AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0659030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0659030 MtrunA17_Chr8g0383281 97.541 244 6 0 1 244 1 244 4.61e-170 468
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0659030 AT2G21870.1 68.852 244 72 2 1 244 1 240 1.03e-116 333
Msa0659030 AT2G21870.2 69.058 223 66 1 1 223 1 220 1.91e-107 309

Find 101 sgRNAs with CRISPR-Local

Find 594 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGATGGATGCAATCAAAAT+TGG 0.209780 4_3:-69269484 None:intergenic
TTCCAGATTTCAGAGGAATT+TGG 0.214510 4_3:-69269379 None:intergenic
AAAATATTGCATTTGGATAA+TGG 0.231041 4_3:+69269278 Msa0659030:three_prime_UTR
CTTTCTTATCATTTCTCAAT+AGG 0.249875 4_3:-69268062 None:intergenic
AGCAAAGGGATGTTAGATTA+AGG 0.250896 4_3:+69265327 None:intergenic
AATCTTCAAACTGGCTTCAT+TGG 0.276927 4_3:-69269330 None:intergenic
AAATGAGGAACAAACCAATT+TGG 0.277914 4_3:-69265561 None:intergenic
CTTTCTCTGTAACGCGAGTT+AGG 0.283829 4_3:-69265488 None:intergenic
TTTCTTATCATTTCTCAATA+GGG 0.290599 4_3:-69268061 None:intergenic
GCAACGGGAGTTTGCTGTTC+CGG 0.291400 4_3:+69266094 Msa0659030:CDS
TTCCAAATTCCTCTGAAATC+TGG 0.301785 4_3:+69269377 Msa0659030:three_prime_UTR
GGAACAAACCAATTTGGATT+TGG 0.309292 4_3:-69265555 None:intergenic
ACATTATAAAATATTGCATT+TGG 0.309979 4_3:+69269271 Msa0659030:three_prime_UTR
CCTCGCATCCAAATCCAAAT+TGG 0.317568 4_3:+69265547 Msa0659030:CDS
AAAAGCTATTGATGAGGAAT+AGG 0.318100 4_3:+69265390 Msa0659030:five_prime_UTR
CGGTTCGCCACTTTGCTAAA+GGG 0.331571 4_3:+69266114 Msa0659030:CDS
GAAAGGAATGGACCTTCTTT+TGG 0.332132 4_3:+69268080 Msa0659030:CDS
GGCTTTAATGTTTGATGCAT+TGG 0.345705 4_3:+69268011 Msa0659030:CDS
GTCCGAACTTCCTGCCCTTA+AGG 0.348865 4_3:+69266145 Msa0659030:CDS
CCGGTTCGCCACTTTGCTAA+AGG 0.349850 4_3:+69266113 Msa0659030:CDS
CTACTCTTGGTATAGCTGTA+TGG 0.353049 4_3:+69266056 Msa0659030:intron
CTTGGTTCTTATTTCCTTCA+AGG 0.354224 4_3:-69266806 None:intergenic
CGGTCAAATGCTTCTGCAAC+GGG 0.382485 4_3:+69266079 Msa0659030:CDS
AGACTGCCATCGGAATATTA+AGG 0.383428 4_3:+69266466 Msa0659030:CDS
GGAACTCACCGTCTCCCTTA+AGG 0.389313 4_3:-69266160 None:intergenic
TCCCTTAAGGGCAGGAAGTT+CGG 0.389587 4_3:-69266147 None:intergenic
TTACACTTTGATTCATAACT+TGG 0.399416 4_3:+69269586 Msa0659030:three_prime_UTR
GCAGCTGGAGGAGTTGAAAA+AGG 0.399996 4_3:+69268756 Msa0659030:CDS
GAAACAGCAGCTGGATCCTC+TGG 0.403842 4_3:-69266510 None:intergenic
AAAAGATAAGTTCGAGCATC+AGG 0.404959 4_3:-69266781 None:intergenic
TCCGAACTTCCTGCCCTTAA+GGG 0.407807 4_3:+69266146 Msa0659030:CDS
TCCAGCTGCTCTTCGTACTT+TGG 0.409891 4_3:-69268715 None:intergenic
TCTTCTCTCTCTCTATTCAA+TGG 0.413001 4_3:-69265429 None:intergenic
TCACATTAATAAGAATAATC+CGG 0.413219 4_3:-69269452 None:intergenic
CAACTCCTCCAGCTGCGCTT+TGG 0.413594 4_3:-69268749 None:intergenic
CCATTTCAGGGAGGAATTCA+AGG 0.418093 4_3:+69269173 Msa0659030:intron
ATCCATCTATTCTTCGATAT+AGG 0.420345 4_3:+69269498 Msa0659030:three_prime_UTR
TGCCTATATCGAAGAATAGA+TGG 0.420754 4_3:-69269500 None:intergenic
GAACTCACCGTCTCCCTTAA+GGG 0.425131 4_3:-69266159 None:intergenic
TAAAATAGCCAAAGCGCAGC+TGG 0.425620 4_3:+69268741 Msa0659030:CDS
AAACTCAAGAATCTTCAAAC+TGG 0.436944 4_3:-69269339 None:intergenic
TGCATTGGAGAAAATTGAAA+AGG 0.441090 4_3:+69268026 Msa0659030:CDS
GCAAAGGGATGTTAGATTAA+GGG 0.444003 4_3:+69265328 None:intergenic
GGCAGGAAGTTCGGACCCTT+CGG 0.446173 4_3:-69266138 None:intergenic
TTTCTCTGTAACGCGAGTTA+GGG 0.451921 4_3:-69265487 None:intergenic
TACACTTTGATTCATAACTT+GGG 0.454071 4_3:+69269587 Msa0659030:three_prime_UTR
AGATGGATGCAATCAAAATT+GGG 0.466219 4_3:-69269483 None:intergenic
TTCTTATCATTTCTCAATAG+GGG 0.468292 4_3:-69268060 None:intergenic
CCTTTAGCAAAGTGGCGAAC+CGG 0.468347 4_3:-69266113 None:intergenic
GATTATTCTTATTAATGTGA+TGG 0.470508 4_3:+69269455 Msa0659030:three_prime_UTR
ACGTCAAAACTTTGGACATC+CGG 0.475716 4_3:+69269214 Msa0659030:CDS
AGAGGTCTTACAGATGATCT+TGG 0.479321 4_3:+69267982 Msa0659030:CDS
AGCTGGATCCTCTGGAGCTA+TGG 0.481115 4_3:-69266502 None:intergenic
GGCGGTTGACGTCAAAACTT+TGG 0.482257 4_3:+69269206 Msa0659030:CDS
GAATTCACAAAAGAGAAGAC+TGG 0.486112 4_3:+69269558 Msa0659030:three_prime_UTR
GCCAAAGTACGAAGAGCAGC+TGG 0.499498 4_3:+69268714 Msa0659030:CDS
CACATTAATAAGAATAATCC+GGG 0.506246 4_3:-69269451 None:intergenic
AAAGCTATTGATGAGGAATA+GGG 0.506848 4_3:+69265391 Msa0659030:five_prime_UTR
CAATGGAAACTCAAAAGAAA+AGG 0.507343 4_3:+69268791 Msa0659030:CDS
CTCCTTCCTTAATATTCCGA+TGG 0.511981 4_3:-69266472 None:intergenic
CACTTTGCTAAAGGGTCCGA+AGG 0.513405 4_3:+69266122 Msa0659030:CDS
AATGGAAGTAATCATCATGT+TGG 0.521668 4_3:-69269621 None:intergenic
CAGGGCAAACTTGTTGTCAG+TGG 0.523119 4_3:+69266714 Msa0659030:intron
TATCAAACTCTGCCAAAAGA+AGG 0.529881 4_3:-69268092 None:intergenic
GGGAGTAGAATATATCGAAC+GGG 0.530283 4_3:+69265356 Msa0659030:five_prime_UTR
TATATCGAACGGGTGAGATA+AGG 0.531715 4_3:+69265366 Msa0659030:five_prime_UTR
AAAGGATGCTGTTGAGGCAA+TGG 0.541346 4_3:+69268774 Msa0659030:CDS
TATTTAAAATACTCAAATGA+CGG 0.542670 4_3:-69269524 None:intergenic
GAGAAATGATAAGAAAGGAA+TGG 0.544368 4_3:+69268068 Msa0659030:CDS
TCACCGTCTCCCTTAAGGGC+AGG 0.548905 4_3:-69266155 None:intergenic
ACACTTTGATTCATAACTTG+GGG 0.551500 4_3:+69269588 Msa0659030:three_prime_UTR
AATTCACAAAAGAGAAGACT+GGG 0.564252 4_3:+69269559 Msa0659030:three_prime_UTR
GCATATTGAGAAACAGCAGC+TGG 0.566573 4_3:-69266519 None:intergenic
GCGGTCAAATGCTTCTGCAA+CGG 0.569422 4_3:+69266078 Msa0659030:CDS
AACAAATTTGAGACTGCCAT+CGG 0.570816 4_3:+69266456 Msa0659030:CDS
ATGTTAGATTAAGGGACGGA+GGG 0.571313 4_3:+69265336 None:intergenic
TACAGATGATCTTGGAGCAG+AGG 0.572998 4_3:+69267990 Msa0659030:CDS
CTTCAACTTCCAGATTTCAG+AGG 0.582652 4_3:-69269386 None:intergenic
TGCTGTTTCTCAATATGCGA+AGG 0.586233 4_3:+69266524 Msa0659030:CDS
TCTATTCAATGGTGAAGTGA+AGG 0.589938 4_3:-69265418 None:intergenic
CTTCGGACCCTTTAGCAAAG+TGG 0.597464 4_3:-69266121 None:intergenic
GTCAGTGGCTCAAGATGTCA+AGG 0.601887 4_3:+69266729 Msa0659030:CDS
CCAATTTGGATTTGGATGCG+AGG 0.606244 4_3:-69265547 None:intergenic
GTCTACTTATTGAAGAAACA+TGG 0.615133 4_3:-69269306 None:intergenic
GAAGATCACCATAGCTCCAG+AGG 0.616565 4_3:+69266494 Msa0659030:CDS
ATTGCATTTGGATAATGGTG+AGG 0.618610 4_3:+69269283 Msa0659030:three_prime_UTR
GATGTTAGATTAAGGGACGG+AGG 0.619124 4_3:+69265335 None:intergenic
CTTCCTGCCCTTAAGGGAGA+CGG 0.620584 4_3:+69266152 Msa0659030:CDS
TGCCATCGGAATATTAAGGA+AGG 0.622802 4_3:+69266470 Msa0659030:CDS
TAAGGTAAAAGCTATTGATG+AGG 0.623192 4_3:+69265384 Msa0659030:five_prime_UTR
AGGGAGTAGAATATATCGAA+CGG 0.625663 4_3:+69265355 Msa0659030:five_prime_UTR
GGAATTCAAGGATGAGCCTG+CGG 0.631780 4_3:+69269185 Msa0659030:CDS
CTATTGAGAAATGATAAGAA+AGG 0.632519 4_3:+69268063 Msa0659030:CDS
CACAAAAGAGAAGACTGGGA+TGG 0.649122 4_3:+69269563 Msa0659030:three_prime_UTR
AATAGCCAAAGCGCAGCTGG+AGG 0.651823 4_3:+69268744 Msa0659030:CDS
ATACTGTATCTAAATAAACA+TGG 0.657035 4_3:-69269661 None:intergenic
ATTCAAGGATGAGCCTGCGG+CGG 0.666945 4_3:+69269188 Msa0659030:CDS
AGGGATGTTAGATTAAGGGA+CGG 0.678158 4_3:+69265332 None:intergenic
