Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115620 | GAU44344.1 | 95.755 | 212 | 9 | 0 | 1 | 212 | 1 | 212 | 1.66e-146 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115620 | sp|Q7XPW5|PMM_ORYSJ | 88.263 | 213 | 24 | 1 | 1 | 212 | 1 | 213 | 1.50e-136 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115620 | A0A2Z6NIR0 | 95.755 | 212 | 9 | 0 | 1 | 212 | 1 | 212 | 7.93e-147 | 424 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0116130 | Msa1115620 | 0.816795 | 4.599081e-52 | -8.615850e-47 |
| Msa0619860 | Msa1115620 | 0.823780 | 1.152239e-53 | -8.615850e-47 |
| Msa0633570 | Msa1115620 | 0.801808 | 7.559292e-49 | -8.615850e-47 |
| Msa0659030 | Msa1115620 | 0.805841 | 1.098576e-49 | -8.615850e-47 |
| Msa0705000 | Msa1115620 | 0.836467 | 9.198143e-57 | -8.615850e-47 |
| Msa0705040 | Msa1115620 | 0.828188 | 1.033092e-54 | -8.615850e-47 |
| Msa0729200 | Msa1115620 | 0.800869 | 1.176891e-48 | -8.615850e-47 |
| Msa0785130 | Msa1115620 | 0.809206 | 2.121466e-50 | -8.615850e-47 |
| Msa0819540 | Msa1115620 | 0.803536 | 3.326187e-49 | -8.615850e-47 |
| Msa0123010 | Msa1115620 | 0.817101 | 3.927282e-52 | -8.615850e-47 |
| Msa0218830 | Msa1115620 | 0.810725 | 9.991255e-51 | -8.615850e-47 |
| Msa0221030 | Msa1115620 | 0.819398 | 1.186097e-52 | -8.615850e-47 |
| Msa1021120 | Msa1115620 | 0.802611 | 5.167222e-49 | -8.615850e-47 |
| Msa1048690 | Msa1115620 | 0.853029 | 3.129572e-61 | -8.615850e-47 |
| Msa0245060 | Msa1115620 | 0.801162 | 1.025652e-48 | -8.615850e-47 |
| Msa0291520 | Msa1115620 | 0.801276 | 9.717735e-49 | -8.615850e-47 |
| Msa0300350 | Msa1115620 | 0.817179 | 3.771706e-52 | -8.615850e-47 |
| Msa1115620 | Msa1166870 | 0.813502 | 2.477780e-51 | -8.615850e-47 |
| Msa1115620 | Msa1256770 | 0.804085 | 2.558997e-49 | -8.615850e-47 |
| Msa1115620 | Msa1298050 | 0.803763 | 2.985046e-49 | -8.615850e-47 |
| Msa1115620 | Msa1331710 | 0.802881 | 4.545857e-49 | -8.615850e-47 |
| Msa1115620 | Msa1349570 | 0.830224 | 3.312122e-55 | -8.615850e-47 |
| Msa1115620 | Msa1369190 | 0.854777 | 9.820705e-62 | -8.615850e-47 |
| Msa1115620 | Msa1426370 | 0.825949 | 3.546163e-54 | -8.615850e-47 |
| Msa1115620 | Msa1426490 | 0.816529 | 5.276899e-52 | -8.615850e-47 |
| Msa1115620 | Msa1462860 | 0.820608 | 6.270853e-53 | -8.615850e-47 |
| Msa0945480 | Msa1115620 | 0.833353 | 5.598652e-56 | -8.615850e-47 |
| Msa0960830 | Msa1115620 | 0.806929 | 6.477861e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115620 | MtrunA17_Chr7g0247051 | 94.340 | 212 | 12 | 0 | 1 | 212 | 1 | 212 | 3.34e-149 | 421 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115620 | AT2G45790.1 | 84.434 | 212 | 33 | 0 | 1 | 212 | 1 | 212 | 2.64e-133 | 381 |
Find 99 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCGGCGATTAGGGAAAA+TGG | 0.182243 | 7_3:-63107797 | None:intergenic |
| AATCTCACTAACCTCTTAAT+AGG | 0.197187 | 7_3:-63106832 | None:intergenic |
| CATAGCAATGCCATGGAAAT+TGG | 0.201453 | 7_3:+63107959 | Msa1115620:CDS |
| CAAACTCATCTCTTTCTTCT+TGG | 0.206366 | 7_3:-63106980 | None:intergenic |
| GCATATCATTCAATTAAATT+TGG | 0.223092 | 7_3:+63108840 | Msa1115620:exon |
| AAGCAATCACACCAGGTTTC+AGG | 0.231242 | 7_3:-63105305 | None:intergenic |
| CAATTTGTTCCTCGGCGATT+AGG | 0.274679 | 7_3:-63107805 | None:intergenic |
| GCAGTGTACTTCTCTCTTCC+TGG | 0.280491 | 7_3:+63108663 | Msa1115620:CDS |
| AATTTGTTCCTCGGCGATTA+GGG | 0.293211 | 7_3:-63107804 | None:intergenic |
| ATTGCTTTGTTTGATGTTGA+TGG | 0.316545 | 7_3:+63105321 | Msa1115620:CDS |
| GATCAGATTCATAAATTTCA+TGG | 0.320831 | 7_3:-63108425 | None:intergenic |
| CAGAGCTTGAAGACATTCAT+TGG | 0.326846 | 7_3:+63106502 | Msa1115620:intron |
| CAGCATATCATTATTGATAC+TGG | 0.333054 | 7_3:+63108706 | Msa1115620:CDS |
| GGGCGAGAATTCCACACATT+TGG | 0.333523 | 7_3:-63107847 | None:intergenic |
| TTGTAACGGTTGGAGTTGTT+GGG | 0.339961 | 7_3:+63106006 | Msa1115620:CDS |
| CTCTCATGAATCAGGAAGTA+TGG | 0.357003 | 7_3:+63107913 | Msa1115620:CDS |
| ATTGTAACGGTTGGAGTTGT+TGG | 0.366862 | 7_3:+63106005 | Msa1115620:CDS |
| TGATTAATAGTAAGTTATAA+TGG | 0.376398 | 7_3:+63105278 | Msa1115620:exon |
| CACTGCTTGATAGTATCTTC+AGG | 0.395775 | 7_3:-63108646 | None:intergenic |
| TACTGCTTGAGATACCTTGA+TGG | 0.396477 | 7_3:+63107336 | Msa1115620:CDS |
| TGGCTACAGTTTCTCCCAAT+AGG | 0.406761 | 7_3:-63106960 | None:intergenic |
| GCTTCATTACATTGCTGACT+TGG | 0.410076 | 7_3:+63106804 | Msa1115620:CDS |
| GAAGAAGATGGGTCTTGAAT+GGG | 0.410546 | 7_3:-63104961 | None:intergenic |
| GTTTATATAATACTATAGAT+TGG | 0.411696 | 7_3:-63104938 | None:intergenic |
