Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729200 | XP_013442308.1 | 96.460 | 113 | 4 | 0 | 1 | 113 | 1 | 113 | 6.74e-67 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729200 | sp|O24415|RLA2B_MAIZE | 66.372 | 113 | 38 | 0 | 1 | 113 | 1 | 113 | 2.40e-33 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729200 | B7FMX7 | 96.460 | 113 | 4 | 0 | 1 | 113 | 1 | 113 | 3.22e-67 | 207 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0729200 | 0.868397 | 6.732185e-66 | -8.615850e-47 |
| Msa0002790 | Msa0729200 | 0.895818 | 6.677074e-76 | -8.615850e-47 |
| Msa0003870 | Msa0729200 | 0.806011 | 1.011896e-49 | -8.615850e-47 |
| Msa0007850 | Msa0729200 | 0.840116 | 1.055527e-57 | -8.615850e-47 |
| Msa0019390 | Msa0729200 | 0.815132 | 1.081262e-51 | -8.615850e-47 |
| Msa0022970 | Msa0729200 | 0.866592 | 2.547408e-65 | -8.615850e-47 |
| Msa0027260 | Msa0729200 | 0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa0029180 | Msa0729200 | 0.802798 | 4.728215e-49 | -8.615850e-47 |
| Msa0029260 | Msa0729200 | 0.824810 | 6.598454e-54 | -8.615850e-47 |
| Msa0031510 | Msa0729200 | 0.819289 | 1.255778e-52 | -8.615850e-47 |
| Msa0032810 | Msa0729200 | 0.878413 | 2.864996e-69 | -8.615850e-47 |
| Msa0033880 | Msa0729200 | 0.844413 | 7.677984e-59 | -8.615850e-47 |
| Msa0042280 | Msa0729200 | 0.831788 | 1.368440e-55 | -8.615850e-47 |
| Msa0045730 | Msa0729200 | 0.892663 | 1.289974e-74 | -8.615850e-47 |
| Msa0047160 | Msa0729200 | 0.842263 | 2.876491e-58 | -8.615850e-47 |
| Msa0048180 | Msa0729200 | 0.852572 | 4.228342e-61 | -8.615850e-47 |
| Msa0049690 | Msa0729200 | 0.811996 | 5.294194e-51 | -8.615850e-47 |
| Msa0056270 | Msa0729200 | 0.815205 | 1.041611e-51 | -8.615850e-47 |
| Msa0068020 | Msa0729200 | 0.824145 | 9.460901e-54 | -8.615850e-47 |
| Msa0074030 | Msa0729200 | 0.850193 | 1.989648e-60 | -8.615850e-47 |
| Msa0076040 | Msa0729200 | 0.830780 | 2.421231e-55 | -8.615850e-47 |
| Msa0077010 | Msa0729200 | 0.852235 | 5.271760e-61 | -8.615850e-47 |
| Msa0077530 | Msa0729200 | 0.805006 | 1.644114e-49 | -8.615850e-47 |
| Msa0086750 | Msa0729200 | 0.804885 | 1.742641e-49 | -8.615850e-47 |
| Msa0094470 | Msa0729200 | 0.813510 | 2.468291e-51 | -8.615850e-47 |
| Msa0097600 | Msa0729200 | 0.821476 | 3.957307e-53 | -8.615850e-47 |
| Msa0113240 | Msa0729200 | 0.823136 | 1.629600e-53 | -8.615850e-47 |
| Msa0116130 | Msa0729200 | 0.901167 | 3.523961e-78 | -8.615850e-47 |
| Msa0116670 | Msa0729200 | 0.907419 | 5.174897e-81 | -8.615850e-47 |
| Msa0118710 | Msa0729200 | 0.882933 | 6.869360e-71 | -8.615850e-47 |
| Msa0603320 | Msa0729200 | 0.846038 | 2.791319e-59 | -8.615850e-47 |
| Msa0604960 | Msa0729200 | 0.832055 | 1.175693e-55 | -8.615850e-47 |
| Msa0609000 | Msa0729200 | 0.831811 | 1.350928e-55 | -8.615850e-47 |
| Msa0610390 | Msa0729200 | 0.839232 | 1.792443e-57 | -8.615850e-47 |
| Msa0612390 | Msa0729200 | 0.801872 | 7.334036e-49 | -8.615850e-47 |
| Msa0615580 | Msa0729200 | 0.904062 | 1.816079e-79 | -8.615850e-47 |
| Msa0617540 | Msa0729200 | 0.811806 | 5.823964e-51 | -8.615850e-47 |
| Msa0618930 | Msa0729200 | 0.825451 | 4.653128e-54 | -8.615850e-47 |
| Msa0619860 | Msa0729200 | 0.824510 | 7.763599e-54 | -8.615850e-47 |
| Msa0622750 | Msa0729200 | 0.845359 | 4.266591e-59 | -8.615850e-47 |
| Msa0623200 | Msa0729200 | 0.894790 | 1.770039e-75 | -8.615850e-47 |
| Msa0625570 | Msa0729200 | 0.814218 | 1.723545e-51 | -8.615850e-47 |
| Msa0631250 | Msa0729200 | 0.835301 | 1.817405e-56 | -8.615850e-47 |
| Msa0633570 | Msa0729200 | 0.847136 | 1.399607e-59 | -8.615850e-47 |
| Msa0650920 | Msa0729200 | 0.821009 | 5.071378e-53 | -8.615850e-47 |
| Msa0654870 | Msa0729200 | 0.849420 | 3.271922e-60 | -8.615850e-47 |
| Msa0656410 | Msa0729200 | 0.818502 | 1.895318e-52 | -8.615850e-47 |
| Msa0659030 | Msa0729200 | 0.810291 | 1.240296e-50 | -8.615850e-47 |
| Msa0661300 | Msa0729200 | 0.809343 | 1.983060e-50 | -8.615850e-47 |
| Msa0666230 | Msa0729200 | 0.891043 | 5.692121e-74 | -8.615850e-47 |
| Msa0672100 | Msa0729200 | 0.837931 | 3.885210e-57 | -8.615850e-47 |
| Msa0684160 | Msa0729200 | 0.815736 | 7.934056e-52 | -8.615850e-47 |
| Msa0698780 | Msa0729200 | 0.829530 | 4.889325e-55 | -8.615850e-47 |
| Msa0699190 | Msa0729200 | 0.825039 | 5.824270e-54 | -8.615850e-47 |
| Msa0705000 | Msa0729200 | 0.840456 | 8.602637e-58 | -8.615850e-47 |
| Msa0705040 | Msa0729200 | 0.839708 | 1.348343e-57 | -8.615850e-47 |
| Msa0705800 | Msa0729200 | 0.851626 | 7.852072e-61 | -8.615850e-47 |
| Msa0706500 | Msa0729200 | 0.836648 | 8.271360e-57 | -8.615850e-47 |
| Msa0709280 | Msa0729200 | 0.817736 | 2.824719e-52 | -8.615850e-47 |
| Msa0712610 | Msa0729200 | 0.901941 | 1.608610e-78 | -8.615850e-47 |
| Msa0717380 | Msa0729200 | 0.835312 | 1.805465e-56 | -8.615850e-47 |
| Msa0719420 | Msa0729200 | 0.855691 | 5.321509e-62 | -8.615850e-47 |
| Msa0729200 | Msa0738100 | 0.854453 | 1.218334e-61 | -8.615850e-47 |
| Msa0729200 | Msa0752910 | 0.838219 | 3.274911e-57 | -8.615850e-47 |
| Msa0729200 | Msa0753140 | 0.825102 | 5.627401e-54 | -8.615850e-47 |
| Msa0729200 | Msa0766080 | 0.870265 | 1.663302e-66 | -8.615850e-47 |
| Msa0729200 | Msa0769590 | 0.998666 | 2.831011e-272 | -8.615850e-47 |
| Msa0729200 | Msa0781080 | 0.849351 | 3.418522e-60 | -8.615850e-47 |
| Msa0729200 | Msa0783630 | 0.864369 | 1.277721e-64 | -8.615850e-47 |
| Msa0729200 | Msa0785130 | 0.921783 | 2.296554e-88 | -8.615850e-47 |
| Msa0729200 | Msa0789680 | 0.853354 | 2.526242e-61 | -8.615850e-47 |
| Msa0729200 | Msa0792420 | 0.821342 | 4.248299e-53 | -8.615850e-47 |
| Msa0729200 | Msa0802410 | 0.835010 | 2.152312e-56 | -8.615850e-47 |
| Msa0729200 | Msa0805500 | 0.809353 | 1.973215e-50 | -8.615850e-47 |
| Msa0729200 | Msa0806880 | 0.986018 | 2.093971e-165 | -8.615850e-47 |
| Msa0729200 | Msa0808800 | 0.809512 | 1.824047e-50 | -8.615850e-47 |