GAGGCGTGAAGCGAGTGCCA+TGG 0.683570 4_3:-69265528 None:intergenic
ACTTTGCTAAAGGGTCCGAA+GGG 0.685539 4_3:+69266123 Msa0659030:CDS
CTCTTGGTATAGCTGTATGG+CGG 0.687511 4_3:+69266059 Msa0659030:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATAATTTTTATGATG+AGG - chr4_3:69265883-69265902 None:intergenic 10.0%
!! ATAATAATAATAACAATTCA+GGG - chr4_3:69267751-69267770 None:intergenic 10.0%
!! AATAATAATAATAACAATTC+AGG - chr4_3:69267752-69267771 None:intergenic 10.0%
!!! GATTTTTAAATATTATTTTC+TGG + chr4_3:69268232-69268251 Msa0659030:intron 10.0%
!!! TATAATTACTTTACTTATTT+TGG + chr4_3:69268623-69268642 Msa0659030:intron 10.0%
!! AATAAAAAAAAAAAAAAAGC+AGG - chr4_3:69268914-69268933 None:intergenic 10.0%
!! AAGATTGTTTAAAAAAAAAA+GGG - chr4_3:69269745-69269764 None:intergenic 10.0%
!! AAAGATTGTTTAAAAAAAAA+AGG - chr4_3:69269746-69269765 None:intergenic 10.0%
!!! AAAAAATAATTTTTATGATG+AGG - chr4_3:69265883-69265902 None:intergenic 10.0%
!! ATAATAATAATAACAATTCA+GGG - chr4_3:69267751-69267770 None:intergenic 10.0%
!! AATAATAATAATAACAATTC+AGG - chr4_3:69267752-69267771 None:intergenic 10.0%
!!! GATTTTTAAATATTATTTTC+TGG + chr4_3:69268232-69268251 Msa0659030:intron 10.0%
!!! TATAATTACTTTACTTATTT+TGG + chr4_3:69268623-69268642 Msa0659030:intron 10.0%
!! AATAAAAAAAAAAAAAAAGC+AGG - chr4_3:69268914-69268933 None:intergenic 10.0%
!! AAGATTGTTTAAAAAAAAAA+GGG - chr4_3:69269745-69269764 None:intergenic 10.0%
!! AAAGATTGTTTAAAAAAAAA+AGG - chr4_3:69269746-69269765 None:intergenic 10.0%
!! AAAAAGAATAGAAATGAAAT+CGG - chr4_3:69265606-69265625 None:intergenic 15.0%
!! TTTATTAAATTAACTGTGTT+GGG + chr4_3:69265978-69265997 Msa0659030:intron 15.0%
!!! TGTTTCAAATCAAATATTTT+AGG + chr4_3:69267254-69267273 Msa0659030:intron 15.0%
!! GATAAATAATTAAACACTAT+AGG - chr4_3:69268575-69268594 None:intergenic 15.0%
!! AGGAAAAATAAATCATATAA+TGG - chr4_3:69269147-69269166 None:intergenic 15.0%
!! ACATTATAAAATATTGCATT+TGG + chr4_3:69269271-69269290 Msa0659030:three_prime_UTR 15.0%
!!! TATTTAAAATACTCAAATGA+CGG - chr4_3:69269527-69269546 None:intergenic 15.0%
!! AGATTGTTTAAAAAAAAAAG+GGG - chr4_3:69269744-69269763 None:intergenic 15.0%
!! AAAAAGAATAGAAATGAAAT+CGG - chr4_3:69265606-69265625 None:intergenic 15.0%
!! TTTATTAAATTAACTGTGTT+GGG + chr4_3:69265978-69265997 Msa0659030:intron 15.0%
!!! TGTTTCAAATCAAATATTTT+AGG + chr4_3:69267254-69267273 Msa0659030:intron 15.0%
!! GATAAATAATTAAACACTAT+AGG - chr4_3:69268575-69268594 None:intergenic 15.0%
!! AGGAAAAATAAATCATATAA+TGG - chr4_3:69269147-69269166 None:intergenic 15.0%
!! ACATTATAAAATATTGCATT+TGG + chr4_3:69269271-69269290 Msa0659030:three_prime_UTR 15.0%
!!! TATTTAAAATACTCAAATGA+CGG - chr4_3:69269527-69269546 None:intergenic 15.0%
!! AGATTGTTTAAAAAAAAAAG+GGG - chr4_3:69269744-69269763 None:intergenic 15.0%
!!! ATATTTTTTGTTTCGAATAG+TGG - chr4_3:69265711-69265730 None:intergenic 20.0%
!!! AAATTAACTGATTTTTCCAT+TGG + chr4_3:69265736-69265755 Msa0659030:intron 20.0%
!! AATAACCTAATTAGACAAAA+GGG - chr4_3:69265794-69265813 None:intergenic 20.0%
!! TAATAACCTAATTAGACAAA+AGG - chr4_3:69265795-69265814 None:intergenic 20.0%
!!! GAAACTGAATATAATTTTAC+TGG + chr4_3:69265938-69265957 Msa0659030:intron 20.0%
!! GTTTATTAAATTAACTGTGT+TGG + chr4_3:69265977-69265996 Msa0659030:intron 20.0%
!!! TTATATTATATGAGTATCGT+AGG + chr4_3:69266206-69266225 Msa0659030:intron 20.0%
!!! TATATTATATGAGTATCGTA+GGG + chr4_3:69266207-69266226 Msa0659030:intron 20.0%
!! ATTTCTATTGAAAATCAAAG+TGG - chr4_3:69266342-69266361 None:intergenic 20.0%
!! ATATATACAAATGAGAGAAA+AGG + chr4_3:69267872-69267891 Msa0659030:intron 20.0%
!! TATATACAAATGAGAGAAAA+GGG + chr4_3:69267873-69267892 Msa0659030:intron 20.0%
!! TTTCTTATCATTTCTCAATA+GGG - chr4_3:69268064-69268083 None:intergenic 20.0%
!! ATTTAAATGTTTACTTTGCT+AGG + chr4_3:69268543-69268562 Msa0659030:intron 20.0%
!! TTTAAATGTTTACTTTGCTA+GGG + chr4_3:69268544-69268563 Msa0659030:intron 20.0%
!! AAAATATTGCATTTGGATAA+TGG + chr4_3:69269278-69269297 Msa0659030:three_prime_UTR 20.0%
!! TCACATTAATAAGAATAATC+CGG - chr4_3:69269455-69269474 None:intergenic 20.0%
!! GATTATTCTTATTAATGTGA+TGG + chr4_3:69269455-69269474 Msa0659030:three_prime_UTR 20.0%
!! ATACTGTATCTAAATAAACA+TGG - chr4_3:69269664-69269683 None:intergenic 20.0%
!!! ATATTTTTTGTTTCGAATAG+TGG - chr4_3:69265711-69265730 None:intergenic 20.0%
!!! AAATTAACTGATTTTTCCAT+TGG + chr4_3:69265736-69265755 Msa0659030:intron 20.0%
!! AATAACCTAATTAGACAAAA+GGG - chr4_3:69265794-69265813 None:intergenic 20.0%
!! TAATAACCTAATTAGACAAA+AGG - chr4_3:69265795-69265814 None:intergenic 20.0%
!!! GAAACTGAATATAATTTTAC+TGG + chr4_3:69265938-69265957 Msa0659030:intron 20.0%
!! GTTTATTAAATTAACTGTGT+TGG + chr4_3:69265977-69265996 Msa0659030:intron 20.0%
!!! TTATATTATATGAGTATCGT+AGG + chr4_3:69266206-69266225 Msa0659030:intron 20.0%
!!! TATATTATATGAGTATCGTA+GGG + chr4_3:69266207-69266226 Msa0659030:intron 20.0%
!! ATTTCTATTGAAAATCAAAG+TGG - chr4_3:69266342-69266361 None:intergenic 20.0%
!! ATATATACAAATGAGAGAAA+AGG + chr4_3:69267872-69267891 Msa0659030:intron 20.0%
!! TATATACAAATGAGAGAAAA+GGG + chr4_3:69267873-69267892 Msa0659030:intron 20.0%
!! TTTCTTATCATTTCTCAATA+GGG - chr4_3:69268064-69268083 None:intergenic 20.0%
!! ATTTAAATGTTTACTTTGCT+AGG + chr4_3:69268543-69268562 Msa0659030:intron 20.0%
!! TTTAAATGTTTACTTTGCTA+GGG + chr4_3:69268544-69268563 Msa0659030:intron 20.0%
!! AAAATATTGCATTTGGATAA+TGG + chr4_3:69269278-69269297 Msa0659030:three_prime_UTR 20.0%
!! TCACATTAATAAGAATAATC+CGG - chr4_3:69269455-69269474 None:intergenic 20.0%
!! GATTATTCTTATTAATGTGA+TGG + chr4_3:69269455-69269474 Msa0659030:three_prime_UTR 20.0%
!! ATACTGTATCTAAATAAACA+TGG - chr4_3:69269664-69269683 None:intergenic 20.0%
!! TTATTCCCTTTTGTCTAATT+AGG + chr4_3:69265786-69265805 Msa0659030:intron 25.0%
! ATTATTTACTAGTTGCATTG+CGG + chr4_3:69265910-69265929 Msa0659030:intron 25.0%
! CAACAACAAAAAAAATCAGT+AGG - chr4_3:69266016-69266035 None:intergenic 25.0%
! TATACCAAGAGTAGAAAATT+GGG - chr4_3:69266050-69266069 None:intergenic 25.0%
! AAATACAAGTCCAAAGTAAA+GGG - chr4_3:69266185-69266204 None:intergenic 25.0%
! AAAATACAAGTCCAAAGTAA+AGG - chr4_3:69266186-69266205 None:intergenic 25.0%
! TGATTTATGCAAAGAAGAAA+AGG + chr4_3:69266311-69266330 Msa0659030:intron 25.0%
! GATGCTGAAAAACATTTATT+TGG + chr4_3:69266425-69266444 Msa0659030:CDS 25.0%
! TGATAAAAACAACAAGGTAA+AGG - chr4_3:69266582-69266601 None:intergenic 25.0%
! AGACTATGATAAAAACAACA+AGG - chr4_3:69266588-69266607 None:intergenic 25.0%
! AAAGATTACGAGATATAAGT+TGG - chr4_3:69266627-69266646 None:intergenic 25.0%
! AAAATAGAACATCACATACT+TGG - chr4_3:69266827-69266846 None:intergenic 25.0%
!!! ATTTTTCTACTTATCGATTG+AGG + chr4_3:69267102-69267121 Msa0659030:intron 25.0%
!!! TTTTTCTACTTATCGATTGA+GGG + chr4_3:69267103-69267122 Msa0659030:intron 25.0%
!!! AATTTCAGTATTTTTGACGA+AGG - chr4_3:69267225-69267244 None:intergenic 25.0%
!!! TCTTCTTTTTTCTGTTTCAT+CGG - chr4_3:69267375-69267394 None:intergenic 25.0%
! GAAAAAAGAAGAGAGAATAT+AGG + chr4_3:69267383-69267402 Msa0659030:intron 25.0%
