:90455102-90455121 Msa1225140:three_prime_UTR 35.0%
! GCTCATTCTTTTGATGTCAA+AGG - chr8_1:90455296-90455315 Msa1225140:CDS 35.0%
TGCAAACCAGAGAATAATGA+TGG + chr8_1:90455341-90455360 None:intergenic 35.0%
! AGGTCCTACTGAGTTTTTAA+AGG - chr8_1:90455484-90455503 Msa1225140:intron 35.0%
! AGGTCCTTTAAAAACTCAGT+AGG + chr8_1:90455491-90455510 None:intergenic 35.0%
GAGTCAAGTATTTGGGAAAA+AGG + chr8_1:90455731-90455750 None:intergenic 35.0%
GTTGCAAAGAGTCAAGTATT+TGG + chr8_1:90455739-90455758 None:intergenic 35.0%
AGAATCCTTTCATACGCAAT+TGG - chr8_1:90455762-90455781 Msa1225140:intron 35.0%
TCAATCCAATTGCGTATGAA+AGG + chr8_1:90455770-90455789 None:intergenic 35.0%
TTACTTTCTTTCTTGCTTGC+TGG - chr8_1:90455791-90455810 Msa1225140:intron 35.0%
TAGTATATTGTCTGCAGAGA+TGG - chr8_1:90455826-90455845 Msa1225140:intron 35.0%
TCTGCACAAAAAAATGAGAG+AGG + chr8_1:90455953-90455972 None:intergenic 35.0%
ACTGTCTCTAAGTAAACAAC+AGG + chr8_1:90456038-90456057 None:intergenic 35.0%
ACCTAAAAGCAGCAGTTAAA+TGG - chr8_1:90456094-90456113 Msa1225140:CDS 35.0%
!!! TCCATTTAACTGCTGCTTTT+AGG + chr8_1:90456098-90456117 None:intergenic 35.0%
GAAAACTAACGAAATAGTGC+TGG - chr8_1:90456120-90456139 Msa1225140:CDS 35.0%
AGGTTTACATGTTTGCAGAA+TGG - chr8_1:90456211-90456230 Msa1225140:CDS 35.0%
!! ACTTTGGAACAACTTCTTGA+GGG + chr8_1:90456541-90456560 None:intergenic 35.0%
ATCTTTCATGCATCTCCATT+TGG - chr8_1:90456598-90456617 Msa1225140:intron 35.0%
TCTTTCATGCATCTCCATTT+GGG - chr8_1:90456599-90456618 Msa1225140:intron 35.0%
GAATACTTCAAACAGATGCA+TGG + chr8_1:90456678-90456697 None:intergenic 35.0%
GTTGTAAATGATTGGGAAAG+AGG - chr8_1:90456747-90456766 Msa1225140:CDS 35.0%
AGATTAGGAGTAAGTACACT+AGG + chr8_1:90456810-90456829 None:intergenic 35.0%
TAGTGTACTTACTCCTAATC+TGG - chr8_1:90456809-90456828 Msa1225140:CDS 35.0%
!! AACTGAACCATTTGAGTTGT+GGG - chr8_1:90456872-90456891 Msa1225140:CDS 35.0%
TCTTAAAGCTCAAAGATCAG+AGG - chr8_1:90456929-90456948 Msa1225140:CDS 35.0%
TCACACATCAAAGGTTTCTT+CGG - chr8_1:90457118-90457137 Msa1225140:CDS 35.0%
! CAACAATAAAGGTGTGGAAT+TGG + chr8_1:90457210-90457229 None:intergenic 35.0%
ATTCCACACCTTTATTGTTG+TGG - chr8_1:90457210-90457229 Msa1225140:CDS 35.0%
CTCTTATTGTCTAACCGTAA+AGG - chr8_1:90457566-90457585 Msa1225140:five_prime_UTR 35.0%
! GTCATAGTAATGGGAGGATT+AGG - chr8_1:90455108-90455127 Msa1225140:exon 40.0%
! AGTAATGGGAGGATTAGGAA+AGG - chr8_1:90455113-90455132 Msa1225140:exon 40.0%
GATGTAATTGTGATTGGGAG+TGG - chr8_1:90455185-90455204 Msa1225140:CDS 40.0%