| Msa0729200 | Msa0817540 | 0.895046 | 1.390156e-75 | -8.615850e-47 |
| Msa0729200 | Msa0819210 | 0.817388 | 3.384967e-52 | -8.615850e-47 |
| Msa0729200 | Msa0827380 | 0.841078 | 5.909499e-58 | -8.615850e-47 |
| Msa0729200 | Msa0844220 | -0.802220 | 6.221253e-49 | -8.615850e-47 |
| Msa0729200 | Msa0867060 | 0.800062 | 1.718481e-48 | -8.615850e-47 |
| Msa0729200 | Msa0876170 | 0.873234 | 1.721350e-67 | -8.615850e-47 |
| Msa0729200 | Msa0880730 | 0.807153 | 5.808229e-50 | -8.615850e-47 |
| Msa0729200 | Msa0881290 | 0.814579 | 1.433865e-51 | -8.615850e-47 |
| Msa0729200 | Msa0888810 | 0.902531 | 8.817967e-79 | -8.615850e-47 |
| Msa0729200 | Msa0913240 | 0.847365 | 1.210928e-59 | -8.615850e-47 |
| Msa0729200 | Msa0915540 | 0.827529 | 1.487992e-54 | -8.615850e-47 |
| Msa0729200 | Msa0925770 | 0.803891 | 2.806886e-49 | -8.615850e-47 |
| Msa0729200 | Msa0933300 | 0.808068 | 3.713254e-50 | -8.615850e-47 |
| Msa0729200 | Msa0943170 | 0.811151 | 8.081534e-51 | -8.615850e-47 |
| Msa0729200 | Msa0945480 | 0.902431 | 9.762404e-79 | -8.615850e-47 |
| Msa0729200 | Msa0960830 | 0.836033 | 1.186320e-56 | -8.615850e-47 |
| Msa0729200 | Msa0963020 | 0.836862 | 7.298405e-57 | -8.615850e-47 |
| Msa0729200 | Msa0968440 | 0.832834 | 7.541070e-56 | -8.615850e-47 |
| Msa0729200 | Msa0970110 | 0.829432 | 5.165616e-55 | -8.615850e-47 |
| Msa0729200 | Msa0994290 | 0.813958 | 1.966159e-51 | -8.615850e-47 |
| Msa0729200 | Msa1006840 | 0.814336 | 1.622810e-51 | -8.615850e-47 |
| Msa0729200 | Msa1019240 | 0.889290 | 2.765171e-73 | -8.615850e-47 |
| Msa0729200 | Msa1019260 | 0.882465 | 1.018436e-70 | -8.615850e-47 |
| Msa0729200 | Msa1021120 | 0.813149 | 2.961624e-51 | -8.615850e-47 |
| Msa0729200 | Msa1025940 | 0.819691 | 1.017006e-52 | -8.615850e-47 |
| Msa0729200 | Msa1037290 | 0.811711 | 6.106235e-51 | -8.615850e-47 |
| Msa0729200 | Msa1039520 | 0.876423 | 1.412688e-68 | -8.615850e-47 |
| Msa0729200 | Msa1043630 | 0.810949 | 8.936328e-51 | -8.615850e-47 |
| Msa0729200 | Msa1048690 | 0.827357 | 1.635611e-54 | -8.615850e-47 |
| Msa0729200 | Msa1070390 | 0.834283 | 3.277734e-56 | -8.615850e-47 |
| Msa0729200 | Msa1072710 | 0.935346 | 9.803298e-97 | -8.615850e-47 |
| Msa0729200 | Msa1078870 | 0.825594 | 4.304697e-54 | -8.615850e-47 |
| Msa0729200 | Msa1080350 | 0.863744 | 1.999914e-64 | -8.615850e-47 |
| Msa0729200 | Msa1085470 | 0.809929 | 1.484206e-50 | -8.615850e-47 |
| Msa0729200 | Msa1088490 | 0.896774 | 2.671603e-76 | -8.615850e-47 |
| Msa0729200 | Msa1094380 | 0.849238 | 3.676196e-60 | -8.615850e-47 |
| Msa0729200 | Msa1100710 | 0.814987 | 1.164545e-51 | -8.615850e-47 |
| Msa0729200 | Msa1104140 | 0.831687 | 1.449023e-55 | -8.615850e-47 |
| Msa0729200 | Msa1104210 | 0.876864 | 9.944618e-69 | -8.615850e-47 |
| Msa0729200 | Msa1115620 | 0.800869 | 1.176891e-48 | -8.615850e-47 |
| Msa0729200 | Msa1122820 | 0.826259 | 2.992271e-54 | -8.615850e-47 |
| Msa0729200 | Msa1123830 | 0.801193 | 1.010411e-48 | -8.615850e-47 |
| Msa0729200 | Msa1125500 | 0.831967 | 1.235982e-55 | -8.615850e-47 |
| Msa0729200 | Msa1125580 | 0.806500 | 7.983573e-50 | -8.615850e-47 |
| Msa0729200 | Msa1125860 | 0.862111 | 6.386727e-64 | -8.615850e-47 |
| Msa0729200 | Msa1126060 | 0.859574 | 3.763693e-63 | -8.615850e-47 |
| Msa0729200 | Msa1126470 | 0.847333 | 1.235883e-59 | -8.615850e-47 |
| Msa0729200 | Msa1126510 | 0.817004 | 4.128439e-52 | -8.615850e-47 |
| Msa0729200 | Msa1126520 | 0.826632 | 2.438728e-54 | -8.615850e-47 |
| Msa0729200 | Msa1126830 | 0.841232 | 5.384774e-58 | -8.615850e-47 |
| Msa0729200 | Msa1126850 | 0.808147 | 3.572605e-50 | -8.615850e-47 |
| Msa0729200 | Msa1131170 | 0.806853 | 6.721449e-50 | -8.615850e-47 |
| Msa0729200 | Msa1131560 | 0.803109 | 4.077768e-49 | -8.615850e-47 |
| Msa0729200 | Msa1135890 | 0.820017 | 8.563596e-53 | -8.615850e-47 |
| Msa0729200 | Msa1138870 | 0.840522 | 8.264457e-58 | -8.615850e-47 |
| Msa0729200 | Msa1165780 | 0.882449 | 1.032516e-70 | -8.615850e-47 |
| Msa0729200 | Msa1166860 | 0.823242 | 1.538944e-53 | -8.615850e-47 |
| Msa0729200 | Msa1166870 | 0.902922 | 5.902047e-79 | -8.615850e-47 |
| Msa0729200 | Msa1179950 | 0.802115 | 6.538253e-49 | -8.615850e-47 |
| Msa0729200 | Msa1179980 | 0.825984 | 3.478411e-54 | -8.615850e-47 |
| Msa0729200 | Msa1183450 | 0.808487 | 3.023429e-50 | -8.615850e-47 |
| Msa0729200 | Msa1184370 | 0.803596 | 3.232507e-49 | -8.615850e-47 |
| Msa0729200 | Msa1186980 | 0.823297 | 1.494326e-53 | -8.615850e-47 |
| Msa0729200 | Msa1195300 | 0.839473 | 1.551343e-57 | -8.615850e-47 |
| Msa0729200 | Msa1201830 | 0.813380 | 2.636215e-51 | -8.615850e-47 |
| Msa0729200 | Msa1202580 | 0.834937 | 2.245321e-56 | -8.615850e-47 |
| Msa0729200 | Msa1208020 | 0.860876 | 1.521006e-63 | -8.615850e-47 |
| Msa0729200 | Msa1211770 | 0.807539 | 4.812171e-50 | -8.615850e-47 |
| Msa0729200 | Msa1215820 | 0.864917 | 8.608057e-65 | -8.615850e-47 |
| Msa0729200 | Msa1218500 | 0.807660 | 4.535976e-50 | -8.615850e-47 |
| Msa0729200 | Msa1227690 | 0.840777 | 7.088229e-58 | -8.615850e-47 |
| Msa0729200 | Msa1230580 | 0.830867 | 2.305165e-55 | -8.615850e-47 |
| Msa0729200 | Msa1241190 | 0.862207 | 5.969100e-64 | -8.615850e-47 |
| Msa0729200 | Msa1256770 | 0.807435 | 5.060912e-50 | -8.615850e-47 |
| Msa0729200 | Msa1256840 | 0.818080 | 2.361908e-52 | -8.615850e-47 |
| Msa0729200 | Msa1257510 | 0.828589 | 8.266247e-55 | -8.615850e-47 |
| Msa0729200 | Msa1260530 | 0.850239 | 1.931367e-60 | -8.615850e-47 |
| Msa0729200 | Msa1262890 | 0.837832 | 4.117747e-57 | -8.615850e-47 |
| Msa0729200 | Msa1265630 | 0.840415 | 8.816313e-58 | -8.615850e-47 |
| Msa0729200 | Msa1270620 | 0.828962 | 6.715440e-55 | -8.615850e-47 |
| Msa0729200 | Msa1270690 | 0.824410 | 8.193601e-54 | -8.615850e-47 |
| Msa0729200 | Msa1294840 | 0.805843 | 1.097353e-49 | -8.615850e-47 |