! TATCATTTCAATCGAGATTT+AGG + chr4_3:69267535-69267554 Msa0659030:intron 25.0%
! AATCGAGATTTAGGAAATAT+GGG + chr4_3:69267544-69267563 Msa0659030:intron 25.0%
! TTCTTATCATTTCTCAATAG+GGG - chr4_3:69268063-69268082 None:intergenic 25.0%
! CTTTCTTATCATTTCTCAAT+AGG - chr4_3:69268065-69268084 None:intergenic 25.0%
! CTATTGAGAAATGATAAGAA+AGG + chr4_3:69268063-69268082 Msa0659030:CDS 25.0%
! TATGTTGTCATGCAATTTAA+CGG + chr4_3:69268188-69268207 Msa0659030:intron 25.0%
!! TTTCCAAATATTGCATTTTG+TGG + chr4_3:69268412-69268431 Msa0659030:intron 25.0%
! AACTAAATTGAATCCACAAA+AGG - chr4_3:69268496-69268515 None:intergenic 25.0%
!! TATTTTGCCTCCTAATAAAA+GGG - chr4_3:69268831-69268850 None:intergenic 25.0%
!!! TTATTTTGCCTCCTAATAAA+AGG - chr4_3:69268832-69268851 None:intergenic 25.0%
! TGGAATATATGAATTTCACA+TGG + chr4_3:69269035-69269054 Msa0659030:intron 25.0%
!! ATACGTTGAAGACATTTTAA+AGG - chr4_3:69269245-69269264 None:intergenic 25.0%
! CACATTAATAAGAATAATCC+GGG - chr4_3:69269454-69269473 None:intergenic 25.0%
! TTACACTTTGATTCATAACT+TGG + chr4_3:69269586-69269605 Msa0659030:three_prime_UTR 25.0%
! TACACTTTGATTCATAACTT+GGG + chr4_3:69269587-69269606 Msa0659030:three_prime_UTR 25.0%
!!! GTTTTCAATTTGCTTTCAAA+TGG - chr4_3:69269642-69269661 None:intergenic 25.0%
!! TTATTCCCTTTTGTCTAATT+AGG + chr4_3:69265786-69265805 Msa0659030:intron 25.0%
! ATTATTTACTAGTTGCATTG+CGG + chr4_3:69265910-69265929 Msa0659030:intron 25.0%
! CAACAACAAAAAAAATCAGT+AGG - chr4_3:69266016-69266035 None:intergenic 25.0%
! TATACCAAGAGTAGAAAATT+GGG - chr4_3:69266050-69266069 None:intergenic 25.0%
! AAATACAAGTCCAAAGTAAA+GGG - chr4_3:69266185-69266204 None:intergenic 25.0%
! AAAATACAAGTCCAAAGTAA+AGG - chr4_3:69266186-69266205 None:intergenic 25.0%
! TGATTTATGCAAAGAAGAAA+AGG + chr4_3:69266311-69266330 Msa0659030:intron 25.0%
! GATGCTGAAAAACATTTATT+TGG + chr4_3:69266425-69266444 Msa0659030:CDS 25.0%
! TGATAAAAACAACAAGGTAA+AGG - chr4_3:69266582-69266601 None:intergenic 25.0%
! AGACTATGATAAAAACAACA+AGG - chr4_3:69266588-69266607 None:intergenic 25.0%
! AAAGATTACGAGATATAAGT+TGG - chr4_3:69266627-69266646 None:intergenic 25.0%
! AAAATAGAACATCACATACT+TGG - chr4_3:69266827-69266846 None:intergenic 25.0%
!!! ATTTTTCTACTTATCGATTG+AGG + chr4_3:69267102-69267121 Msa0659030:intron 25.0%
!!! TTTTTCTACTTATCGATTGA+GGG + chr4_3:69267103-69267122 Msa0659030:intron 25.0%
!!! AATTTCAGTATTTTTGACGA+AGG - chr4_3:69267225-69267244 None:intergenic 25.0%
!!! TCTTCTTTTTTCTGTTTCAT+CGG - chr4_3:69267375-69267394 None:intergenic 25.0%
! GAAAAAAGAAGAGAGAATAT+AGG + chr4_3:69267383-69267402 Msa0659030:intron 25.0%
! TATCATTTCAATCGAGATTT+AGG + chr4_3:69267535-69267554 Msa0659030:intron 25.0%
! AATCGAGATTTAGGAAATAT+GGG + chr4_3:69267544-69267563 Msa0659030:intron 25.0%
! TTCTTATCATTTCTCAATAG+GGG - chr4_3:69268063-69268082 None:intergenic 25.0%
! CTTTCTTATCATTTCTCAAT+AGG - chr4_3:69268065-69268084 None:intergenic 25.0%
! CTATTGAGAAATGATAAGAA+AGG + chr4_3:69268063-69268082 Msa0659030:CDS 25.0%
! TATGTTGTCATGCAATTTAA+CGG + chr4_3:69268188-69268207 Msa0659030:intron 25.0%
!! TTTCCAAATATTGCATTTTG+TGG + chr4_3:69268412-69268431 Msa0659030:intron 25.0%
! AACTAAATTGAATCCACAAA+AGG - chr4_3:69268496-69268515 None:intergenic 25.0%
!! TATTTTGCCTCCTAATAAAA+GGG - chr4_3:69268831-69268850 None:intergenic 25.0%
!!! TTATTTTGCCTCCTAATAAA+AGG - chr4_3:69268832-69268851 None:intergenic 25.0%
! TGGAATATATGAATTTCACA+TGG + chr4_3:69269035-69269054 Msa0659030:intron 25.0%
!! ATACGTTGAAGACATTTTAA+AGG - chr4_3:69269245-69269264 None:intergenic 25.0%
! CACATTAATAAGAATAATCC+GGG - chr4_3:69269454-69269473 None:intergenic 25.0%
! TTACACTTTGATTCATAACT+TGG + chr4_3:69269586-69269605 Msa0659030:three_prime_UTR 25.0%
! TACACTTTGATTCATAACTT+GGG + chr4_3:69269587-69269606 Msa0659030:three_prime_UTR 25.0%
!!! GTTTTCAATTTGCTTTCAAA+TGG - chr4_3:69269642-69269661 None:intergenic 25.0%
TAAGGTAAAAGCTATTGATG+AGG + chr4_3:69265384-69265403 Msa0659030:five_prime_UTR 30.0%
AAAAGCTATTGATGAGGAAT+AGG + chr4_3:69265390-69265409 Msa0659030:five_prime_UTR 30.0%
AAAGCTATTGATGAGGAATA+GGG + chr4_3:69265391-69265410 Msa0659030:five_prime_UTR 30.0%
AAATGAGGAACAAACCAATT+TGG - chr4_3:69265564-69265583 None:intergenic 30.0%
GAGAATGAATAGAAGAAATG+AGG - chr4_3:69265579-69265598 None:intergenic 30.0%
ATGCCAGAAACTCTAATATT+GGG + chr4_3:69265648-69265667 Msa0659030:intron 30.0%
TCATCAATTATCATTAGCCA+TGG + chr4_3:69265857-69265876 Msa0659030:intron 30.0%
! TAATTTTTATGATGAGGCCA+TGG - chr4_3:69265877-69265896 None:intergenic 30.0%
CAACAAAAAAAATCAGTAGG+TGG - chr4_3:69266013-69266032 None:intergenic 30.0%
CTATACCAAGAGTAGAAAAT+TGG - chr4_3:69266051-69266070 None:intergenic 30.0%
AATACAAGTCCAAAGTAAAG+GGG - chr4_3:69266184-69266203 None:intergenic 30.0%
!! ATTTTGTTGTGCATTCTTCA+GGG + chr4_3:69266696-69266715 Msa0659030:intron 30.0%
! AACTTATCTTTTGACCTTGA+AGG + chr4_3:69266792-69266811 Msa0659030:CDS 30.0%
GCACATCATCTAGTTAAAAA+TGG - chr4_3:69266855-69266874 None:intergenic 30.0%
!! TTTGATTTGAAACACACTAC+TGG - chr4_3:69267248-69267267 None:intergenic 30.0%
AATCAGTACCATAAGAAAGA+AGG + chr4_3:69267346-69267365 Msa0659030:intron 30.0%
GAGAATATAGGATAAGCTTA+AGG + chr4_3:69267395-69267414 Msa0659030:intron 30.0%
TCTCGATTGAAATGATATCA+TGG - chr4_3:69267532-69267551 None:intergenic 30.0%
CAATCGAGATTTAGGAAATA+TGG + chr4_3:69267543-69267562 Msa0659030:intron 30.0%
ATCGAGATTTAGGAAATATG+GGG + chr4_3:69267545-69267564 Msa0659030:intron 30.0%
AGAACCACATGTTTAAAAGA+AGG - chr4_3:69267684-69267703 None:intergenic 30.0%
!! TCAGGGTATTCATAATTTTG+AGG - chr4_3:69267734-69267753 None:intergenic 30.0%
TTTGAAAAGGACAACTAATC+GGG - chr4_3:69267828-69267847 None:intergenic 30.0%
GTTTGAAAAGGACAACTAAT+CGG - chr4_3:69267829-69267848 None:intergenic 30.0%
TCACATTTGCTCATATATCT+GGG + chr4_3:69267943-69267962 Msa0659030:intron 30.0%
TGCATTGGAGAAAATTGAAA+AGG + chr4_3:69268026-69268045 Msa0659030:CDS 30.0%
GAGAAATGATAAGAAAGGAA+TGG + chr4_3:69268068-69268087 Msa0659030:CDS 30.0%
AGCTTGAAAAGATACAACAT+AGG - chr4_3:69268144-69268163 None:intergenic 30.0%
ATGTTGTCATGCAATTTAAC+GGG + chr4_3:69268189-69268208 Msa0659030:intron 30.0%
! GATCATTTTACAACAGAATG+AGG - chr4_3:69268277-69268296 None:intergenic 30.0%
! TCGAGTCTTGTAATTTATGA+AGG + chr4_3:69268365-69268384 Msa0659030:intron 30.0%
!!! TTGAATGCTAGCTTTTGTTT+CGG + chr4_3:69268518-69268537 Msa0659030:intron 30.0%
ATTTGAGCAGAATGAATTAC+TGG + chr4_3:69268598-69268617 Msa0659030:intron 30.0%
TTTGAGCAGAATGAATTACT+GGG + chr4_3:69268599-69268618 Msa0659030:intron 30.0%
CAATGGAAACTCAAAAGAAA+AGG + chr4_3:69268791-69268810 Msa0659030:CDS 30.0%
CAGAAGTTAGAACTTAGAAA+TGG - chr4_3:69268867-69268886 None:intergenic 30.0%
AAAAAAAAGCAGGAGAATCA+GGG - chr4_3:69268904-69268923 None:intergenic 30.0%
AAAAAAAAAGCAGGAGAATC+AGG - chr4_3:69268905-69268924 None:intergenic 30.0%
CTATCTTCAAAGTTAGAATC+AGG - chr4_3:69268984-69269003 None:intergenic 30.0%
AGTAGTATAAAATGTCCCTA+TGG + chr4_3:69269002-69269021 Msa0659030:intron 30.0%
TTCCAAATTCAAAAGCCATA+GGG - chr4_3:69269020-69269039 None:intergenic 30.0%
ATTCCAAATTCAAAAGCCAT+AGG - chr4_3:69269021-69269040 None:intergenic 30.0%
CCTATTTCCAACAAATCAAT+TGG - chr4_3:69269062-69269081 None:intergenic 30.0%
!! CCAATTGATTTGTTGGAAAT+AGG + chr4_3:69269059-69269078 Msa0659030:intron 30.0%
!! AGACATTTTAAAGGAAGTTC+CGG - chr4_3:69269236-69269255 None:intergenic 30.0%
GTCTACTTATTGAAGAAACA+TGG - chr4_3:69269309-69269328 None:intergenic 30.0%
AAACTCAAGAATCTTCAAAC+TGG - chr4_3:69269342-69269361 None:intergenic 30.0%
!!! TTTTGTCAAGTTGTTTTTCC+CGG + chr4_3:69269433-69269452 Msa0659030:three_prime_UTR 30.0%
AGATGGATGCAATCAAAATT+GGG - chr4_3:69269486-69269505 None:intergenic 30.0%
TAGATGGATGCAATCAAAAT+TGG - chr4_3:69269487-69269506 None:intergenic 30.0%
ATCCATCTATTCTTCGATAT+AGG + chr4_3:69269498-69269517 Msa0659030:three_prime_UTR 30.0%
AATTCACAAAAGAGAAGACT+GGG + chr4_3:69269559-69269578 Msa0659030:three_prime_UTR 30.0%
ACACTTTGATTCATAACTTG+GGG + chr4_3:69269588-69269607 Msa0659030:three_prime_UTR 30.0%
AATGGAAGTAATCATCATGT+TGG - chr4_3:69269624-69269643 None:intergenic 30.0%
! ATCCCTCTAAAAATATTGCA+GGG + chr4_3:69269710-69269729 Msa0659030:three_prime_UTR 30.0%
!!! TTCCCTGCAATATTTTTAGA+GGG - chr4_3:69269715-69269734 None:intergenic 30.0%
!!! ATTCCCTGCAATATTTTTAG+AGG - chr4_3:69269716-69269735 None:intergenic 30.0%
TAAGGTAAAAGCTATTGATG+AGG + chr4_3:69265384-69265403 Msa0659030:five_prime_UTR 30.0%
AAAAGCTATTGATGAGGAAT+AGG + chr4_3:69265390-69265409 Msa0659030:five_prime_UTR 30.0%
AAAGCTATTGATGAGGAATA+GGG + chr4_3:69265391-69265410 Msa0659030:five_prime_UTR 30.0%
AAATGAGGAACAAACCAATT+TGG - chr4_3:69265564-69265583 None:intergenic 30.0%
GAGAATGAATAGAAGAAATG+AGG - chr4_3:69265579-69265598 None:intergenic 30.0%
ATGCCAGAAACTCTAATATT+GGG + chr4_3:69265648-69265667 Msa0659030:intron 30.0%
TCATCAATTATCATTAGCCA+TGG + chr4_3:69265857-69265876 Msa0659030:intron 30.0%
! TAATTTTTATGATGAGGCCA+TGG - chr4_3:69265877-69265896 None:intergenic 30.0%
CAACAAAAAAAATCAGTAGG+TGG - chr4_3:69266013-69266032 None:intergenic 30.0%
CTATACCAAGAGTAGAAAAT+TGG - chr4_3:69266051-69266070 None:intergenic 30.0%
AATACAAGTCCAAAGTAAAG+GGG - chr4_3:69266184-69266203 None:intergenic 30.0%
!! ATTTTGTTGTGCATTCTTCA+GGG + chr4_3:69266696-69266715 Msa0659030:intron 30.0%
! AACTTATCTTTTGACCTTGA+AGG + chr4_3:69266792-69266811 Msa0659030:CDS 30.0%
GCACATCATCTAGTTAAAAA+TGG - chr4_3:69266855-69266874 None:intergenic 30.0%
!! TTTGATTTGAAACACACTAC+TGG - chr4_3:69267248-69267267 None:intergenic 30.0%
AATCAGTACCATAAGAAAGA+AGG + chr4_3:69267346-69267365 Msa0659030:intron 30.0%
GAGAATATAGGATAAGCTTA+AGG + chr4_3:69267395-69267414 Msa0659030:intron 30.0%
TCTCGATTGAAATGATATCA+TGG - chr4_3:69267532-69267551 None:intergenic 30.0%
CAATCGAGATTTAGGAAATA+TGG + chr4_3:69267543-69267562 Msa0659030:intron 30.0%
ATCGAGATTTAGGAAATATG+GGG + chr4_3:69267545-69267564 Msa0659030:intron 30.0%
AGAACCACATGTTTAAAAGA+AGG - chr4_3:69267684-69267703 None:intergenic 30.0%
!! TCAGGGTATTCATAATTTTG+AGG - chr4_3:69267734-69267753 None:intergenic 30.0%
TTTGAAAAGGACAACTAATC+GGG - chr4_3:69267828-69267847 None:intergenic 30.0%
GTTTGAAAAGGACAACTAAT+CGG - chr4_3:69267829-69267848 None:intergenic 30.0%
TCACATTTGCTCATATATCT+GGG + chr4_3:69267943-69267962 Msa0659030:intron 30.0%
TGCATTGGAGAAAATTGAAA+AGG + chr4_3:69268026-69268045 Msa0659030:CDS 30.0%
GAGAAATGATAAGAAAGGAA+TGG + chr4_3:69268068-69268087 Msa0659030:CDS 30.0%
AGCTTGAAAAGATACAACAT+AGG - chr4_3:69268144-69268163 None:intergenic 30.0%
ATGTTGTCATGCAATTTAAC+GGG + chr4_3:69268189-69268208 Msa0659030:intron 30.0%
! GATCATTTTACAACAGAATG+AGG - chr4_3:69268277-69268296 None:intergenic 30.0%
! TCGAGTCTTGTAATTTATGA+AGG + chr4_3:69268365-69268384 Msa0659030:intron 30.0%
!!! TTGAATGCTAGCTTTTGTTT+CGG + chr4_3:69268518-69268537 Msa0659030:intron 30.0%
ATTTGAGCAGAATGAATTAC+TGG + chr4_3:69268598-69268617 Msa0659030:intron 30.0%
TTTGAGCAGAATGAATTACT+GGG + chr4_3:69268599-69268618 Msa0659030:intron 30.0%
CAATGGAAACTCAAAAGAAA+AGG + chr4_3:69268791-69268810 Msa0659030:CDS 30.0%
CAGAAGTTAGAACTTAGAAA+TGG - chr4_3:69268867-69268886 None:intergenic 30.0%
AAAAAAAAGCAGGAGAATCA+GGG - chr4_3:69268904-69268923 None:intergenic 30.0%
AAAAAAAAAGCAGGAGAATC+AGG - chr4_3:69268905-69268924 None:intergenic 30.0%
CTATCTTCAAAGTTAGAATC+AGG - chr4_3:69268984-69269003 None:intergenic 30.0%
AGTAGTATAAAATGTCCCTA+TGG + chr4_3:69269002-69269021 Msa0659030:intron 30.0%
TTCCAAATTCAAAAGCCATA+GGG - chr4_3:69269020-69269039 None:intergenic 30.0%
ATTCCAAATTCAAAAGCCAT+AGG - chr4_3:69269021-69269040 None:intergenic 30.0%
CCTATTTCCAACAAATCAAT+TGG - chr4_3:69269062-69269081 None:intergenic 30.0%
!! CCAATTGATTTGTTGGAAAT+AGG + chr4_3:69269059-69269078 Msa0659030:intron 30.0%
!! AGACATTTTAAAGGAAGTTC+CGG - chr4_3:69269236-69269255 None:intergenic 30.0%
GTCTACTTATTGAAGAAACA+TGG - chr4_3:69269309-69269328 None:intergenic 30.0%
AAACTCAAGAATCTTCAAAC+TGG - chr4_3:69269342-69269361 None:intergenic 30.0%
!!! TTTTGTCAAGTTGTTTTTCC+CGG + chr4_3:69269433-69269452 Msa0659030:three_prime_UTR 30.0%
AGATGGATGCAATCAAAATT+GGG - chr4_3:69269486-69269505 None:intergenic 30.0%
TAGATGGATGCAATCAAAAT+TGG - chr4_3:69269487-69269506 None:intergenic 30.0%
ATCCATCTATTCTTCGATAT+AGG + chr4_3:69269498-69269517 Msa0659030:three_prime_UTR 30.0%
AATTCACAAAAGAGAAGACT+GGG + chr4_3:69269559-69269578 Msa0659030:three_prime_UTR 30.0%
ACACTTTGATTCATAACTTG+GGG + chr4_3:69269588-69269607 Msa0659030:three_prime_UTR 30.0%
AATGGAAGTAATCATCATGT+TGG - chr4_3:69269624-69269643 None:intergenic 30.0%
! ATCCCTCTAAAAATATTGCA+GGG + chr4_3:69269710-69269729 Msa0659030:three_prime_UTR 30.0%
!!! TTCCCTGCAATATTTTTAGA+GGG - chr4_3:69269715-69269734 None:intergenic 30.0%
!!! ATTCCCTGCAATATTTTTAG+AGG - chr4_3:69269716-69269735 None:intergenic 30.0%
AGGGAGTAGAATATATCGAA+CGG + chr4_3:69265355-69265374 Msa0659030:five_prime_UTR 35.0%
TCTATTCAATGGTGAAGTGA+AGG - chr4_3:69265421-69265440 None:intergenic 35.0%
TCTTCTCTCTCTCTATTCAA+TGG - chr4_3:69265432-69265451 None:intergenic 35.0%
GGAACAAACCAATTTGGATT+TGG - chr4_3:69265558-69265577 None:intergenic 35.0%
CTGGCATGAAAATCAGAAAT+TGG - chr4_3:69265635-69265654 None:intergenic 35.0%
CATGCCAGAAACTCTAATAT+TGG + chr4_3:69265647-69265666 Msa0659030:intron 35.0%
GATCCCAATATTAGAGTTTC+TGG - chr4_3:69265654-69265673 None:intergenic 35.0%
! CGAATAGTGGAATTGAGAAT+CGG - chr4_3:69265698-69265717 None:intergenic 35.0%
TCTTAACACTCGAAATCCAA+TGG - chr4_3:69265755-69265774 None:intergenic 35.0%
! AACAAATTTGAGACTGCCAT+CGG + chr4_3:69266456-69266475 Msa0659030:CDS 35.0%
AAGAATGCACAACAAAATGC+AGG - chr4_3:69266694-69266713 None:intergenic 35.0%
!! CATTTTGTTGTGCATTCTTC+AGG + chr4_3:69266695-69266714 Msa0659030:intron 35.0%
AAAAGATAAGTTCGAGCATC+AGG - chr4_3:69266784-69266803 None:intergenic 35.0%
! CTTGGTTCTTATTTCCTTCA+AGG - chr4_3:69266809-69266828 None:intergenic 35.0%
TACCTTTCTTCTCATTGTCA+AGG + chr4_3:69267021-69267040 Msa0659030:intron 35.0%
!! AGTATTTTTGACGAAGGTGT+GGG - chr4_3:69267219-69267238 None:intergenic 35.0%
!!! GGTACTGATTGTTTTGACTT+GGG - chr4_3:69267336-69267355 None:intergenic 35.0%
!!! TGGTACTGATTGTTTTGACT+TGG - chr4_3:69267337-69267356 None:intergenic 35.0%
ATCGGTTACCTTCTTTCTTA+TGG - chr4_3:69267357-69267376 None:intergenic 35.0%
AGATTTAGGAAATATGGGGA+AGG + chr4_3:69267549-69267568 Msa0659030:intron 35.0%
ACAGACACAACTACATTAAG+TGG - chr4_3:69267652-69267671 None:intergenic 35.0%
! AACGCCTTCTTTTAAACATG+TGG + chr4_3:69267677-69267696 Msa0659030:intron 35.0%
GTCACATTTGCTCATATATC+TGG + chr4_3:69267942-69267961 Msa0659030:intron 35.0%
! ATCTGGGTACATTTCTTTTC+AGG + chr4_3:69267959-69267978 Msa0659030:intron 35.0%
! GGCTTTAATGTTTGATGCAT+TGG + chr4_3:69268011-69268030 Msa0659030:CDS 35.0%
TATCAAACTCTGCCAAAAGA+AGG - chr4_3:69268095-69268114 None:intergenic 35.0%
CGGGATACTTTCTATATGTT+TGG + chr4_3:69268208-69268227 Msa0659030:intron 35.0%
CAGCCACAAAATGCAATATT+TGG - chr4_3:69268418-69268437 None:intergenic 35.0%
AAATGTTTACTTTGCTAGGG+AGG + chr4_3:69268547-69268566 Msa0659030:intron 35.0%
TCAAAGGGTGAAAAAACAAC+AGG - chr4_3:69268656-69268675 None:intergenic 35.0%
!!! GTTGTTTTTTCACCCTTTGA+TGG + chr4_3:69268656-69268675 Msa0659030:intron 35.0%
TTCGAATTCCAAGTCTAAGA+TGG - chr4_3:69268684-69268703 None:intergenic 35.0%
!! ACATGGACCAATTGATTTGT+TGG + chr4_3:69269052-69269071 Msa0659030:intron 35.0%
TGGAAATAGGACCATTGTTA+TGG + chr4_3:69269072-69269091 Msa0659030:intron 35.0%
AGTGTCTCTAACCATAACAA+TGG - chr4_3:69269086-69269105 None:intergenic 35.0%
! ATTGCATTTGGATAATGGTG+AGG + chr4_3:69269283-69269302 Msa0659030:three_prime_UTR 35.0%
! AATCTTCAAACTGGCTTCAT+TGG - chr4_3:69269333-69269352 None:intergenic 35.0%
!! TTCCAAATTCCTCTGAAATC+TGG + chr4_3:69269377-69269396 Msa0659030:three_prime_UTR 35.0%
TTCCAGATTTCAGAGGAATT+TGG - chr4_3:69269382-69269401 None:intergenic 35.0%
TGCCTATATCGAAGAATAGA+TGG - chr4_3:69269503-69269522 None:intergenic 35.0%
GAATTCACAAAAGAGAAGAC+TGG + chr4_3:69269558-69269577 Msa0659030:three_prime_UTR 35.0%
! GATCCCTCTAAAAATATTGC+AGG + chr4_3:69269709-69269728 Msa0659030:three_prime_UTR 35.0%
AGGGAGTAGAATATATCGAA+CGG + chr4_3:69265355-69265374 Msa0659030:five_prime_UTR 35.0%
TCTATTCAATGGTGAAGTGA+AGG - chr4_3:69265421-69265440 None:intergenic 35.0%
TCTTCTCTCTCTCTATTCAA+TGG - chr4_3:69265432-69265451 None:intergenic 35.0%
GGAACAAACCAATTTGGATT+TGG - chr4_3:69265558-69265577 None:intergenic 35.0%
CTGGCATGAAAATCAGAAAT+TGG - chr4_3:69265635-69265654 None:intergenic 35.0%
CATGCCAGAAACTCTAATAT+TGG + chr4_3:69265647-69265666 Msa0659030:intron 35.0%
GATCCCAATATTAGAGTTTC+TGG - chr4_3:69265654-69265673 None:intergenic 35.0%
! CGAATAGTGGAATTGAGAAT+CGG - chr4_3:69265698-69265717 None:intergenic 35.0%
TCTTAACACTCGAAATCCAA+TGG - chr4_3:69265755-69265774 None:intergenic 35.0%
! AACAAATTTGAGACTGCCAT+CGG + chr4_3:69266456-69266475 Msa0659030:CDS 35.0%
AAGAATGCACAACAAAATGC+AGG - chr4_3:69266694-69266713 None:intergenic 35.0%
!! CATTTTGTTGTGCATTCTTC+AGG + chr4_3:69266695-69266714 Msa0659030:intron 35.0%
AAAAGATAAGTTCGAGCATC+AGG - chr4_3:69266784-69266803 None:intergenic 35.0%
! CTTGGTTCTTATTTCCTTCA+AGG - chr4_3:69266809-69266828 None:intergenic 35.0%
TACCTTTCTTCTCATTGTCA+AGG + chr4_3:69267021-69267040 Msa0659030:intron 35.0%
!! AGTATTTTTGACGAAGGTGT+GGG - chr4_3:69267219-69267238 None:intergenic 35.0%
!!! GGTACTGATTGTTTTGACTT+GGG - chr4_3:69267336-69267355 None:intergenic 35.0%
!!! TGGTACTGATTGTTTTGACT+TGG - chr4_3:69267337-69267356 None:intergenic 35.0%
ATCGGTTACCTTCTTTCTTA+TGG - chr4_3:69267357-69267376 None:intergenic 35.0%
AGATTTAGGAAATATGGGGA+AGG + chr4_3:69267549-69267568 Msa0659030:intron 35.0%
ACAGACACAACTACATTAAG+TGG - chr4_3:69267652-69267671 None:intergenic 35.0%
! AACGCCTTCTTTTAAACATG+TGG + chr4_3:69267677-69267696 Msa0659030:intron 35.0%
GTCACATTTGCTCATATATC+TGG + chr4_3:69267942-69267961 Msa0659030:intron 35.0%
! ATCTGGGTACATTTCTTTTC+AGG + chr4_3:69267959-69267978 Msa0659030:intron 35.0%
! GGCTTTAATGTTTGATGCAT+TGG + chr4_3:69268011-69268030 Msa0659030:CDS 35.0%
TATCAAACTCTGCCAAAAGA+AGG - chr4_3:69268095-69268114 None:intergenic 35.0%
CGGGATACTTTCTATATGTT+TGG + chr4_3:69268208-69268227 Msa0659030:intron 35.0%
CAGCCACAAAATGCAATATT+TGG - chr4_3:69268418-69268437 None:intergenic 35.0%
AAATGTTTACTTTGCTAGGG+AGG + chr4_3:69268547-69268566 Msa0659030:intron 35.0%
TCAAAGGGTGAAAAAACAAC+AGG - chr4_3:69268656-69268675 None:intergenic 35.0%
!!! GTTGTTTTTTCACCCTTTGA+TGG + chr4_3:69268656-69268675 Msa0659030:intron 35.0%
TTCGAATTCCAAGTCTAAGA+TGG - chr4_3:69268684-69268703 None:intergenic 35.0%
!! ACATGGACCAATTGATTTGT+TGG + chr4_3:69269052-69269071 Msa0659030:intron 35.0%
TGGAAATAGGACCATTGTTA+TGG + chr4_3:69269072-69269091 Msa0659030:intron 35.0%
AGTGTCTCTAACCATAACAA+TGG - chr4_3:69269086-69269105 None:intergenic 35.0%
! ATTGCATTTGGATAATGGTG+AGG + chr4_3:69269283-69269302 Msa0659030:three_prime_UTR 35.0%
! AATCTTCAAACTGGCTTCAT+TGG - chr4_3:69269333-69269352 None:intergenic 35.0%
!! TTCCAAATTCCTCTGAAATC+TGG + chr4_3:69269377-69269396 Msa0659030:three_prime_UTR 35.0%
TTCCAGATTTCAGAGGAATT+TGG - chr4_3:69269382-69269401 None:intergenic 35.0%
TGCCTATATCGAAGAATAGA+TGG - chr4_3:69269503-69269522 None:intergenic 35.0%
GAATTCACAAAAGAGAAGAC+TGG + chr4_3:69269558-69269577 Msa0659030:three_prime_UTR 35.0%
! GATCCCTCTAAAAATATTGC+AGG + chr4_3:69269709-69269728 Msa0659030:three_prime_UTR 35.0%
GGGAGTAGAATATATCGAAC+GGG + chr4_3:69265356-69265375 Msa0659030:five_prime_UTR 40.0%
TATATCGAACGGGTGAGATA+AGG + chr4_3:69265366-69265385 Msa0659030:five_prime_UTR 40.0%
TTTCTCTGTAACGCGAGTTA+GGG - chr4_3:69265490-69265509 None:intergenic 40.0%
CTCATCATCATCATCAACCA+TGG + chr4_3:69265511-69265530 Msa0659030:exon 40.0%
! TGTGCCCAATTTTCTACTCT+TGG + chr4_3:69266043-69266062 Msa0659030:intron 40.0%
CTACTCTTGGTATAGCTGTA+TGG + chr4_3:69266056-69266075 Msa0659030:intron 40.0%
! TTTGTGTCTGAGACAGTGAT+AGG + chr4_3:69266232-69266251 Msa0659030:intron 40.0%
AGACTGCCATCGGAATATTA+AGG + chr4_3:69266466-69266485 Msa0659030:CDS 40.0%
TGCCATCGGAATATTAAGGA+AGG + chr4_3:69266470-69266489 Msa0659030:CDS 40.0%
CTCCTTCCTTAATATTCCGA+TGG - chr4_3:69266475-69266494 None:intergenic 40.0%
!! TGCTGTTTCTCAATATGCGA+AGG + chr4_3:69266524-69266543 Msa0659030:CDS 40.0%
CACCTTGACAATGAGAAGAA+AGG - chr4_3:69267026-69267045 None:intergenic 40.0%
! TGTCAAGGTGCTTTCTCTTA+AGG + chr4_3:69267036-69267055 Msa0659030:intron 40.0%
TCTTAAGGTGGTGTCTAACA+TGG + chr4_3:69267051-69267070 Msa0659030:intron 40.0%
TGGTGTCTAACATGGACAAT+CGG + chr4_3:69267059-69267078 Msa0659030:intron 40.0%
!! GGAGAAAACTATGGTGTTGT+GGG - chr4_3:69267151-69267170 None:intergenic 40.0%
CAGATACAGAGTGATTAGGA+GGG - chr4_3:69267178-69267197 None:intergenic 40.0%
ACAGATACAGAGTGATTAGG+AGG - chr4_3:69267179-69267198 None:intergenic 40.0%
!! TATTTTTGACGAAGGTGTGG+GGG - chr4_3:69267217-69267236 None:intergenic 40.0%
!! GTATTTTTGACGAAGGTGTG+GGG - chr4_3:69267218-69267237 None:intergenic 40.0%
!! CAGTATTTTTGACGAAGGTG+TGG - chr4_3:69267220-69267239 None:intergenic 40.0%
CATCTCCAGTGTTAAATCTC+CGG + chr4_3:69267478-69267497 Msa0659030:intron 40.0%
ATATGGGGAAGGATTTAGCA+TGG + chr4_3:69267560-69267579 Msa0659030:intron 40.0%
GAACACCATAGAATCTAGTG+AGG + chr4_3:69267586-69267605 Msa0659030:intron 40.0%
TGAAGCCTCACTAGATTCTA+TGG - chr4_3:69267594-69267613 None:intergenic 40.0%
GCACGCACATAAGTTTGAAA+AGG - chr4_3:69267841-69267860 None:intergenic 40.0%
!! GGTACATTTCTTTTCAGGAG+AGG + chr4_3:69267964-69267983 Msa0659030:intron 40.0%
AGAGGTCTTACAGATGATCT+TGG + chr4_3:69267982-69268001 Msa0659030:CDS 40.0%
! GAAAGGAATGGACCTTCTTT+TGG + chr4_3:69268080-69268099 Msa0659030:CDS 40.0%
TATAGTCTATCCTCTATGCG+TGG + chr4_3:69268456-69268475 Msa0659030:intron 40.0%
! GTGGTCAATTGTTCCTTTTG+TGG + chr4_3:69268480-69268499 Msa0659030:intron 40.0%
AAGGGTGAAAAAACAACAGG+AGG - chr4_3:69268653-69268672 None:intergenic 40.0%
! TCTAAGATGGCACCATCAAA+GGG - chr4_3:69268671-69268690 None:intergenic 40.0%
GTTGAAAAAGGATGCTGTTG+AGG + chr4_3:69268768-69268787 Msa0659030:CDS 40.0%
TTTGCCTCCTAATAAAAGGG+TGG - chr4_3:69268828-69268847 None:intergenic 40.0%
AAACACCTTTGTTAAGCGCA+TGG + chr4_3:69268939-69268958 Msa0659030:intron 40.0%
AAGTACCATGCGCTTAACAA+AGG - chr4_3:69268947-69268966 None:intergenic 40.0%
! GTCCCTATGGCTTTTGAATT+TGG + chr4_3:69269015-69269034 Msa0659030:intron 40.0%
!! TTTTCCTTGTCTGCCATTTC+AGG + chr4_3:69269160-69269179 Msa0659030:intron 40.0%
! TTTCCTTGTCTGCCATTTCA+GGG + chr4_3:69269161-69269180 Msa0659030:intron 40.0%
ACGTCAAAACTTTGGACATC+CGG + chr4_3:69269214-69269233 Msa0659030:CDS 40.0%
CTTCAACTTCCAGATTTCAG+AGG - chr4_3:69269389-69269408 None:intergenic 40.0%
GGGAGTAGAATATATCGAAC+GGG + chr4_3:69265356-69265375 Msa0659030:five_prime_UTR 40.0%
TATATCGAACGGGTGAGATA+AGG + chr4_3:69265366-69265385 Msa0659030:five_prime_UTR 40.0%
TTTCTCTGTAACGCGAGTTA+GGG - chr4_3:69265490-69265509 None:intergenic 40.0%
CTCATCATCATCATCAACCA+TGG + chr4_3:69265511-69265530 Msa0659030:exon 40.0%
! TGTGCCCAATTTTCTACTCT+TGG + chr4_3:69266043-69266062 Msa0659030:intron 40.0%
CTACTCTTGGTATAGCTGTA+TGG + chr4_3:69266056-69266075 Msa0659030:intron 40.0%
! TTTGTGTCTGAGACAGTGAT+AGG + chr4_3:69266232-69266251 Msa0659030:intron 40.0%
AGACTGCCATCGGAATATTA+AGG + chr4_3:69266466-69266485 Msa0659030:CDS 40.0%
TGCCATCGGAATATTAAGGA+AGG + chr4_3:69266470-69266489 Msa0659030:CDS 40.0%
CTCCTTCCTTAATATTCCGA+TGG - chr4_3:69266475-69266494 None:intergenic 40.0%
!! TGCTGTTTCTCAATATGCGA+AGG + chr4_3:69266524-69266543 Msa0659030:CDS 40.0%
CACCTTGACAATGAGAAGAA+AGG - chr4_3:69267026-69267045 None:intergenic 40.0%
! TGTCAAGGTGCTTTCTCTTA+AGG + chr4_3:69267036-69267055 Msa0659030:intron 40.0%
TCTTAAGGTGGTGTCTAACA+TGG + chr4_3:69267051-69267070 Msa0659030:intron 40.0%
TGGTGTCTAACATGGACAAT+CGG + chr4_3:69267059-69267078 Msa0659030:intron 40.0%
!! GGAGAAAACTATGGTGTTGT+GGG - chr4_3:69267151-69267170 None:intergenic 40.0%
CAGATACAGAGTGATTAGGA+GGG - chr4_3:69267178-69267197 None:intergenic 40.0%
ACAGATACAGAGTGATTAGG+AGG - chr4_3:69267179-69267198 None:intergenic 40.0%
!! TATTTTTGACGAAGGTGTGG+GGG - chr4_3:69267217-69267236 None:intergenic 40.0%
!! GTATTTTTGACGAAGGTGTG+GGG - chr4_3:69267218-69267237 None:intergenic 40.0%
!! CAGTATTTTTGACGAAGGTG+TGG - chr4_3:69267220-69267239 None:intergenic 40.0%
CATCTCCAGTGTTAAATCTC+CGG + chr4_3:69267478-69267497 Msa0659030:intron 40.0%
ATATGGGGAAGGATTTAGCA+TGG + chr4_3:69267560-69267579 Msa0659030:intron 40.0%
GAACACCATAGAATCTAGTG+AGG + chr4_3:69267586-69267605 Msa0659030:intron 40.0%
TGAAGCCTCACTAGATTCTA+TGG - chr4_3:69267594-69267613 None:intergenic 40.0%
GCACGCACATAAGTTTGAAA+AGG - chr4_3:69267841-69267860 None:intergenic 40.0%
!! GGTACATTTCTTTTCAGGAG+AGG + chr4_3:69267964-69267983 Msa0659030:intron 40.0%
AGAGGTCTTACAGATGATCT+TGG + chr4_3:69267982-69268001 Msa0659030:CDS 40.0%
! GAAAGGAATGGACCTTCTTT+TGG + chr4_3:69268080-69268099 Msa0659030:CDS 40.0%
TATAGTCTATCCTCTATGCG+TGG + chr4_3:69268456-69268475 Msa0659030:intron 40.0%
! GTGGTCAATTGTTCCTTTTG+TGG + chr4_3:69268480-69268499 Msa0659030:intron 40.0%
AAGGGTGAAAAAACAACAGG+AGG - chr4_3:69268653-69268672 None:intergenic 40.0%
! TCTAAGATGGCACCATCAAA+GGG - chr4_3:69268671-69268690 None:intergenic 40.0%
GTTGAAAAAGGATGCTGTTG+AGG + chr4_3:69268768-69268787 Msa0659030:CDS 40.0%
TTTGCCTCCTAATAAAAGGG+TGG - chr4_3:69268828-69268847 None:intergenic 40.0%
AAACACCTTTGTTAAGCGCA+TGG + chr4_3:69268939-69268958 Msa0659030:intron 40.0%
AAGTACCATGCGCTTAACAA+AGG - chr4_3:69268947-69268966 None:intergenic 40.0%
! GTCCCTATGGCTTTTGAATT+TGG + chr4_3:69269015-69269034 Msa0659030:intron 40.0%
!! TTTTCCTTGTCTGCCATTTC+AGG + chr4_3:69269160-69269179 Msa0659030:intron 40.0%
! TTTCCTTGTCTGCCATTTCA+GGG + chr4_3:69269161-69269180 Msa0659030:intron 40.0%
ACGTCAAAACTTTGGACATC+CGG + chr4_3:69269214-69269233 Msa0659030:CDS 40.0%
CTTCAACTTCCAGATTTCAG+AGG - chr4_3:69269389-69269408 None:intergenic 40.0%
CTTTCTCTGTAACGCGAGTT+AGG - chr4_3:69265491-69265510 None:intergenic 45.0%
CCAATTTGGATTTGGATGCG+AGG - chr4_3:69265550-69265569 None:intergenic 45.0%
CCTCGCATCCAAATCCAAAT+TGG + chr4_3:69265547-69265566 Msa0659030:CDS 45.0%
CTCTTGGTATAGCTGTATGG+CGG + chr4_3:69266059-69266078 Msa0659030:intron 45.0%
ACTTTGCTAAAGGGTCCGAA+GGG + chr4_3:69266123-69266142 Msa0659030:CDS 45.0%
TGAGACAGTGATAGGCATGT+TGG + chr4_3:69266240-69266259 Msa0659030:intron 45.0%
GCATATTGAGAAACAGCAGC+TGG - chr4_3:69266522-69266541 None:intergenic 45.0%
! CAAGGTGCTTTCTCTTAAGG+TGG + chr4_3:69267039-69267058 Msa0659030:intron 45.0%
ACATGGACAATCGGTCTTTG+TGG + chr4_3:69267068-69267087 Msa0659030:intron 45.0%
! GGGAGAAAACTATGGTGTTG+TGG - chr4_3:69267152-69267171 None:intergenic 45.0%
ACAGAGTGATTAGGAGGGAA+GGG - chr4_3:69267173-69267192 None:intergenic 45.0%
TACAGAGTGATTAGGAGGGA+AGG - chr4_3:69267174-69267193 None:intergenic 45.0%
GGGACAGATACAGAGTGATT+AGG - chr4_3:69267182-69267201 None:intergenic 45.0%
!!! CTGATTGTTTTGACTTGGGC+AGG - chr4_3:69267332-69267351 None:intergenic 45.0%
TACATTCATAACCCCAACGC+CGG + chr4_3:69267443-69267462 Msa0659030:intron 45.0%
TTTAACACTGGAGATGCTCC+AGG - chr4_3:69267474-69267493 None:intergenic 45.0%
TGGTCCTCAAGTTCTGTTGT+TGG - chr4_3:69267512-69267531 None:intergenic 45.0%
ATGCAGACATCTCTTGCAAC+AGG + chr4_3:69267902-69267921 Msa0659030:intron 45.0%
! CTTGCAACAGGTGTTACATC+AGG + chr4_3:69267914-69267933 Msa0659030:intron 45.0%
TACAGATGATCTTGGAGCAG+AGG + chr4_3:69267990-69268009 Msa0659030:CDS 45.0%
!! TTTTGTGGCTGCTGCTTGTT+TGG + chr4_3:69268427-69268446 Msa0659030:intron 45.0%
! TTTGTGGCTGCTGCTTGTTT+GGG + chr4_3:69268428-69268447 Msa0659030:intron 45.0%
! GTCTAAGATGGCACCATCAA+AGG - chr4_3:69268672-69268691 None:intergenic 45.0%
!! TGATGGTGCCATCTTAGACT+TGG + chr4_3:69268673-69268692 Msa0659030:intron 45.0%
TAAAATAGCCAAAGCGCAGC+TGG + chr4_3:69268741-69268760 Msa0659030:CDS 45.0%
AAAGGATGCTGTTGAGGCAA+TGG + chr4_3:69268774-69268793 Msa0659030:CDS 45.0%
CCTAATAAAAGGGTGGTGTG+AGG - chr4_3:69268821-69268840 None:intergenic 45.0%
! CCTCACACCACCCTTTTATT+AGG + chr4_3:69268818-69268837 Msa0659030:intron 45.0%
! CACACCACCCTTTTATTAGG+AGG + chr4_3:69268821-69268840 Msa0659030:intron 45.0%
CCTTGAATTCCTCCCTGAAA+TGG - chr4_3:69269176-69269195 None:intergenic 45.0%
CCATTTCAGGGAGGAATTCA+AGG + chr4_3:69269173-69269192 Msa0659030:intron 45.0%
CACAAAAGAGAAGACTGGGA+TGG + chr4_3:69269563-69269582 Msa0659030:three_prime_UTR 45.0%
CTTTCTCTGTAACGCGAGTT+AGG - chr4_3:69265491-69265510 None:intergenic 45.0%
CCAATTTGGATTTGGATGCG+AGG - chr4_3:69265550-69265569 None:intergenic 45.0%
CCTCGCATCCAAATCCAAAT+TGG + chr4_3:69265547-69265566 Msa0659030:CDS 45.0%
CTCTTGGTATAGCTGTATGG+CGG + chr4_3:69266059-69266078 Msa0659030:intron 45.0%
ACTTTGCTAAAGGGTCCGAA+GGG + chr4_3:69266123-69266142 Msa0659030:CDS 45.0%
TGAGACAGTGATAGGCATGT+TGG + chr4_3:69266240-69266259 Msa0659030:intron 45.0%
GCATATTGAGAAACAGCAGC+TGG - chr4_3:69266522-69266541 None:intergenic 45.0%
! CAAGGTGCTTTCTCTTAAGG+TGG + chr4_3:69267039-69267058 Msa0659030:intron 45.0%
ACATGGACAATCGGTCTTTG+TGG + chr4_3:69267068-69267087 Msa0659030:intron 45.0%
! GGGAGAAAACTATGGTGTTG+TGG - chr4_3:69267152-69267171 None:intergenic 45.0%
ACAGAGTGATTAGGAGGGAA+GGG - chr4_3:69267173-69267192 None:intergenic 45.0%
TACAGAGTGATTAGGAGGGA+AGG - chr4_3:69267174-69267193 None:intergenic 45.0%
GGGACAGATACAGAGTGATT+AGG - chr4_3:69267182-69267201 None:intergenic 45.0%
!!! CTGATTGTTTTGACTTGGGC+AGG - chr4_3:69267332-69267351 None:intergenic 45.0%
TACATTCATAACCCCAACGC+CGG + chr4_3:69267443-69267462 Msa0659030:intron 45.0%
TTTAACACTGGAGATGCTCC+AGG - chr4_3:69267474-69267493 None:intergenic 45.0%
TGGTCCTCAAGTTCTGTTGT+TGG - chr4_3:69267512-69267531 None:intergenic 45.0%
ATGCAGACATCTCTTGCAAC+AGG + chr4_3:69267902-69267921 Msa0659030:intron 45.0%
! CTTGCAACAGGTGTTACATC+AGG + chr4_3:69267914-69267933 Msa0659030:intron 45.0%
TACAGATGATCTTGGAGCAG+AGG + chr4_3:69267990-69268009 Msa0659030:CDS 45.0%
!! TTTTGTGGCTGCTGCTTGTT+TGG + chr4_3:69268427-69268446 Msa0659030:intron 45.0%
! TTTGTGGCTGCTGCTTGTTT+GGG + chr4_3:69268428-69268447 Msa0659030:intron 45.0%
! GTCTAAGATGGCACCATCAA+AGG - chr4_3:69268672-69268691 None:intergenic 45.0%
!! TGATGGTGCCATCTTAGACT+TGG + chr4_3:69268673-69268692 Msa0659030:intron 45.0%
TAAAATAGCCAAAGCGCAGC+TGG + chr4_3:69268741-69268760 Msa0659030:CDS 45.0%
AAAGGATGCTGTTGAGGCAA+TGG + chr4_3:69268774-69268793 Msa0659030:CDS 45.0%
CCTAATAAAAGGGTGGTGTG+AGG - chr4_3:69268821-69268840 None:intergenic 45.0%
! CCTCACACCACCCTTTTATT+AGG + chr4_3:69268818-69268837 Msa0659030:intron 45.0%
! CACACCACCCTTTTATTAGG+AGG + chr4_3:69268821-69268840 Msa0659030:intron 45.0%
CCTTGAATTCCTCCCTGAAA+TGG - chr4_3:69269176-69269195 None:intergenic 45.0%
CCATTTCAGGGAGGAATTCA+AGG + chr4_3:69269173-69269192 Msa0659030:intron 45.0%
CACAAAAGAGAAGACTGGGA+TGG + chr4_3:69269563-69269582 Msa0659030:three_prime_UTR 45.0%
GCGGTCAAATGCTTCTGCAA+CGG + chr4_3:69266078-69266097 Msa0659030:CDS 50.0%
CGGTCAAATGCTTCTGCAAC+GGG + chr4_3:69266079-69266098 Msa0659030:CDS 50.0%
CCTTTAGCAAAGTGGCGAAC+CGG - chr4_3:69266116-69266135 None:intergenic 50.0%
! CGGTTCGCCACTTTGCTAAA+GGG + chr4_3:69266114-69266133 Msa0659030:CDS 50.0%
CTTCGGACCCTTTAGCAAAG+TGG - chr4_3:69266124-69266143 None:intergenic 50.0%
CACTTTGCTAAAGGGTCCGA+AGG + chr4_3:69266122-69266141 Msa0659030:CDS 50.0%
TCCGAACTTCCTGCCCTTAA+GGG + chr4_3:69266146-69266165 Msa0659030:CDS 50.0%
TCCCTTAAGGGCAGGAAGTT+CGG - chr4_3:69266150-69266169 None:intergenic 50.0%
GAACTCACCGTCTCCCTTAA+GGG - chr4_3:69266162-69266181 None:intergenic 50.0%
CGGTGAGTTCCCCTTTACTT+TGG + chr4_3:69266172-69266191 Msa0659030:intron 50.0%
GAAGATCACCATAGCTCCAG+AGG + chr4_3:69266494-69266513 Msa0659030:CDS 50.0%
!! CAGGGCAAACTTGTTGTCAG+TGG + chr4_3:69266714-69266733 Msa0659030:intron 50.0%
GTCAGTGGCTCAAGATGTCA+AGG + chr4_3:69266729-69266748 Msa0659030:CDS 50.0%
GAGGGAAGGGGAGAAAACTA+TGG - chr4_3:69267160-69267179 None:intergenic 50.0%
CAGAGTGATTAGGAGGGAAG+GGG - chr4_3:69267172-69267191 None:intergenic 50.0%
! TGACTTGGGCAGGAGAAAGT+GGG - chr4_3:69267322-69267341 None:intergenic 50.0%
!! TTGACTTGGGCAGGAGAAAG+TGG - chr4_3:69267323-69267342 None:intergenic 50.0%
! CAGTGCCGGAGATTTAACAC+TGG - chr4_3:69267486-69267505 None:intergenic 50.0%
CAGTGTTAAATCTCCGGCAC+TGG + chr4_3:69267484-69267503 Msa0659030:intron 50.0%
GGGGAAGGATTTAGCATGGA+AGG + chr4_3:69267564-69267583 Msa0659030:intron 50.0%
TCTATCCTCTATGCGTGGAG+TGG + chr4_3:69268461-69268480 Msa0659030:intron 50.0%
ATTGACCACTCCACGCATAG+AGG - chr4_3:69268469-69268488 None:intergenic 50.0%
TCCAGCTGCTCTTCGTACTT+TGG - chr4_3:69268718-69268737 None:intergenic 50.0%
GCAGCTGGAGGAGTTGAAAA+AGG + chr4_3:69268756-69268775 Msa0659030:CDS 50.0%
AGCAGGAGAATCAGGGAGAA+CGG - chr4_3:69268897-69268916 None:intergenic 50.0%
GGAATTCAAGGATGAGCCTG+CGG + chr4_3:69269185-69269204 Msa0659030:CDS 50.0%
GGCGGTTGACGTCAAAACTT+TGG + chr4_3:69269206-69269225 Msa0659030:CDS 50.0%
GCGGTCAAATGCTTCTGCAA+CGG + chr4_3:69266078-69266097 Msa0659030:CDS 50.0%
CGGTCAAATGCTTCTGCAAC+GGG + chr4_3:69266079-69266098 Msa0659030:CDS 50.0%
CCTTTAGCAAAGTGGCGAAC+CGG - chr4_3:69266116-69266135 None:intergenic 50.0%
! CGGTTCGCCACTTTGCTAAA+GGG + chr4_3:69266114-69266133 Msa0659030:CDS 50.0%
CTTCGGACCCTTTAGCAAAG+TGG - chr4_3:69266124-69266143 None:intergenic 50.0%
CACTTTGCTAAAGGGTCCGA+AGG + chr4_3:69266122-69266141 Msa0659030:CDS 50.0%
TCCGAACTTCCTGCCCTTAA+GGG + chr4_3:69266146-69266165 Msa0659030:CDS 50.0%
TCCCTTAAGGGCAGGAAGTT+CGG - chr4_3:69266150-69266169 None:intergenic 50.0%
GAACTCACCGTCTCCCTTAA+GGG - chr4_3:69266162-69266181 None:intergenic 50.0%
CGGTGAGTTCCCCTTTACTT+TGG + chr4_3:69266172-69266191 Msa0659030:intron 50.0%
GAAGATCACCATAGCTCCAG+AGG + chr4_3:69266494-69266513 Msa0659030:CDS 50.0%
!! CAGGGCAAACTTGTTGTCAG+TGG + chr4_3:69266714-69266733 Msa0659030:intron 50.0%
GTCAGTGGCTCAAGATGTCA+AGG + chr4_3:69266729-69266748 Msa0659030:CDS 50.0%
GAGGGAAGGGGAGAAAACTA+TGG - chr4_3:69267160-69267179 None:intergenic 50.0%
CAGAGTGATTAGGAGGGAAG+GGG - chr4_3:69267172-69267191 None:intergenic 50.0%
! TGACTTGGGCAGGAGAAAGT+GGG - chr4_3:69267322-69267341 None:intergenic 50.0%
!! TTGACTTGGGCAGGAGAAAG+TGG - chr4_3:69267323-69267342 None:intergenic 50.0%
! CAGTGCCGGAGATTTAACAC+TGG - chr4_3:69267486-69267505 None:intergenic 50.0%
CAGTGTTAAATCTCCGGCAC+TGG + chr4_3:69267484-69267503 Msa0659030:intron 50.0%
GGGGAAGGATTTAGCATGGA+AGG + chr4_3:69267564-69267583 Msa0659030:intron 50.0%
TCTATCCTCTATGCGTGGAG+TGG + chr4_3:69268461-69268480 Msa0659030:intron 50.0%
ATTGACCACTCCACGCATAG+AGG - chr4_3:69268469-69268488 None:intergenic 50.0%
TCCAGCTGCTCTTCGTACTT+TGG - chr4_3:69268718-69268737 None:intergenic 50.0%
GCAGCTGGAGGAGTTGAAAA+AGG + chr4_3:69268756-69268775 Msa0659030:CDS 50.0%
AGCAGGAGAATCAGGGAGAA+CGG - chr4_3:69268897-69268916 None:intergenic 50.0%
GGAATTCAAGGATGAGCCTG+CGG + chr4_3:69269185-69269204 Msa0659030:CDS 50.0%
GGCGGTTGACGTCAAAACTT+TGG + chr4_3:69269206-69269225 Msa0659030:CDS 50.0%
!! GCAACGGGAGTTTGCTGTTC+CGG + chr4_3:69266094-69266113 Msa0659030:CDS 55.0%
! CCGGTTCGCCACTTTGCTAA+AGG + chr4_3:69266113-69266132 Msa0659030:CDS 55.0%
GTCCGAACTTCCTGCCCTTA+AGG + chr4_3:69266145-69266164 Msa0659030:CDS 55.0%
CTTCCTGCCCTTAAGGGAGA+CGG + chr4_3:69266152-69266171 Msa0659030:CDS 55.0%
GGAACTCACCGTCTCCCTTA+AGG - chr4_3:69266163-69266182 None:intergenic 55.0%
!! AGCTGGATCCTCTGGAGCTA+TGG - chr4_3:69266505-69266524 None:intergenic 55.0%
GAAACAGCAGCTGGATCCTC+TGG - chr4_3:69266513-69266532 None:intergenic 55.0%
! TGTGGGGGTGGTTCTATCGT+GGG - chr4_3:69267202-69267221 None:intergenic 55.0%
!! TTTTGACGAAGGTGTGGGGG+TGG - chr4_3:69267214-69267233 None:intergenic 55.0%
AACACTGGAGATGCTCCAGG+TGG - chr4_3:69267471-69267490 None:intergenic 55.0%
GGCGCCAACAACAGAACTTG+AGG + chr4_3:69267505-69267524 Msa0659030:intron 55.0%
GCCAAAGTACGAAGAGCAGC+TGG + chr4_3:69268714-69268733 Msa0659030:CDS 55.0%
AATAGCCAAAGCGCAGCTGG+AGG + chr4_3:69268744-69268763 Msa0659030:CDS 55.0%
CCTCCCTGAAATGGCAGACA+AGG - chr4_3:69269167-69269186 None:intergenic 55.0%
! CCTTGTCTGCCATTTCAGGG+AGG + chr4_3:69269164-69269183 Msa0659030:intron 55.0%
ATTCAAGGATGAGCCTGCGG+CGG + chr4_3:69269188-69269207 Msa0659030:CDS 55.0%
!! GCAACGGGAGTTTGCTGTTC+CGG + chr4_3:69266094-69266113 Msa0659030:CDS 55.0%
! CCGGTTCGCCACTTTGCTAA+AGG + chr4_3:69266113-69266132 Msa0659030:CDS 55.0%
GTCCGAACTTCCTGCCCTTA+AGG + chr4_3:69266145-69266164 Msa0659030:CDS 55.0%
CTTCCTGCCCTTAAGGGAGA+CGG + chr4_3:69266152-69266171 Msa0659030:CDS 55.0%
GGAACTCACCGTCTCCCTTA+AGG - chr4_3:69266163-69266182 None:intergenic 55.0%
!! AGCTGGATCCTCTGGAGCTA+TGG - chr4_3:69266505-69266524 None:intergenic 55.0%
GAAACAGCAGCTGGATCCTC+TGG - chr4_3:69266513-69266532 None:intergenic 55.0%
! TGTGGGGGTGGTTCTATCGT+GGG - chr4_3:69267202-69267221 None:intergenic 55.0%
!! TTTTGACGAAGGTGTGGGGG+TGG - chr4_3:69267214-69267233 None:intergenic 55.0%
AACACTGGAGATGCTCCAGG+TGG - chr4_3:69267471-69267490 None:intergenic 55.0%
GGCGCCAACAACAGAACTTG+AGG + chr4_3:69267505-69267524 Msa0659030:intron 55.0%
GCCAAAGTACGAAGAGCAGC+TGG + chr4_3:69268714-69268733 Msa0659030:CDS 55.0%
AATAGCCAAAGCGCAGCTGG+AGG + chr4_3:69268744-69268763 Msa0659030:CDS 55.0%
CCTCCCTGAAATGGCAGACA+AGG - chr4_3:69269167-69269186 None:intergenic 55.0%
! CCTTGTCTGCCATTTCAGGG+AGG + chr4_3:69269164-69269183 Msa0659030:intron 55.0%
ATTCAAGGATGAGCCTGCGG+CGG + chr4_3:69269188-69269207 Msa0659030:CDS 55.0%
GGCAGGAAGTTCGGACCCTT+CGG - chr4_3:69266141-69266160 None:intergenic 60.0%
TCACCGTCTCCCTTAAGGGC+AGG - chr4_3:69266158-69266177 None:intergenic 60.0%
! GTGTGGGGGTGGTTCTATCG+TGG - chr4_3:69267203-69267222 None:intergenic 60.0%
GGGCAGGAGAAAGTGGGTGT+GGG - chr4_3:69267316-69267335 None:intergenic 60.0%
TGGGCAGGAGAAAGTGGGTG+TGG - chr4_3:69267317-69267336 None:intergenic 60.0%
GGAGATGCTCCAGGTGGAAC+CGG - chr4_3:69267465-69267484 None:intergenic 60.0%
TCTGTTGTTGGCGCCAGTGC+CGG - chr4_3:69267500-69267519 None:intergenic 60.0%
CAACTCCTCCAGCTGCGCTT+TGG - chr4_3:69268752-69268771 None:intergenic 60.0%
!! GTTTTGACGTCAACCGCCGC+AGG - chr4_3:69269204-69269223 None:intergenic 60.0%
GGCAGGAAGTTCGGACCCTT+CGG - chr4_3:69266141-69266160 None:intergenic 60.0%
TCACCGTCTCCCTTAAGGGC+AGG - chr4_3:69266158-69266177 None:intergenic 60.0%
! GTGTGGGGGTGGTTCTATCG+TGG - chr4_3:69267203-69267222 None:intergenic 60.0%
GGGCAGGAGAAAGTGGGTGT+GGG - chr4_3:69267316-69267335 None:intergenic 60.0%
TGGGCAGGAGAAAGTGGGTG+TGG - chr4_3:69267317-69267336 None:intergenic 60.0%
GGAGATGCTCCAGGTGGAAC+CGG - chr4_3:69267465-69267484 None:intergenic 60.0%
TCTGTTGTTGGCGCCAGTGC+CGG - chr4_3:69267500-69267519 None:intergenic 60.0%
CAACTCCTCCAGCTGCGCTT+TGG - chr4_3:69268752-69268771 None:intergenic 60.0%
!! GTTTTGACGTCAACCGCCGC+AGG - chr4_3:69269204-69269223 None:intergenic 60.0%
GAGGCGTGAAGCGAGTGCCA+TGG - chr4_3:69265531-69265550 None:intergenic 65.0%
TCCAGGTGGAACCGGCGTTG+GGG - chr4_3:69267457-69267476 None:intergenic 65.0%
CTCCAGGTGGAACCGGCGTT+GGG - chr4_3:69267458-69267477 None:intergenic 65.0%
GAGGCGTGAAGCGAGTGCCA+TGG - chr4_3:69265531-69265550 None:intergenic 65.0%
TCCAGGTGGAACCGGCGTTG+GGG - chr4_3:69267457-69267476 None:intergenic 65.0%
CTCCAGGTGGAACCGGCGTT+GGG - chr4_3:69267458-69267477 None:intergenic 65.0%
!! ACCCCAACGCCGGTTCCACC+TGG + chr4_3:69267453-69267472 Msa0659030:intron 70.0%
GCTCCAGGTGGAACCGGCGT+TGG - chr4_3:69267459-69267478 None:intergenic 70.0%
!! ACCCCAACGCCGGTTCCACC+TGG + chr4_3:69267453-69267472 Msa0659030:intron 70.0%
GCTCCAGGTGGAACCGGCGT+TGG - chr4_3:69267459-69267478 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 69265338 69269765 69265338 ID=Msa0659030;Name=Msa0659030
chr4_3 mRNA 69265338 69269765 69265338 ID=Msa0659030-mRNA-1;Parent=Msa0659030;Name=Msa0659030-mRNA-1;_AED=0.03;_eAED=0.03;_QI=192|1|1|1|1|1|7|517|244
chr4_3 exon 69265338 69265568 69265338 ID=Msa0659030-mRNA-1:exon:20251;Parent=Msa0659030-mRNA-1
chr4_3 exon 69266071 69266173 69266071 ID=Msa0659030-mRNA-1:exon:20252;Parent=Msa0659030-mRNA-1
chr4_3 exon 69266424 69266568 69266424 ID=Msa0659030-mRNA-1:exon:20253;Parent=Msa0659030-mRNA-1
chr4_3 exon 69266717 69266827 69266717 ID=Msa0659030-mRNA-1:exon:20254;Parent=Msa0659030-mRNA-1
chr4_3 exon 69267981 69268127 69267981 ID=Msa0659030-mRNA-1:exon:20255;Parent=Msa0659030-mRNA-1
chr4_3 exon 69268690 69268812 69268690 ID=Msa0659030-mRNA-1:exon:20256;Parent=Msa0659030-mRNA-1
chr4_3 exon 69269182 69269765 69269182 ID=Msa0659030-mRNA-1:exon:20257;Parent=Msa0659030-mRNA-1
chr4_3 five_prime_UTR 69265338 69265529 69265338 ID=Msa0659030-mRNA-1:five_prime_utr;Parent=Msa0659030-mRNA-1
chr4_3 CDS 69265530 69265568 69265530 ID=Msa0659030-mRNA-1:cds;Parent=Msa0659030-mRNA-1
chr4_3 CDS 69266071 69266173 69266071 ID=Msa0659030-mRNA-1:cds;Parent=Msa0659030-mRNA-1
chr4_3 CDS 69266424 69266568 69266424 ID=Msa0659030-mRNA-1:cds;Parent=Msa0659030-mRNA-1
chr4_3 CDS 69266717 69266827 69266717 ID=Msa0659030-mRNA-1:cds;Parent=Msa0659030-mRNA-1
chr4_3 CDS 69267981 69268127 69267981 ID=Msa0659030-mRNA-1:cds;Parent=Msa0659030-mRNA-1
chr4_3 CDS 69268690 69268812 69268690 ID=Msa0659030-mRNA-1:cds;Parent=Msa0659030-mRNA-1
chr4_3 CDS 69269182 69269248 69269182 ID=Msa0659030-mRNA-1:cds;Parent=Msa0659030-mRNA-1
chr4_3 three_prime_UTR 69269249 69269765 69269249 ID=Msa0659030-mRNA-1:three_prime_utr;Parent=Msa0659030-mRNA-1
Gene Sequence

>Msa0659030

ATGGCACTCGCTTCACGCCTCGCATCCAAATCCAAATTGCTGTATGGCGGTCAAATGCTTCTGCAACGGGAGTTTGCTGTTCCGGTTCGCCACTTTGCTAAAGGGTCCGAAGGGTCCGAACTTCCTGCCCTTAAGGGAGACGAGATGCTGAAAAACATTTATTTGGAAGTGAAGAACAAATTTGAGACTGCCATCGGAATATTAAGGAAGGAGAAGATCACCATAGCTCCAGAGGATCCAGCTGCTGTTTCTCAATATGCGAAGGTCATGAAAACTATCAGAGAGAAGGCAAACTTGTTGTCAGTGGCTCAAGATGTCAAGGCTGACATTGATATAGAGACACAAGATATTCCTGATGCTCGAACTTATCTTTTGACCTTGAAGGAAATAAGAACCAAGAGAGGTCTTACAGATGATCTTGGAGCAGAGGCTTTAATGTTTGATGCATTGGAGAAAATTGAAAAGGATTTAAAGAAACCCCTATTGAGAAATGATAAGAAAGGAATGGACCTTCTTTTGGCAGAGTTTGATAAGATTAATAACAAACTTGGAATTCGAAAAGAAGAATTGCCAAAGTACGAAGAGCAGCTGGAGCTTAAAATAGCCAAAGCGCAGCTGGAGGAGTTGAAAAAGGATGCTGTTGAGGCAATGGAAACTCAAAAGAAAAGGGAGGAATTCAAGGATGAGCCTGCGGCGGTTGACGTCAAAACTTTGGACATCCGGAACTTCCTTTAA

Protein sequence

>Msa0659030

MALASRLASKSKLLYGGQMLLQREFAVPVRHFAKGSEGSELPALKGDEMLKNIYLEVKNKFETAIGILRKEKITIAPEDPAAVSQYAKVMKTIREKANLLSVAQDVKADIDIETQDIPDARTYLLTLKEIRTKRGLTDDLGAEALMFDALEKIEKDLKKPLLRNDKKGMDLLLAEFDKINNKLGIRKEELPKYEEQLELKIAKAQLEELKKDAVEAMETQKKREEFKDEPAAVDVKTLDIRNFL*