ATTGTGATTGGGAGTGGTAT+TGG - chr8_1:90455191-90455210 Msa1225140:CDS 40.0%
!! ACCAGAGAATAATGATGGAC+CGG + chr8_1:90455336-90455355 None:intergenic 40.0%
CATCAAGAACTTGAGCAAGA+GGG + chr8_1:90455385-90455404 None:intergenic 40.0%
TGCTCAAGTTCTTGATGCTT+TGG - chr8_1:90455388-90455407 Msa1225140:CDS 40.0%
GCTCAAGTTCTTGATGCTTT+GGG - chr8_1:90455389-90455408 Msa1225140:CDS 40.0%
ATGAATCATAAGTAGCGCAG+GGG + chr8_1:90455424-90455443 None:intergenic 40.0%
CATGAATCATAAGTAGCGCA+GGG + chr8_1:90455425-90455444 None:intergenic 40.0%
CGCTACTTATGATTCATGGA+TGG - chr8_1:90455427-90455446 Msa1225140:intron 40.0%
AGAAATCAGCTTCAGGTACA+TGG + chr8_1:90455454-90455473 None:intergenic 40.0%
! TCAAGAATGGCAGAAGCTTT+TGG - chr8_1:90455538-90455557 Msa1225140:CDS 40.0%
AATCTCCTCGAACAGATAGA+GGG + chr8_1:90455604-90455623 None:intergenic 40.0%
AAATCTCCTCGAACAGATAG+AGG + chr8_1:90455605-90455624 None:intergenic 40.0%
CTATCTGTTCGAGGAGATTT+CGG - chr8_1:90455605-90455624 Msa1225140:CDS 40.0%
AAAAGGTGAGAGAAGTTGTG+TGG + chr8_1:90455714-90455733 None:intergenic 40.0%
!! TGATGAGTGGTAATGGCAAT+TGG + chr8_1:90455871-90455890 None:intergenic 40.0%
! AATGATTGCACGTTGATGAG+TGG + chr8_1:90455884-90455903 None:intergenic 40.0%
AACATGTAAACCTGAGGGAA+GGG + chr8_1:90456204-90456223 None:intergenic 40.0%
AAACATGTAAACCTGAGGGA+AGG + chr8_1:90456205-90456224 None:intergenic 40.0%
CTGCAAACATGTAAACCTGA+GGG + chr8_1:90456209-90456228 None:intergenic 40.0%
TCTGCAAACATGTAAACCTG+AGG + chr8_1:90456210-90456229 None:intergenic 40.0%
TTTGCAGAATGGTACAAACC+AGG - chr8_1:90456222-90456241 Msa1225140:CDS 40.0%
TTGCAGAATGGTACAAACCA+GGG - chr8_1:90456223-90456242 Msa1225140:CDS 40.0%
ATTGTTGATGCTCTTGTACG+AGG - chr8_1:90456282-90456301 Msa1225140:intron 40.0%
GATTTCTCTTCAAAGTCACG+TGG - chr8_1:90456326-90456345 Msa1225140:intron 40.0%
GTTGAAAATGACAGAGCCAT+TGG - chr8_1:90456360-90456379 Msa1225140:intron 40.0%
TTGTGAGCAATGCATCAATG+TGG - chr8_1:90456498-90456517 Msa1225140:intron 40.0%
TGTGAGCAATGCATCAATGT+GGG - chr8_1:90456499-90456518 Msa1225140:intron 40.0%
!! GACTTTGGAACAACTTCTTG+AGG + chr8_1:90456542-90456561 None:intergenic 40.0%
TATTCAACATCGAGTGAGCA+GGG - chr8_1:90456693-90456712 Msa1225140:CDS 40.0%
TGTAACACATGTTTCCCAGT+AGG + chr8_1:90456837-90456856 None:intergenic 40.0%
GTGTTACATGCTTATCTTCC+AGG - chr8_1:90456849-90456868 Msa1225140:CDS 40.0%
AACTCAAATGGTTCAGTTCC+TGG + chr8_1:90456870-90456889 None:intergenic 40.0%
!! GAACTGAACCATTTGAGTTG+TGG - chr8_1:90456871-90456890 Msa1225140:CDS 40.0%