| AGAGCTTGAAGACATTCATT+GGG | 0.413591 | 7_3:+63106503 | Msa1115620:intron |
| AAAGAATAGAATACCTTCCT+TGG | 0.425118 | 7_3:-63105357 | None:intergenic |
| AGAACTAGGTCCATAGGTCT+TGG | 0.430024 | 7_3:-63107869 | None:intergenic |
| ATCTCACTAACCTCTTAATA+GGG | 0.431862 | 7_3:-63106831 | None:intergenic |
| GAACTAGGTCCATAGGTCTT+GGG | 0.433911 | 7_3:-63107868 | None:intergenic |
| AAATAAGAGATTGAAGAAGA+TGG | 0.439100 | 7_3:-63104973 | None:intergenic |
| TGTATGAACTGCAACATCTC+TGG | 0.440563 | 7_3:-63105822 | None:intergenic |
| TGTGGGAACTCTCATGAATC+AGG | 0.443081 | 7_3:+63107905 | Msa1115620:CDS |
| AATAAGAGATTGAAGAAGAT+GGG | 0.445855 | 7_3:-63104972 | None:intergenic |
| ATGTTGAATGTGTCACCTAT+TGG | 0.447595 | 7_3:+63106945 | Msa1115620:CDS |
| TGAAGAAGATGGGTCTTGAA+TGG | 0.451294 | 7_3:-63104962 | None:intergenic |
| CTGGCCTTCAATTTGTTCCT+CGG | 0.452069 | 7_3:-63107813 | None:intergenic |
| ACTTGGATATCCCTATTAAG+AGG | 0.458360 | 7_3:+63106821 | Msa1115620:CDS |
| GAAGTATGGTCTCATGTTGC+GGG | 0.472235 | 7_3:+63107927 | Msa1115620:CDS |
| CATAAGCAAGGACAGCTCAT+TGG | 0.473469 | 7_3:+63106338 | Msa1115620:CDS |
| ACACGAAAGGTGTGAGAACT+AGG | 0.476211 | 7_3:-63107883 | None:intergenic |
| AAAACAATAATCATAGTCAT+TGG | 0.476754 | 7_3:-63106294 | None:intergenic |
| CCTCGGCGATTAGGGAAAAT+GGG | 0.477966 | 7_3:-63107796 | None:intergenic |
| TATGAATCTGATCGGACTAT+CGG | 0.479199 | 7_3:+63108435 | Msa1115620:CDS |
| AATTCTCGCCCCAAGACCTA+TGG | 0.491274 | 7_3:+63107859 | Msa1115620:CDS |
| CTTATTGAAGCCAATTTCCA+TGG | 0.492511 | 7_3:-63107969 | None:intergenic |
| ATGAATCTGATCGGACTATC+GGG | 0.497720 | 7_3:+63108436 | Msa1115620:CDS |
| AGCAATCACACCAGGTTTCA+GGG | 0.498276 | 7_3:-63105304 | None:intergenic |
| TGTAACGGTTGGAGTTGTTG+GGG | 0.499649 | 7_3:+63106007 | Msa1115620:CDS |
| ATGGTCTCATGTTGCGGGCA+CGG | 0.503401 | 7_3:+63107932 | Msa1115620:CDS |
| TCTGAGCAACTTGGTCAGAC+AGG | 0.503594 | 7_3:+63106050 | Msa1115620:CDS |
| TTCTCACACCTTTCGTGTGT+GGG | 0.506391 | 7_3:+63107888 | Msa1115620:CDS |
| GTTCTCACACCTTTCGTGTG+TGG | 0.509529 | 7_3:+63107887 | Msa1115620:CDS |
| TGTTGAATGTGTCACCTATT+GGG | 0.513383 | 7_3:+63106946 | Msa1115620:CDS |
| ACATTTGGAGTGACCATGGC+TGG | 0.517065 | 7_3:-63107832 | None:intergenic |
| TTCAAGTGGGACCCAACAAA+AGG | 0.519045 | 7_3:-63104885 | None:intergenic |
| TTCAATCTCTTATTTCTACC+TGG | 0.521380 | 7_3:+63104981 | Msa1115620:five_prime_UTR |
| AAGAAGATGGGTCTTGAATG+GGG | 0.522066 | 7_3:-63104960 | None:intergenic |
| ATAATGGCTGCCCTGAAACC+TGG | 0.534391 | 7_3:+63105294 | Msa1115620:exon |
| ACTGCTTGATAGTATCTTCA+GGG | 0.539223 | 7_3:-63108645 | None:intergenic |
| CAATTTCCATGGCATTGCTA+TGG | 0.546347 | 7_3:-63107958 | None:intergenic |
| CAGTGTACTTCTCTCTTCCT+GGG | 0.548504 | 7_3:+63108664 | Msa1115620:CDS |
| GGTACACAGATTGTAACGGT+TGG | 0.549280 | 7_3:+63105996 | Msa1115620:intron |
| CATTTATTGAGTTCCGTAGT+GGG | 0.550324 | 7_3:+63106922 | Msa1115620:CDS |
| AGCAATGATTTACAGAGGAG+CGG | 0.553993 | 7_3:+63108740 | Msa1115620:CDS |
| AACAAATTGAAGGCCAGCCA+TGG | 0.554616 | 7_3:+63107819 | Msa1115620:CDS |
| ATGAAATTTATGAATCTGAT+CGG | 0.555653 | 7_3:+63108427 | Msa1115620:CDS |
| AAAGCTTATCTGTCCTCCAA+TGG | 0.558484 | 7_3:-63107192 | None:intergenic |
| GCAATGATTTACAGAGGAGC+GGG | 0.561589 | 7_3:+63108741 | Msa1115620:CDS |
| ATCGCCGAGGAACAAATTGA+AGG | 0.562208 | 7_3:+63107809 | Msa1115620:CDS |
| CTTGATAGTATCTTCAGGGC+TGG | 0.567801 | 7_3:-63108641 | None:intergenic |
| CGGCTTCCATAGCAATGCCA+TGG | 0.571087 | 7_3:+63107952 | Msa1115620:CDS |
| GGAAGTATGGTCTCATGTTG+CGG | 0.571254 | 7_3:+63107926 | Msa1115620:CDS |
| GGATTTCATTGAAACCATCA+AGG | 0.573964 | 7_3:-63107350 | None:intergenic |
| AACTAGGTCCATAGGTCTTG+GGG | 0.583069 | 7_3:-63107867 | None:intergenic |
| GGTGTGAGAACTAGGTCCAT+AGG | 0.585234 | 7_3:-63107875 | None:intergenic |
| CCACACATTTGGAGTGACCA+TGG | 0.585950 | 7_3:-63107836 | None:intergenic |
| TATCATGGTACTTCACATTG+TGG | 0.588852 | 7_3:+63108805 | Msa1115620:CDS |
| ACATTTATTGAGTTCCGTAG+TGG | 0.588865 | 7_3:+63106921 | Msa1115620:CDS |
| AGGACAGCTCATTGGAACTC+AGG | 0.590199 | 7_3:+63106346 | Msa1115620:CDS |
| CATTGGGGATGAACAGCTCA+AGG | 0.593332 | 7_3:+63106519 | Msa1115620:CDS |
| GTAAAGATATCTGAGCAACT+TGG | 0.594397 | 7_3:+63106041 | Msa1115620:CDS |
| TTTGGGTACACAGATTGTAA+CGG | 0.605387 | 7_3:+63105992 | Msa1115620:intron |
| ATGGAACTCTTACAGCTCCA+AGG | 0.610758 | 7_3:+63105340 | Msa1115620:CDS |
| GGTCTTGTGGCTCATAAGCA+AGG | 0.614182 | 7_3:+63106326 | Msa1115620:CDS |
| GTAACGGTTGGAGTTGTTGG+GGG | 0.614289 | 7_3:+63106008 | Msa1115620:CDS |
| AACTCTTACAGCTCCAAGGA+AGG | 0.622019 | 7_3:+63105344 | Msa1115620:CDS |