| Msa0729200 | Msa1299590 | 0.812602 | 3.904345e-51 | -8.615850e-47 |
| Msa0729200 | Msa1305050 | 0.819288 | 1.256458e-52 | -8.615850e-47 |
| Msa0729200 | Msa1316680 | 0.838712 | 2.443156e-57 | -8.615850e-47 |
| Msa0729200 | Msa1321790 | 0.812633 | 3.842920e-51 | -8.615850e-47 |
| Msa0729200 | Msa1329300 | 0.857056 | 2.116035e-62 | -8.615850e-47 |
| Msa0729200 | Msa1329540 | 0.805273 | 1.445609e-49 | -8.615850e-47 |
| Msa0729200 | Msa1331250 | 0.836229 | 1.057568e-56 | -8.615850e-47 |
| Msa0729200 | Msa1331710 | 0.894950 | 1.521256e-75 | -8.615850e-47 |
| Msa0729200 | Msa1332250 | 0.844929 | 5.573830e-59 | -8.615850e-47 |
| Msa0729200 | Msa1338190 | 0.855849 | 4.786794e-62 | -8.615850e-47 |
| Msa0729200 | Msa1343260 | 0.830685 | 2.555265e-55 | -8.615850e-47 |
| Msa0729200 | Msa1343290 | 0.806157 | 9.427384e-50 | -8.615850e-47 |
| Msa0729200 | Msa1344950 | 0.810269 | 1.253556e-50 | -8.615850e-47 |
| Msa0729200 | Msa1349570 | 0.936484 | 1.612463e-97 | -8.615850e-47 |
| Msa0729200 | Msa1351540 | 0.828654 | 7.973897e-55 | -8.615850e-47 |
| Msa0729200 | Msa1355700 | 0.809173 | 2.156235e-50 | -8.615850e-47 |
| Msa0729200 | Msa1356790 | 0.902484 | 9.248476e-79 | -8.615850e-47 |
| Msa0729200 | Msa1362790 | 0.885538 | 7.458931e-72 | -8.615850e-47 |
| Msa0729200 | Msa1363330 | 0.880345 | 5.924398e-70 | -8.615850e-47 |
| Msa0729200 | Msa1363860 | 0.801599 | 8.345099e-49 | -8.615850e-47 |
| Msa0729200 | Msa1366180 | 0.874043 | 9.190841e-68 | -8.615850e-47 |
| Msa0729200 | Msa1368920 | 0.809201 | 2.127015e-50 | -8.615850e-47 |
| Msa0729200 | Msa1369190 | 0.931520 | 3.347429e-94 | -8.615850e-47 |
| Msa0729200 | Msa1374170 | 0.802027 | 6.815724e-49 | -8.615850e-47 |
| Msa0729200 | Msa1374240 | 0.857953 | 1.148181e-62 | -8.615850e-47 |
| Msa0729200 | Msa1379760 | 0.846625 | 1.931626e-59 | -8.615850e-47 |
| Msa0729200 | Msa1382670 | 0.807278 | 5.465510e-50 | -8.615850e-47 |
| Msa0729200 | Msa1386600 | 0.880226 | 6.536971e-70 | -8.615850e-47 |
| Msa0729200 | Msa1387410 | 0.891923 | 2.547576e-74 | -8.615850e-47 |
| Msa0729200 | Msa1392590 | 0.844829 | 5.933812e-59 | -8.615850e-47 |
| Msa0729200 | Msa1397100 | 0.810410 | 1.168710e-50 | -8.615850e-47 |
| Msa0729200 | Msa1403910 | 0.839415 | 1.606038e-57 | -8.615850e-47 |
| Msa0729200 | Msa1406080 | 0.853086 | 3.015365e-61 | -8.615850e-47 |
| Msa0729200 | Msa1413260 | 0.829056 | 6.370738e-55 | -8.615850e-47 |
| Msa0729200 | Msa1413500 | 0.981922 | 8.783176e-154 | -8.615850e-47 |
| Msa0729200 | Msa1418770 | 0.811717 | 6.087003e-51 | -8.615850e-47 |
| Msa0729200 | Msa1425670 | 0.839992 | 1.136744e-57 | -8.615850e-47 |
| Msa0729200 | Msa1426120 | 0.836308 | 1.009572e-56 | -8.615850e-47 |
| Msa0729200 | Msa1426370 | 0.926164 | 6.823951e-91 | -8.615850e-47 |
| Msa0729200 | Msa1426490 | 0.931280 | 4.766955e-94 | -8.615850e-47 |
| Msa0729200 | Msa1427560 | 0.908810 | 1.137150e-81 | -8.615850e-47 |
| Msa0729200 | Msa1433310 | 0.818357 | 2.044372e-52 | -8.615850e-47 |
| Msa0729200 | Msa1437280 | 0.818890 | 1.547738e-52 | -8.615850e-47 |
| Msa0729200 | Msa1448690 | 0.845820 | 3.199940e-59 | -8.615850e-47 |
| Msa0729200 | Msa1450280 | 0.889108 | 3.252431e-73 | -8.615850e-47 |
| Msa0729200 | Msa1455950 | 0.814851 | 1.247933e-51 | -8.615850e-47 |
| Msa0729200 | Msa1456050 | 0.864927 | 8.547330e-65 | -8.615850e-47 |
| Msa0729200 | Msa1462860 | 0.868496 | 6.252391e-66 | -8.615850e-47 |
| Msa0729200 | Msa1465260 | 0.871311 | 7.526632e-67 | -8.615850e-47 |
| Msa0126520 | Msa0729200 | 0.815000 | 1.156777e-51 | -8.615850e-47 |
| Msa0126840 | Msa0729200 | 0.841895 | 3.599398e-58 | -8.615850e-47 |
| Msa0127040 | Msa0729200 | 0.802661 | 5.047157e-49 | -8.615850e-47 |
| Msa0127850 | Msa0729200 | 0.833308 | 5.745035e-56 | -8.615850e-47 |
| Msa0128860 | Msa0729200 | 0.842247 | 2.905484e-58 | -8.615850e-47 |
| Msa0129660 | Msa0729200 | 0.801102 | 1.054686e-48 | -8.615850e-47 |
| Msa0133540 | Msa0729200 | 0.869561 | 2.824510e-66 | -8.615850e-47 |
| Msa0138890 | Msa0729200 | 0.836317 | 1.004375e-56 | -8.615850e-47 |
| Msa0146420 | Msa0729200 | 0.811647 | 6.305857e-51 | -8.615850e-47 |
| Msa0163760 | Msa0729200 | 0.849793 | 2.573384e-60 | -8.615850e-47 |
| Msa0165950 | Msa0729200 | 0.843767 | 1.144197e-58 | -8.615850e-47 |
| Msa0166750 | Msa0729200 | 0.834555 | 2.800761e-56 | -8.615850e-47 |
| Msa0167480 | Msa0729200 | 0.876120 | 1.797569e-68 | -8.615850e-47 |
| Msa0169300 | Msa0729200 | 0.821148 | 4.709110e-53 | -8.615850e-47 |
| Msa0171940 | Msa0729200 | 0.814445 | 1.534772e-51 | -8.615850e-47 |
| Msa0173530 | Msa0729200 | 0.905164 | 5.729988e-80 | -8.615850e-47 |
| Msa0174000 | Msa0729200 | 0.838281 | 3.157188e-57 | -8.615850e-47 |
| Msa0174730 | Msa0729200 | 0.838951 | 2.119586e-57 | -8.615850e-47 |
| Msa0179030 | Msa0729200 | 0.813371 | 2.648137e-51 | -8.615850e-47 |
| Msa0180020 | Msa0729200 | 0.855504 | 6.036454e-62 | -8.615850e-47 |
| Msa0181490 | Msa0729200 | 0.865457 | 5.823331e-65 | -8.615850e-47 |
| Msa0181610 | Msa0729200 | 0.833549 | 5.004368e-56 | -8.615850e-47 |
| Msa0187930 | Msa0729200 | 0.855723 | 5.209704e-62 | -8.615850e-47 |
| Msa0188350 | Msa0729200 | 0.824895 | 6.297653e-54 | -8.615850e-47 |
| Msa0189700 | Msa0729200 | 0.813498 | 2.482551e-51 | -8.615850e-47 |
| Msa0194540 | Msa0729200 | 0.852472 | 4.515303e-61 | -8.615850e-47 |
| Msa0197980 | Msa0729200 | 0.813925 | 1.999757e-51 | -8.615850e-47 |
| Msa0199690 | Msa0729200 | 0.807136 | 5.855853e-50 | -8.615850e-47 |
| Msa0202020 | Msa0729200 | 0.812511 | 4.086724e-51 | -8.615850e-47 |
| Msa0210360 | Msa0729200 | 0.854826 | 9.501559e-62 | -8.615850e-47 |
| Msa0218720 | Msa0729200 | 0.801114 | 1.048885e-48 | -8.615850e-47 |
| Msa0218830 | Msa0729200 | 0.909237 | 7.108978e-82 | -8.615850e-47 |
| Msa0219120 | Msa0729200 | 0.890952 | 6.181122e-74 | -8.615850e-47 |
| Msa0221030 | Msa0729200 | 0.931635 | 2.819490e-94 | -8.615850e-47 |
| Msa0224560 | Msa0729200 | 0.849436 | 3.238371e-60 | -8.615850e-47 |
| Msa0225150 | Msa0729200 | 0.802742 | 4.856616e-49 | -8.615850e-47 |
| Msa0230490 | Msa0729200 | 0.852207 | 5.372738e-61 | -8.615850e-47 |
| Msa0230520 | Msa0729200 | 0.849170 | 3.839264e-60 | -8.615850e-47 |
| Msa0231100 | Msa0729200 | 0.883590 | 3.946085e-71 | -8.615850e-47 |
| Msa0231660 | Msa0729200 | 0.821434 | 4.045222e-53 | -8.615850e-47 |
| Msa0231710 | Msa0729200 | 0.824749 | 6.818610e-54 | -8.615850e-47 |
| Msa0232010 | Msa0729200 | 0.803022 | 4.250046e-49 | -8.615850e-47 |
| Msa0232080 | Msa0729200 | 0.804661 | 1.941008e-49 | -8.615850e-47 |
| Msa0384880 | Msa0729200 | 0.805321 | 1.412620e-49 | -8.615850e-47 |
| Msa0423750 | Msa0729200 | 0.838611 | 2.595230e-57 | -8.615850e-47 |
| Msa0443390 | Msa0729200 | 0.898958 | 3.184918e-77 | -8.615850e-47 |
| Msa0471880 | Msa0729200 | 0.802380 | 5.766944e-49 | -8.615850e-47 |
| Msa0481850 | Msa0729200 | 0.845322 | 4.364817e-59 | -8.615850e-47 |
| Msa0243140 | Msa0729200 | 0.832739 | 7.959603e-56 | -8.615850e-47 |
| Msa0244780 | Msa0729200 | 0.864599 | 1.082764e-64 | -8.615850e-47 |
| Msa0245060 | Msa0729200 | 0.824179 | 9.286415e-54 | -8.615850e-47 |
| Msa0245580 | Msa0729200 | 0.815746 | 7.892021e-52 | -8.615850e-47 |
| Msa0257450 | Msa0729200 | 0.828925 | 6.853611e-55 | -8.615850e-47 |
| Msa0258850 | Msa0729200 | 0.872801 | 2.405031e-67 | -8.615850e-47 |
| Msa0262480 | Msa0729200 | 0.912779 | 1.317162e-83 | -8.615850e-47 |
| Msa0266370 | Msa0729200 | 0.802072 | 6.673600e-49 | -8.615850e-47 |
| Msa0268130 | Msa0729200 | 0.839134 | 1.900134e-57 | -8.615850e-47 |
| Msa0269180 | Msa0729200 | 0.875687 | 2.532622e-68 | -8.615850e-47 |
| Msa0275360 | Msa0729200 | 0.800926 | 1.145727e-48 | -8.615850e-47 |
| Msa0280430 | Msa0729200 | 0.836402 | 9.559455e-57 | -8.615850e-47 |
| Msa0289580 | Msa0729200 | 0.865378 | 6.168166e-65 | -8.615850e-47 |
| Msa0289610 | Msa0729200 | 0.875231 | 3.627814e-68 | -8.615850e-47 |
| Msa0291520 | Msa0729200 | 0.814416 | 1.557577e-51 | -8.615850e-47 |
| Msa0296250 | Msa0729200 | 0.827812 | 1.272150e-54 | -8.615850e-47 |
| Msa0297830 | Msa0729200 | 0.854373 | 1.285500e-61 | -8.615850e-47 |
| Msa0298200 | Msa0729200 | 0.876978 | 9.084268e-69 | -8.615850e-47 |
| Msa0298990 | Msa0729200 | 0.844283 | 8.320873e-59 | -8.615850e-47 |
| Msa0300350 | Msa0729200 | 0.914590 | 1.603607e-84 | -8.615850e-47 |
| Msa0304590 | Msa0729200 | 0.825647 | 4.182189e-54 | -8.615850e-47 |
| Msa0304660 | Msa0729200 | 0.836779 | 7.659176e-57 | -8.615850e-47 |
| Msa0306690 | Msa0729200 | 0.884425 | 1.939521e-71 | -8.615850e-47 |
| Msa0310080 | Msa0729200 | 0.827267 | 1.719530e-54 | -8.615850e-47 |
| Msa0317910 | Msa0729200 | 0.837577 | 4.787673e-57 | -8.615850e-47 |
| Msa0327300 | Msa0729200 | 0.880768 | 4.179640e-70 | -8.615850e-47 |
| Msa0327330 | Msa0729200 | 0.835516 | 1.603332e-56 | -8.615850e-47 |
| Msa0331700 | Msa0729200 | 0.835943 | 1.249939e-56 | -8.615850e-47 |
| Msa0335840 | Msa0729200 | 0.859738 | 3.360067e-63 | -8.615850e-47 |
| Msa0336010 | Msa0729200 | 0.808678 | 2.751817e-50 | -8.615850e-47 |
| Msa0337670 | Msa0729200 | 0.844525 | 7.163031e-59 | -8.615850e-47 |
| Msa0348830 | Msa0729200 | 0.900183 | 9.451454e-78 | -8.615850e-47 |
| Msa0483110 | Msa0729200 | 0.846184 | 2.547600e-59 | -8.615850e-47 |
| Msa0490820 | Msa0729200 | 0.826377 | 2.805054e-54 | -8.615850e-47 |
| Msa0520660 | Msa0729200 | 0.802399 | 5.715498e-49 | -8.615850e-47 |
| Msa0526540 | Msa0729200 | 0.884012 | 2.758027e-71 | -8.615850e-47 |
| Msa0527150 | Msa0729200 | 0.854266 | 1.380464e-61 | -8.615850e-47 |
| Msa0531650 | Msa0729200 | 0.877679 | 5.178575e-69 | -8.615850e-47 |
| Msa0534750 | Msa0729200 | 0.892737 | 1.204358e-74 | -8.615850e-47 |
| Msa0546030 | Msa0729200 | 0.819365 | 1.206821e-52 | -8.615850e-47 |
| Msa0550540 | Msa0729200 | 0.808821 | 2.565656e-50 | -8.615850e-47 |
| Msa0550570 | Msa0729200 | 0.818075 | 2.368570e-52 | -8.615850e-47 |
| Msa0561430 | Msa0729200 | 0.822766 | 1.986793e-53 | -8.615850e-47 |
| Msa0571920 | Msa0729200 | 0.849727 | 2.686291e-60 | -8.615850e-47 |
| Msa0576940 | Msa0729200 | 0.880601 | 4.799306e-70 | -8.615850e-47 |
| Msa0581070 | Msa0729200 | 0.805066 | 1.597224e-49 | -8.615850e-47 |
| Msa0581110 | Msa0729200 | 0.836310 | 1.008828e-56 | -8.615850e-47 |
| Msa0581280 | Msa0729200 | 0.804967 | 1.675053e-49 | -8.615850e-47 |
| Msa0584030 | Msa0729200 | 0.844188 | 8.827029e-59 | -8.615850e-47 |
| Msa0584260 | Msa0729200 | 0.808721 | 2.694445e-50 | -8.615850e-47 |
| Msa0586420 | Msa0729200 | 0.814574 | 1.437517e-51 | -8.615850e-47 |
| Msa0588360 | Msa0729200 | 0.801971 | 7.001011e-49 | -8.615850e-47 |
| Msa0588630 | Msa0729200 | -0.828379 | 9.290514e-55 | -8.615850e-47 |
| Msa0590940 | Msa0729200 | 0.830077 | 3.598625e-55 | -8.615850e-47 |
| Msa0593700 | Msa0729200 | 0.843371 | 1.459733e-58 | -8.615850e-47 |
| Msa0596370 | Msa0729200 | 0.801030 | 1.091390e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729200 | MtrunA17_Chr5g0421491 | 96.460 | 113 | 4 | 0 | 1 | 113 | 1 | 113 | 6.20e-71 | 207 |
| Msa0729200 | MtrunA17_Chr2g0321121 | 89.381 | 113 | 12 | 0 | 1 | 113 | 1 | 113 | 9.65e-46 | 143 |
| Msa0729200 | MtrunA17_Chr1g0179001 | 73.451 | 113 | 29 | 1 | 1 | 113 | 1 | 112 | 3.51e-28 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729200 | AT2G27710.4 | 77.143 | 70 | 16 | 0 | 1 | 70 | 1 | 70 | 3.65e-32 | 108 |
| Msa0729200 | AT3G44590.1 | 65.487 | 113 | 37 | 2 | 1 | 113 | 1 | 111 | 7.91e-31 | 106 |
| Msa0729200 | AT3G44590.2 | 65.487 | 113 | 37 | 2 | 1 | 113 | 1 | 111 | 7.91e-31 | 106 |
| Msa0729200 | AT2G27720.1 | 66.087 | 115 | 37 | 1 | 1 | 113 | 1 | 115 | 4.88e-28 | 99.4 |
| Msa0729200 | AT2G27710.1 | 75.385 | 65 | 16 | 0 | 1 | 65 | 1 | 65 | 1.78e-25 | 92.8 |
| Msa0729200 | AT2G27710.2 | 75.385 | 65 | 16 | 0 | 1 | 65 | 1 | 65 | 1.78e-25 | 92.8 |
| Msa0729200 | AT2G27710.3 | 75.385 | 65 | 16 | 0 | 1 | 65 | 1 | 65 | 1.78e-25 | 92.8 |
| Msa0729200 | AT2G27720.3 | 59.843 | 127 | 37 | 2 | 1 | 113 | 1 | 127 | 1.89e-24 | 90.5 |
| Msa0729200 | AT3G28500.1 | 55.556 | 117 | 46 | 4 | 1 | 113 | 1 | 115 | 3.73e-24 | 89.4 |
| Msa0729200 | AT2G27720.2 | 57.692 | 130 | 38 | 2 | 1 | 113 | 1 | 130 | 3.11e-23 | 87.4 |
| Msa0729200 | AT2G27720.4 | 66.667 | 87 | 27 | 1 | 29 | 113 | 5 | 91 | 2.57e-14 | 63.5 |
| Msa0729200 | AT5G40040.1 | 57.018 | 114 | 48 | 1 | 1 | 113 | 1 | 114 | 9.12e-14 | 62.8 |
Find 48 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTATTTGTTGGCTGTTT+TGG | 0.077686 | 5_1:+35747779 | Msa0729200:CDS |
| TCAACTAATTTATATGATTA+GGG | 0.288176 | 5_1:-35747586 | None:intergenic |
| TCCTCCTTTGCTTCGGCAGC+TGG | 0.312544 | 5_1:-35748526 | None:intergenic |
| AAAATAAATTAACCAATAGT+AGG | 0.326036 | 5_1:-35748850 | None:intergenic |
| GTCAACTAATTTATATGATT+AGG | 0.326658 | 5_1:-35747587 | None:intergenic |
| TATTTCAACTAAACTCTAAC+AGG | 0.328700 | 5_1:-35748737 | None:intergenic |
| ACGCACTTGGCTGGTTAGAT+TGG | 0.338544 | 5_1:-35747671 | None:intergenic |
| TTTCTGCATTACATTGTTGC+TGG | 0.354590 | 5_1:+35748870 | Msa0729200:three_prime_UTR |
| AAAGTGTTTGACCCTACTAT+TGG | 0.358905 | 5_1:+35748838 | Msa0729200:three_prime_UTR |
| GCTGTGGCTGTTGCTGCTTC+CGG | 0.372107 | 5_1:+35748478 | Msa0729200:CDS |
| GGAAAAGAAGGTTGAAGAAA+AGG | 0.373370 | 5_1:+35748546 | Msa0729200:CDS |
| CGCACTTGGCTGGTTAGATT+GGG | 0.377739 | 5_1:-35747670 | None:intergenic |
| GATCATCGCAGCTTATTTGT+TGG | 0.413285 | 5_1:+35747770 | Msa0729200:CDS |
| TGGAAACACAGAAAAGATAA+AGG | 0.423221 | 5_1:+35747541 | Msa0729200:five_prime_UTR |
| GCTGTTGCTGCTTCCGGTGG+AGG | 0.434566 | 5_1:+35748484 | Msa0729200:CDS |
| ATTCTTATAAACGCGACATC+AGG | 0.454905 | 5_1:+35748916 | Msa0729200:three_prime_UTR |
| TGCTAGTGGCAGAGAGAAGT+TGG | 0.462166 | 5_1:+35748432 | Msa0729200:CDS |
| ACTTCTAACTGTCTAATGTA+AGG | 0.467863 | 5_1:-35748955 | None:intergenic |
| AGCAGCTGCAGCACCTCCAC+CGG | 0.469171 | 5_1:-35748497 | None:intergenic |
| CAACTCAACATTTGAGTCCT+CGG | 0.476762 | 5_1:-35748368 | None:intergenic |
| TAATCATATAAATTAGTTGA+CGG | 0.485864 | 5_1:+35747589 | Msa0729200:five_prime_UTR |
| ATCAAAACCATCCTCGCCTC+AGG | 0.486163 | 5_1:+35747831 | Msa0729200:CDS |
| TGCACCAGCTGCCGAAGCAA+AGG | 0.494374 | 5_1:+35748522 | Msa0729200:CDS |
| AAGTTGGCTTCAGTGCCATC+TGG | 0.501913 | 5_1:+35748448 | Msa0729200:CDS |
| GGGATTTAGCTTGTTCGACT+AGG | 0.506077 | 5_1:+35748679 | Msa0729200:CDS |
| GCCATCTGGTGGAGGTGCTG+TGG | 0.508789 | 5_1:+35748462 | Msa0729200:CDS |
| TTTGATATCATCAGCGGAAG+GGG | 0.519904 | 5_1:-35747814 | None:intergenic |
| AACAAAGAAACTTACATCAT+CGG | 0.541190 | 5_1:-35748575 | None:intergenic |
| GCTTCAGTGCCATCTGGTGG+AGG | 0.543882 | 5_1:+35748454 | Msa0729200:CDS |
| CGAAGCAAAGGAGGAAAAGA+AGG | 0.550592 | 5_1:+35748534 | Msa0729200:CDS |
| GTAAGAACCTGAGGCGAGGA+TGG | 0.551127 | 5_1:-35747838 | None:intergenic |
| TTGGCTTCAGTGCCATCTGG+TGG | 0.551596 | 5_1:+35748451 | Msa0729200:CDS |
| GTGGCTGTTGCTGCTTCCGG+TGG | 0.555914 | 5_1:+35748481 | Msa0729200:CDS |
| AAATAAATTAACCAATAGTA+GGG | 0.556583 | 5_1:-35748849 | None:intergenic |
| TTTGAGTGAAGTCAAGGGCA+AGG | 0.559487 | 5_1:+35748393 | Msa0729200:CDS |
| GTGAAGGTGAAGCTCTGAAA+CGG | 0.559557 | 5_1:-35747614 | None:intergenic |
| ATTTAGCTTGTTCGACTAGG+TGG | 0.566929 | 5_1:+35748682 | Msa0729200:exon |
| CTTATAAACGCGACATCAGG+AGG | 0.573200 | 5_1:+35748919 | Msa0729200:three_prime_UTR |
| GCAATGTGTTGCAATTGAAA+AGG | 0.578024 | 5_1:-35748806 | None:intergenic |
| ACCAGCTGCCGAAGCAAAGG+AGG | 0.585812 | 5_1:+35748525 | Msa0729200:CDS |
| GCGACCGCGATGTATGTTGA+AGG | 0.590529 | 5_1:-35747636 | None:intergenic |
| GCCACAGCACCTCCACCAGA+TGG | 0.592642 | 5_1:-35748463 | None:intergenic |
| TCTGCCACTAGCAATTAGCT+CGG | 0.640840 | 5_1:-35748422 | None:intergenic |
| TTTGCCGAGCTAATTGCTAG+TGG | 0.651963 | 5_1:+35748418 | Msa0729200:CDS |
| AGAGGTAAGAACCTGAGGCG+AGG | 0.656993 | 5_1:-35747842 | None:intergenic |
| TATAGTTGGAGTTGAAGCCG+AGG | 0.682665 | 5_1:+35748351 | Msa0729200:intron |
| GCGATGTATGTTGAAGGTGA+AGG | 0.708805 | 5_1:-35747630 | None:intergenic |
| TTCACCTTCAACATACATCG+CGG | 0.762337 | 5_1:+35747632 | Msa0729200:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGGTATAAAAATGAA+GGG | + | chr5_1:35747499-35747518 | Msa0729200:five_prime_UTR | 15.0% |
| !! | TCAACTAATTTATATGATTA+GGG | - | chr5_1:35747589-35747608 | None:intergenic | 15.0% |
| !! | TAATCATATAAATTAGTTGA+CGG | + | chr5_1:35747589-35747608 | Msa0729200:five_prime_UTR | 15.0% |
| !!! | TTCTTTGTTATTTTTATAGT+TGG | + | chr5_1:35748337-35748356 | Msa0729200:intron | 15.0% |
| !! | AAATAAATTAACCAATAGTA+GGG | - | chr5_1:35748852-35748871 | None:intergenic | 15.0% |
| !! | AAAATAAATTAACCAATAGT+AGG | - | chr5_1:35748853-35748872 | None:intergenic | 15.0% |
| !! | AAAAATGGTATAAAAATGAA+GGG | + | chr5_1:35747499-35747518 | Msa0729200:five_prime_UTR | 15.0% |
| !! | TCAACTAATTTATATGATTA+GGG | - | chr5_1:35747589-35747608 | None:intergenic | 15.0% |
| !! | TAATCATATAAATTAGTTGA+CGG | + | chr5_1:35747589-35747608 | Msa0729200:five_prime_UTR | 15.0% |
| !!! | TTCTTTGTTATTTTTATAGT+TGG | + | chr5_1:35748337-35748356 | Msa0729200:intron | 15.0% |
| !! | AAATAAATTAACCAATAGTA+GGG | - | chr5_1:35748852-35748871 | None:intergenic | 15.0% |
| !! | AAAATAAATTAACCAATAGT+AGG | - | chr5_1:35748853-35748872 | None:intergenic | 15.0% |
| !! | CAAAAATGGTATAAAAATGA+AGG | + | chr5_1:35747498-35747517 | Msa0729200:five_prime_UTR | 20.0% |
| !!! | TTTATATGATTAGGGTTTTT+GGG | - | chr5_1:35747581-35747600 | None:intergenic | 20.0% |
| !!! | ATTTATATGATTAGGGTTTT+TGG | - | chr5_1:35747582-35747601 | None:intergenic | 20.0% |
| !! | GTCAACTAATTTATATGATT+AGG | - | chr5_1:35747590-35747609 | None:intergenic | 20.0% |
| !! | TTGATTGTAATTGAATATAG+TGG | + | chr5_1:35747997-35748016 | Msa0729200:intron | 20.0% |
| !!! | TTTCTACATTGAATTGTTTT+CGG | + | chr5_1:35748113-35748132 | Msa0729200:intron | 20.0% |
| !! | ATCAAAATTCAATGTTTATC+AGG | - | chr5_1:35748189-35748208 | None:intergenic | 20.0% |
| !!! | AGTTACAAATTAGTTTTTGT+GGG | + | chr5_1:35748778-35748797 | Msa0729200:three_prime_UTR | 20.0% |
| !!! | ATAGATTTGAAGTTTTAATG+TGG | + | chr5_1:35748979-35748998 | Msa0729200:three_prime_UTR | 20.0% |
| !! | CAAAAATGGTATAAAAATGA+AGG | + | chr5_1:35747498-35747517 | Msa0729200:five_prime_UTR | 20.0% |
| !!! | TTTATATGATTAGGGTTTTT+GGG | - | chr5_1:35747581-35747600 | None:intergenic | 20.0% |
| !!! | ATTTATATGATTAGGGTTTT+TGG | - | chr5_1:35747582-35747601 | None:intergenic | 20.0% |
| !! | GTCAACTAATTTATATGATT+AGG | - | chr5_1:35747590-35747609 | None:intergenic | 20.0% |
| !! | TTGATTGTAATTGAATATAG+TGG | + | chr5_1:35747997-35748016 | Msa0729200:intron | 20.0% |
| !!! | TTTCTACATTGAATTGTTTT+CGG | + | chr5_1:35748113-35748132 | Msa0729200:intron | 20.0% |
| !! | ATCAAAATTCAATGTTTATC+AGG | - | chr5_1:35748189-35748208 | None:intergenic | 20.0% |
| !!! | AGTTACAAATTAGTTTTTGT+GGG | + | chr5_1:35748778-35748797 | Msa0729200:three_prime_UTR | 20.0% |
| ! | AAACATAACCAAAAAAAGAG+AGG | - | chr5_1:35747863-35747882 | None:intergenic | 25.0% |
| ! | GTTATGTAGTTGAATGAATT+AGG | + | chr5_1:35747973-35747992 | Msa0729200:intron | 25.0% |
| ! | AAACAAAAAATTGCAAAGAG+TGG | - | chr5_1:35748033-35748052 | None:intergenic | 25.0% |
| ! | GCTTCAATAATCAAAATCTA+CGG | - | chr5_1:35748167-35748186 | None:intergenic | 25.0% |
| !! | ATCCTTGACAAATCAATTTT+TGG | + | chr5_1:35748211-35748230 | Msa0729200:intron | 25.0% |
| ! | AACAAAGAAACTTACATCAT+CGG | - | chr5_1:35748578-35748597 | None:intergenic | 25.0% |
| ! | TATTTCAACTAAACTCTAAC+AGG | - | chr5_1:35748740-35748759 | None:intergenic | 25.0% |
| !!! | GAGTTACAAATTAGTTTTTG+TGG | + | chr5_1:35748777-35748796 | Msa0729200:three_prime_UTR | 25.0% |
| ! | AAACATAACCAAAAAAAGAG+AGG | - | chr5_1:35747863-35747882 | None:intergenic | 25.0% |
| ! | GTTATGTAGTTGAATGAATT+AGG | + | chr5_1:35747973-35747992 | Msa0729200:intron | 25.0% |
| ! | AAACAAAAAATTGCAAAGAG+TGG | - | chr5_1:35748033-35748052 | None:intergenic | 25.0% |
| ! | GCTTCAATAATCAAAATCTA+CGG | - | chr5_1:35748167-35748186 | None:intergenic | 25.0% |
| !! | ATCCTTGACAAATCAATTTT+TGG | + | chr5_1:35748211-35748230 | Msa0729200:intron | 25.0% |
| ! | AACAAAGAAACTTACATCAT+CGG | - | chr5_1:35748578-35748597 | None:intergenic | 25.0% |
| ! | TATTTCAACTAAACTCTAAC+AGG | - | chr5_1:35748740-35748759 | None:intergenic | 25.0% |
| !!! | GAGTTACAAATTAGTTTTTG+TGG | + | chr5_1:35748777-35748796 | Msa0729200:three_prime_UTR | 25.0% |
| AAAATGAAGGGCAAAAAACA+AGG | + | chr5_1:35747511-35747530 | Msa0729200:five_prime_UTR | 30.0% | |
| AAATGAAGGGCAAAAAACAA+GGG | + | chr5_1:35747512-35747531 | Msa0729200:five_prime_UTR | 30.0% | |
| TGGAAACACAGAAAAGATAA+AGG | + | chr5_1:35747541-35747560 | Msa0729200:five_prime_UTR | 30.0% | |
| !! | GACCAAAAATTGATTTGTCA+AGG | - | chr5_1:35748216-35748235 | None:intergenic | 30.0% |
| ! | AGGTGGTTTATTGTTCTTTT+TGG | + | chr5_1:35748699-35748718 | Msa0729200:exon | 30.0% |
| ACTTCTAACTGTCTAATGTA+AGG | - | chr5_1:35748958-35748977 | None:intergenic | 30.0% | |
| AAAATGAAGGGCAAAAAACA+AGG | + | chr5_1:35747511-35747530 | Msa0729200:five_prime_UTR | 30.0% | |
| AAATGAAGGGCAAAAAACAA+GGG | + | chr5_1:35747512-35747531 | Msa0729200:five_prime_UTR | 30.0% | |
| TGGAAACACAGAAAAGATAA+AGG | + | chr5_1:35747541-35747560 | Msa0729200:five_prime_UTR | 30.0% | |
| !! | GACCAAAAATTGATTTGTCA+AGG | - | chr5_1:35748216-35748235 | None:intergenic | 30.0% |
| ! | AGGTGGTTTATTGTTCTTTT+TGG | + | chr5_1:35748699-35748718 | Msa0729200:exon | 30.0% |
| ACTTCTAACTGTCTAATGTA+AGG | - | chr5_1:35748958-35748977 | None:intergenic | 30.0% | |
| !! | GCAAAAAACAAGGGTATTTC+TGG | + | chr5_1:35747521-35747540 | Msa0729200:five_prime_UTR | 35.0% |
| GAATGAAAAACATACGCACT+TGG | - | chr5_1:35747687-35747706 | None:intergenic | 35.0% | |
| !! | AGCTTATTTGTTGGCTGTTT+TGG | + | chr5_1:35747779-35747798 | Msa0729200:CDS | 35.0% |
| !! | GCTTATTTGTTGGCTGTTTT+GGG | + | chr5_1:35747780-35747799 | Msa0729200:CDS | 35.0% |
| ! | TTTTGATATCATCAGCGGAA+GGG | - | chr5_1:35747818-35747837 | None:intergenic | 35.0% |
| !!! | GATGGTTTTGATATCATCAG+CGG | - | chr5_1:35747823-35747842 | None:intergenic | 35.0% |
| !!! | GGTTCTTACCTCTCTTTTTT+TGG | + | chr5_1:35747852-35747871 | Msa0729200:intron | 35.0% |
| !! | TTGCTTTTGAGTGAAGTCAA+GGG | + | chr5_1:35748388-35748407 | Msa0729200:CDS | 35.0% |
| GGAAAAGAAGGTTGAAGAAA+AGG | + | chr5_1:35748546-35748565 | Msa0729200:CDS | 35.0% | |
| !!! | CATTGTCATCTTTGTTTTGC+AGG | + | chr5_1:35748652-35748671 | Msa0729200:intron | 35.0% |
| !!! | ATCTTTGTTTTGCAGGACAT+GGG | + | chr5_1:35748659-35748678 | Msa0729200:intron | 35.0% |
| GCAATGTGTTGCAATTGAAA+AGG | - | chr5_1:35748809-35748828 | None:intergenic | 35.0% | |
| ! | AAAGTGTTTGACCCTACTAT+TGG | + | chr5_1:35748838-35748857 | Msa0729200:three_prime_UTR | 35.0% |
| TTTCTGCATTACATTGTTGC+TGG | + | chr5_1:35748870-35748889 | Msa0729200:three_prime_UTR | 35.0% | |
| ATTCTTATAAACGCGACATC+AGG | + | chr5_1:35748916-35748935 | Msa0729200:three_prime_UTR | 35.0% | |
| !! | GCAAAAAACAAGGGTATTTC+TGG | + | chr5_1:35747521-35747540 | Msa0729200:five_prime_UTR | 35.0% |
| GAATGAAAAACATACGCACT+TGG | - | chr5_1:35747687-35747706 | None:intergenic | 35.0% | |
| !! | AGCTTATTTGTTGGCTGTTT+TGG | + | chr5_1:35747779-35747798 | Msa0729200:CDS | 35.0% |
| !! | GCTTATTTGTTGGCTGTTTT+GGG | + | chr5_1:35747780-35747799 | Msa0729200:CDS | 35.0% |
| ! | TTTTGATATCATCAGCGGAA+GGG | - | chr5_1:35747818-35747837 | None:intergenic | 35.0% |
| !!! | GATGGTTTTGATATCATCAG+CGG | - | chr5_1:35747823-35747842 | None:intergenic | 35.0% |
| !!! | GGTTCTTACCTCTCTTTTTT+TGG | + | chr5_1:35747852-35747871 | Msa0729200:intron | 35.0% |
| !! | TTGCTTTTGAGTGAAGTCAA+GGG | + | chr5_1:35748388-35748407 | Msa0729200:CDS | 35.0% |
| GGAAAAGAAGGTTGAAGAAA+AGG | + | chr5_1:35748546-35748565 | Msa0729200:CDS | 35.0% | |
| !!! | CATTGTCATCTTTGTTTTGC+AGG | + | chr5_1:35748652-35748671 | Msa0729200:intron | 35.0% |
| !!! | ATCTTTGTTTTGCAGGACAT+GGG | + | chr5_1:35748659-35748678 | Msa0729200:intron | 35.0% |
| GCAATGTGTTGCAATTGAAA+AGG | - | chr5_1:35748809-35748828 | None:intergenic | 35.0% | |
| ! | AAAGTGTTTGACCCTACTAT+TGG | + | chr5_1:35748838-35748857 | Msa0729200:three_prime_UTR | 35.0% |
| TTTCTGCATTACATTGTTGC+TGG | + | chr5_1:35748870-35748889 | Msa0729200:three_prime_UTR | 35.0% | |
| ATTCTTATAAACGCGACATC+AGG | + | chr5_1:35748916-35748935 | Msa0729200:three_prime_UTR | 35.0% | |
| !! | ATTAGGGTTTTTGGGAGCTT+GGG | - | chr5_1:35747573-35747592 | None:intergenic | 40.0% |
| TTCACCTTCAACATACATCG+CGG | + | chr5_1:35747632-35747651 | Msa0729200:five_prime_UTR | 40.0% | |
| CAACACGAATCAACAACGTA+CGG | - | chr5_1:35747721-35747740 | None:intergenic | 40.0% | |
| GATCATCGCAGCTTATTTGT+TGG | + | chr5_1:35747770-35747789 | Msa0729200:CDS | 40.0% | |
| !! | TATTTGTTGGCTGTTTTGGG+CGG | + | chr5_1:35747783-35747802 | Msa0729200:CDS | 40.0% |
| TTTGATATCATCAGCGGAAG+GGG | - | chr5_1:35747817-35747836 | None:intergenic | 40.0% | |
| !! | GTTTTGATATCATCAGCGGA+AGG | - | chr5_1:35747819-35747838 | None:intergenic | 40.0% |
| AAAAGAGAGGTAAGAACCTG+AGG | - | chr5_1:35747850-35747869 | None:intergenic | 40.0% | |
| CAACTCAACATTTGAGTCCT+CGG | - | chr5_1:35748371-35748390 | None:intergenic | 40.0% | |
| !!! | GTTGCTTTTGAGTGAAGTCA+AGG | + | chr5_1:35748387-35748406 | Msa0729200:CDS | 40.0% |
| ! | CTTCTTTTCCTCCTTTGCTT+CGG | - | chr5_1:35748536-35748555 | None:intergenic | 40.0% |
| !!! | CATCTTTGTTTTGCAGGACA+TGG | + | chr5_1:35748658-35748677 | Msa0729200:intron | 40.0% |
| !! | ATTTAGCTTGTTCGACTAGG+TGG | + | chr5_1:35748682-35748701 | Msa0729200:exon | 40.0% |
| !! | ATTAGGGTTTTTGGGAGCTT+GGG | - | chr5_1:35747573-35747592 | None:intergenic | 40.0% |
| TTCACCTTCAACATACATCG+CGG | + | chr5_1:35747632-35747651 | Msa0729200:five_prime_UTR | 40.0% | |
| CAACACGAATCAACAACGTA+CGG | - | chr5_1:35747721-35747740 | None:intergenic | 40.0% | |
| GATCATCGCAGCTTATTTGT+TGG | + | chr5_1:35747770-35747789 | Msa0729200:CDS | 40.0% | |
| !! | TATTTGTTGGCTGTTTTGGG+CGG | + | chr5_1:35747783-35747802 | Msa0729200:CDS | 40.0% |
| TTTGATATCATCAGCGGAAG+GGG | - | chr5_1:35747817-35747836 | None:intergenic | 40.0% | |
| !! | GTTTTGATATCATCAGCGGA+AGG | - | chr5_1:35747819-35747838 | None:intergenic | 40.0% |
| AAAAGAGAGGTAAGAACCTG+AGG | - | chr5_1:35747850-35747869 | None:intergenic | 40.0% | |
| CAACTCAACATTTGAGTCCT+CGG | - | chr5_1:35748371-35748390 | None:intergenic | 40.0% | |
| !!! | GTTGCTTTTGAGTGAAGTCA+AGG | + | chr5_1:35748387-35748406 | Msa0729200:CDS | 40.0% |
| ! | CTTCTTTTCCTCCTTTGCTT+CGG | - | chr5_1:35748536-35748555 | None:intergenic | 40.0% |
| !!! | CATCTTTGTTTTGCAGGACA+TGG | + | chr5_1:35748658-35748677 | Msa0729200:intron | 40.0% |
| !! | ATTTAGCTTGTTCGACTAGG+TGG | + | chr5_1:35748682-35748701 | Msa0729200:exon | 40.0% |
| !! | GATTAGGGTTTTTGGGAGCT+TGG | - | chr5_1:35747574-35747593 | None:intergenic | 45.0% |
| !! | GTGAAGGTGAAGCTCTGAAA+CGG | - | chr5_1:35747617-35747636 | None:intergenic | 45.0% |
| GCGATGTATGTTGAAGGTGA+AGG | - | chr5_1:35747633-35747652 | None:intergenic | 45.0% | |
| GAAAAACATACGCACTTGGC+TGG | - | chr5_1:35747683-35747702 | None:intergenic | 45.0% | |
| ! | GCTTTAGCTCACTTCTTCAG+AGG | - | chr5_1:35748245-35748264 | None:intergenic | 45.0% |
| TATAGTTGGAGTTGAAGCCG+AGG | + | chr5_1:35748351-35748370 | Msa0729200:intron | 45.0% | |
| TTTGAGTGAAGTCAAGGGCA+AGG | + | chr5_1:35748393-35748412 | Msa0729200:CDS | 45.0% | |
| TTTGCCGAGCTAATTGCTAG+TGG | + | chr5_1:35748418-35748437 | Msa0729200:CDS | 45.0% | |
| TCTGCCACTAGCAATTAGCT+CGG | - | chr5_1:35748425-35748444 | None:intergenic | 45.0% | |
| CGAAGCAAAGGAGGAAAAGA+AGG | + | chr5_1:35748534-35748553 | Msa0729200:CDS | 45.0% | |
| !! | GGGATTTAGCTTGTTCGACT+AGG | + | chr5_1:35748679-35748698 | Msa0729200:CDS | 45.0% |
| CTTATAAACGCGACATCAGG+AGG | + | chr5_1:35748919-35748938 | Msa0729200:three_prime_UTR | 45.0% | |
| !! | GATTAGGGTTTTTGGGAGCT+TGG | - | chr5_1:35747574-35747593 | None:intergenic | 45.0% |
| !! | GTGAAGGTGAAGCTCTGAAA+CGG | - | chr5_1:35747617-35747636 | None:intergenic | 45.0% |
| GCGATGTATGTTGAAGGTGA+AGG | - | chr5_1:35747633-35747652 | None:intergenic | 45.0% | |
| GAAAAACATACGCACTTGGC+TGG | - | chr5_1:35747683-35747702 | None:intergenic | 45.0% | |
| ! | GCTTTAGCTCACTTCTTCAG+AGG | - | chr5_1:35748245-35748264 | None:intergenic | 45.0% |
| TATAGTTGGAGTTGAAGCCG+AGG | + | chr5_1:35748351-35748370 | Msa0729200:intron | 45.0% | |
| TTTGAGTGAAGTCAAGGGCA+AGG | + | chr5_1:35748393-35748412 | Msa0729200:CDS | 45.0% | |
| TTTGCCGAGCTAATTGCTAG+TGG | + | chr5_1:35748418-35748437 | Msa0729200:CDS | 45.0% | |
| TCTGCCACTAGCAATTAGCT+CGG | - | chr5_1:35748425-35748444 | None:intergenic | 45.0% | |
| CGAAGCAAAGGAGGAAAAGA+AGG | + | chr5_1:35748534-35748553 | Msa0729200:CDS | 45.0% | |
| !! | GGGATTTAGCTTGTTCGACT+AGG | + | chr5_1:35748679-35748698 | Msa0729200:CDS | 45.0% |
| CTTATAAACGCGACATCAGG+AGG | + | chr5_1:35748919-35748938 | Msa0729200:three_prime_UTR | 45.0% | |
| !!! | TTATTTTTTTAAAACAAAAA+TGG | + | chr5_1:35747484-35747503 | Msa0729200:five_prime_UTR | 5.0% |
| !!! | TTATTTTTTTAAAACAAAAA+TGG | + | chr5_1:35747484-35747503 | Msa0729200:five_prime_UTR | 5.0% |
| !! | GTTTTTGGGAGCTTGGGTCT+GGG | - | chr5_1:35747567-35747586 | None:intergenic | 50.0% |
| ! | CGCACTTGGCTGGTTAGATT+GGG | - | chr5_1:35747673-35747692 | None:intergenic | 50.0% |
| ! | ACGCACTTGGCTGGTTAGAT+TGG | - | chr5_1:35747674-35747693 | None:intergenic | 50.0% |
| ATCAAAACCATCCTCGCCTC+AGG | + | chr5_1:35747831-35747850 | Msa0729200:CDS | 50.0% | |
| !!! | GTTTTCGGTGTCGATTTGCC+TGG | + | chr5_1:35748128-35748147 | Msa0729200:intron | 50.0% |
| !! | GGTGTCGATTTGCCTGGTAT+CGG | + | chr5_1:35748134-35748153 | Msa0729200:intron | 50.0% |
| TGCTAGTGGCAGAGAGAAGT+TGG | + | chr5_1:35748432-35748451 | Msa0729200:CDS | 50.0% | |
| ! | AAGTTGGCTTCAGTGCCATC+TGG | + | chr5_1:35748448-35748467 | Msa0729200:CDS | 50.0% |
| !! | GTTTTTGGGAGCTTGGGTCT+GGG | - | chr5_1:35747567-35747586 | None:intergenic | 50.0% |
| ! | CGCACTTGGCTGGTTAGATT+GGG | - | chr5_1:35747673-35747692 | None:intergenic | 50.0% |
| ! | ACGCACTTGGCTGGTTAGAT+TGG | - | chr5_1:35747674-35747693 | None:intergenic | 50.0% |
| ATCAAAACCATCCTCGCCTC+AGG | + | chr5_1:35747831-35747850 | Msa0729200:CDS | 50.0% | |
| !!! | GTTTTCGGTGTCGATTTGCC+TGG | + | chr5_1:35748128-35748147 | Msa0729200:intron | 50.0% |
| !! | GGTGTCGATTTGCCTGGTAT+CGG | + | chr5_1:35748134-35748153 | Msa0729200:intron | 50.0% |
| TGCTAGTGGCAGAGAGAAGT+TGG | + | chr5_1:35748432-35748451 | Msa0729200:CDS | 50.0% | |
| ! | AAGTTGGCTTCAGTGCCATC+TGG | + | chr5_1:35748448-35748467 | Msa0729200:CDS | 50.0% |
| !! | GGTTTTTGGGAGCTTGGGTC+TGG | - | chr5_1:35747568-35747587 | None:intergenic | 55.0% |
| GCGACCGCGATGTATGTTGA+AGG | - | chr5_1:35747639-35747658 | None:intergenic | 55.0% | |
| GTAAGAACCTGAGGCGAGGA+TGG | - | chr5_1:35747841-35747860 | None:intergenic | 55.0% | |
| AGAGGTAAGAACCTGAGGCG+AGG | - | chr5_1:35747845-35747864 | None:intergenic | 55.0% | |
| TACGGACAGACACCGATACC+AGG | - | chr5_1:35748149-35748168 | None:intergenic | 55.0% | |
| TTGGCTTCAGTGCCATCTGG+TGG | + | chr5_1:35748451-35748470 | Msa0729200:CDS | 55.0% | |
| !! | GGTTTTTGGGAGCTTGGGTC+TGG | - | chr5_1:35747568-35747587 | None:intergenic | 55.0% |
| GCGACCGCGATGTATGTTGA+AGG | - | chr5_1:35747639-35747658 | None:intergenic | 55.0% | |
| GTAAGAACCTGAGGCGAGGA+TGG | - | chr5_1:35747841-35747860 | None:intergenic | 55.0% | |
| AGAGGTAAGAACCTGAGGCG+AGG | - | chr5_1:35747845-35747864 | None:intergenic | 55.0% | |
| TACGGACAGACACCGATACC+AGG | - | chr5_1:35748149-35748168 | None:intergenic | 55.0% | |
| TTGGCTTCAGTGCCATCTGG+TGG | + | chr5_1:35748451-35748470 | Msa0729200:CDS | 55.0% | |
| GCTTCAGTGCCATCTGGTGG+AGG | + | chr5_1:35748454-35748473 | Msa0729200:CDS | 60.0% | |
| ! | GCTGTGGCTGTTGCTGCTTC+CGG | + | chr5_1:35748478-35748497 | Msa0729200:CDS | 60.0% |
| TGCACCAGCTGCCGAAGCAA+AGG | + | chr5_1:35748522-35748541 | Msa0729200:CDS | 60.0% | |
| ACCAGCTGCCGAAGCAAAGG+AGG | + | chr5_1:35748525-35748544 | Msa0729200:CDS | 60.0% | |
| TCCTCCTTTGCTTCGGCAGC+TGG | - | chr5_1:35748529-35748548 | None:intergenic | 60.0% | |
| GCTTCAGTGCCATCTGGTGG+AGG | + | chr5_1:35748454-35748473 | Msa0729200:CDS | 60.0% | |
| ! | GCTGTGGCTGTTGCTGCTTC+CGG | + | chr5_1:35748478-35748497 | Msa0729200:CDS | 60.0% |
| TGCACCAGCTGCCGAAGCAA+AGG | + | chr5_1:35748522-35748541 | Msa0729200:CDS | 60.0% | |
| ACCAGCTGCCGAAGCAAAGG+AGG | + | chr5_1:35748525-35748544 | Msa0729200:CDS | 60.0% | |
| TCCTCCTTTGCTTCGGCAGC+TGG | - | chr5_1:35748529-35748548 | None:intergenic | 60.0% | |
| !! | GCCATCTGGTGGAGGTGCTG+TGG | + | chr5_1:35748462-35748481 | Msa0729200:CDS | 65.0% |
| GCCACAGCACCTCCACCAGA+TGG | - | chr5_1:35748466-35748485 | None:intergenic | 65.0% | |
| ! | GTGGCTGTTGCTGCTTCCGG+TGG | + | chr5_1:35748481-35748500 | Msa0729200:CDS | 65.0% |
| ! | GCTGTTGCTGCTTCCGGTGG+AGG | + | chr5_1:35748484-35748503 | Msa0729200:CDS | 65.0% |
| AGCAGCTGCAGCACCTCCAC+CGG | - | chr5_1:35748500-35748519 | None:intergenic | 65.0% | |
| !! | GCCATCTGGTGGAGGTGCTG+TGG | + | chr5_1:35748462-35748481 | Msa0729200:CDS | 65.0% |
| GCCACAGCACCTCCACCAGA+TGG | - | chr5_1:35748466-35748485 | None:intergenic | 65.0% | |
| ! | GTGGCTGTTGCTGCTTCCGG+TGG | + | chr5_1:35748481-35748500 | Msa0729200:CDS | 65.0% |
| ! | GCTGTTGCTGCTTCCGGTGG+AGG | + | chr5_1:35748484-35748503 | Msa0729200:CDS | 65.0% |
| AGCAGCTGCAGCACCTCCAC+CGG | - | chr5_1:35748500-35748519 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 35747473 | 35749001 | 35747473 | ID=Msa0729200;Name=Msa0729200 |
| chr5_1 | mRNA | 35747473 | 35749001 | 35747473 | ID=Msa0729200-mRNA-1;Parent=Msa0729200;Name=Msa0729200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=217|1|1|1|1|1|4|301|113 |
| chr5_1 | exon | 35747473 | 35747687 | 35747473 | ID=Msa0729200-mRNA-1:exon:11034;Parent=Msa0729200-mRNA-1 |
| chr5_1 | exon | 35747763 | 35747852 | 35747763 | ID=Msa0729200-mRNA-1:exon:11035;Parent=Msa0729200-mRNA-1 |
| chr5_1 | exon | 35748356 | 35748582 | 35748356 | ID=Msa0729200-mRNA-1:exon:11036;Parent=Msa0729200-mRNA-1 |
| chr5_1 | exon | 35748674 | 35749001 | 35748674 | ID=Msa0729200-mRNA-1:exon:11037;Parent=Msa0729200-mRNA-1 |
| chr5_1 | five_prime_UTR | 35747473 | 35747687 | 35747473 | ID=Msa0729200-mRNA-1:five_prime_utr;Parent=Msa0729200-mRNA-1 |
| chr5_1 | five_prime_UTR | 35747763 | 35747764 | 35747763 | ID=Msa0729200-mRNA-1:five_prime_utr;Parent=Msa0729200-mRNA-1 |
| chr5_1 | CDS | 35747765 | 35747852 | 35747765 | ID=Msa0729200-mRNA-1:cds;Parent=Msa0729200-mRNA-1 |
| chr5_1 | CDS | 35748356 | 35748582 | 35748356 | ID=Msa0729200-mRNA-1:cds;Parent=Msa0729200-mRNA-1 |
| chr5_1 | CDS | 35748674 | 35748700 | 35748674 | ID=Msa0729200-mRNA-1:cds;Parent=Msa0729200-mRNA-1 |
| chr5_1 | three_prime_UTR | 35748701 | 35749001 | 35748701 | ID=Msa0729200-mRNA-1:three_prime_utr;Parent=Msa0729200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