ATAGATAATGTGGAGAGCAG+TGG - chr8_1:90457032-90457051 Msa1225140:CDS 40.0%
AGAAACCTTTGATGTGTGAG+TGG + chr8_1:90457117-90457136 None:intergenic 40.0%
TCTCCACAACAATAAAGGTG+TGG + chr8_1:90457216-90457235 None:intergenic 40.0%
TGGAGTCTCCACAACAATAA+AGG + chr8_1:90457221-90457240 None:intergenic 40.0%
ATTAGCTACAATTGCACCAC+TGG + chr8_1:90457277-90457296 None:intergenic 40.0%
TGTGTGAGAATTGCATCATG+CGG + chr8_1:90457359-90457378 None:intergenic 40.0%
AATACTTGGTAGATGGGCAA+AGG + chr8_1:90457445-90457464 None:intergenic 40.0%
! CATTTTCATGCTCGCCTTTA+CGG + chr8_1:90457583-90457602 None:intergenic 40.0%
AATGGGAGGATTAGGAAAGG+TGG - chr8_1:90455116-90455135 Msa1225140:exon 45.0%
ATGGGAGGATTAGGAAAGGT+GGG - chr8_1:90455117-90455136 Msa1225140:exon 45.0%
TCCGGTCCATCATTATTCTC+TGG - chr8_1:90455332-90455351 Msa1225140:CDS 45.0%
! TTCTCTGGTTTGCAGTCAAG+AGG - chr8_1:90455347-90455366 Msa1225140:CDS 45.0%
GCATCAAGAACTTGAGCAAG+AGG + chr8_1:90455386-90455405 None:intergenic 45.0%
CCATGAATCATAAGTAGCGC+AGG + chr8_1:90455426-90455445 None:intergenic 45.0%
CCTGCGCTACTTATGATTCA+TGG - chr8_1:90455423-90455442 Msa1225140:intron 45.0%
CGTGACAAGAAATCAGCTTC+AGG + chr8_1:90455461-90455480 None:intergenic 45.0%
! GCTGATTTCTTGTCACGCAT+AGG - chr8_1:90455464-90455483 Msa1225140:intron 45.0%
AAGGACCTTCACAACTATGC+AGG - chr8_1:90455503-90455522 Msa1225140:intron 45.0%
GTCCTGAAGCTGTTCAAGAA+TGG - chr8_1:90455525-90455544 Msa1225140:intron 45.0%
TGCCATTCTTGAACAGCTTC+AGG + chr8_1:90455530-90455549 None:intergenic 45.0%
ATCTCCTCGAACAGATAGAG+GGG + chr8_1:90455603-90455622 None:intergenic 45.0%
CTGAGGACCCATTTGGAAAA+AGG + chr8_1:90455678-90455697 None:intergenic 45.0%
! CTTTTTCCAAATGGGTCCTC+AGG - chr8_1:90455676-90455695 Msa1225140:CDS 45.0%
! TGCACGTTGATGAGTGGTAA+TGG + chr8_1:90455878-90455897 None:intergenic 45.0%
TGCAGAATGGTACAAACCAG+GGG - chr8_1:90456224-90456243 Msa1225140:CDS 45.0%
AATACCTGCAGCTCCATCAA+GGG + chr8_1:90456265-90456284 None:intergenic 45.0%
GTACGAGGACTAGAGAAGTT+TGG - chr8_1:90456297-90456316 Msa1225140:intron 45.0%
GAGGACTAGAGAAGTTTGGT+GGG - chr8_1:90456301-90456320 Msa1225140:intron 45.0%
ATTGGAGTGAAGCTGAGAAG+CGG - chr8_1:90456378-90456397 Msa1225140:intron 45.0%
ATTGCTCACAACAGCCTTCT+TGG + chr8_1:90456489-90456508 None:intergenic 45.0%
CCTCAGCATCAAATCCCAAA+TGG + chr8_1:90456616-90456635 None:intergenic 45.0%
! CCATTTGGGATTTGATGCTG+AGG - chr8_1:90456613-90456632 Msa1225140:intron 45.0%
! TTGATGCTGAGGTGAGGTTT+TGG - chr8_1:90456624-90456643 Msa1225140:intron 45.0%