| CCATGGTCACTCCAAATGTG+TGG | 0.626628 | 7_3:+63107836 | Msa1115620:CDS |
| TATTGATACTGGAAACAACA+TGG | 0.628384 | 7_3:+63108717 | Msa1115620:CDS |
| AGTTGAAGAGAAGATTCAAG+TGG | 0.634220 | 7_3:-63104899 | None:intergenic |
| TGAGAGTTCCCACACACGAA+AGG | 0.637134 | 7_3:-63107896 | None:intergenic |
| GAGCTTGAAGACATTCATTG+GGG | 0.646459 | 7_3:+63106504 | Msa1115620:intron |
| GATCGGACTATCGGGCACAC+AGG | 0.652693 | 7_3:+63108444 | Msa1115620:CDS |
| ATAATTATATTCGAATCATG+TGG | 0.657166 | 7_3:-63108764 | None:intergenic |
| GTTCATACAAGATCTACGAA+AGG | 0.660966 | 7_3:+63105836 | Msa1115620:CDS |
| ACACATTCAACATCCCACTA+CGG | 0.661979 | 7_3:-63106935 | None:intergenic |
| TCAAACAAAGCAATCACACC+AGG | 0.663993 | 7_3:-63105312 | None:intergenic |
| TGAGTTTGAGAAGTATGACA+AGG | 0.670641 | 7_3:+63106995 | Msa1115620:CDS |
| GTTGAAGAGAAGATTCAAGT+GGG | 0.678342 | 7_3:-63104898 | None:intergenic |
| CATGGAGCAATGATTTACAG+AGG | 0.714801 | 7_3:+63108735 | Msa1115620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTCTTATATAGATT+AGG | - | chr7_3:63106894-63106913 | None:intergenic | 10.0% |
| !!! | ATCTATATAAGAAAAATTTT+AGG | + | chr7_3:63106895-63106914 | Msa1115620:intron | 10.0% |
| !!! | TCTATATAAGAAAAATTTTA+GGG | + | chr7_3:63106896-63106915 | Msa1115620:intron | 10.0% |
| !!! | AATCAATTTTAGGATATTTA+GGG | - | chr7_3:63104845-63104864 | None:intergenic | 15.0% |
| !! | GTTTATATAATACTATAGAT+TGG | - | chr7_3:63104941-63104960 | None:intergenic | 15.0% |
| !! | TGATTAATAGTAAGTTATAA+TGG | + | chr7_3:63105278-63105297 | Msa1115620:exon | 15.0% |
| !! | AACAGTTGTTAAATAATTAA+TGG | + | chr7_3:63105562-63105581 | Msa1115620:intron | 15.0% |
| !!! | CTATATAAGAAAAATTTTAG+GGG | + | chr7_3:63106897-63106916 | Msa1115620:intron | 15.0% |
| !! | AAAGATAATTAACAACATAA+TGG | + | chr7_3:63107652-63107671 | Msa1115620:intron | 15.0% |
| !!! | TTTTCTTTTTTTTCTTTTTC+CGG | - | chr7_3:63108304-63108323 | None:intergenic | 15.0% |
| !! | AATGAAAAAGATAAAAGTTT+AGG | - | chr7_3:63108382-63108401 | None:intergenic | 15.0% |
| !!! | GAATCAATTTTAGGATATTT+AGG | - | chr7_3:63104846-63104865 | None:intergenic | 20.0% |
| !!! | GAGAATAAAGAATCAATTTT+AGG | - | chr7_3:63104855-63104874 | None:intergenic | 20.0% |
| !!! | AAATAGTTTTTTTTGCTTGA+AGG | + | chr7_3:63105217-63105236 | Msa1115620:intron | 20.0% |
| !! | TAAATAATTAATGGTTATGC+TGG | + | chr7_3:63105571-63105590 | Msa1115620:intron | 20.0% |
| !!! | ATTTCTTATTTCTGATTGTT+TGG | + | chr7_3:63105748-63105767 | Msa1115620:intron | 20.0% |
| !!! | TTTGTGAAAAAAATCGATTT+TGG | + | chr7_3:63106141-63106160 | Msa1115620:intron | 20.0% |
| !! | AAAACAATAATCATAGTCAT+TGG | - | chr7_3:63106297-63106316 | None:intergenic | 20.0% |
| !! | GAATAGGAAAAGAAATATAT+AGG | - | chr7_3:63106551-63106570 | None:intergenic | 20.0% |
| !!! | AATAACATAATGTATTTTGC+AGG | + | chr7_3:63106765-63106784 | Msa1115620:intron | 20.0% |
| !!! | TTATTTTTTGGTTAAGTGAT+AGG | + | chr7_3:63107251-63107270 | Msa1115620:intron | 20.0% |
| !! | ATTATATATATGTACTCTAC+AGG | + | chr7_3:63107287-63107306 | Msa1115620:intron | 20.0% |
| !! | TAGTACTTCACAATAAATTA+TGG | - | chr7_3:63107408-63107427 | None:intergenic | 20.0% |
| !! | TTGTGTAACAAGAATTTATT+TGG | + | chr7_3:63107531-63107550 | Msa1115620:intron | 20.0% |
| !! | AATTACCTAAAATCAATCAA+TGG | + | chr7_3:63107565-63107584 | Msa1115620:intron | 20.0% |
| !!! | TTTAAGAACTTTCAATTTTG+TGG | + | chr7_3:63108102-63108121 | Msa1115620:intron | 20.0% |
| !! | TCTAATTTATAATTCCATGA+TGG | - | chr7_3:63108224-63108243 | None:intergenic | 20.0% |
| !! | GGAATTATAAATTAGATTCT+TGG | + | chr7_3:63108228-63108247 | Msa1115620:intron | 20.0% |
| !! | ATGAAATTTATGAATCTGAT+CGG | + | chr7_3:63108427-63108446 | Msa1115620:CDS | 20.0% |
| !! | ATAATTATATTCGAATCATG+TGG | - | chr7_3:63108767-63108786 | None:intergenic | 20.0% |
| !!! | TTCTGATTGTAATTTTATCA+TGG | + | chr7_3:63108790-63108809 | Msa1115620:CDS | 20.0% |
| !! | GCATATCATTCAATTAAATT+TGG | + | chr7_3:63108840-63108859 | Msa1115620:exon | 20.0% |
| ! | AATAAGAGATTGAAGAAGAT+GGG | - | chr7_3:63104975-63104994 | None:intergenic | 25.0% |
| ! | AAATAAGAGATTGAAGAAGA+TGG | - | chr7_3:63104976-63104995 | None:intergenic | 25.0% |
| ! | TTTACCTCATATAACAACTT+GGG | + | chr7_3:63105044-63105063 | Msa1115620:intron | 25.0% |
| ! | GGTCATATTTATTTACTCAT+GGG | + | chr7_3:63105065-63105084 | Msa1115620:intron | 25.0% |
| ! | GAAAAGGTTCATAATATTGT+AGG | + | chr7_3:63105245-63105264 | Msa1115620:intron | 25.0% |
| ! | GTTCATAATATTGTAGGTTA+AGG | + | chr7_3:63105251-63105270 | Msa1115620:intron | 25.0% |
