Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245060 | AES65381.1 | 97.638 | 127 | 3 | 0 | 1 | 127 | 5 | 131 | 1.23e-86 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245060 | sp|Q8LFQ6|GRXC4_ARATH | 65.546 | 119 | 39 | 1 | 3 | 119 | 9 | 127 | 2.11e-53 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245060 | G7IID8 | 97.638 | 127 | 3 | 0 | 1 | 127 | 5 | 131 | 5.90e-87 | 258 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0245060 | 0.813314 | 2.724748e-51 | -8.615850e-47 |
| Msa0007850 | Msa0245060 | 0.840743 | 7.233868e-58 | -8.615850e-47 |
| Msa0029260 | Msa0245060 | 0.812397 | 4.327440e-51 | -8.615850e-47 |
| Msa0031510 | Msa0245060 | 0.817846 | 2.668388e-52 | -8.615850e-47 |
| Msa0033880 | Msa0245060 | 0.836625 | 8.388216e-57 | -8.615850e-47 |
| Msa0042280 | Msa0245060 | 0.821453 | 4.004807e-53 | -8.615850e-47 |
| Msa0043860 | Msa0245060 | 0.845973 | 2.906946e-59 | -8.615850e-47 |
| Msa0045730 | Msa0245060 | 0.814983 | 1.166723e-51 | -8.615850e-47 |
| Msa0048180 | Msa0245060 | 0.831934 | 1.259620e-55 | -8.615850e-47 |
| Msa0052350 | Msa0245060 | -0.802196 | 6.291735e-49 | -8.615850e-47 |
| Msa0055100 | Msa0245060 | 0.817908 | 2.583806e-52 | -8.615850e-47 |
| Msa0056270 | Msa0245060 | 0.822052 | 2.911971e-53 | -8.615850e-47 |
| Msa0057610 | Msa0245060 | 0.850311 | 1.843591e-60 | -8.615850e-47 |
| Msa0061970 | Msa0245060 | 0.854851 | 9.342903e-62 | -8.615850e-47 |
| Msa0068000 | Msa0245060 | 0.833120 | 6.398595e-56 | -8.615850e-47 |
| Msa0068020 | Msa0245060 | 0.856354 | 3.404993e-62 | -8.615850e-47 |
| Msa0077010 | Msa0245060 | 0.836211 | 1.068535e-56 | -8.615850e-47 |
| Msa0091610 | Msa0245060 | 0.806341 | 8.621146e-50 | -8.615850e-47 |
| Msa0093010 | Msa0245060 | 0.823972 | 1.038328e-53 | -8.615850e-47 |
| Msa0094580 | Msa0245060 | 0.804005 | 2.658952e-49 | -8.615850e-47 |
| Msa0101180 | Msa0245060 | 0.829051 | 6.390471e-55 | -8.615850e-47 |
| Msa0103240 | Msa0245060 | 0.801215 | 1.000230e-48 | -8.615850e-47 |
| Msa0113130 | Msa0245060 | 0.824831 | 6.520540e-54 | -8.615850e-47 |
| Msa0113240 | Msa0245060 | 0.828854 | 7.130484e-55 | -8.615850e-47 |
| Msa0115370 | Msa0245060 | 0.826834 | 2.182283e-54 | -8.615850e-47 |
| Msa0116130 | Msa0245060 | 0.812048 | 5.156597e-51 | -8.615850e-47 |
| Msa0118710 | Msa0245060 | 0.806045 | 9.951617e-50 | -8.615850e-47 |
| Msa0126520 | Msa0245060 | 0.808428 | 3.111619e-50 | -8.615850e-47 |
| Msa0126840 | Msa0245060 | 0.813957 | 1.967963e-51 | -8.615850e-47 |
| Msa0127850 | Msa0245060 | 0.835158 | 1.974224e-56 | -8.615850e-47 |
| Msa0165950 | Msa0245060 | 0.818719 | 1.692514e-52 | -8.615850e-47 |
| Msa0166750 | Msa0245060 | 0.857355 | 1.726692e-62 | -8.615850e-47 |
| Msa0167480 | Msa0245060 | 0.821399 | 4.121776e-53 | -8.615850e-47 |
| Msa0169300 | Msa0245060 | 0.811713 | 6.099898e-51 | -8.615850e-47 |
| Msa0174000 | Msa0245060 | 0.821593 | 3.717811e-53 | -8.615850e-47 |
| Msa0180020 | Msa0245060 | 0.828390 | 9.231156e-55 | -8.615850e-47 |
| Msa0183460 | Msa0245060 | 0.803633 | 3.175643e-49 | -8.615850e-47 |
| Msa0183870 | Msa0245060 | 0.806688 | 7.286022e-50 | -8.615850e-47 |
| Msa0202110 | Msa0245060 | 0.815042 | 1.132238e-51 | -8.615850e-47 |
| Msa0218830 | Msa0245060 | 0.816098 | 6.588877e-52 | -8.615850e-47 |
| Msa0221030 | Msa0245060 | 0.835821 | 1.342366e-56 | -8.615850e-47 |
| Msa0224560 | Msa0245060 | 0.815732 | 7.949020e-52 | -8.615850e-47 |
| Msa0226330 | Msa0245060 | 0.815101 | 1.098731e-51 | -8.615850e-47 |
| Msa0226460 | Msa0245060 | 0.820157 | 7.955584e-53 | -8.615850e-47 |
| Msa0230520 | Msa0245060 | 0.819958 | 8.833066e-53 | -8.615850e-47 |
| Msa0231100 | Msa0245060 | 0.850253 | 1.913871e-60 | -8.615850e-47 |
| Msa0231790 | Msa0245060 | 0.808993 | 2.356594e-50 | -8.615850e-47 |
| Msa0241830 | Msa0245060 | 0.820167 | 7.912474e-53 | -8.615850e-47 |
| Msa0244980 | Msa0245060 | 0.816206 | 6.231705e-52 | -8.615850e-47 |
| Msa0245060 | Msa0245580 | 0.833435 | 5.341082e-56 | -8.615850e-47 |
| Msa0245060 | Msa0262480 | 0.832006 | 1.209221e-55 | -8.615850e-47 |
| Msa0245060 | Msa0269470 | 0.826542 | 2.562439e-54 | -8.615850e-47 |
| Msa0245060 | Msa0280430 | 0.810271 | 1.252328e-50 | -8.615850e-47 |
| Msa0245060 | Msa0291520 | 0.831604 | 1.519304e-55 | -8.615850e-47 |
| Msa0245060 | Msa0296250 | 0.836452 | 9.281364e-57 | -8.615850e-47 |
| Msa0245060 | Msa0300350 | 0.829697 | 4.452651e-55 | -8.615850e-47 |
| Msa0245060 | Msa0304590 | 0.827005 | 1.985942e-54 | -8.615850e-47 |
| Msa0245060 | Msa0304660 | 0.835072 | 2.076428e-56 | -8.615850e-47 |
| Msa0245060 | Msa0331700 | 0.835316 | 1.801576e-56 | -8.615850e-47 |
| Msa0245060 | Msa0348830 | 0.853693 | 2.019164e-61 | -8.615850e-47 |
| Msa0245060 | Msa0358770 | 0.847154 | 1.383461e-59 | -8.615850e-47 |
| Msa0245060 | Msa0376820 | 0.811995 | 5.295327e-51 | -8.615850e-47 |
| Msa0245060 | Msa0384880 | 0.853303 | 2.611775e-61 | -8.615850e-47 |
| Msa0245060 | Msa0389510 | 0.854414 | 1.250429e-61 | -8.615850e-47 |
| Msa0245060 | Msa0408240 | -0.843950 | 1.022162e-58 | -8.615850e-47 |
| Msa0245060 | Msa0416400 | 0.803874 | 2.830640e-49 | -8.615850e-47 |
| Msa0245060 | Msa0419520 | 0.802840 | 4.635416e-49 | -8.615850e-47 |
| Msa0245060 | Msa0423750 | 0.856484 | 3.119143e-62 | -8.615850e-47 |
| Msa0245060 | Msa0427860 | -0.815045 | 1.130504e-51 | -8.615850e-47 |
| Msa0245060 | Msa0443390 | 0.838899 | 2.185596e-57 | -8.615850e-47 |
| Msa0245060 | Msa0453500 | 0.804281 | 2.328672e-49 | -8.615850e-47 |
| Msa0245060 | Msa0456430 | 0.808955 | 2.401626e-50 | -8.615850e-47 |
| Msa0245060 | Msa0458640 | 0.803403 | 3.545046e-49 | -8.615850e-47 |
| Msa0245060 | Msa0472130 | 0.808640 | 2.804352e-50 | -8.615850e-47 |
| Msa0245060 | Msa0474090 | -0.814535 | 1.466623e-51 | -8.615850e-47 |
| Msa0245060 | Msa0478580 | 0.800102 | 1.687152e-48 | -8.615850e-47 |
| Msa0245060 | Msa0484740 | 0.812412 | 4.294665e-51 | -8.615850e-47 |
| Msa0245060 | Msa0526540 | 0.822788 | 1.963488e-53 | -8.615850e-47 |
| Msa0245060 | Msa0527150 | 0.839697 | 1.356694e-57 | -8.615850e-47 |
| Msa0245060 | Msa0531250 | 0.803293 | 3.735248e-49 | -8.615850e-47 |
| Msa0245060 | Msa0534750 | 0.864764 | 9.614519e-65 | -8.615850e-47 |
| Msa0245060 | Msa0547990 | 0.807373 | 5.217942e-50 | -8.615850e-47 |
| Msa0245060 | Msa0550540 | 0.823751 | 1.170304e-53 | -8.615850e-47 |
| Msa0245060 | Msa0550570 | 0.831063 | 2.064440e-55 | -8.615850e-47 |
| Msa0245060 | Msa0576940 | 0.814203 | 1.735971e-51 | -8.615850e-47 |
| Msa0245060 | Msa0580230 | 0.854938 | 8.815822e-62 | -8.615850e-47 |
| Msa0245060 | Msa0580280 | 0.825080 | 5.697894e-54 | -8.615850e-47 |
| Msa0245060 | Msa0581070 | 0.805125 | 1.552050e-49 | -8.615850e-47 |
| Msa0245060 | Msa0593700 | 0.875527 | 2.872953e-68 | -8.615850e-47 |
| Msa0245060 | Msa0607690 | 0.812299 | 4.546582e-51 | -8.615850e-47 |
| Msa0245060 | Msa0609000 | 0.860376 | 2.157096e-63 | -8.615850e-47 |
| Msa0245060 | Msa0610310 | 0.800423 | 1.451583e-48 | -8.615850e-47 |
| Msa0245060 | Msa0610390 | 0.813953 | 1.971068e-51 | -8.615850e-47 |
| Msa0245060 | Msa0615580 | 0.826182 | 3.122120e-54 | -8.615850e-47 |
| Msa0245060 | Msa0618930 | 0.831833 | 1.334153e-55 | -8.615850e-47 |
| Msa0245060 | Msa0619860 | 0.824095 | 9.719957e-54 | -8.615850e-47 |
| Msa0245060 | Msa0619920 | 0.804000 | 2.665059e-49 | -8.615850e-47 |
| Msa0245060 | Msa0623200 | 0.832439 | 9.447190e-56 | -8.615850e-47 |
| Msa0245060 | Msa0628420 | 0.804449 | 2.148305e-49 | -8.615850e-47 |
| Msa0245060 | Msa0631350 | 0.809806 | 1.577163e-50 | -8.615850e-47 |
| Msa0245060 | Msa0633570 | 0.878718 | 2.237550e-69 | -8.615850e-47 |
| Msa0245060 | Msa0644030 | 0.819242 | 1.287492e-52 | -8.615850e-47 |
| Msa0245060 | Msa0654870 | 0.809295 | 2.030669e-50 | -8.615850e-47 |
| Msa0245060 | Msa0659030 | 0.809702 | 1.660750e-50 | -8.615850e-47 |
| Msa0245060 | Msa0659990 | 0.825169 | 5.427289e-54 | -8.615850e-47 |
| Msa0245060 | Msa0662630 | 0.815929 | 7.186533e-52 | -8.615850e-47 |
| Msa0245060 | Msa0665440 | 0.800955 | 1.130190e-48 | -8.615850e-47 |
| Msa0245060 | Msa0666230 | 0.867458 | 1.348337e-65 | -8.615850e-47 |
| Msa0245060 | Msa0672100 | 0.855375 | 6.579408e-62 | -8.615850e-47 |
| Msa0245060 | Msa0683780 | 0.835585 | 1.539975e-56 | -8.615850e-47 |
| Msa0245060 | Msa0690770 | 0.815127 | 1.084167e-51 | -8.615850e-47 |
| Msa0245060 | Msa0691690 | 0.818676 | 1.730968e-52 | -8.615850e-47 |
| Msa0245060 | Msa0693210 | 0.841231 | 5.387775e-58 | -8.615850e-47 |
| Msa0245060 | Msa0694990 | 0.808964 | 2.391214e-50 | -8.615850e-47 |
| Msa0245060 | Msa0697720 | 0.801141 | 1.035863e-48 | -8.615850e-47 |
| Msa0245060 | Msa0699190 | 0.844332 | 8.070852e-59 | -8.615850e-47 |
| Msa0245060 | Msa0704660 | 0.816444 | 5.512608e-52 | -8.615850e-47 |
| Msa0245060 | Msa0705000 | 0.844003 | 9.893272e-59 | -8.615850e-47 |
| Msa0245060 | Msa0705040 | 0.836286 | 1.023062e-56 | -8.615850e-47 |
| Msa0245060 | Msa0706390 | 0.812742 | 3.637196e-51 | -8.615850e-47 |
| Msa0245060 | Msa0706500 | 0.854327 | 1.324888e-61 | -8.615850e-47 |
| Msa0245060 | Msa0707390 | 0.824870 | 6.383711e-54 | -8.615850e-47 |
| Msa0245060 | Msa0729200 | 0.824179 | 9.286415e-54 | -8.615850e-47 |
| Msa0245060 | Msa0738100 | 0.812204 | 4.767624e-51 | -8.615850e-47 |
| Msa0245060 | Msa0745200 | 0.823364 | 1.441340e-53 | -8.615850e-47 |
| Msa0245060 | Msa0769590 | 0.829137 | 6.092159e-55 | -8.615850e-47 |
| Msa0245060 | Msa0783490 | 0.830538 | 2.776199e-55 | -8.615850e-47 |
| Msa0245060 | Msa0785130 | 0.846528 | 2.052147e-59 | -8.615850e-47 |
| Msa0245060 | Msa0794050 | 0.807089 | 5.991541e-50 | -8.615850e-47 |
| Msa0245060 | Msa0806880 | 0.828398 | 9.189881e-55 | -8.615850e-47 |
| Msa0245060 | Msa0808800 | 0.840833 | 6.853727e-58 | -8.615850e-47 |
| Msa0245060 | Msa0817540 | 0.806709 | 7.210548e-50 | -8.615850e-47 |
| Msa0245060 | Msa0818770 | 0.808023 | 3.796924e-50 | -8.615850e-47 |
| Msa0245060 | Msa0819540 | 0.856169 | 3.858337e-62 | -8.615850e-47 |
| Msa0245060 | Msa0822170 | 0.811641 | 6.323212e-51 | -8.615850e-47 |
| Msa0245060 | Msa0822180 | 0.810857 | 9.357793e-51 | -8.615850e-47 |
| Msa0245060 | Msa0826500 | 0.808325 | 3.273748e-50 | -8.615850e-47 |
| Msa0245060 | Msa0858440 | 0.814497 | 1.495129e-51 | -8.615850e-47 |
| Msa0245060 | Msa0897400 | 0.817452 | 3.274167e-52 | -8.615850e-47 |
| Msa0245060 | Msa0901450 | 0.809651 | 1.702755e-50 | -8.615850e-47 |
| Msa0245060 | Msa0913240 | 0.836965 | 6.869388e-57 | -8.615850e-47 |
| Msa0245060 | Msa0921870 | 0.803278 | 3.761652e-49 | -8.615850e-47 |
| Msa0245060 | Msa0928120 | 0.819985 | 8.712035e-53 | -8.615850e-47 |
| Msa0245060 | Msa0943170 | 0.852514 | 4.392674e-61 | -8.615850e-47 |
| Msa0245060 | Msa0960830 | 0.872194 | 3.834957e-67 | -8.615850e-47 |
| Msa0245060 | Msa0963020 | 0.876902 | 9.649718e-69 | -8.615850e-47 |
| Msa0245060 | Msa0968440 | 0.837240 | 5.839909e-57 | -8.615850e-47 |
| Msa0245060 | Msa0973320 | 0.814407 | 1.564790e-51 | -8.615850e-47 |
| Msa0245060 | Msa0994290 | 0.816635 | 4.995272e-52 | -8.615850e-47 |
| Msa0245060 | Msa1001350 | 0.801254 | 9.820047e-49 | -8.615850e-47 |
| Msa0245060 | Msa1019240 | 0.827956 | 1.174471e-54 | -8.615850e-47 |
| Msa0245060 | Msa1019260 | 0.811282 | 7.566817e-51 | -8.615850e-47 |
| Msa0245060 | Msa1025940 | 0.864394 | 1.255478e-64 | -8.615850e-47 |
| Msa0245060 | Msa1029970 | 0.819000 | 1.461425e-52 | -8.615850e-47 |
| Msa0245060 | Msa1036550 | 0.810410 | 1.169022e-50 | -8.615850e-47 |
| Msa0245060 | Msa1039900 | 0.831002 | 2.136527e-55 | -8.615850e-47 |
| Msa0245060 | Msa1040580 | 0.805793 | 1.124229e-49 | -8.615850e-47 |
| Msa0245060 | Msa1048690 | 0.803507 | 3.372519e-49 | -8.615850e-47 |
| Msa0245060 | Msa1070390 | 0.821757 | 3.407449e-53 | -8.615850e-47 |
| Msa0245060 | Msa1072710 | 0.864292 | 1.350827e-64 | -8.615850e-47 |
| Msa0245060 | Msa1083880 | 0.837440 | 5.190673e-57 | -8.615850e-47 |
| Msa0245060 | Msa1104210 | 0.803840 | 2.877064e-49 | -8.615850e-47 |
| Msa0245060 | Msa1115620 | 0.801162 | 1.025652e-48 | -8.615850e-47 |
| Msa0245060 | Msa1120810 | 0.814900 | 1.217327e-51 | -8.615850e-47 |
| Msa0245060 | Msa1121680 | 0.829624 | 4.638660e-55 | -8.615850e-47 |
| Msa0245060 | Msa1122820 | 0.814297 | 1.655596e-51 | -8.615850e-47 |
| Msa0245060 | Msa1123350 | 0.822179 | 2.720778e-53 | -8.615850e-47 |
| Msa0245060 | Msa1131170 | 0.822869 | 1.880420e-53 | -8.615850e-47 |
| Msa0245060 | Msa1131560 | 0.821170 | 4.655392e-53 | -8.615850e-47 |
| Msa0245060 | Msa1135800 | -0.806139 | 9.512143e-50 | -8.615850e-47 |
| Msa0245060 | Msa1135810 | -0.815439 | 9.239856e-52 | -8.615850e-47 |
| Msa0245060 | Msa1138870 | 0.808385 | 3.178545e-50 | -8.615850e-47 |
| Msa0245060 | Msa1165780 | 0.834665 | 2.628822e-56 | -8.615850e-47 |
| Msa0245060 | Msa1166870 | 0.852680 | 3.938731e-61 | -8.615850e-47 |
| Msa0245060 | Msa1179980 | 0.811480 | 6.855834e-51 | -8.615850e-47 |
| Msa0245060 | Msa1184370 | 0.847171 | 1.369003e-59 | -8.615850e-47 |
| Msa0245060 | Msa1201810 | 0.801378 | 9.261793e-49 | -8.615850e-47 |
| Msa0245060 | Msa1201830 | 0.818192 | 2.228867e-52 | -8.615850e-47 |
| Msa0245060 | Msa1202580 | 0.834301 | 3.244990e-56 | -8.615850e-47 |
| Msa0245060 | Msa1205850 | 0.802195 | 6.295491e-49 | -8.615850e-47 |
| Msa0245060 | Msa1206090 | 0.831804 | 1.356012e-55 | -8.615850e-47 |
| Msa0245060 | Msa1208020 | 0.840850 | 6.782630e-58 | -8.615850e-47 |
| Msa0245060 | Msa1211830 | 0.810439 | 1.152308e-50 | -8.615850e-47 |
| Msa0245060 | Msa1227690 | 0.845802 | 3.236358e-59 | -8.615850e-47 |
| Msa0245060 | Msa1230580 | 0.830019 | 3.716192e-55 | -8.615850e-47 |
| Msa0245060 | Msa1256770 | 0.875462 | 3.024641e-68 | -8.615850e-47 |
| Msa0245060 | Msa1256950 | 0.829114 | 6.169757e-55 | -8.615850e-47 |
| Msa0245060 | Msa1262890 | 0.803613 | 3.206363e-49 | -8.615850e-47 |
| Msa0245060 | Msa1264210 | 0.800620 | 1.322936e-48 | -8.615850e-47 |
| Msa0245060 | Msa1270620 | 0.816248 | 6.099790e-52 | -8.615850e-47 |
| Msa0245060 | Msa1270690 | 0.810887 | 9.217860e-51 | -8.615850e-47 |
| Msa0245060 | Msa1294840 | 0.824746 | 6.830339e-54 | -8.615850e-47 |
| Msa0245060 | Msa1298050 | 0.858540 | 7.680851e-63 | -8.615850e-47 |
| Msa0245060 | Msa1299700 | 0.801459 | 8.913883e-49 | -8.615850e-47 |
| Msa0245060 | Msa1329540 | 0.852045 | 5.971313e-61 | -8.615850e-47 |
| Msa0245060 | Msa1331250 | 0.846262 | 2.425684e-59 | -8.615850e-47 |
| Msa0245060 | Msa1331710 | 0.850033 | 2.205513e-60 | -8.615850e-47 |
| Msa0245060 | Msa1349570 | 0.857509 | 1.555107e-62 | -8.615850e-47 |
| Msa0245060 | Msa1351540 | 0.804757 | 1.853200e-49 | -8.615850e-47 |
| Msa0245060 | Msa1362420 | 0.809835 | 1.554509e-50 | -8.615850e-47 |
| Msa0245060 | Msa1363330 | 0.817537 | 3.131877e-52 | -8.615850e-47 |
| Msa0245060 | Msa1365860 | 0.804321 | 2.284898e-49 | -8.615850e-47 |
| Msa0245060 | Msa1369190 | 0.865042 | 7.863898e-65 | -8.615850e-47 |
| Msa0245060 | Msa1386600 | 0.817420 | 3.328071e-52 | -8.615850e-47 |
| Msa0245060 | Msa1397940 | 0.800856 | 1.184250e-48 | -8.615850e-47 |
| Msa0245060 | Msa1408150 | 0.810177 | 1.312464e-50 | -8.615850e-47 |
| Msa0245060 | Msa1411950 | 0.817617 | 3.005510e-52 | -8.615850e-47 |
| Msa0245060 | Msa1413500 | 0.822953 | 1.797180e-53 | -8.615850e-47 |
| Msa0245060 | Msa1425670 | 0.808766 | 2.635826e-50 | -8.615850e-47 |
| Msa0245060 | Msa1426490 | 0.810276 | 1.249199e-50 | -8.615850e-47 |
| Msa0245060 | Msa1427560 | 0.817636 | 2.976173e-52 | -8.615850e-47 |
| Msa0245060 | Msa1435440 | 0.821175 | 4.642962e-53 | -8.615850e-47 |
| Msa0245060 | Msa1438050 | 0.832779 | 7.778471e-56 | -8.615850e-47 |
| Msa0245060 | Msa1442850 | 0.813814 | 2.115095e-51 | -8.615850e-47 |
| Msa0245060 | Msa1450280 | 0.825635 | 4.209665e-54 | -8.615850e-47 |
| Msa0245060 | Msa1456050 | 0.803701 | 3.074097e-49 | -8.615850e-47 |
| Msa0245060 | Msa1462860 | 0.845900 | 3.043483e-59 | -8.615850e-47 |
| Msa0245060 | Msa1465080 | 0.802670 | 5.025616e-49 | -8.615850e-47 |
| Msa0245060 | Msa1465260 | 0.802939 | 4.421122e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245060 | MtrunA17_Chr2g0299021 | 97.638 | 127 | 3 | 0 | 1 | 127 | 60 | 186 | 9.80e-90 | 258 |
| Msa0245060 | MtrunA17_Chr5g0404751 | 51.261 | 119 | 56 | 1 | 1 | 117 | 8 | 126 | 1.19e-40 | 131 |
| Msa0245060 | MtrunA17_Chr3g0117411 | 47.059 | 85 | 45 | 0 | 33 | 117 | 27 | 111 | 2.25e-24 | 90.1 |
| Msa0245060 | MtrunA17_Chr7g0228311 | 44.828 | 87 | 48 | 0 | 31 | 117 | 10 | 96 | 7.78e-24 | 88.6 |
| Msa0245060 | MtrunA17_Chr1g0182971 | 40.426 | 94 | 55 | 1 | 25 | 117 | 84 | 177 | 1.99e-22 | 87.0 |
| Msa0245060 | MtrunA17_Chr3g0117391 | 44.706 | 85 | 47 | 0 | 33 | 117 | 30 | 114 | 3.07e-22 | 85.1 |
| Msa0245060 | MtrunA17_Chr7g0268761 | 31.765 | 85 | 58 | 0 | 33 | 117 | 10 | 94 | 1.59e-12 | 59.3 |
| Msa0245060 | MtrunA17_Chr2g0286251 | 33.333 | 84 | 56 | 0 | 25 | 108 | 2 | 85 | 2.32e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245060 | AT5G20500.1 | 65.546 | 119 | 39 | 1 | 3 | 119 | 9 | 127 | 2.15e-54 | 167 |
| Msa0245060 | AT1G77370.1 | 59.615 | 104 | 42 | 0 | 15 | 118 | 25 | 128 | 5.60e-41 | 133 |
| Msa0245060 | AT1G77370.2 | 47.692 | 130 | 42 | 1 | 15 | 118 | 25 | 154 | 2.45e-35 | 119 |
| Msa0245060 | AT5G40370.1 | 47.126 | 87 | 46 | 0 | 31 | 117 | 10 | 96 | 1.17e-24 | 90.9 |
| Msa0245060 | AT2G20270.1 | 41.489 | 94 | 54 | 1 | 25 | 117 | 76 | 169 | 4.05e-22 | 86.7 |
| Msa0245060 | AT5G40370.2 | 48.235 | 85 | 44 | 0 | 33 | 117 | 37 | 121 | 5.47e-22 | 85.1 |
| Msa0245060 | AT5G63030.1 | 46.341 | 82 | 44 | 0 | 36 | 117 | 31 | 112 | 1.23e-21 | 83.6 |
| Msa0245060 | AT4G28730.1 | 42.553 | 94 | 53 | 1 | 25 | 117 | 71 | 164 | 2.64e-21 | 84.3 |
| Msa0245060 | AT2G20270.2 | 32.231 | 121 | 54 | 1 | 25 | 117 | 76 | 196 | 7.61e-18 | 75.9 |
| Msa0245060 | AT4G28730.2 | 42.857 | 70 | 39 | 1 | 25 | 93 | 71 | 140 | 9.33e-15 | 66.6 |
Find 38 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCGATCTTGTTGTTATTAA+TGG | 0.134862 | 2_2:+23989923 | None:intergenic |
| TTTAGCAATTTCTGTTTATT+TGG | 0.157992 | 2_2:-23989991 | Msa0245060:CDS |
| TTCAAAGATTCAGGATATTT+TGG | 0.189732 | 2_2:-23987692 | Msa0245060:CDS |
| GGACTTCTGGCTAAACTTCT+AGG | 0.320255 | 2_2:-23987469 | Msa0245060:CDS |
| CTTTAATTTATAAAATGTAA+TGG | 0.368814 | 2_2:-23987295 | Msa0245060:three_prime_UTR |
| AGATGATGGTTCAAAGATTC+AGG | 0.370963 | 2_2:-23987701 | Msa0245060:CDS |
| GAATGAGTCTTTACATATAA+AGG | 0.387545 | 2_2:-23987351 | Msa0245060:three_prime_UTR |
| AGCGTATGAGAGTGGACTTC+TGG | 0.389360 | 2_2:-23987482 | Msa0245060:CDS |
| TTTGAGGCGGATTATTGATA+AGG | 0.394901 | 2_2:-23987420 | Msa0245060:exon |
| TTGAGGCGGATTATTGATAA+GGG | 0.401259 | 2_2:-23987419 | Msa0245060:exon |
| ACATGCTTACATGGGTGATC+TGG | 0.441212 | 2_2:+23990192 | None:intergenic |
| TCATCAAGCTCCACAACATA+TGG | 0.443186 | 2_2:+23988274 | None:intergenic |
| GCTTCAGCAGCTCCATCTGT+TGG | 0.460837 | 2_2:-23989963 | Msa0245060:CDS |
| CTTACATGGGTGATCTGGTC+TGG | 0.483526 | 2_2:+23990197 | None:intergenic |
| GGTGATCTGGTCTGGTGAGT+TGG | 0.499774 | 2_2:+23990205 | None:intergenic |
| TACTTACGGACAATATGTCT+TGG | 0.504862 | 2_2:+23989893 | None:intergenic |
| AGTTGGAGATTGTGAATGAC+AGG | 0.509835 | 2_2:+23990222 | None:intergenic |
| ACAATATGTCTTGGAAAAGA+TGG | 0.515296 | 2_2:+23989902 | None:intergenic |
| TTCATCAATGGAAAACACCT+TGG | 0.519493 | 2_2:-23987634 | Msa0245060:CDS |
| GTGGATCATGATGATCTTTG+AGG | 0.530593 | 2_2:-23987436 | Msa0245060:exon |
| ATCAATGGAAAACACCTTGG+AGG | 0.531584 | 2_2:-23987631 | Msa0245060:CDS |
| AACAATGATGATGGTGATGA+TGG | 0.544654 | 2_2:-23990015 | Msa0245060:exon |
| AGATTGTGAATGACAGGATA+CGG | 0.551522 | 2_2:+23990228 | None:intergenic |
| TTTAATGGACATGTTCAGGT+AGG | 0.559622 | 2_2:-23987227 | Msa0245060:three_prime_UTR |
| TCAACAAACTCACCAACAGA+TGG | 0.585425 | 2_2:+23989951 | None:intergenic |
| AATGAAGGTAACAATGATGA+TGG | 0.593130 | 2_2:-23990024 | Msa0245060:intron |
| AAACACCTTGGAGGATCAGA+TGG | 0.593775 | 2_2:-23987622 | Msa0245060:intron |
| ACTGTTGAAGCGTATGAGAG+TGG | 0.601661 | 2_2:-23987490 | Msa0245060:CDS |
| GCTCCACAACATATGGCACT+TGG | 0.613899 | 2_2:+23988281 | None:intergenic |
| TGAGGCGGATTATTGATAAG+GGG | 0.619154 | 2_2:-23987418 | Msa0245060:three_prime_UTR |
| TTTCCATTGATGAAAACTTG+TGG | 0.628530 | 2_2:+23987643 | None:intergenic |
| GATCATGATGATCTTTGAGG+CGG | 0.632486 | 2_2:-23987433 | Msa0245060:exon |
| TCAAAGATCATCATGATCCA+CGG | 0.634824 | 2_2:+23987438 | None:intergenic |
| GAACCAAGTGCCATATGTTG+TGG | 0.634853 | 2_2:-23988284 | Msa0245060:CDS |
| ACTTACCATCTGATCCTCCA+AGG | 0.638772 | 2_2:+23987617 | None:intergenic |
| AAGTAGCTGGAAAACTAACA+TGG | 0.655102 | 2_2:+23987251 | None:intergenic |
| GTTGTGGAGCTTGATGAGAG+AGG | 0.664144 | 2_2:-23988268 | Msa0245060:intron |
| ACTTCTAGGAATTGAGACCG+TGG | 0.695991 | 2_2:-23987455 | Msa0245060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTAGAATTTCAAA+TGG | - | chr2_2:23988488-23988507 | Msa0245060:intron | 10.0% |
| !!! | CTTTAATTTATAAAATGTAA+TGG | - | chr2_2:23990174-23990193 | Msa0245060:intron | 10.0% |
| !! | TAAAATGAAAAACAAAATGA+TGG | + | chr2_2:23987366-23987385 | None:intergenic | 15.0% |
| !!! | TAACATGCATTTTATAAAAT+GGG | + | chr2_2:23988467-23988486 | None:intergenic | 15.0% |
| !!! | TTTCAACATTTTTATTTTAG+GGG | + | chr2_2:23988914-23988933 | None:intergenic | 15.0% |
| !!! | GTTTCAACATTTTTATTTTA+GGG | + | chr2_2:23988915-23988934 | None:intergenic | 15.0% |
| !!! | AGTTTCAACATTTTTATTTT+AGG | + | chr2_2:23988916-23988935 | None:intergenic | 15.0% |
| !! | TACGTATTATATAAATAATG+TGG | - | chr2_2:23989363-23989382 | Msa0245060:intron | 15.0% |
| !! | TTTAGCAATTTCTGTTTATT+TGG | - | chr2_2:23987478-23987497 | Msa0245060:CDS | 20.0% |
| !! | GTATAGTATGTAAATACTTA+CGG | + | chr2_2:23987593-23987612 | None:intergenic | 20.0% |
| !! | AAAAACTACAAAATCTCAAA+TGG | + | chr2_2:23988034-23988053 | None:intergenic | 20.0% |
| !! | TTCAAATTCTACTATGTTAT+AGG | - | chr2_2:23988088-23988107 | Msa0245060:intron | 20.0% |
| !!! | CTAACATGCATTTTATAAAA+TGG | + | chr2_2:23988468-23988487 | None:intergenic | 20.0% |
| !! | ATTGTAGGAATCAAAAAATT+TGG | - | chr2_2:23988680-23988699 | Msa0245060:intron | 20.0% |
| !!! | GTGATTTATTTTGTATTCAT+TGG | - | chr2_2:23989092-23989111 | Msa0245060:intron | 20.0% |
| !!! | GATTTCTTTGTTTTGAATAT+AGG | - | chr2_2:23989127-23989146 | Msa0245060:intron | 20.0% |
| !!! | GTTTCAGATTTTTTTTTAAC+AGG | - | chr2_2:23989318-23989337 | Msa0245060:intron | 20.0% |
| !!! | TTAACTTGATCTATTTCATT+AGG | - | chr2_2:23989431-23989450 | Msa0245060:intron | 20.0% |
| !! | TAATATCTTTGTAACAACAA+TGG | + | chr2_2:23989731-23989750 | None:intergenic | 20.0% |
| !!! | GAAGTGTCTTTTAACAAAAA+TGG | + | chr2_2:23987308-23987327 | None:intergenic | 25.0% |
| ! | TTTAGTTGACAAATTCCTAA+CGG | - | chr2_2:23987394-23987413 | Msa0245060:three_prime_UTR | 25.0% |
| ! | GACTCATTATATTGATAAGT+AGG | - | chr2_2:23987795-23987814 | Msa0245060:intron | 25.0% |
| ! | CCAAATAAAGAACAAAAAGA+GGG | + | chr2_2:23988295-23988314 | None:intergenic | 25.0% |
| !!! | CCTCTTTTTGTTCTTTATTT+GGG | - | chr2_2:23988293-23988312 | Msa0245060:CDS | 25.0% |
| ! | TTATATCTGTAAATGTTCTG+TGG | - | chr2_2:23988537-23988556 | Msa0245060:intron | 25.0% |
| !!! | TAAGTTTTGAATAGGATTGT+AGG | - | chr2_2:23988665-23988684 | Msa0245060:intron | 25.0% |
| ! | ACTTTGATTGTTTATTCATC+TGG | + | chr2_2:23988764-23988783 | None:intergenic | 25.0% |
| ! | AAAAATTGAAACTTTACAGC+AGG | - | chr2_2:23989051-23989070 | Msa0245060:intron | 25.0% |
| !! | TTTTCCTTTGATAGATGTTT+AGG | - | chr2_2:23989703-23989722 | Msa0245060:intron | 25.0% |
| ! | TTTCCTTTGATAGATGTTTA+GGG | - | chr2_2:23989704-23989723 | Msa0245060:intron | 25.0% |
| !! | TTCAAAGATTCAGGATATTT+TGG | - | chr2_2:23989777-23989796 | Msa0245060:intron | 25.0% |
| !!! | GATATTTTGGTTAATGTTGT+CGG | - | chr2_2:23989790-23989809 | Msa0245060:intron | 25.0% |
| !!! | ATATTTTGGTTAATGTTGTC+GGG | - | chr2_2:23989791-23989810 | Msa0245060:intron | 25.0% |
| !!! | ATGGTAAGTATTTTTTAGCT+AGG | - | chr2_2:23989866-23989885 | Msa0245060:intron | 25.0% |
| ! | GAATGAGTCTTTACATATAA+AGG | - | chr2_2:23990118-23990137 | Msa0245060:intron | 25.0% |
| !!! | TTTTCCAGCTACTTTTTTAA+TGG | - | chr2_2:23990227-23990246 | Msa0245060:five_prime_UTR | 25.0% |
| !!! | TTGTTTTTTCTTCACACGTT+TGG | - | chr2_2:23987331-23987350 | Msa0245060:three_prime_UTR | 30.0% |
| TTAGTTGACAAATTCCTAAC+GGG | - | chr2_2:23987395-23987414 | Msa0245060:three_prime_UTR | 30.0% | |
| AATGAAGGTAACAATGATGA+TGG | - | chr2_2:23987445-23987464 | Msa0245060:CDS | 30.0% | |
| ACAATATGTCTTGGAAAAGA+TGG | + | chr2_2:23987570-23987589 | None:intergenic | 30.0% | |
| ATAGTCAAAACTCAAAAGAG+GGG | + | chr2_2:23987618-23987637 | None:intergenic | 30.0% | |
| GATAGTCAAAACTCAAAAGA+GGG | + | chr2_2:23987619-23987638 | None:intergenic | 30.0% | |
| TGATAGTCAAAACTCAAAAG+AGG | + | chr2_2:23987620-23987639 | None:intergenic | 30.0% | |
| AAATGAACCACTATTGATAG+AGG | - | chr2_2:23987705-23987724 | Msa0245060:intron | 30.0% | |
| !!! | TCGTTATGTTTTTGAGATGT+AGG | - | chr2_2:23987881-23987900 | Msa0245060:intron | 30.0% |
| !!! | TTTTGAGATGTAGGCATAAT+TGG | - | chr2_2:23987890-23987909 | Msa0245060:intron | 30.0% |
| CTGCTAATGTAAAAAAACAC+CGG | + | chr2_2:23988155-23988174 | None:intergenic | 30.0% | |
| AACAGATAAATGTCGCTAAA+TGG | + | chr2_2:23988252-23988271 | None:intergenic | 30.0% | |
| ! | CCCTCTTTTTGTTCTTTATT+TGG | - | chr2_2:23988292-23988311 | Msa0245060:CDS | 30.0% |
| CCCAAATAAAGAACAAAAAG+AGG | + | chr2_2:23988296-23988315 | None:intergenic | 30.0% | |
| TATGTACATTAGTACTCAAG+TGG | - | chr2_2:23988376-23988395 | Msa0245060:intron | 30.0% | |
| ATGTACATTAGTACTCAAGT+GGG | - | chr2_2:23988377-23988396 | Msa0245060:intron | 30.0% | |
| TACAGATATAACCTATTGAG+TGG | + | chr2_2:23988528-23988547 | None:intergenic | 30.0% | |
| ! | TCTTCAAAGCTCTAATTGTT+TGG | - | chr2_2:23988562-23988581 | Msa0245060:intron | 30.0% |
| !! | TTGTTTGGTGTTTGGAAAAT+TGG | - | chr2_2:23988577-23988596 | Msa0245060:intron | 30.0% |
| ATTGGAATTCGATATATGCT+TGG | - | chr2_2:23988595-23988614 | Msa0245060:intron | 30.0% | |
| !!! | TGTCTGCTTAAGTTTTGAAT+AGG | - | chr2_2:23988657-23988676 | Msa0245060:intron | 30.0% |
| TTGATTGTTTATTCATCTGG+AGG | + | chr2_2:23988761-23988780 | None:intergenic | 30.0% | |
| TCAGAGAATCTAAACAATCA+AGG | - | chr2_2:23988815-23988834 | Msa0245060:intron | 30.0% | |
| CAGAGAATCTAAACAATCAA+GGG | - | chr2_2:23988816-23988835 | Msa0245060:intron | 30.0% | |
| AAAGGTAATGAGAGGAAAAA+AGG | + | chr2_2:23988952-23988971 | None:intergenic | 30.0% | |
| AGTTGACATTTATCAAAAGC+AGG | - | chr2_2:23989534-23989553 | Msa0245060:intron | 30.0% | |
| GTTGACATTTATCAAAAGCA+GGG | - | chr2_2:23989535-23989554 | Msa0245060:intron | 30.0% | |
| TTCCTTTGATAGATGTTTAG+GGG | - | chr2_2:23989705-23989724 | Msa0245060:intron | 30.0% | |
| TTTCCATTGATGAAAACTTG+TGG | + | chr2_2:23989829-23989848 | None:intergenic | 30.0% | |
| ATGTCCATTAAAAAAGTAGC+TGG | + | chr2_2:23990234-23990253 | None:intergenic | 30.0% | |
| !!! | CTTTTTTAATGGACATGTTC+AGG | - | chr2_2:23990238-23990257 | Msa0245060:five_prime_UTR | 30.0% |
| AGCTATTGTATTGAAAAACG+AGG | + | chr2_2:23990270-23990289 | None:intergenic | 30.0% | |
| AGATTGTGAATGACAGGATA+CGG | + | chr2_2:23987244-23987263 | None:intergenic | 35.0% | |
| ! | ATTCCTAACGGGATTTTTGT+TGG | - | chr2_2:23987406-23987425 | Msa0245060:three_prime_UTR | 35.0% |
| AGTTAAATCAGCGAGAATGA+AGG | - | chr2_2:23987430-23987449 | Msa0245060:exon | 35.0% | |
| !! | AACAATGATGATGGTGATGA+TGG | - | chr2_2:23987454-23987473 | Msa0245060:CDS | 35.0% |
| !! | GGCGATCTTGTTGTTATTAA+TGG | + | chr2_2:23987549-23987568 | None:intergenic | 35.0% |
| TACTTACGGACAATATGTCT+TGG | + | chr2_2:23987579-23987598 | None:intergenic | 35.0% | |
| TAGTCAAAACTCAAAAGAGG+GGG | + | chr2_2:23987617-23987636 | None:intergenic | 35.0% | |
| ! | TGGGCAATTACAGAGATTTT+AGG | + | chr2_2:23988448-23988467 | None:intergenic | 35.0% |
| !! | AGCTCTAATTGTTTGGTGTT+TGG | - | chr2_2:23988569-23988588 | Msa0245060:intron | 35.0% |
| AAAACTTAAGCAGACACTCA+AGG | + | chr2_2:23988653-23988672 | None:intergenic | 35.0% | |
| ! | TTTGGTACAAAGTGTTCAGT+TGG | - | chr2_2:23988698-23988717 | Msa0245060:intron | 35.0% |
| GACAAAAAAGAAGCTAAGGT+GGG | + | chr2_2:23988797-23988816 | None:intergenic | 35.0% | |
| TGACAAAAAAGAAGCTAAGG+TGG | + | chr2_2:23988798-23988817 | None:intergenic | 35.0% | |
| CTCTGACAAAAAAGAAGCTA+AGG | + | chr2_2:23988801-23988820 | None:intergenic | 35.0% | |
| !! | TTTTGGAAGGACATTTGGAT+CGG | + | chr2_2:23988866-23988885 | None:intergenic | 35.0% |
| !!! | CGTTATTTTGGAAGGACATT+TGG | + | chr2_2:23988871-23988890 | None:intergenic | 35.0% |
| CAGAAACAAAAGGTAATGAG+AGG | + | chr2_2:23988960-23988979 | None:intergenic | 35.0% | |
| !! | CTCTCATTACCTTTTGTTTC+TGG | - | chr2_2:23988958-23988977 | Msa0245060:intron | 35.0% |
| ! | AAAGTTAGCATCCCTTTTCT+CGG | - | chr2_2:23989558-23989577 | Msa0245060:intron | 35.0% |
| AAGCTTTCTTTCCGAGAAAA+GGG | + | chr2_2:23989572-23989591 | None:intergenic | 35.0% | |
| AACCATCATCTGCAATGAAA+AGG | + | chr2_2:23989759-23989778 | None:intergenic | 35.0% | |
| ! | AGATGATGGTTCAAAGATTC+AGG | - | chr2_2:23989768-23989787 | Msa0245060:intron | 35.0% |
| TTCATCAATGGAAAACACCT+TGG | - | chr2_2:23989835-23989854 | Msa0245060:intron | 35.0% | |
| GTCAATGAACAAGTGTTTGA+GGG | + | chr2_2:23989940-23989959 | None:intergenic | 35.0% | |
| AGTCAATGAACAAGTGTTTG+AGG | + | chr2_2:23989941-23989960 | None:intergenic | 35.0% | |
| TCAAAGATCATCATGATCCA+CGG | + | chr2_2:23990034-23990053 | None:intergenic | 35.0% | |
| !! | TTTGAGGCGGATTATTGATA+AGG | - | chr2_2:23990049-23990068 | Msa0245060:intron | 35.0% |
| !! | TTGAGGCGGATTATTGATAA+GGG | - | chr2_2:23990050-23990069 | Msa0245060:intron | 35.0% |
| AAGTAGCTGGAAAACTAACA+TGG | + | chr2_2:23990221-23990240 | None:intergenic | 35.0% | |
| ! | TTTAATGGACATGTTCAGGT+AGG | - | chr2_2:23990242-23990261 | Msa0245060:five_prime_UTR | 35.0% |
| AGTTGGAGATTGTGAATGAC+AGG | + | chr2_2:23987250-23987269 | None:intergenic | 40.0% | |
| TGGAAGAGACATGCTTACAT+GGG | + | chr2_2:23987288-23987307 | None:intergenic | 40.0% | |
| ATGGAAGAGACATGCTTACA+TGG | + | chr2_2:23987289-23987308 | None:intergenic | 40.0% | |
| CTACCAACAAAAATCCCGTT+AGG | + | chr2_2:23987412-23987431 | None:intergenic | 40.0% | |
| TCAACAAACTCACCAACAGA+TGG | + | chr2_2:23987521-23987540 | None:intergenic | 40.0% | |
| AGTCAAAACTCAAAAGAGGG+GGG | + | chr2_2:23987616-23987635 | None:intergenic | 40.0% | |
| GACGATGTAACATAACGTAG+TGG | - | chr2_2:23987667-23987686 | Msa0245060:CDS | 40.0% | |
| GTTTGTGCCTCTATCAATAG+TGG | + | chr2_2:23987715-23987734 | None:intergenic | 40.0% | |
| ! | GATAGAGGCACAAACACAAT+TGG | - | chr2_2:23987720-23987739 | Msa0245060:intron | 40.0% |
| ATTGAGTGGAGAAGAACACT+TGG | + | chr2_2:23988514-23988533 | None:intergenic | 40.0% | |
| AGTGTTCTTCTCCACTCAAT+AGG | - | chr2_2:23988514-23988533 | Msa0245060:intron | 40.0% | |
| !! | AGTGTTCAGTTGGCTTGTTA+TGG | - | chr2_2:23988708-23988727 | Msa0245060:intron | 40.0% |
| CATCTGGAGGTAAACATATC+TGG | + | chr2_2:23988748-23988767 | None:intergenic | 40.0% | |
| CAAGGGAATCCAATGTTTAG+CGG | - | chr2_2:23988833-23988852 | Msa0245060:intron | 40.0% | |
| TTTGGAAGGACATTTGGATC+GGG | + | chr2_2:23988865-23988884 | None:intergenic | 40.0% | |
| TAGGGGTAAATAGACTGTGA+CGG | + | chr2_2:23988897-23988916 | None:intergenic | 40.0% | |
| !!! | CATTACCTTTTGTTTCTGGC+TGG | - | chr2_2:23988962-23988981 | Msa0245060:intron | 40.0% |
| TCATCAAGCTCCACAACATA+TGG | + | chr2_2:23989198-23989217 | None:intergenic | 40.0% | |
| CAAGCTTTCTTTCCGAGAAA+AGG | + | chr2_2:23989573-23989592 | None:intergenic | 40.0% | |
| TTCTCGGAAAGAAAGCTTGT+TGG | - | chr2_2:23989574-23989593 | Msa0245060:intron | 40.0% | |
| ! | TCTCGGAAAGAAAGCTTGTT+GGG | - | chr2_2:23989575-23989594 | Msa0245060:intron | 40.0% |
| AACTGCCTAGTGTAGAGATA+GGG | - | chr2_2:23989651-23989670 | Msa0245060:intron | 40.0% | |
| AGTTTCCCTATCTCTACACT+AGG | + | chr2_2:23989659-23989678 | None:intergenic | 40.0% | |
| ! | GACCTTTTCATTGCAGATGA+TGG | - | chr2_2:23989754-23989773 | Msa0245060:intron | 40.0% |
| ! | GTGCCACAAGTTTTCATCAA+TGG | - | chr2_2:23989823-23989842 | Msa0245060:intron | 40.0% |
| ATCAATGGAAAACACCTTGG+AGG | - | chr2_2:23989838-23989857 | Msa0245060:intron | 40.0% | |
| TCATACGCTTCAACAGTTTC+TGG | + | chr2_2:23989976-23989995 | None:intergenic | 40.0% | |
| GTGGATCATGATGATCTTTG+AGG | - | chr2_2:23990033-23990052 | Msa0245060:intron | 40.0% | |
| ! | GATCATGATGATCTTTGAGG+CGG | - | chr2_2:23990036-23990055 | Msa0245060:intron | 40.0% |
| !! | TGAGGCGGATTATTGATAAG+GGG | - | chr2_2:23990051-23990070 | Msa0245060:intron | 40.0% |
| ACATGCTTACATGGGTGATC+TGG | + | chr2_2:23987280-23987299 | None:intergenic | 45.0% | |
| GTCAAAACTCAAAAGAGGGG+GGG | + | chr2_2:23987615-23987634 | None:intergenic | 45.0% | |
| GATGTTCTAGTGTAGCGTAG+TGG | - | chr2_2:23987820-23987839 | Msa0245060:intron | 45.0% | |
| TATGAAGCACGAACACCTCT+AGG | - | chr2_2:23988118-23988137 | Msa0245060:intron | 45.0% | |
| GTTGTGTCAGCTGTCTTTGT+CGG | - | chr2_2:23988190-23988209 | Msa0245060:intron | 45.0% | |
| CTGGAGGTAAACATATCTGG+AGG | + | chr2_2:23988745-23988764 | None:intergenic | 45.0% | |
| AAAAGAAGCTAAGGTGGGTG+AGG | + | chr2_2:23988792-23988811 | None:intergenic | 45.0% | |
| AGGGGTAAATAGACTGTGAC+GGG | + | chr2_2:23988896-23988915 | None:intergenic | 45.0% | |
| TGTAGCCAGCCAGAAACAAA+AGG | + | chr2_2:23988970-23988989 | None:intergenic | 45.0% | |
| GAACCAAGTGCCATATGTTG+TGG | - | chr2_2:23989185-23989204 | Msa0245060:intron | 45.0% | |
| TTACACACACACACACACAC+AGG | - | chr2_2:23989253-23989272 | Msa0245060:intron | 45.0% | |
| TACACACACACACACACACA+GGG | - | chr2_2:23989254-23989273 | Msa0245060:intron | 45.0% | |
| !! | CTCGGAAAGAAAGCTTGTTG+GGG | - | chr2_2:23989576-23989595 | Msa0245060:intron | 45.0% |
| !! | TCGGAAAGAAAGCTTGTTGG+GGG | - | chr2_2:23989577-23989596 | Msa0245060:intron | 45.0% |
| CAACTGCCTAGTGTAGAGAT+AGG | - | chr2_2:23989650-23989669 | Msa0245060:intron | 45.0% | |
| GGCCCCTAAACATCTATCAA+AGG | + | chr2_2:23989710-23989729 | None:intergenic | 45.0% | |
| AAACACCTTGGAGGATCAGA+TGG | - | chr2_2:23989847-23989866 | Msa0245060:intron | 45.0% | |
| ACTTACCATCTGATCCTCCA+AGG | + | chr2_2:23989855-23989874 | None:intergenic | 45.0% | |
| ACTGTTGAAGCGTATGAGAG+TGG | - | chr2_2:23989979-23989998 | Msa0245060:CDS | 45.0% | |
| ! | GGACTTCTGGCTAAACTTCT+AGG | - | chr2_2:23990000-23990019 | Msa0245060:CDS | 45.0% |
| ! | ACTTCTAGGAATTGAGACCG+TGG | - | chr2_2:23990014-23990033 | Msa0245060:CDS | 45.0% |
| CTTACATGGGTGATCTGGTC+TGG | + | chr2_2:23987275-23987294 | None:intergenic | 50.0% | |
| GTTCTAGTGTAGCGTAGTGG+AGG | - | chr2_2:23987823-23987842 | Msa0245060:intron | 50.0% | |
| !!! | GACGGGGACGTTATTTTGGA+AGG | + | chr2_2:23988879-23988898 | None:intergenic | 50.0% |
| !! | CTGTGACGGGGACGTTATTT+TGG | + | chr2_2:23988883-23988902 | None:intergenic | 50.0% |
| GGGGTAAATAGACTGTGACG+GGG | + | chr2_2:23988895-23988914 | None:intergenic | 50.0% | |
| GCTCCACAACATATGGCACT+TGG | + | chr2_2:23989191-23989210 | None:intergenic | 50.0% | |
| GTTGTGGAGCTTGATGAGAG+AGG | - | chr2_2:23989201-23989220 | Msa0245060:intron | 50.0% | |
| ! | AGCGTATGAGAGTGGACTTC+TGG | - | chr2_2:23989987-23990006 | Msa0245060:CDS | 50.0% |
| GGTGATCTGGTCTGGTGAGT+TGG | + | chr2_2:23987267-23987286 | None:intergenic | 55.0% | |
| GCTTCAGCAGCTCCATCTGT+TGG | - | chr2_2:23987506-23987525 | Msa0245060:intron | 55.0% | |
| !! | GCACGAACACCTCTAGGATC+AGG | - | chr2_2:23988124-23988143 | Msa0245060:intron | 55.0% |
| ACGCTAAGCCCTGTGAAGCA+CGG | + | chr2_2:23988219-23988238 | None:intergenic | 55.0% | |
| GGGAACGAGCCGCTAAACAT+TGG | + | chr2_2:23988845-23988864 | None:intergenic | 55.0% | |
| !! | CCTCTAGGATCAGGCGTGTC+CGG | - | chr2_2:23988133-23988152 | Msa0245060:intron | 60.0% |
| TGTCGGAGTCCGTGCTTCAC+AGG | - | chr2_2:23988207-23988226 | Msa0245060:intron | 60.0% | |
| GTCGGAGTCCGTGCTTCACA+GGG | - | chr2_2:23988208-23988227 | Msa0245060:intron | 60.0% | |
| CCGGACACGCCTGATCCTAG+AGG | + | chr2_2:23988136-23988155 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 23987185 | 23990306 | 23987185 | ID=Msa0245060;Name=Msa0245060 |
| chr2_2 | mRNA | 23987185 | 23990306 | 23987185 | ID=Msa0245060-mRNA-1;Parent=Msa0245060;Name=Msa0245060-mRNA-1;_AED=0.07;_eAED=0.07;_QI=111|0.75|0.8|1|0.75|0.6|5|253|127 |
| chr2_2 | exon | 23987185 | 23987514 | 23987185 | ID=Msa0245060-mRNA-1:exon:9264;Parent=Msa0245060-mRNA-1 |
| chr2_2 | exon | 23987623 | 23987721 | 23987623 | ID=Msa0245060-mRNA-1:exon:9263;Parent=Msa0245060-mRNA-1 |
| chr2_2 | exon | 23988269 | 23988342 | 23988269 | ID=Msa0245060-mRNA-1:exon:9262;Parent=Msa0245060-mRNA-1 |
| chr2_2 | exon | 23989900 | 23990039 | 23989900 | ID=Msa0245060-mRNA-1:exon:9261;Parent=Msa0245060-mRNA-1 |
| chr2_2 | exon | 23990202 | 23990306 | 23990202 | ID=Msa0245060-mRNA-1:exon:9260;Parent=Msa0245060-mRNA-1 |
| chr2_2 | five_prime_UTR | 23990202 | 23990306 | 23990202 | ID=Msa0245060-mRNA-1:five_prime_utr;Parent=Msa0245060-mRNA-1 |
| chr2_2 | five_prime_UTR | 23990034 | 23990039 | 23990034 | ID=Msa0245060-mRNA-1:five_prime_utr;Parent=Msa0245060-mRNA-1 |
| chr2_2 | CDS | 23989900 | 23990033 | 23989900 | ID=Msa0245060-mRNA-1:cds;Parent=Msa0245060-mRNA-1 |
| chr2_2 | CDS | 23988269 | 23988342 | 23988269 | ID=Msa0245060-mRNA-1:cds;Parent=Msa0245060-mRNA-1 |
| chr2_2 | CDS | 23987623 | 23987721 | 23987623 | ID=Msa0245060-mRNA-1:cds;Parent=Msa0245060-mRNA-1 |
| chr2_2 | CDS | 23987438 | 23987514 | 23987438 | ID=Msa0245060-mRNA-1:cds;Parent=Msa0245060-mRNA-1 |
| chr2_2 | three_prime_UTR | 23987185 | 23987437 | 23987185 | ID=Msa0245060-mRNA-1:three_prime_utr;Parent=Msa0245060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