GTATTCAACATCGAGTGAGC+AGG - chr8_1:90456692-90456711 Msa1225140:CDS 45.0%
!! GAACCATTTGAGTTGTGGGA+AGG - chr8_1:90456876-90456895 Msa1225140:CDS 45.0%
AGTCCTTCCCACAACTCAAA+TGG + chr8_1:90456882-90456901 None:intergenic 45.0%
GAAGTCCACTCACACATCAA+AGG - chr8_1:90457109-90457128 Msa1225140:CDS 45.0%
CACATCAAAGGTTTCTTCGG+AGG - chr8_1:90457121-90457140 Msa1225140:CDS 45.0%
TATGGACCAGCTATACAAGC+TGG - chr8_1:90457156-90457175 Msa1225140:CDS 45.0%
TCTGTACCAGCTTGTATAGC+TGG + chr8_1:90457165-90457184 None:intergenic 45.0%
TGGAGTTGAATGTCCAGGAA+AGG + chr8_1:90457190-90457209 None:intergenic 45.0%
GGAATTGGAGTTGAATGTCC+AGG + chr8_1:90457195-90457214 None:intergenic 45.0%
TCCAATTGCATCAAGCAGCT+GGG + chr8_1:90457325-90457344 None:intergenic 45.0%
TTCCAATTGCATCAAGCAGC+TGG + chr8_1:90457326-90457345 None:intergenic 45.0%
GTGTGAGAATTGCATCATGC+GGG + chr8_1:90457358-90457377 None:intergenic 45.0%
AATTGGGTAGGGTAGTGACG+TGG - chr8_1:90454902-90454921 Msa1225140:three_prime_UTR 50.0%
GACGTGGCTAAACTGAAGAC+AGG - chr8_1:90454918-90454937 Msa1225140:three_prime_UTR 50.0%
TTCATGGCATGGCATGGCAT+GGG + chr8_1:90454996-90455015 None:intergenic 50.0%
ATTCATGGCATGGCATGGCA+TGG + chr8_1:90454997-90455016 None:intergenic 50.0%
ATCGCATTCATGGCATGGCA+TGG + chr8_1:90455002-90455021 None:intergenic 50.0%
CCATGCCATGAATGCGATGA+GGG - chr8_1:90455004-90455023 Msa1225140:three_prime_UTR 50.0%
CATGCCATGAATGCGATGAG+GGG - chr8_1:90455005-90455024 Msa1225140:three_prime_UTR 50.0%
TACACCCCTCATCGCATTCA+TGG + chr8_1:90455012-90455031 None:intergenic 50.0%
TGGGAGGATTAGGAAAGGTG+GGG - chr8_1:90455118-90455137 Msa1225140:exon 50.0%
GATTAGGAAAGGTGGGGTTG+TGG - chr8_1:90455124-90455143 Msa1225140:exon 50.0%
! GTGATTGGGAGTGGTATTGG+TGG - chr8_1:90455194-90455213 Msa1225140:CDS 50.0%
ACTGAGTTGTGCAGCACTGT+TGG - chr8_1:90455217-90455236 Msa1225140:CDS 50.0%
TTTGCAGTCAAGAGGTCCAC+AGG - chr8_1:90455355-90455374 Msa1225140:CDS 50.0%
ATCATAAGTAGCGCAGGGGA+CGG + chr8_1:90455420-90455439 None:intergenic 50.0%
CAGGACCTGCATAGTTGTGA+AGG + chr8_1:90455511-90455530 None:intergenic 50.0%
TCCCTTGTCTACAGCTGCAA+TGG - chr8_1:90455571-90455590 Msa1225140:CDS 50.0%
GCCATTGCAGCTGTAGACAA+GGG + chr8_1:90455575-90455594 None:intergenic 50.0%
AGCCATTGCAGCTGTAGACA+AGG + chr8_1:90455576-90455595 None:intergenic 50.0%
TCTCCTCGAACAGATAGAGG+GGG + chr8_1:90455602-90455621 None:intergenic 50.0%
AGGTGCATATCTAGCAGCAG+CGG + chr8_1:90455642-90455661 None:intergenic 50.0%