| !! | ATTTTACAATAAGTGAACTG+AGG | - | chr7_3:63105691-63105710 | None:intergenic | 25.0% |
| !! | TATTTCTGATTGTTTGGATT+TGG | + | chr7_3:63105754-63105773 | Msa1115620:intron | 25.0% |
| ! | AACAAAAAAGAGCAAAGAAT+AGG | - | chr7_3:63105939-63105958 | None:intergenic | 25.0% |
| !!! | AATCGATTTTTTTCACAAAG+TGG | - | chr7_3:63106140-63106159 | None:intergenic | 25.0% |
| ! | CATCCATTAAAATAACATAC+TGG | + | chr7_3:63106210-63106229 | Msa1115620:intron | 25.0% |
| !!! | AGACCAGTATGTTATTTTAA+TGG | - | chr7_3:63106216-63106235 | None:intergenic | 25.0% |
| !!! | GATTATTGTTTTTCTGAGAA+TGG | + | chr7_3:63106305-63106324 | Msa1115620:CDS | 25.0% |
| ! | TATTCAATTACAGATTGAGT+TGG | - | chr7_3:63106379-63106398 | None:intergenic | 25.0% |
| ! | CATTATAAAGCTTAGAAGAT+AGG | + | chr7_3:63106662-63106681 | Msa1115620:intron | 25.0% |
| !!! | GATACGGTGAATTTATTTTT+TGG | + | chr7_3:63107239-63107258 | Msa1115620:intron | 25.0% |
| ! | TATATATAATCAAGACCTGT+TGG | - | chr7_3:63107277-63107296 | None:intergenic | 25.0% |
| !!! | TTCAATGAAATCCACTTTTT+TGG | + | chr7_3:63107360-63107379 | Msa1115620:CDS | 25.0% |
| ! | AACAGAATAAGATAATTCTC+CGG | - | chr7_3:63107477-63107496 | None:intergenic | 25.0% |
| !!! | CATAACCATTGATTGATTTT+AGG | - | chr7_3:63107573-63107592 | None:intergenic | 25.0% |
| ! | CTAAAATCAATCAATGGTTA+TGG | + | chr7_3:63107571-63107590 | Msa1115620:intron | 25.0% |
| !! | TCATAAACTGACTAAAGTTT+TGG | - | chr7_3:63107691-63107710 | None:intergenic | 25.0% |
| ! | AAACTTTAGTCAGTTTATGA+TGG | + | chr7_3:63107691-63107710 | Msa1115620:intron | 25.0% |
| ! | AAAAAATGTAACACTGAGAA+AGG | - | chr7_3:63108016-63108035 | None:intergenic | 25.0% |
| !! | ATGCAAAAATCTAAAATGGT+GGG | - | chr7_3:63108063-63108082 | None:intergenic | 25.0% |
| !! | AATGCAAAAATCTAAAATGG+TGG | - | chr7_3:63108064-63108083 | None:intergenic | 25.0% |
| !! | ACCATTTTAGATTTTTGCAT+TGG | + | chr7_3:63108063-63108082 | Msa1115620:intron | 25.0% |
| !! | CCATTTTAGATTTTTGCATT+GGG | + | chr7_3:63108064-63108083 | Msa1115620:intron | 25.0% |
| ! | CTAAGTAGAAAGAAAATATG+TGG | - | chr7_3:63108172-63108191 | None:intergenic | 25.0% |
| !! | ATTTTCTTTCTACTTAGTTG+TGG | + | chr7_3:63108175-63108194 | Msa1115620:intron | 25.0% |
| ! | ATATCTCTATACAATGCTTA+GGG | - | chr7_3:63108335-63108354 | None:intergenic | 25.0% |
| ! | TATATCTCTATACAATGCTT+AGG | - | chr7_3:63108336-63108355 | None:intergenic | 25.0% |
| !! | TAAGCATTGTATAGAGATAT+AGG | + | chr7_3:63108335-63108354 | Msa1115620:intron | 25.0% |
| ! | GATCAGATTCATAAATTTCA+TGG | - | chr7_3:63108428-63108447 | None:intergenic | 25.0% |
| ! | ACTAAAAACCAAATAAATGC+TGG | + | chr7_3:63108562-63108581 | Msa1115620:intron | 25.0% |
| !!! | AAATAAATGCTGGTTCAAAA+CGG | + | chr7_3:63108572-63108591 | Msa1115620:intron | 25.0% |
| !! | GGAAAGTTTTCAATTTTGAC+AGG | - | chr7_3:63104824-63104843 | None:intergenic | 30.0% |
| !! | TTCAATCTCTTATTTCTACC+TGG | + | chr7_3:63104981-63105000 | Msa1115620:five_prime_UTR | 30.0% |
| CTTTACCTCATATAACAACT+TGG | + | chr7_3:63105043-63105062 | Msa1115620:intron | 30.0% | |
| GGGTCATATTTATTTACTCA+TGG | + | chr7_3:63105064-63105083 | Msa1115620:intron | 30.0% | |
| ! | CATGAAGTAAAAACAGCTTT+TGG | + | chr7_3:63105162-63105181 | Msa1115620:intron | 30.0% |
| !!! | CTTTTGGAACTACTTTCATT+GGG | + | chr7_3:63105178-63105197 | Msa1115620:intron | 30.0% |
| !! | ATTGCTTTGTTTGATGTTGA+TGG | + | chr7_3:63105321-63105340 | Msa1115620:CDS | 30.0% |
| AAAGAATAGAATACCTTCCT+TGG | - | chr7_3:63105360-63105379 | None:intergenic | 30.0% | |
| CTGAACAAAACTAAACAATG+TGG | + | chr7_3:63105725-63105744 | Msa1115620:intron | 30.0% | |
| AGAATAGGTTTATGCATGAT+TGG | - | chr7_3:63105924-63105943 | None:intergenic | 30.0% | |
| TGTTGAATCTTGCATTGTTT+GGG | + | chr7_3:63105975-63105994 | Msa1115620:intron | 30.0% | |
| TGAAGCATAATAAACCAAAG+TGG | - | chr7_3:63106089-63106108 | None:intergenic | 30.0% | |
| AATCTACTTGAATACATCGT+TGG | - | chr7_3:63106417-63106436 | None:intergenic | 30.0% | |
| ACAAAAAGTTAACGACATAG+GGG | - | chr7_3:63106448-63106467 | None:intergenic | 30.0% | |
| CACAAAAAGTTAACGACATA+GGG | - | chr7_3:63106449-63106468 | None:intergenic | 30.0% | |
| ACACAAAAAGTTAACGACAT+AGG | - | chr7_3:63106450-63106469 | None:intergenic | 30.0% | |
| AGATGTGTAATGTCTTGAAT+AGG | - | chr7_3:63106567-63106586 | None:intergenic | 30.0% | |
| TATTTATAGTATGCCTAGCA+TGG | - | chr7_3:63106606-63106625 | None:intergenic | 30.0% | |
| TTAGAAGATAGGTGAATGAA+GGG | + | chr7_3:63106673-63106692 | Msa1115620:intron | 30.0% | |
| ATCTCACTAACCTCTTAATA+GGG | - | chr7_3:63106834-63106853 | None:intergenic | 30.0% | |
| AATCTCACTAACCTCTTAAT+AGG | - | chr7_3:63106835-63106854 | None:intergenic | 30.0% | |
| ! | GACTCATATTGCAAATTTTC+AGG | - | chr7_3:63107097-63107116 | None:intergenic | 30.0% |
| !! | CTTAACTTGACATTTTCCAT+TGG | + | chr7_3:63107176-63107195 | Msa1115620:CDS | 30.0% |
| !! | AAGTTTTGTCACCAAAAAAG+TGG | - | chr7_3:63107374-63107393 | None:intergenic | 30.0% |
| !! | TTTTGGTGACAAAACTTACA+AGG | + | chr7_3:63107377-63107396 | Msa1115620:CDS | 30.0% |
| AAAATCATGCATATGAATCG+AGG | + | chr7_3:63107501-63107520 | Msa1115620:intron | 30.0% | |
| !! | TAAACTGACTAAAGTTTTGG+AGG | - | chr7_3:63107688-63107707 | None:intergenic | 30.0% |
| ! | TGCAAAAATCTAAAATGGTG+GGG | - | chr7_3:63108062-63108081 | None:intergenic | 30.0% |
| CCCAATGCAAAAATCTAAAA+TGG | - | chr7_3:63108067-63108086 | None:intergenic | 30.0% | |
| ! | CATTTTCACTTTATCCATCA+TGG | + | chr7_3:63108207-63108226 | Msa1115620:intron | 30.0% |
| !! | CTGTTTTATGATGATGTCAA+AGG | + | chr7_3:63108269-63108288 | Msa1115620:intron | 30.0% |
| ! | TTTTTCATTTTCACTGAGCA+GGG | + | chr7_3:63108393-63108412 | Msa1115620:intron | 30.0% |
| TATCATCATATGTACTTGTG+TGG | + | chr7_3:63108484-63108503 | Msa1115620:intron | 30.0% | |
| TTCACCATGTAACTGAAATT+CGG | - | chr7_3:63108516-63108535 | None:intergenic | 30.0% | |
| !! | GTTTTGAACCAGCATTTATT+TGG | - | chr7_3:63108573-63108592 | None:intergenic | 30.0% |
| CAGCATATCATTATTGATAC+TGG | + | chr7_3:63108706-63108725 | Msa1115620:CDS | 30.0% | |
| TATTGATACTGGAAACAACA+TGG | + | chr7_3:63108717-63108736 | Msa1115620:CDS | 30.0% | |
| ! | TCTTTCACGTTTCCTTTTGT+TGG | + | chr7_3:63104873-63104892 | Msa1115620:five_prime_UTR | 35.0% |
| ! | CTTTCACGTTTCCTTTTGTT+GGG | + | chr7_3:63104874-63104893 | Msa1115620:five_prime_UTR | 35.0% |
| GTTGAAGAGAAGATTCAAGT+GGG | - | chr7_3:63104901-63104920 | None:intergenic | 35.0% | |
| AGTTGAAGAGAAGATTCAAG+TGG | - | chr7_3:63104902-63104921 | None:intergenic | 35.0% | |
| ATGAAGAAGTGAGAATTACC+AGG | - | chr7_3:63105002-63105021 | None:intergenic | 35.0% | |
| ATGACCCAAGTTGTTATATG+AGG | - | chr7_3:63105051-63105070 | None:intergenic | 35.0% | |
| !!! | GCTTTTGGAACTACTTTCAT+TGG | + | chr7_3:63105177-63105196 | Msa1115620:intron | 35.0% |
| ATAATGACACTCCATCAGTA+GGG | + | chr7_3:63105385-63105404 | Msa1115620:intron | 35.0% | |
| CAAGAAAATAACCCTACTGA+TGG | - | chr7_3:63105399-63105418 | None:intergenic | 35.0% | |
| AACAACAATGTTGCCTATTG+CGG | - | chr7_3:63105650-63105669 | None:intergenic | 35.0% | |
| !!! | TTGTTTAGTTTTGTTCAGCG+AGG | - | chr7_3:63105723-63105742 | None:intergenic | 35.0% |
| GTTCATACAAGATCTACGAA+AGG | + | chr7_3:63105836-63105855 | Msa1115620:CDS | 35.0% | |
| CTGTTGAATCTTGCATTGTT+TGG | + | chr7_3:63105974-63105993 | Msa1115620:intron | 35.0% | |
| TTTGGGTACACAGATTGTAA+CGG | + | chr7_3:63105992-63106011 | Msa1115620:intron | 35.0% | |
| GTAAAGATATCTGAGCAACT+TGG | + | chr7_3:63106041-63106060 | Msa1115620:CDS | 35.0% | |
| GTTAGCTATAAGTTCCACTT+TGG | + | chr7_3:63106072-63106091 | Msa1115620:intron | 35.0% | |
| !! | CTTCAGTGTTTTGAACATGT+AGG | + | chr7_3:63106104-63106123 | Msa1115620:intron | 35.0% |
| GAGCAAAGAAGAAGAAAGTA+GGG | - | chr7_3:63106191-63106210 | None:intergenic | 35.0% | |
| TGAGCAAAGAAGAAGAAAGT+AGG | - | chr7_3:63106192-63106211 | None:intergenic | 35.0% | |
| GTAACTGCAACAAGCAAATA+GGG | - | chr7_3:63106275-63106294 | None:intergenic | 35.0% | |
| !! | TTTTTCTGAGAATGGTCTTG+TGG | + | chr7_3:63106313-63106332 | Msa1115620:CDS | 35.0% |
| !! | TCAATTACAGATTGAGTTGG+TGG | - | chr7_3:63106376-63106395 | None:intergenic | 35.0% |
| AAGTAATTCACAACTCATCG+TGG | - | chr7_3:63106479-63106498 | None:intergenic | 35.0% | |
| AGAGCTTGAAGACATTCATT+GGG | + | chr7_3:63106503-63106522 | Msa1115620:intron | 35.0% | |
| CTTAGAAGATAGGTGAATGA+AGG | + | chr7_3:63106672-63106691 | Msa1115620:intron | 35.0% | |
| TAGAAGATAGGTGAATGAAG+GGG | + | chr7_3:63106674-63106693 | Msa1115620:intron | 35.0% | |
| ACTTGGATATCCCTATTAAG+AGG | + | chr7_3:63106821-63106840 | Msa1115620:CDS | 35.0% | |
| ACATTTATTGAGTTCCGTAG+TGG | + | chr7_3:63106921-63106940 | Msa1115620:CDS | 35.0% | |
| CATTTATTGAGTTCCGTAGT+GGG | + | chr7_3:63106922-63106941 | Msa1115620:CDS | 35.0% | |
| ATGTTGAATGTGTCACCTAT+TGG | + | chr7_3:63106945-63106964 | Msa1115620:CDS | 35.0% | |
| TGTTGAATGTGTCACCTATT+GGG | + | chr7_3:63106946-63106965 | Msa1115620:CDS | 35.0% | |
| CAAACTCATCTCTTTCTTCT+TGG | - | chr7_3:63106983-63107002 | None:intergenic | 35.0% | |
| ! | TGAGTTTGAGAAGTATGACA+AGG | + | chr7_3:63106995-63107014 | Msa1115620:CDS | 35.0% |
| AATTTGCAATATGAGTCCTC+AGG | + | chr7_3:63107100-63107119 | Msa1115620:intron | 35.0% | |
| TCAGAACATACGCTCAAAAA+TGG | + | chr7_3:63107124-63107143 | Msa1115620:CDS | 35.0% | |
| ! | AACTTGACATTTTCCATTGG+AGG | + | chr7_3:63107179-63107198 | Msa1115620:CDS | 35.0% |
| TCACGATCTTCATAGTGATA+CGG | + | chr7_3:63107223-63107242 | Msa1115620:intron | 35.0% | |
| ! | ATGTTTTATCCCAACCTTGA+GGG | - | chr7_3:63107317-63107336 | None:intergenic | 35.0% |
| ! | TATGTTTTATCCCAACCTTG+AGG | - | chr7_3:63107318-63107337 | None:intergenic | 35.0% |
| GGATTTCATTGAAACCATCA+AGG | - | chr7_3:63107353-63107372 | None:intergenic | 35.0% | |
| ACAATTCTCTTGCAAAGTGA+AGG | - | chr7_3:63107718-63107737 | None:intergenic | 35.0% | |
| AAATGGGAATTGCGCAAAAA+TGG | - | chr7_3:63107783-63107802 | None:intergenic | 35.0% | |
| CTTATTGAAGCCAATTTCCA+TGG | - | chr7_3:63107972-63107991 | None:intergenic | 35.0% | |
| ATGTCAAAGGAAATTGCAAC+CGG | + | chr7_3:63108282-63108301 | Msa1115620:intron | 35.0% | |
| !! | CTTTTTCATTTTCACTGAGC+AGG | + | chr7_3:63108392-63108411 | Msa1115620:intron | 35.0% |
| TATGAATCTGATCGGACTAT+CGG | + | chr7_3:63108435-63108454 | Msa1115620:CDS | 35.0% | |
| ATGACCGAATTTCAGTTACA+TGG | + | chr7_3:63108509-63108528 | Msa1115620:intron | 35.0% | |
| ACGATCAATATTAACGCGTA+AGG | - | chr7_3:63108611-63108630 | None:intergenic | 35.0% | |
| ! | ACTGCTTGATAGTATCTTCA+GGG | - | chr7_3:63108648-63108667 | None:intergenic | 35.0% |
| TGCAAAAATCTTAATGTCCC+AGG | - | chr7_3:63108684-63108703 | None:intergenic | 35.0% | |
| TATCATGGTACTTCACATTG+TGG | + | chr7_3:63108805-63108824 | Msa1115620:CDS | 35.0% | |
| AAGAAGATGGGTCTTGAATG+GGG | - | chr7_3:63104963-63104982 | None:intergenic | 40.0% | |
| GAAGAAGATGGGTCTTGAAT+GGG | - | chr7_3:63104964-63104983 | None:intergenic | 40.0% | |
| TGAAGAAGATGGGTCTTGAA+TGG | - | chr7_3:63104965-63104984 | None:intergenic | 40.0% | |
| TTGCTTGAAGGTTGCTGAAA+AGG | + | chr7_3:63105229-63105248 | Msa1115620:intron | 40.0% | |
| TCAAACAAAGCAATCACACC+AGG | - | chr7_3:63105315-63105334 | None:intergenic | 40.0% | |
| GATAATGACACTCCATCAGT+AGG | + | chr7_3:63105384-63105403 | Msa1115620:intron | 40.0% | |
| TGTTGCCTACTCAATTGCTA+GGG | + | chr7_3:63105792-63105811 | Msa1115620:intron | 40.0% | |
| TGTATGAACTGCAACATCTC+TGG | - | chr7_3:63105825-63105844 | None:intergenic | 40.0% | |
| ATTGTAACGGTTGGAGTTGT+TGG | + | chr7_3:63106005-63106024 | Msa1115620:CDS | 40.0% | |
| TTGTAACGGTTGGAGTTGTT+GGG | + | chr7_3:63106006-63106025 | Msa1115620:CDS | 40.0% | |
| GGTAACTGCAACAAGCAAAT+AGG | - | chr7_3:63106276-63106295 | None:intergenic | 40.0% | |
| CTTGAATACATCGTTGGTCA+CGG | - | chr7_3:63106411-63106430 | None:intergenic | 40.0% | |
| CAGAGCTTGAAGACATTCAT+TGG | + | chr7_3:63106502-63106521 | Msa1115620:intron | 40.0% | |
| GAGCTTGAAGACATTCATTG+GGG | + | chr7_3:63106504-63106523 | Msa1115620:intron | 40.0% | |
| ! | GCTTCATTACATTGCTGACT+TGG | + | chr7_3:63106804-63106823 | Msa1115620:CDS | 40.0% |
| ACACATTCAACATCCCACTA+CGG | - | chr7_3:63106938-63106957 | None:intergenic | 40.0% | |
| AAAGCTTATCTGTCCTCCAA+TGG | - | chr7_3:63107195-63107214 | None:intergenic | 40.0% | |
| TACTGCTTGAGATACCTTGA+TGG | + | chr7_3:63107336-63107355 | Msa1115620:CDS | 40.0% | |
| CGAGTCTCTTCTTGAATGAA+GGG | - | chr7_3:63107632-63107651 | None:intergenic | 40.0% | |
| TCGAGTCTCTTCTTGAATGA+AGG | - | chr7_3:63107633-63107652 | None:intergenic | 40.0% | |
| ! | AATTTGTTCCTCGGCGATTA+GGG | - | chr7_3:63107807-63107826 | None:intergenic | 40.0% |
| CTCTCATGAATCAGGAAGTA+TGG | + | chr7_3:63107913-63107932 | Msa1115620:CDS | 40.0% | |
| CAATTTCCATGGCATTGCTA+TGG | - | chr7_3:63107961-63107980 | None:intergenic | 40.0% | |
| CATAGCAATGCCATGGAAAT+TGG | + | chr7_3:63107959-63107978 | Msa1115620:CDS | 40.0% | |
| ! | AAAATCTAAAATGGTGGGGC+AGG | - | chr7_3:63108058-63108077 | None:intergenic | 40.0% |
| ATGAATCTGATCGGACTATC+GGG | + | chr7_3:63108436-63108455 | Msa1115620:CDS | 40.0% | |
| ATTAACGCGTAAGGTTCACA+TGG | - | chr7_3:63108602-63108621 | None:intergenic | 40.0% | |
| ! | CACTGCTTGATAGTATCTTC+AGG | - | chr7_3:63108649-63108668 | None:intergenic | 40.0% |
| CATGGAGCAATGATTTACAG+AGG | + | chr7_3:63108735-63108754 | Msa1115620:CDS | 40.0% | |
| AGCAATGATTTACAGAGGAG+CGG | + | chr7_3:63108740-63108759 | Msa1115620:CDS | 40.0% | |
| TTCAAGTGGGACCCAACAAA+AGG | - | chr7_3:63104888-63104907 | None:intergenic | 45.0% | |
| AGCAATCACACCAGGTTTCA+GGG | - | chr7_3:63105307-63105326 | None:intergenic | 45.0% | |
| AAGCAATCACACCAGGTTTC+AGG | - | chr7_3:63105308-63105327 | None:intergenic | 45.0% | |
| ATGGAACTCTTACAGCTCCA+AGG | + | chr7_3:63105340-63105359 | Msa1115620:CDS | 45.0% | |
| AACTCTTACAGCTCCAAGGA+AGG | + | chr7_3:63105344-63105363 | Msa1115620:CDS | 45.0% | |
| TTGCGGATCGTGGAAAACAA+CGG | - | chr7_3:63105633-63105652 | None:intergenic | 45.0% | |
| ! | TGTTTTCCACGATCCGCAAT+AGG | + | chr7_3:63105634-63105653 | Msa1115620:intron | 45.0% |
| CTGTTGCCTACTCAATTGCT+AGG | + | chr7_3:63105791-63105810 | Msa1115620:intron | 45.0% | |
| GTTGCCTACTCAATTGCTAG+GGG | + | chr7_3:63105793-63105812 | Msa1115620:intron | 45.0% | |
| TTGCCTACTCAATTGCTAGG+GGG | + | chr7_3:63105794-63105813 | Msa1115620:intron | 45.0% | |
| ! | CAAGATCTACGAAAGGTGTG+TGG | + | chr7_3:63105843-63105862 | Msa1115620:intron | 45.0% |
| ! | TCTACGAAAGGTGTGTGGTT+TGG | + | chr7_3:63105848-63105867 | Msa1115620:intron | 45.0% |
| GGTACACAGATTGTAACGGT+TGG | + | chr7_3:63105996-63106015 | Msa1115620:intron | 45.0% | |
| TGTAACGGTTGGAGTTGTTG+GGG | + | chr7_3:63106007-63106026 | Msa1115620:CDS | 45.0% | |
| TGCAACAAGCAAATAGGGAC+AGG | - | chr7_3:63106270-63106289 | None:intergenic | 45.0% | |
| CATAAGCAAGGACAGCTCAT+TGG | + | chr7_3:63106338-63106357 | Msa1115620:CDS | 45.0% | |
| GGATGAACAGCTCAAGGTAA+AGG | + | chr7_3:63106525-63106544 | Msa1115620:intron | 45.0% | |
| !!! | TTTTCTGAGACTGCCATGCT+AGG | + | chr7_3:63106590-63106609 | Msa1115620:intron | 45.0% |
| TGGCTACAGTTTCTCCCAAT+AGG | - | chr7_3:63106963-63106982 | None:intergenic | 45.0% | |
| TGGTTAAGTGATAGGCCAAC+AGG | + | chr7_3:63107259-63107278 | Msa1115620:intron | 45.0% | |
| ! | ACTCTACAGGTTTTCCCTCA+AGG | + | chr7_3:63107300-63107319 | Msa1115620:intron | 45.0% |
| ! | TACAGGTTTTCCCTCAAGGT+TGG | + | chr7_3:63107304-63107323 | Msa1115620:intron | 45.0% |
| ! | ACAGGTTTTCCCTCAAGGTT+GGG | + | chr7_3:63107305-63107324 | Msa1115620:intron | 45.0% |
| !! | GCGCAAAAATGGACTGCTTA+TGG | - | chr7_3:63107772-63107791 | None:intergenic | 45.0% |
| ! | CAATTTGTTCCTCGGCGATT+AGG | - | chr7_3:63107808-63107827 | None:intergenic | 45.0% |
| ATCGCCGAGGAACAAATTGA+AGG | + | chr7_3:63107809-63107828 | Msa1115620:CDS | 45.0% | |
| ! | CTGGCCTTCAATTTGTTCCT+CGG | - | chr7_3:63107816-63107835 | None:intergenic | 45.0% |
| AACAAATTGAAGGCCAGCCA+TGG | + | chr7_3:63107819-63107838 | Msa1115620:CDS | 45.0% | |
| AACTAGGTCCATAGGTCTTG+GGG | - | chr7_3:63107870-63107889 | None:intergenic | 45.0% | |
| GAACTAGGTCCATAGGTCTT+GGG | - | chr7_3:63107871-63107890 | None:intergenic | 45.0% | |
| AGAACTAGGTCCATAGGTCT+TGG | - | chr7_3:63107872-63107891 | None:intergenic | 45.0% | |
| ! | ACACGAAAGGTGTGAGAACT+AGG | - | chr7_3:63107886-63107905 | None:intergenic | 45.0% |
| TTCTCACACCTTTCGTGTGT+GGG | + | chr7_3:63107888-63107907 | Msa1115620:CDS | 45.0% | |
| TGTGGGAACTCTCATGAATC+AGG | + | chr7_3:63107905-63107924 | Msa1115620:CDS | 45.0% | |
| ! | GGAAGTATGGTCTCATGTTG+CGG | + | chr7_3:63107926-63107945 | Msa1115620:CDS | 45.0% |
| GAAGTATGGTCTCATGTTGC+GGG | + | chr7_3:63107927-63107946 | Msa1115620:CDS | 45.0% | |
| ! | TTCATTTTCACTGAGCAGGG+TGG | + | chr7_3:63108396-63108415 | Msa1115620:intron | 45.0% |
| ! | CTTGATAGTATCTTCAGGGC+TGG | - | chr7_3:63108644-63108663 | None:intergenic | 45.0% |
| CAGTGTACTTCTCTCTTCCT+GGG | + | chr7_3:63108664-63108683 | Msa1115620:CDS | 45.0% | |
| GCAATGATTTACAGAGGAGC+GGG | + | chr7_3:63108741-63108760 | Msa1115620:CDS | 45.0% | |
| ATAATGGCTGCCCTGAAACC+TGG | + | chr7_3:63105294-63105313 | Msa1115620:exon | 50.0% | |
| ATGTTGCCTATTGCGGATCG+TGG | - | chr7_3:63105643-63105662 | None:intergenic | 50.0% | |
| TAGCCCCCTAGCAATTGAGT+AGG | - | chr7_3:63105800-63105819 | None:intergenic | 50.0% | |
| GTAACGGTTGGAGTTGTTGG+GGG | + | chr7_3:63106008-63106027 | Msa1115620:CDS | 50.0% | |
| TCTGAGCAACTTGGTCAGAC+AGG | + | chr7_3:63106050-63106069 | Msa1115620:CDS | 50.0% | |
| ! | GGTCTTGTGGCTCATAAGCA+AGG | + | chr7_3:63106326-63106345 | Msa1115620:CDS | 50.0% |
| AGGACAGCTCATTGGAACTC+AGG | + | chr7_3:63106346-63106365 | Msa1115620:CDS | 50.0% | |
| GAATACATCGTTGGTCACGG+TGG | - | chr7_3:63106408-63106427 | None:intergenic | 50.0% | |
| CATTGGGGATGAACAGCTCA+AGG | + | chr7_3:63106519-63106538 | Msa1115620:CDS | 50.0% | |
| ! | GAGCGTATGTTCTGAACCTG+AGG | - | chr7_3:63107119-63107138 | None:intergenic | 50.0% |
| GCCTCTGTGCATTCATATGC+CGG | + | chr7_3:63107455-63107474 | Msa1115620:intron | 50.0% | |
| TCCGGCATATGAATGCACAG+AGG | - | chr7_3:63107459-63107478 | None:intergenic | 50.0% | |
| CCTCGGCGATTAGGGAAAAT+GGG | - | chr7_3:63107799-63107818 | None:intergenic | 50.0% | |
| TCCTCGGCGATTAGGGAAAA+TGG | - | chr7_3:63107800-63107819 | None:intergenic | 50.0% | |
| ! | ACATTTGGAGTGACCATGGC+TGG | - | chr7_3:63107835-63107854 | None:intergenic | 50.0% |
| ! | CCACACATTTGGAGTGACCA+TGG | - | chr7_3:63107839-63107858 | None:intergenic | 50.0% |
| CCATGGTCACTCCAAATGTG+TGG | + | chr7_3:63107836-63107855 | Msa1115620:CDS | 50.0% | |
| GGGCGAGAATTCCACACATT+TGG | - | chr7_3:63107850-63107869 | None:intergenic | 50.0% | |
| AATTCTCGCCCCAAGACCTA+TGG | + | chr7_3:63107859-63107878 | Msa1115620:CDS | 50.0% | |
| GGTGTGAGAACTAGGTCCAT+AGG | - | chr7_3:63107878-63107897 | None:intergenic | 50.0% | |
| GTTCTCACACCTTTCGTGTG+TGG | + | chr7_3:63107887-63107906 | Msa1115620:CDS | 50.0% | |
| TGAGAGTTCCCACACACGAA+AGG | - | chr7_3:63107899-63107918 | None:intergenic | 50.0% | |
| ! | ATCTAAAATGGTGGGGCAGG+TGG | - | chr7_3:63108055-63108074 | None:intergenic | 50.0% |
| GCAGTGTACTTCTCTCTTCC+TGG | + | chr7_3:63108663-63108682 | Msa1115620:CDS | 50.0% | |
| ! | CCCATTTTCCCTAATCGCCG+AGG | + | chr7_3:63107796-63107815 | Msa1115620:CDS | 55.0% |
| ATGGTCTCATGTTGCGGGCA+CGG | + | chr7_3:63107932-63107951 | Msa1115620:CDS | 55.0% | |
| CGGCTTCCATAGCAATGCCA+TGG | + | chr7_3:63107952-63107971 | Msa1115620:CDS | 55.0% | |
| GATCGGACTATCGGGCACAC+AGG | + | chr7_3:63108444-63108463 | Msa1115620:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 63104815 | 63108891 | 63104815 | ID=Msa1115620;Name=Msa1115620 |
| chr7_3 | mRNA | 63104815 | 63108891 | 63104815 | ID=Msa1115620-mRNA-1;Parent=Msa1115620;Name=Msa1115620-mRNA-1;_AED=0.18;_eAED=0.18;_QI=218|0.83|0.92|1|0.91|0.84|13|35|372 |
| chr7_3 | exon | 63104815 | 63105002 | 63104815 | ID=Msa1115620-mRNA-1:exon:14678;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63105267 | 63105365 | 63105267 | ID=Msa1115620-mRNA-1:exon:14679;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63105813 | 63105857 | 63105813 | ID=Msa1115620-mRNA-1:exon:14680;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63106005 | 63106071 | 63106005 | ID=Msa1115620-mRNA-1:exon:14681;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63106291 | 63106367 | 63106291 | ID=Msa1115620-mRNA-1:exon:14682;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63106505 | 63106540 | 63106505 | ID=Msa1115620-mRNA-1:exon:14683;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63106787 | 63106842 | 63106787 | ID=Msa1115620-mRNA-1:exon:14684;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63106917 | 63107016 | 63106917 | ID=Msa1115620-mRNA-1:exon:14685;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63107122 | 63107217 | 63107122 | ID=Msa1115620-mRNA-1:exon:14686;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63107309 | 63107398 | 63107309 | ID=Msa1115620-mRNA-1:exon:14687;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63107779 | 63107990 | 63107779 | ID=Msa1115620-mRNA-1:exon:14688;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63108414 | 63108465 | 63108414 | ID=Msa1115620-mRNA-1:exon:14689;Parent=Msa1115620-mRNA-1 |
| chr7_3 | exon | 63108638 | 63108891 | 63108638 | ID=Msa1115620-mRNA-1:exon:14690;Parent=Msa1115620-mRNA-1 |
| chr7_3 | five_prime_UTR | 63104815 | 63105002 | 63104815 | ID=Msa1115620-mRNA-1:five_prime_utr;Parent=Msa1115620-mRNA-1 |
| chr7_3 | five_prime_UTR | 63105267 | 63105296 | 63105267 | ID=Msa1115620-mRNA-1:five_prime_utr;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63105297 | 63105365 | 63105297 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63105813 | 63105857 | 63105813 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63106005 | 63106071 | 63106005 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63106291 | 63106367 | 63106291 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63106505 | 63106540 | 63106505 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63106787 | 63106842 | 63106787 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63106917 | 63107016 | 63106917 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63107122 | 63107217 | 63107122 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63107309 | 63107398 | 63107309 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63107779 | 63107990 | 63107779 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63108414 | 63108465 | 63108414 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | CDS | 63108638 | 63108856 | 63108638 | ID=Msa1115620-mRNA-1:cds;Parent=Msa1115620-mRNA-1 |
| chr7_3 | three_prime_UTR | 63108857 | 63108891 | 63108857 | ID=Msa1115620-mRNA-1:three_prime_utr;Parent=Msa1115620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