GCAGAATGGTACAAACCAGG+GGG - chr8_1:90456225-90456244 Msa1225140:CDS 50.0%
TGTCTTGAGTACCCCCTTGA+TGG - chr8_1:90456249-90456268 Msa1225140:intron 50.0%
ATACCTGCAGCTCCATCAAG+GGG + chr8_1:90456264-90456283 None:intergenic 50.0%
CAATACCTGCAGCTCCATCA+AGG + chr8_1:90456266-90456285 None:intergenic 50.0%
CGAGGACTAGAGAAGTTTGG+TGG - chr8_1:90456300-90456319 Msa1225140:intron 50.0%
! GACTAGAGAAGTTTGGTGGG+CGG - chr8_1:90456304-90456323 Msa1225140:intron 50.0%
GCTTCTCAGCTTCACTCCAA+TGG + chr8_1:90456379-90456398 None:intergenic 50.0%
GCAGTTCGTACATGCCAAGA+AGG - chr8_1:90456472-90456491 Msa1225140:intron 50.0%
TGGGATTTGATGCTGAGGTG+AGG - chr8_1:90456618-90456637 Msa1225140:intron 50.0%
ACTCCTAATCTGGCACCTAC+TGG - chr8_1:90456819-90456838 Msa1225140:CDS 50.0%
CTCCTAATCTGGCACCTACT+GGG - chr8_1:90456820-90456839 Msa1225140:CDS 50.0%
TTCCCAGTAGGTGCCAGATT+AGG + chr8_1:90456825-90456844 None:intergenic 50.0%
CATTTCTCCCTGCTGAATCC+TGG + chr8_1:90457072-90457091 None:intergenic 50.0%
AGGTTTCTTCGGAGGAACAG+AGG - chr8_1:90457129-90457148 Msa1225140:CDS 50.0%
CGGAGGAACAGAGGAACATA+TGG - chr8_1:90457138-90457157 Msa1225140:CDS 50.0%
GCTGGTACAGATACCTTTCC+TGG - chr8_1:90457174-90457193 Msa1225140:CDS 50.0%
!! TGTGGAGACTCCACTTTTCC+TGG - chr8_1:90457228-90457247 Msa1225140:CDS 50.0%
!! GACTCCACTTTTCCTGGCAT+TGG - chr8_1:90457234-90457253 Msa1225140:CDS 50.0%
TCCCAGCTGCTTGATGCAAT+TGG - chr8_1:90457321-90457340 Msa1225140:CDS 50.0%
GCCATGCCATGAATGCGATG+AGG - chr8_1:90455003-90455022 Msa1225140:three_prime_UTR 55.0%
CCCTCATCGCATTCATGGCA+TGG + chr8_1:90455007-90455026 None:intergenic 55.0%
! GCGATGAGGGGTGTAAGTGT+TGG - chr8_1:90455017-90455036 Msa1225140:three_prime_UTR 55.0%
TTCGAAAGCCACGACCATGC+TGG - chr8_1:90455266-90455285 Msa1225140:CDS 55.0%
AATGAGCAGCACCTCCAGCA+TGG + chr8_1:90455283-90455302 None:intergenic 55.0%
!! TGAGCAAGAGGGTTAGCCTG+TGG + chr8_1:90455374-90455393 None:intergenic 55.0%
CTTCCCCCTCTATCTGTTCG+AGG - chr8_1:90455596-90455615 Msa1225140:CDS 55.0%
TACCTGCAGCTCCATCAAGG+GGG + chr8_1:90456263-90456282 None:intergenic 55.0%
CAGGGTATACGCAGCGATCT+AGG - chr8_1:90456711-90456730 Msa1225140:CDS 55.0%
AGAGCAGTGGAGAGAGCAGT+GGG - chr8_1:90457045-90457064 Msa1225140:CDS 55.0%
AGTGGGACCAGGATTCAGCA+GGG - chr8_1:90457062-90457081 Msa1225140:CDS 55.0%
GACGCCAATGCCAGGAAAAG+TGG + chr8_1:90457241-90457260 None:intergenic 55.0%
GAAAGCCACGACCATGCTGG+AGG - chr8_1:90455269-90455288 Msa1225140:CDS 60.0%
GAGCAGCCTGAGGACCCATT+TGG + chr8_1:90455685-90455704 None:intergenic 60.0%
GTGGAACGAAGAGCAGCCTG+AGG + chr8_1:90455695-90455714 None:intergenic 60.0%
CAGTTGCTCTCCCTTCCCTC+AGG - chr8_1:90456191-90456210 Msa1225140:CDS 60.0%
TACCCCCTTGATGGAGCTGC+AGG - chr8_1:90456258-90456277 Msa1225140:intron 60.0%
GAGAGCAGTGGAGAGAGCAG+TGG - chr8_1:90457044-90457063 Msa1225140:CDS 60.0%
CAGTGGGACCAGGATTCAGC+AGG - chr8_1:90457061-90457080 Msa1225140:CDS 60.0%
CACCACTGGCAGCAACTGCA+GGG + chr8_1:90457263-90457282 None:intergenic 60.0%
CAGCACCTCCAGCATGGTCG+TGG + chr8_1:90455277-90455296 None:intergenic 65.0%
GGGTACTCAAGACAGCCCCC+TGG + chr8_1:90456243-90456262 None:intergenic 65.0%
GTGGAGAGAGCAGTGGGACC+AGG - chr8_1:90457051-90457070 Msa1225140:CDS 65.0%
ACTGCAGGGACGCCAATGCC+AGG + chr8_1:90457249-90457268 None:intergenic 65.0%
GTCCCTGCAGTTGCTGCCAG+TGG - chr8_1:90457258-90457277 Msa1225140:CDS 65.0%
GCACCACTGGCAGCAACTGC+AGG + chr8_1:90457264-90457283 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 90454851 90457626 90454851 ID=Msa1225140;Name=Msa1225140
chr8_1 mRNA 90454851 90457626 90454851 ID=Msa1225140-mRNA-1;Parent=Msa1225140;Name=Msa1225140-mRNA-1;_AED=0.09;_eAED=0.09;_QI=145|1|1|1|0.8|0.66|6|255|584
chr8_1 exon 90454851 90454977 90454851 ID=Msa1225140-mRNA-1:exon:32898;Parent=Msa1225140-mRNA-1
chr8_1 exon 90454999 90455441 90454999 ID=Msa1225140-mRNA-1:exon:32897;Parent=Msa1225140-mRNA-1
chr8_1 exon 90455527 90455763 90455527 ID=Msa1225140-mRNA-1:exon:32896;Parent=Msa1225140-mRNA-1
chr8_1 exon 90455843 90456001 90455843 ID=Msa1225140-mRNA-1:exon:32895;Parent=Msa1225140-mRNA-1
chr8_1 exon 90456073 90456264 90456073 ID=Msa1225140-mRNA-1:exon:32894;Parent=Msa1225140-mRNA-1
chr8_1 exon 90456630 90457626 90456630 ID=Msa1225140-mRNA-1:exon:32893;Parent=Msa1225140-mRNA-1
chr8_1 five_prime_UTR 90457482 90457626 90457482 ID=Msa1225140-mRNA-1:five_prime_utr;Parent=Msa1225140-mRNA-1
chr8_1 CDS 90456630 90457481 90456630 ID=Msa1225140-mRNA-1:cds;Parent=Msa1225140-mRNA-1
chr8_1 CDS 90456073 90456264 90456073 ID=Msa1225140-mRNA-1:cds;Parent=Msa1225140-mRNA-1
chr8_1 CDS 90455843 90456001 90455843 ID=Msa1225140-mRNA-1:cds;Parent=Msa1225140-mRNA-1
chr8_1 CDS 90455527 90455763 90455527 ID=Msa1225140-mRNA-1:cds;Parent=Msa1225140-mRNA-1
chr8_1 CDS 90455127 90455441 90455127 ID=Msa1225140-mRNA-1:cds;Parent=Msa1225140-mRNA-1
chr8_1 three_prime_UTR 90454999 90455126 90454999 ID=Msa1225140-mRNA-1:three_prime_utr;Parent=Msa1225140-mRNA-1
chr8_1 three_prime_UTR 90454851 90454977 90454851 ID=Msa1225140-mRNA-1:three_prime_utr;Parent=Msa1225140-mRNA-1
Gene Sequence

>Msa1225140

ATGCCATGCCATGCCATGAATGCGATGAGGGGTGTAAGTGTTGGTGTGTTTCCTTGTAATGTAATGAGAGTGAGAAGATACTGTTCAAGAATTGATGATGATCATCATCATAGTCATAGTAATGGGAGGATTAGGAAAGGTGGGGTTGTGGTGCGAAACAGCAGCAACAAAGTAGATGAAACAGAAACAGATGTAATTGTGATTGGGAGTGGTATTGGTGGACTGAGTTGTGCAGCACTGTTGGCAAGATATGAACAAGATGTTGTCGTTTTCGAAAGCCACGACCATGCTGGAGGTGCTGCTCATTCTTTTGATGTCAAAGGCTATAAGTTTGATTCCGGTCCATCATTATTCTCTGGTTTGCAGTCAAGAGGTCCACAGGCTAACCCTCTTGCTCAAGTTCTTGATGCTTTGGGAGAGTCCGTCCCCTGCGCTACTTATGATTCATGGATGGTCCATGTACCTGAAGCTGATTTCTTGTCACGCATAGGTCCTACTGAGTTTTTAAAGGACCTTCACAACTATGCAGGTCCTGAAGCTGTTCAAGAATGGCAGAAGCTTTTGGATGCTGTACTTCCCTTGTCTACAGCTGCAATGGCTCTTCCCCCTCTATCTGTTCGAGGAGATTTCGGTGTTCTTTACACCGCTGCTGCTAGATATGCACCTTCTCTTTTCAATACCTTTTTCCAAATGGGTCCTCAGGCTGCTCTTCGTTCCACACAACTTCTCTCACCTTTTTCCCAAATACTTGACTCTTTGCAACTAAAGAATCCTTTCATACGCAATTGGATTGACTTACTTTCTTTCTTGCTTGCTGGTGTCAAATCTGATAGTATATTGTCTGCAGAGATGGTTTACATGTTTGCAGAATGGTACAAACCAGGGGGCTGTCTTGAGTACCCCCTTGATGGAGCTGCAGGTATTGTTGATGCTCTTGTACGAGGACTAGAGAAGTTTGGTGGGCGGATTTCTCTTCAAAGTCACGTGGAAAAGATTGTTGTTGAAAATGACAGAGCCATTGGAGTGAAGCTGAGAAGCGGCCAATTCGTACATGCCAAGAAGGCTGTTGTGAGCAATGCATCAATGTGGGATACTTTAAAATTGCTCCCTCAAGAAGTTGTTCCAAAGTCTTACTCAAATAGGATTAACACGACTAGTCAGTGTGAATCTTTCATGCATCTCCATTTGGGATTTGATGCTGAGGGTATACGCAGCGATCTAGGAATTCATCATATAGTTGTAAATGATTGGGAAAGAGGAGTTGACGCAGATCAGAATGTTGTGTTGATATCAGTTCCTAGTGTACTTACTCCTAATCTGGCACCTACTGGGAAACATGTGTTACATGCTTATCTTCCAGGAACTGAACCATTTGAGTTGTGGGAAGGACTTGATCGTAAGAGTGCCGAATACAGAAATCTTAAAGCTCAAAGATCAGAGATAATGTGGAGAGCAGTGGAGAGAGCAGTGGGACCAGGATTCAGCAGGGAGAAATGTGAAGTGAAGTTAGTTGGAAGTCCACTCACACATCAAAGGTTTCTTCGGAGGAACAGAGGAACATATGGACCAGCTATACAAGCTGGTACAGATACCTTTCCTGGACATTCAACTCCAATTCCACACCTTTATTGTTGTGGAGACTCCACTTTTCCTGGCATTGGCGTCCCTGCAGTTGCTGCCAGTGGTGCAATTGTAGCTAATTCTCTAGTTTCAGTGTCTCAGCATTCCCAGCTGCTTGATGCAATTGGAATTTGA

Protein sequence

>Msa1225140

MPCHAMNAMRGVSVGVFPCNVMRVRRYCSRIDDDHHHSHSNGRIRKGGVVVRNSSNKVDETETDVIVIGSGIGGLSCAALLARYEQDVVVFESHDHAGGAAHSFDVKGYKFDSGPSLFSGLQSRGPQANPLAQVLDALGESVPCATYDSWMVHVPEADFLSRIGPTEFLKDLHNYAGPEAVQEWQKLLDAVLPLSTAAMALPPLSVRGDFGVLYTAAARYAPSLFNTFFQMGPQAALRSTQLLSPFSQILDSLQLKNPFIRNWIDLLSFLLAGVKSDSILSAEMVYMFAEWYKPGGCLEYPLDGAAGIVDALVRGLEKFGGRISLQSHVEKIVVENDRAIGVKLRSGQFVHAKKAVVSNASMWDTLKLLPQEVVPKSYSNRINTTSQCESFMHLHLGFDAEGIRSDLGIHHIVVNDWERGVDADQNVVLISVPSVLTPNLAPTGKHVLHAYLPGTEPFELWEGLDRKSAEYRNLKAQRSEIMWRAVERAVGPGFSREKCEVKLVGSPLTHQRFLRRNRGTYGPAIQAGTDTFPGHSTPIPHLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSQLLDAIGI*