Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0945480 | XP_003606815.2 | 100.000 | 69 | 0 | 0 | 1 | 69 | 1 | 69 | 2.95e-41 | 139 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0945480 | sp|O22860|RL38_ARATH | 92.754 | 69 | 5 | 0 | 1 | 69 | 1 | 69 | 2.30e-41 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0945480 | 0.819124 | 1.369072e-52 | -8.615850e-47 |
| Msa0002790 | Msa0945480 | 0.844222 | 8.643405e-59 | -8.615850e-47 |
| Msa0022970 | Msa0945480 | 0.818541 | 1.857328e-52 | -8.615850e-47 |
| Msa0031510 | Msa0945480 | 0.808711 | 2.708157e-50 | -8.615850e-47 |
| Msa0032810 | Msa0945480 | 0.837788 | 4.226513e-57 | -8.615850e-47 |
| Msa0038980 | Msa0945480 | 0.804180 | 2.444365e-49 | -8.615850e-47 |
| Msa0045730 | Msa0945480 | 0.858181 | 9.823137e-63 | -8.615850e-47 |
| Msa0048180 | Msa0945480 | 0.817275 | 3.587425e-52 | -8.615850e-47 |
| Msa0049690 | Msa0945480 | 0.828502 | 8.674551e-55 | -8.615850e-47 |
| Msa0069440 | Msa0945480 | 0.803575 | 3.265144e-49 | -8.615850e-47 |
| Msa0074030 | Msa0945480 | 0.806424 | 8.281992e-50 | -8.615850e-47 |
| Msa0076040 | Msa0945480 | 0.828171 | 1.042796e-54 | -8.615850e-47 |
| Msa0077010 | Msa0945480 | 0.834229 | 3.381856e-56 | -8.615850e-47 |
| Msa0082280 | Msa0945480 | 0.809491 | 1.843457e-50 | -8.615850e-47 |
| Msa0113240 | Msa0945480 | 0.807000 | 6.259889e-50 | -8.615850e-47 |
| Msa0116130 | Msa0945480 | 0.877872 | 4.435087e-69 | -8.615850e-47 |
| Msa0116670 | Msa0945480 | 0.873203 | 1.763775e-67 | -8.615850e-47 |
| Msa0118710 | Msa0945480 | 0.823136 | 1.629600e-53 | -8.615850e-47 |
| Msa0603320 | Msa0945480 | 0.803418 | 3.519938e-49 | -8.615850e-47 |
| Msa0604960 | Msa0945480 | 0.883936 | 2.941073e-71 | -8.615850e-47 |
| Msa0610390 | Msa0945480 | 0.806415 | 8.319980e-50 | -8.615850e-47 |
| Msa0615580 | Msa0945480 | 0.852164 | 5.525523e-61 | -8.615850e-47 |
| Msa0617540 | Msa0945480 | 0.814709 | 1.342102e-51 | -8.615850e-47 |
| Msa0619860 | Msa0945480 | 0.804935 | 1.700899e-49 | -8.615850e-47 |
| Msa0622750 | Msa0945480 | 0.827471 | 1.536385e-54 | -8.615850e-47 |
| Msa0623200 | Msa0945480 | 0.862207 | 5.969100e-64 | -8.615850e-47 |
| Msa0625570 | Msa0945480 | 0.828818 | 7.274991e-55 | -8.615850e-47 |
| Msa0631250 | Msa0945480 | 0.811861 | 5.664408e-51 | -8.615850e-47 |
| Msa0633570 | Msa0945480 | 0.824747 | 6.827939e-54 | -8.615850e-47 |
| Msa0654870 | Msa0945480 | 0.813768 | 2.165539e-51 | -8.615850e-47 |
| Msa0659030 | Msa0945480 | 0.837352 | 5.466772e-57 | -8.615850e-47 |
| Msa0666230 | Msa0945480 | 0.860215 | 2.411908e-63 | -8.615850e-47 |
| Msa0683660 | Msa0945480 | 0.810972 | 8.836921e-51 | -8.615850e-47 |
| Msa0683780 | Msa0945480 | 0.816224 | 6.174976e-52 | -8.615850e-47 |
| Msa0687630 | Msa0945480 | 0.802795 | 4.734047e-49 | -8.615850e-47 |
| Msa0705000 | Msa0945480 | 0.855956 | 4.453930e-62 | -8.615850e-47 |
| Msa0705040 | Msa0945480 | 0.858130 | 1.017676e-62 | -8.615850e-47 |
| Msa0705800 | Msa0945480 | 0.850679 | 1.453075e-60 | -8.615850e-47 |
| Msa0706500 | Msa0945480 | 0.815307 | 9.886296e-52 | -8.615850e-47 |
| Msa0712610 | Msa0945480 | 0.921551 | 3.094503e-88 | -8.615850e-47 |
| Msa0717380 | Msa0945480 | 0.812422 | 4.274806e-51 | -8.615850e-47 |
| Msa0729200 | Msa0945480 | 0.902431 | 9.762404e-79 | -8.615850e-47 |
| Msa0738100 | Msa0945480 | 0.816753 | 4.701024e-52 | -8.615850e-47 |
| Msa0752910 | Msa0945480 | 0.847826 | 9.043532e-60 | -8.615850e-47 |
| Msa0766080 | Msa0945480 | 0.856824 | 2.477880e-62 | -8.615850e-47 |
| Msa0769590 | Msa0945480 | 0.899476 | 1.907769e-77 | -8.615850e-47 |
| Msa0781080 | Msa0945480 | 0.858596 | 7.392313e-63 | -8.615850e-47 |
| Msa0783630 | Msa0945480 | 0.803782 | 2.958267e-49 | -8.615850e-47 |
| Msa0785130 | Msa0945480 | 0.883117 | 5.882969e-71 | -8.615850e-47 |
| Msa0786660 | Msa0945480 | 0.809424 | 1.905290e-50 | -8.615850e-47 |
| Msa0792420 | Msa0945480 | 0.847077 | 1.452880e-59 | -8.615850e-47 |
| Msa0806880 | Msa0945480 | 0.886520 | 3.183401e-72 | -8.615850e-47 |
| Msa0817540 | Msa0945480 | 0.855674 | 5.384894e-62 | -8.615850e-47 |
| Msa0822580 | Msa0945480 | 0.806084 | 9.767127e-50 | -8.615850e-47 |
| Msa0827380 | Msa0945480 | 0.845622 | 3.620469e-59 | -8.615850e-47 |
| Msa0123010 | Msa0945480 | 0.840266 | 9.645852e-58 | -8.615850e-47 |
| Msa0126520 | Msa0945480 | 0.809876 | 1.523737e-50 | -8.615850e-47 |
| Msa0128860 | Msa0945480 | 0.812893 | 3.371378e-51 | -8.615850e-47 |
| Msa0133540 | Msa0945480 | 0.854589 | 1.112773e-61 | -8.615850e-47 |
| Msa0138890 | Msa0945480 | 0.851559 | 8.201333e-61 | -8.615850e-47 |
| Msa0163760 | Msa0945480 | 0.811226 | 7.782261e-51 | -8.615850e-47 |
| Msa0165950 | Msa0945480 | 0.808276 | 3.353059e-50 | -8.615850e-47 |
| Msa0166750 | Msa0945480 | 0.811199 | 7.890701e-51 | -8.615850e-47 |
| Msa0167480 | Msa0945480 | 0.865833 | 4.433777e-65 | -8.615850e-47 |
| Msa0173530 | Msa0945480 | 0.868359 | 6.923773e-66 | -8.615850e-47 |
| Msa0174730 | Msa0945480 | 0.809263 | 2.063200e-50 | -8.615850e-47 |
| Msa0174770 | Msa0945480 | 0.827506 | 1.506746e-54 | -8.615850e-47 |
| Msa0177360 | Msa0945480 | 0.814490 | 1.500505e-51 | -8.615850e-47 |
| Msa0181490 | Msa0945480 | 0.859055 | 5.386905e-63 | -8.615850e-47 |
| Msa0181610 | Msa0945480 | 0.852774 | 3.701259e-61 | -8.615850e-47 |
| Msa0187930 | Msa0945480 | 0.832760 | 7.863881e-56 | -8.615850e-47 |
| Msa0194540 | Msa0945480 | 0.824732 | 6.883921e-54 | -8.615850e-47 |
| Msa0197980 | Msa0945480 | 0.836763 | 7.731982e-57 | -8.615850e-47 |
| Msa0210360 | Msa0945480 | 0.825155 | 5.469810e-54 | -8.615850e-47 |
| Msa0218830 | Msa0945480 | 0.864445 | 1.210133e-64 | -8.615850e-47 |
| Msa0219120 | Msa0945480 | 0.892688 | 1.260298e-74 | -8.615850e-47 |
| Msa0221030 | Msa0945480 | 0.898843 | 3.565297e-77 | -8.615850e-47 |
| Msa0224560 | Msa0945480 | 0.876529 | 1.298702e-68 | -8.615850e-47 |
| Msa0225150 | Msa0945480 | 0.810027 | 1.413652e-50 | -8.615850e-47 |
| Msa0230490 | Msa0945480 | 0.813248 | 2.818172e-51 | -8.615850e-47 |
| Msa0230520 | Msa0945480 | 0.860636 | 1.798641e-63 | -8.615850e-47 |
| Msa0231100 | Msa0945480 | 0.819802 | 9.591923e-53 | -8.615850e-47 |
| Msa0231710 | Msa0945480 | 0.823959 | 1.045643e-53 | -8.615850e-47 |
| Msa0384880 | Msa0945480 | 0.800801 | 1.215632e-48 | -8.615850e-47 |
| Msa0423750 | Msa0945480 | 0.812054 | 5.142482e-51 | -8.615850e-47 |
| Msa0443390 | Msa0945480 | 0.877692 | 5.126424e-69 | -8.615850e-47 |
| Msa0471880 | Msa0945480 | 0.810644 | 1.040168e-50 | -8.615850e-47 |
| Msa0481850 | Msa0945480 | 0.872217 | 3.768777e-67 | -8.615850e-47 |
| Msa0244780 | Msa0945480 | 0.840598 | 7.897624e-58 | -8.615850e-47 |
| Msa0258850 | Msa0945480 | 0.865807 | 4.515764e-65 | -8.615850e-47 |
| Msa0262480 | Msa0945480 | 0.856414 | 3.268986e-62 | -8.615850e-47 |
| Msa0268130 | Msa0945480 | 0.820452 | 6.808394e-53 | -8.615850e-47 |
| Msa0269180 | Msa0945480 | 0.834611 | 2.712366e-56 | -8.615850e-47 |
| Msa0280430 | Msa0945480 | 0.821811 | 3.310985e-53 | -8.615850e-47 |
| Msa0289610 | Msa0945480 | 0.803095 | 4.104763e-49 | -8.615850e-47 |
| Msa0291520 | Msa0945480 | 0.811910 | 5.526598e-51 | -8.615850e-47 |
| Msa0296250 | Msa0945480 | 0.804374 | 2.227970e-49 | -8.615850e-47 |
| Msa0297830 | Msa0945480 | 0.841012 | 6.148231e-58 | -8.615850e-47 |
| Msa0298200 | Msa0945480 | 0.872718 | 2.564059e-67 | -8.615850e-47 |
| Msa0298990 | Msa0945480 | 0.825675 | 4.119229e-54 | -8.615850e-47 |
| Msa0300350 | Msa0945480 | 0.861515 | 9.717833e-64 | -8.615850e-47 |
| Msa0304590 | Msa0945480 | 0.822192 | 2.701123e-53 | -8.615850e-47 |
| Msa0304660 | Msa0945480 | 0.822185 | 2.712047e-53 | -8.615850e-47 |
| Msa0306690 | Msa0945480 | 0.868533 | 6.084885e-66 | -8.615850e-47 |
| Msa0310080 | Msa0945480 | 0.829914 | 3.942319e-55 | -8.615850e-47 |
| Msa0317910 | Msa0945480 | 0.812785 | 3.559613e-51 | -8.615850e-47 |
| Msa0327300 | Msa0945480 | 0.811386 | 7.184450e-51 | -8.615850e-47 |
| Msa0331700 | Msa0945480 | 0.825816 | 3.813906e-54 | -8.615850e-47 |
| Msa0335840 | Msa0945480 | 0.845413 | 4.124955e-59 | -8.615850e-47 |
| Msa0337670 | Msa0945480 | 0.802528 | 5.374279e-49 | -8.615850e-47 |
| Msa0348830 | Msa0945480 | 0.883932 | 2.950534e-71 | -8.615850e-47 |
| Msa0359040 | Msa0945480 | 0.821909 | 3.142083e-53 | -8.615850e-47 |
| Msa0483110 | Msa0945480 | 0.845916 | 3.013712e-59 | -8.615850e-47 |
| Msa0490820 | Msa0945480 | 0.820514 | 6.588533e-53 | -8.615850e-47 |
| Msa0526540 | Msa0945480 | 0.852145 | 5.594286e-61 | -8.615850e-47 |
| Msa0527150 | Msa0945480 | 0.836167 | 1.096394e-56 | -8.615850e-47 |
| Msa0531650 | Msa0945480 | 0.805636 | 1.213384e-49 | -8.615850e-47 |
| Msa0534750 | Msa0945480 | 0.872729 | 2.541776e-67 | -8.615850e-47 |
| Msa0546030 | Msa0945480 | 0.808584 | 2.882681e-50 | -8.615850e-47 |
| Msa0571920 | Msa0945480 | 0.836822 | 7.468924e-57 | -8.615850e-47 |
| Msa0573350 | Msa0945480 | 0.811495 | 6.805636e-51 | -8.615850e-47 |
| Msa0576940 | Msa0945480 | 0.863234 | 2.878547e-64 | -8.615850e-47 |
| Msa0581070 | Msa0945480 | 0.810827 | 9.496213e-51 | -8.615850e-47 |
| Msa0584030 | Msa0945480 | 0.816394 | 5.657259e-52 | -8.615850e-47 |
| Msa0588630 | Msa0945480 | -0.831478 | 1.631496e-55 | -8.615850e-47 |
| Msa0590940 | Msa0945480 | 0.849932 | 2.353809e-60 | -8.615850e-47 |
| Msa0593700 | Msa0945480 | 0.817514 | 3.170934e-52 | -8.615850e-47 |
| Msa0596370 | Msa0945480 | 0.810060 | 1.390621e-50 | -8.615850e-47 |
| Msa0844220 | Msa0945480 | -0.804020 | 2.639823e-49 | -8.615850e-47 |
| Msa0876170 | Msa0945480 | 0.836491 | 9.071433e-57 | -8.615850e-47 |
| Msa0888810 | Msa0945480 | 0.855122 | 7.795766e-62 | -8.615850e-47 |
| Msa0915540 | Msa0945480 | 0.812296 | 4.554297e-51 | -8.615850e-47 |
| Msa0945480 | Msa0960830 | 0.821768 | 3.387388e-53 | -8.615850e-47 |
| Msa0945480 | Msa0963020 | 0.811245 | 7.708187e-51 | -8.615850e-47 |
| Msa0945480 | Msa0970110 | 0.808738 | 2.672820e-50 | -8.615850e-47 |
| Msa0945480 | Msa1019240 | 0.861258 | 1.163932e-63 | -8.615850e-47 |
| Msa0945480 | Msa1019260 | 0.853534 | 2.242667e-61 | -8.615850e-47 |
| Msa0945480 | Msa1021120 | 0.832422 | 9.541231e-56 | -8.615850e-47 |
| Msa0945480 | Msa1037290 | 0.836528 | 8.879259e-57 | -8.615850e-47 |
| Msa0945480 | Msa1039520 | 0.821500 | 3.907271e-53 | -8.615850e-47 |
| Msa0945480 | Msa1048690 | 0.859908 | 2.986212e-63 | -8.615850e-47 |
| Msa0945480 | Msa1072710 | 0.845321 | 4.368244e-59 | -8.615850e-47 |
| Msa0945480 | Msa1078870 | 0.807120 | 5.901702e-50 | -8.615850e-47 |
| Msa0945480 | Msa1080350 | 0.876710 | 1.124080e-68 | -8.615850e-47 |
| Msa0945480 | Msa1082170 | 0.816456 | 5.480158e-52 | -8.615850e-47 |
| Msa0945480 | Msa1085470 | 0.833364 | 5.564354e-56 | -8.615850e-47 |
| Msa0945480 | Msa1088490 | 0.860582 | 1.868285e-63 | -8.615850e-47 |
| Msa0945480 | Msa1100710 | 0.810781 | 9.719674e-51 | -8.615850e-47 |
| Msa0945480 | Msa1104210 | 0.852288 | 5.092183e-61 | -8.615850e-47 |
| Msa0945480 | Msa1115620 | 0.833353 | 5.598652e-56 | -8.615850e-47 |
| Msa0945480 | Msa1122820 | 0.809224 | 2.103349e-50 | -8.615850e-47 |
| Msa0945480 | Msa1125500 | 0.852986 | 3.219119e-61 | -8.615850e-47 |
| Msa0945480 | Msa1125580 | 0.848835 | 4.757767e-60 | -8.615850e-47 |
| Msa0945480 | Msa1125860 | 0.870441 | 1.456011e-66 | -8.615850e-47 |
| Msa0945480 | Msa1126060 | 0.865084 | 7.628187e-65 | -8.615850e-47 |
| Msa0945480 | Msa1126470 | 0.826701 | 2.348322e-54 | -8.615850e-47 |
| Msa0945480 | Msa1126510 | 0.821981 | 3.022940e-53 | -8.615850e-47 |
| Msa0945480 | Msa1126520 | 0.870416 | 1.483979e-66 | -8.615850e-47 |
| Msa0945480 | Msa1131170 | 0.804005 | 2.658994e-49 | -8.615850e-47 |
| Msa0945480 | Msa1165780 | 0.814274 | 1.674572e-51 | -8.615850e-47 |
| Msa0945480 | Msa1166860 | 0.836990 | 6.765580e-57 | -8.615850e-47 |
| Msa0945480 | Msa1166870 | 0.890418 | 1.002913e-73 | -8.615850e-47 |
| Msa0945480 | Msa1179980 | 0.811114 | 8.231769e-51 | -8.615850e-47 |
| Msa0945480 | Msa1183450 | 0.821992 | 3.005838e-53 | -8.615850e-47 |
| Msa0945480 | Msa1184370 | 0.812399 | 4.323276e-51 | -8.615850e-47 |
| Msa0945480 | Msa1186980 | 0.810818 | 9.539234e-51 | -8.615850e-47 |
| Msa0945480 | Msa1208020 | 0.841908 | 3.571351e-58 | -8.615850e-47 |
| Msa0945480 | Msa1215820 | 0.815376 | 9.543642e-52 | -8.615850e-47 |
| Msa0945480 | Msa1218170 | 0.811546 | 6.632054e-51 | -8.615850e-47 |
| Msa0945480 | Msa1227690 | 0.835661 | 1.473586e-56 | -8.615850e-47 |
| Msa0945480 | Msa1230580 | 0.805443 | 1.331613e-49 | -8.615850e-47 |
| Msa0945480 | Msa1241190 | 0.856340 | 3.437305e-62 | -8.615850e-47 |
| Msa0945480 | Msa1256770 | 0.802000 | 6.904936e-49 | -8.615850e-47 |
| Msa0945480 | Msa1256840 | 0.845934 | 2.978294e-59 | -8.615850e-47 |
| Msa0945480 | Msa1257510 | 0.812905 | 3.350856e-51 | -8.615850e-47 |
| Msa0945480 | Msa1260530 | 0.811628 | 6.365865e-51 | -8.615850e-47 |
| Msa0945480 | Msa1270620 | 0.809725 | 1.641742e-50 | -8.615850e-47 |
| Msa0945480 | Msa1270690 | 0.807253 | 5.533096e-50 | -8.615850e-47 |
| Msa0945480 | Msa1298050 | 0.806990 | 6.288886e-50 | -8.615850e-47 |
| Msa0945480 | Msa1305050 | 0.815570 | 8.639129e-52 | -8.615850e-47 |
| Msa0945480 | Msa1311400 | 0.811483 | 6.844336e-51 | -8.615850e-47 |
| Msa0945480 | Msa1316680 | 0.858124 | 1.021505e-62 | -8.615850e-47 |
| Msa0945480 | Msa1321790 | 0.827264 | 1.721921e-54 | -8.615850e-47 |
| Msa0945480 | Msa1329300 | 0.812297 | 4.550351e-51 | -8.615850e-47 |
| Msa0945480 | Msa1331250 | 0.819213 | 1.307198e-52 | -8.615850e-47 |
| Msa0945480 | Msa1331710 | 0.847446 | 1.150448e-59 | -8.615850e-47 |
| Msa0945480 | Msa1332250 | 0.825137 | 5.522545e-54 | -8.615850e-47 |
| Msa0945480 | Msa1338190 | 0.847402 | 1.183282e-59 | -8.615850e-47 |
| Msa0945480 | Msa1345450 | 0.802850 | 4.613697e-49 | -8.615850e-47 |
| Msa0945480 | Msa1349570 | 0.914172 | 2.618404e-84 | -8.615850e-47 |
| Msa0945480 | Msa1356790 | 0.913736 | 4.353121e-84 | -8.615850e-47 |
| Msa0945480 | Msa1362790 | 0.872920 | 2.195244e-67 | -8.615850e-47 |
| Msa0945480 | Msa1363330 | 0.846628 | 1.927041e-59 | -8.615850e-47 |
| Msa0945480 | Msa1363860 | 0.817452 | 3.274085e-52 | -8.615850e-47 |
| Msa0945480 | Msa1366180 | 0.829090 | 6.250975e-55 | -8.615850e-47 |
| Msa0945480 | Msa1368920 | 0.834321 | 3.206973e-56 | -8.615850e-47 |
| Msa0945480 | Msa1369190 | 0.917412 | 5.477339e-86 | -8.615850e-47 |
| Msa0945480 | Msa1370860 | 0.815400 | 9.425597e-52 | -8.615850e-47 |
| Msa0945480 | Msa1374240 | 0.862752 | 4.056553e-64 | -8.615850e-47 |
| Msa0945480 | Msa1379760 | 0.823337 | 1.462280e-53 | -8.615850e-47 |
| Msa0945480 | Msa1386600 | 0.845514 | 3.873703e-59 | -8.615850e-47 |
| Msa0945480 | Msa1387410 | 0.834515 | 2.866831e-56 | -8.615850e-47 |
| Msa0945480 | Msa1392590 | 0.869369 | 3.260200e-66 | -8.615850e-47 |
| Msa0945480 | Msa1397100 | 0.820002 | 8.632060e-53 | -8.615850e-47 |
| Msa0945480 | Msa1403910 | 0.848783 | 4.917339e-60 | -8.615850e-47 |
| Msa0945480 | Msa1406080 | 0.847578 | 1.058352e-59 | -8.615850e-47 |
| Msa0945480 | Msa1413260 | 0.811893 | 5.575683e-51 | -8.615850e-47 |
| Msa0945480 | Msa1413500 | 0.887970 | 8.931813e-73 | -8.615850e-47 |
| Msa0945480 | Msa1425670 | 0.827507 | 1.505698e-54 | -8.615850e-47 |
| Msa0945480 | Msa1426120 | 0.810191 | 1.303112e-50 | -8.615850e-47 |
| Msa0945480 | Msa1426370 | 0.868203 | 7.774543e-66 | -8.615850e-47 |
| Msa0945480 | Msa1426490 | 0.889008 | 3.557162e-73 | -8.615850e-47 |
| Msa0945480 | Msa1427560 | 0.844455 | 7.482912e-59 | -8.615850e-47 |
| Msa0945480 | Msa1428810 | 0.805262 | 1.453533e-49 | -8.615850e-47 |
| Msa0945480 | Msa1433310 | 0.827631 | 1.406411e-54 | -8.615850e-47 |
| Msa0945480 | Msa1437280 | 0.836732 | 7.877482e-57 | -8.615850e-47 |
| Msa0945480 | Msa1442850 | 0.832584 | 8.698065e-56 | -8.615850e-47 |
| Msa0945480 | Msa1448690 | 0.822341 | 2.495045e-53 | -8.615850e-47 |
| Msa0945480 | Msa1450280 | 0.868163 | 8.009109e-66 | -8.615850e-47 |
| Msa0945480 | Msa1455950 | 0.843484 | 1.362299e-58 | -8.615850e-47 |
| Msa0945480 | Msa1456050 | 0.851670 | 7.629532e-61 | -8.615850e-47 |
| Msa0945480 | Msa1462860 | 0.886111 | 4.543410e-72 | -8.615850e-47 |
| Msa0945480 | Msa1465260 | 0.807230 | 5.594629e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0945480 | MtrunA17_Chr4g0033761 | 100.000 | 69 | 0 | 0 | 1 | 69 | 1 | 69 | 2.71e-45 | 139 |
| Msa0945480 | MtrunA17_Chr2g0285451 | 94.203 | 69 | 4 | 0 | 1 | 69 | 1 | 69 | 3.14e-42 | 131 |
| Msa0945480 | MtrunA17_Chr8g0376751 | 94.203 | 69 | 4 | 0 | 1 | 69 | 1 | 69 | 3.74e-42 | 131 |
| Msa0945480 | MtrunA17_Chr7g0216191 | 91.304 | 69 | 6 | 0 | 1 | 69 | 1 | 69 | 1.58e-38 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0945480 | AT2G43460.1 | 92.754 | 69 | 5 | 0 | 1 | 69 | 1 | 69 | 2.34e-42 | 132 |
| Msa0945480 | AT3G59540.1 | 92.754 | 69 | 5 | 0 | 1 | 69 | 1 | 69 | 2.34e-42 | 132 |
Find 33 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTATATTGAAGTCTTTC+CGG | 0.185075 | 6_3:+24273283 | Msa0945480:three_prime_UTR |
| AGCGTGCCGATTGTAATATT+TGG | 0.201571 | 6_3:+24271943 | Msa0945480:five_prime_UTR |
| CTAAGTCAATAGAGGTTAAT+TGG | 0.262257 | 6_3:+24273330 | Msa0945480:three_prime_UTR |
| GCGTGCCGATTGTAATATTT+GGG | 0.285896 | 6_3:+24271944 | Msa0945480:five_prime_UTR |
| TAAGCAAATCAATGAGATTA+AGG | 0.290766 | 6_3:+24272410 | Msa0945480:CDS |
| TTTGCTTCTCTTGATCTTCA+CGG | 0.377542 | 6_3:-24272469 | None:intergenic |
| CAAAGATGTTGTCAAGTTCA+AGG | 0.412153 | 6_3:+24272488 | Msa0945480:CDS |
| CACAAACTAAACTCTTAAAC+CGG | 0.421323 | 6_3:+24271816 | Msa0945480:five_prime_UTR |
| TGTAATATTTGGGGAGGAAG+AGG | 0.445922 | 6_3:+24271954 | Msa0945480:five_prime_UTR |
| AGACTTCAATATAAGATAAG+AGG | 0.449457 | 6_3:-24273277 | None:intergenic |
| TCACTCAGTACACATTTAAC+CGG | 0.452174 | 6_3:-24273100 | None:intergenic |
| GTGAAGATCAAGTGTTGCTT+TGG | 0.469681 | 6_3:+24273119 | Msa0945480:three_prime_UTR |
| GCAAGACTTGTAATTCTATC+CGG | 0.485897 | 6_3:+24273081 | Msa0945480:exon |
| TCCTCCCCAAATATTACAAT+CGG | 0.489389 | 6_3:-24271949 | None:intergenic |
| ACAAAGTGTGTACAAGTACT+TGG | 0.506752 | 6_3:-24272520 | None:intergenic |
| ACTCTTAAACCGGCCCAATA+CGG | 0.523091 | 6_3:+24271826 | Msa0945480:five_prime_UTR |
| TTAATCTCATTGATTTGCTT+AGG | 0.531275 | 6_3:-24272408 | None:intergenic |
| CTTACGACTCTCATTATGAA+TGG | 0.536568 | 6_3:+24273195 | Msa0945480:three_prime_UTR |
| ATTACAATCGGCACGCTCGA+AGG | 0.536948 | 6_3:-24271937 | None:intergenic |
| GTCAATAGAGGTTAATTGGA+TGG | 0.539702 | 6_3:+24273334 | Msa0945480:three_prime_UTR |
| TACTGACAAGAAAATAGAGT+TGG | 0.557694 | 6_3:-24273219 | None:intergenic |
| AGGACTTCCTCCTCACTGCT+AGG | 0.557805 | 6_3:+24272430 | Msa0945480:CDS |
| TCATAATGAGAGTCGTAAGC+TGG | 0.559002 | 6_3:-24273191 | None:intergenic |
| CCTCCTCACTGCTAGGAGGA+AGG | 0.566472 | 6_3:+24272437 | Msa0945480:CDS |
| AACCCTATATTATGAAAAGA+CGG | 0.587966 | 6_3:-24271882 | None:intergenic |
| GCCGATTGTAATATTTGGGG+AGG | 0.594026 | 6_3:+24271948 | Msa0945480:five_prime_UTR |
| CGTGCCGATTGTAATATTTG+GGG | 0.609894 | 6_3:+24271945 | Msa0945480:five_prime_UTR |
| TTAAACCGGCCCAATACGGA+AGG | 0.612992 | 6_3:+24271830 | Msa0945480:five_prime_UTR |
| TACTATCCTTATCTCAACGC+GGG | 0.636629 | 6_3:-24271859 | None:intergenic |
| CCTTCCTCCTAGCAGTGAGG+AGG | 0.657731 | 6_3:-24272437 | None:intergenic |
| ACTTCCTCCTCACTGCTAGG+AGG | 0.666318 | 6_3:+24272433 | Msa0945480:CDS |
| CATCCTTCCTCCTAGCAGTG+AGG | 0.669946 | 6_3:-24272440 | None:intergenic |
| GTACTATCCTTATCTCAACG+CGG | 0.750896 | 6_3:-24271860 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATATTTTTTTTTATT+TGG | + | chr6_3:24272315-24272334 | Msa0945480:intron | 0.0% |
| !!! | TTATTATATTTTTTTTTATT+TGG | + | chr6_3:24272315-24272334 | Msa0945480:intron | 0.0% |
| !!! | AATTTTTTTTACTCAATTTT+AGG | + | chr6_3:24272165-24272184 | Msa0945480:intron | 10.0% |
| !!! | ATTTTTTTTACTCAATTTTA+GGG | + | chr6_3:24272166-24272185 | Msa0945480:intron | 10.0% |
| !!! | TATTTTTTTTTATTTGGATT+TGG | + | chr6_3:24272321-24272340 | Msa0945480:intron | 10.0% |
| !! | AATCTATAAAGTAAATAATA+AGG | + | chr6_3:24272763-24272782 | Msa0945480:intron | 10.0% |
| !! | ATCTATAAAGTAAATAATAA+GGG | + | chr6_3:24272764-24272783 | Msa0945480:intron | 10.0% |
| !!! | AATTTTTTTTACTCAATTTT+AGG | + | chr6_3:24272165-24272184 | Msa0945480:intron | 10.0% |
| !!! | ATTTTTTTTACTCAATTTTA+GGG | + | chr6_3:24272166-24272185 | Msa0945480:intron | 10.0% |
| !!! | TATTTTTTTTTATTTGGATT+TGG | + | chr6_3:24272321-24272340 | Msa0945480:intron | 10.0% |
| !! | AATCTATAAAGTAAATAATA+AGG | + | chr6_3:24272763-24272782 | Msa0945480:intron | 10.0% |
| !! | ATCTATAAAGTAAATAATAA+GGG | + | chr6_3:24272764-24272783 | Msa0945480:intron | 10.0% |
| !! | ATTGAGTAAAAAAAATTCAT+AGG | - | chr6_3:24272162-24272181 | None:intergenic | 15.0% |
| !! | GTGTAATAATTGTTTAAAAA+TGG | + | chr6_3:24272740-24272759 | Msa0945480:intron | 15.0% |
| !! | TCTATAAAGTAAATAATAAG+GGG | + | chr6_3:24272765-24272784 | Msa0945480:intron | 15.0% |
| !!! | TGTTATTTGTTATTTATTCT+AGG | + | chr6_3:24272968-24272987 | Msa0945480:intron | 15.0% |
| !! | ATTGAGTAAAAAAAATTCAT+AGG | - | chr6_3:24272162-24272181 | None:intergenic | 15.0% |
| !! | GTGTAATAATTGTTTAAAAA+TGG | + | chr6_3:24272740-24272759 | Msa0945480:intron | 15.0% |
| !! | TCTATAAAGTAAATAATAAG+GGG | + | chr6_3:24272765-24272784 | Msa0945480:intron | 15.0% |
| !!! | TGTTATTTGTTATTTATTCT+AGG | + | chr6_3:24272968-24272987 | Msa0945480:intron | 15.0% |
| !!! | TCAATTCACAATTTTTTTGT+AGG | + | chr6_3:24272052-24272071 | Msa0945480:intron | 20.0% |
| !!! | ACAATTTTTTTGTAGGAAAT+TGG | + | chr6_3:24272059-24272078 | Msa0945480:intron | 20.0% |
| !! | AAAACATTGAAAATCAAGAT+AGG | - | chr6_3:24272102-24272121 | None:intergenic | 20.0% |
| !! | ATTATACATTGATCTGAATT+AGG | + | chr6_3:24272227-24272246 | Msa0945480:intron | 20.0% |
| !! | TTATACATTGATCTGAATTA+GGG | + | chr6_3:24272228-24272247 | Msa0945480:intron | 20.0% |
| !! | ACATTTCAATAAACACAAAA+AGG | - | chr6_3:24272386-24272405 | None:intergenic | 20.0% |
| !! | AAACAATTATTACACCTTTA+AGG | - | chr6_3:24272735-24272754 | None:intergenic | 20.0% |
| !! | TGAGATTTATGAATAAGAAA+TGG | - | chr6_3:24272838-24272857 | None:intergenic | 20.0% |
| !! | TCAGATTTATGAATATGAAA+TGG | - | chr6_3:24272933-24272952 | None:intergenic | 20.0% |
| !! | ACTACAAGACAAAAATATAT+TGG | - | chr6_3:24273157-24273176 | None:intergenic | 20.0% |
| !! | AAACATATTCAAAAAACAAC+CGG | - | chr6_3:24273305-24273324 | None:intergenic | 20.0% |
| !!! | TCAATTCACAATTTTTTTGT+AGG | + | chr6_3:24272052-24272071 | Msa0945480:intron | 20.0% |
| !!! | ACAATTTTTTTGTAGGAAAT+TGG | + | chr6_3:24272059-24272078 | Msa0945480:intron | 20.0% |
| !! | AAAACATTGAAAATCAAGAT+AGG | - | chr6_3:24272102-24272121 | None:intergenic | 20.0% |
| !! | ATTATACATTGATCTGAATT+AGG | + | chr6_3:24272227-24272246 | Msa0945480:intron | 20.0% |
| !! | TTATACATTGATCTGAATTA+GGG | + | chr6_3:24272228-24272247 | Msa0945480:intron | 20.0% |
| !! | ACATTTCAATAAACACAAAA+AGG | - | chr6_3:24272386-24272405 | None:intergenic | 20.0% |
| !! | AAACAATTATTACACCTTTA+AGG | - | chr6_3:24272735-24272754 | None:intergenic | 20.0% |
| !! | TGAGATTTATGAATAAGAAA+TGG | - | chr6_3:24272838-24272857 | None:intergenic | 20.0% |
| !! | TCAGATTTATGAATATGAAA+TGG | - | chr6_3:24272933-24272952 | None:intergenic | 20.0% |
| !! | ACTACAAGACAAAAATATAT+TGG | - | chr6_3:24273157-24273176 | None:intergenic | 20.0% |
| !! | AAACATATTCAAAAAACAAC+CGG | - | chr6_3:24273305-24273324 | None:intergenic | 20.0% |
| !! | TACCGTCTTTTCATAATATA+GGG | + | chr6_3:24271880-24271899 | Msa0945480:five_prime_UTR | 25.0% |
| ! | AACCCTATATTATGAAAAGA+CGG | - | chr6_3:24271885-24271904 | None:intergenic | 25.0% |
| ! | AACAAGTGAAATTGAATCAA+TGG | + | chr6_3:24272196-24272215 | Msa0945480:intron | 25.0% |
| !!! | TGGTTTTTGATTTTCAAACT+TGG | + | chr6_3:24272257-24272276 | Msa0945480:intron | 25.0% |
| !!! | TTAATCTCATTGATTTGCTT+AGG | - | chr6_3:24272411-24272430 | None:intergenic | 25.0% |
| ! | TAAGCAAATCAATGAGATTA+AGG | + | chr6_3:24272410-24272429 | Msa0945480:CDS | 25.0% |
| ! | TAATTCTCAAAAACTAACCT+GGG | - | chr6_3:24272590-24272609 | None:intergenic | 25.0% |
| ! | ATAATTCTCAAAAACTAACC+TGG | - | chr6_3:24272591-24272610 | None:intergenic | 25.0% |
| !!! | TAGTTTTTGAGAATTATCGT+TGG | + | chr6_3:24272594-24272613 | Msa0945480:intron | 25.0% |
| ! | CAACAGAAATAAACAATCTA+TGG | - | chr6_3:24272695-24272714 | None:intergenic | 25.0% |
| !!! | CATAGATTGTTTATTTCTGT+TGG | + | chr6_3:24272693-24272712 | Msa0945480:intron | 25.0% |
| !!! | TTATTTCTGTTGGTTGTTAT+AGG | + | chr6_3:24272703-24272722 | Msa0945480:intron | 25.0% |
| ! | TCTTATTCATAAATCTCAAC+TGG | + | chr6_3:24272840-24272859 | Msa0945480:intron | 25.0% |
| ! | CTTATTCATAAATCTCAACT+GGG | + | chr6_3:24272841-24272860 | Msa0945480:intron | 25.0% |
| ! | TTATGAATATGAAATGGAAG+AGG | - | chr6_3:24272927-24272946 | None:intergenic | 25.0% |
| !! | AGATGTAGAAATTTGAGTTT+AGG | + | chr6_3:24273014-24273033 | Msa0945480:intron | 25.0% |
| ! | AGACTTCAATATAAGATAAG+AGG | - | chr6_3:24273280-24273299 | None:intergenic | 25.0% |
| ! | ATCTTATATTGAAGTCTTTC+CGG | + | chr6_3:24273283-24273302 | Msa0945480:three_prime_UTR | 25.0% |
| !! | TCAATCAGTAGAAAGTTTTT+AGG | + | chr6_3:24273373-24273392 | Msa0945480:three_prime_UTR | 25.0% |
| !! | TACCGTCTTTTCATAATATA+GGG | + | chr6_3:24271880-24271899 | Msa0945480:five_prime_UTR | 25.0% |
| ! | AACCCTATATTATGAAAAGA+CGG | - | chr6_3:24271885-24271904 | None:intergenic | 25.0% |
| ! | AACAAGTGAAATTGAATCAA+TGG | + | chr6_3:24272196-24272215 | Msa0945480:intron | 25.0% |
| !!! | TGGTTTTTGATTTTCAAACT+TGG | + | chr6_3:24272257-24272276 | Msa0945480:intron | 25.0% |
| !!! | TTAATCTCATTGATTTGCTT+AGG | - | chr6_3:24272411-24272430 | None:intergenic | 25.0% |
| ! | TAAGCAAATCAATGAGATTA+AGG | + | chr6_3:24272410-24272429 | Msa0945480:CDS | 25.0% |
| ! | TAATTCTCAAAAACTAACCT+GGG | - | chr6_3:24272590-24272609 | None:intergenic | 25.0% |
| ! | ATAATTCTCAAAAACTAACC+TGG | - | chr6_3:24272591-24272610 | None:intergenic | 25.0% |
| !!! | TAGTTTTTGAGAATTATCGT+TGG | + | chr6_3:24272594-24272613 | Msa0945480:intron | 25.0% |
| ! | CAACAGAAATAAACAATCTA+TGG | - | chr6_3:24272695-24272714 | None:intergenic | 25.0% |
| !!! | CATAGATTGTTTATTTCTGT+TGG | + | chr6_3:24272693-24272712 | Msa0945480:intron | 25.0% |
| !!! | TTATTTCTGTTGGTTGTTAT+AGG | + | chr6_3:24272703-24272722 | Msa0945480:intron | 25.0% |
| ! | TCTTATTCATAAATCTCAAC+TGG | + | chr6_3:24272840-24272859 | Msa0945480:intron | 25.0% |
| ! | CTTATTCATAAATCTCAACT+GGG | + | chr6_3:24272841-24272860 | Msa0945480:intron | 25.0% |
| ! | TTATGAATATGAAATGGAAG+AGG | - | chr6_3:24272927-24272946 | None:intergenic | 25.0% |
| !! | AGATGTAGAAATTTGAGTTT+AGG | + | chr6_3:24273014-24273033 | Msa0945480:intron | 25.0% |
| ! | AGACTTCAATATAAGATAAG+AGG | - | chr6_3:24273280-24273299 | None:intergenic | 25.0% |
| ! | ATCTTATATTGAAGTCTTTC+CGG | + | chr6_3:24273283-24273302 | Msa0945480:three_prime_UTR | 25.0% |
| !! | TCAATCAGTAGAAAGTTTTT+AGG | + | chr6_3:24273373-24273392 | Msa0945480:three_prime_UTR | 25.0% |
| CACAAACTAAACTCTTAAAC+CGG | + | chr6_3:24271816-24271835 | Msa0945480:five_prime_UTR | 30.0% | |
| ! | GTACCGTCTTTTCATAATAT+AGG | + | chr6_3:24271879-24271898 | Msa0945480:five_prime_UTR | 30.0% |
| ! | TCGAAGGTTTGAGAATTTTA+GGG | - | chr6_3:24271924-24271943 | None:intergenic | 30.0% |
| GATCTGAATTAGGGAATTTA+TGG | + | chr6_3:24272237-24272256 | Msa0945480:intron | 30.0% | |
| !! | TCAAACTTGGTAGTTGATAA+AGG | + | chr6_3:24272270-24272289 | Msa0945480:intron | 30.0% |
| !! | CAAACTTGGTAGTTGATAAA+GGG | + | chr6_3:24272271-24272290 | Msa0945480:intron | 30.0% |
| AATTCTCAAAAACTAACCTG+GGG | - | chr6_3:24272589-24272608 | None:intergenic | 30.0% | |
| ! | TTATCGTTGGTTGTATGTTA+TGG | + | chr6_3:24272607-24272626 | Msa0945480:intron | 30.0% |
| ATAATAAGGGGATTGTGTAA+TGG | + | chr6_3:24272777-24272796 | Msa0945480:intron | 30.0% | |
| TGTAATGGCCAAATAGATAT+GGG | + | chr6_3:24272792-24272811 | Msa0945480:intron | 30.0% | |
| ATATTCTCCCCATATCTATT+TGG | - | chr6_3:24272803-24272822 | None:intergenic | 30.0% | |
| TTATGAATAAGAAATGGCAG+AGG | - | chr6_3:24272832-24272851 | None:intergenic | 30.0% | |
| TTGGGAACAACTTATGATAT+GGG | + | chr6_3:24272887-24272906 | Msa0945480:intron | 30.0% | |
| TCATATTCATAAATCTGAGC+TGG | + | chr6_3:24272935-24272954 | Msa0945480:intron | 30.0% | |
| AGTGAAACGTAAATGTAAGT+AGG | - | chr6_3:24273044-24273063 | None:intergenic | 30.0% | |
| TACTGACAAGAAAATAGAGT+TGG | - | chr6_3:24273222-24273241 | None:intergenic | 30.0% | |
| !! | TTTTTGAGCTAAGTCAATAG+AGG | + | chr6_3:24273322-24273341 | Msa0945480:three_prime_UTR | 30.0% |
| CTAAGTCAATAGAGGTTAAT+TGG | + | chr6_3:24273330-24273349 | Msa0945480:three_prime_UTR | 30.0% | |
| CACAAACTAAACTCTTAAAC+CGG | + | chr6_3:24271816-24271835 | Msa0945480:five_prime_UTR | 30.0% | |
| ! | GTACCGTCTTTTCATAATAT+AGG | + | chr6_3:24271879-24271898 | Msa0945480:five_prime_UTR | 30.0% |
| ! | TCGAAGGTTTGAGAATTTTA+GGG | - | chr6_3:24271924-24271943 | None:intergenic | 30.0% |
| GATCTGAATTAGGGAATTTA+TGG | + | chr6_3:24272237-24272256 | Msa0945480:intron | 30.0% | |
| !! | TCAAACTTGGTAGTTGATAA+AGG | + | chr6_3:24272270-24272289 | Msa0945480:intron | 30.0% |
| !! | CAAACTTGGTAGTTGATAAA+GGG | + | chr6_3:24272271-24272290 | Msa0945480:intron | 30.0% |
| AATTCTCAAAAACTAACCTG+GGG | - | chr6_3:24272589-24272608 | None:intergenic | 30.0% | |
| ! | TTATCGTTGGTTGTATGTTA+TGG | + | chr6_3:24272607-24272626 | Msa0945480:intron | 30.0% |
| ATAATAAGGGGATTGTGTAA+TGG | + | chr6_3:24272777-24272796 | Msa0945480:intron | 30.0% | |
| TGTAATGGCCAAATAGATAT+GGG | + | chr6_3:24272792-24272811 | Msa0945480:intron | 30.0% | |
| ATATTCTCCCCATATCTATT+TGG | - | chr6_3:24272803-24272822 | None:intergenic | 30.0% | |
| TTATGAATAAGAAATGGCAG+AGG | - | chr6_3:24272832-24272851 | None:intergenic | 30.0% | |
| TTGGGAACAACTTATGATAT+GGG | + | chr6_3:24272887-24272906 | Msa0945480:intron | 30.0% | |
| TCATATTCATAAATCTGAGC+TGG | + | chr6_3:24272935-24272954 | Msa0945480:intron | 30.0% | |
| AGTGAAACGTAAATGTAAGT+AGG | - | chr6_3:24273044-24273063 | None:intergenic | 30.0% | |
| TACTGACAAGAAAATAGAGT+TGG | - | chr6_3:24273222-24273241 | None:intergenic | 30.0% | |
| !! | TTTTTGAGCTAAGTCAATAG+AGG | + | chr6_3:24273322-24273341 | Msa0945480:three_prime_UTR | 30.0% |
| CTAAGTCAATAGAGGTTAAT+TGG | + | chr6_3:24273330-24273349 | Msa0945480:three_prime_UTR | 30.0% | |
| ! | CTCGAAGGTTTGAGAATTTT+AGG | - | chr6_3:24271925-24271944 | None:intergenic | 35.0% |
| TCCTCCCCAAATATTACAAT+CGG | - | chr6_3:24271952-24271971 | None:intergenic | 35.0% | |
| GAAACACTGCAAAGAATCAA+TGG | - | chr6_3:24272020-24272039 | None:intergenic | 35.0% | |
| CTGTGTTGTGATTTGAAAGA+TGG | + | chr6_3:24272348-24272367 | Msa0945480:intron | 35.0% | |
| TTTGCTTCTCTTGATCTTCA+CGG | - | chr6_3:24272472-24272491 | None:intergenic | 35.0% | |
| CAAAGATGTTGTCAAGTTCA+AGG | + | chr6_3:24272488-24272507 | Msa0945480:CDS | 35.0% | |
| ACAAAGTGTGTACAAGTACT+TGG | - | chr6_3:24272523-24272542 | None:intergenic | 35.0% | |
| ATTCTCAAAAACTAACCTGG+GGG | - | chr6_3:24272588-24272607 | None:intergenic | 35.0% | |
| ! | TTCTGTTGGTTGTTATAGGT+CGG | + | chr6_3:24272707-24272726 | Msa0945480:intron | 35.0% |
| GTGTAATGGCCAAATAGATA+TGG | + | chr6_3:24272791-24272810 | Msa0945480:intron | 35.0% | |
| GTAATGGCCAAATAGATATG+GGG | + | chr6_3:24272793-24272812 | Msa0945480:intron | 35.0% | |
| !!! | TGCTATTTTTCTCTCTCAGT+TGG | + | chr6_3:24272868-24272887 | Msa0945480:intron | 35.0% |
| !!! | GCTATTTTTCTCTCTCAGTT+GGG | + | chr6_3:24272869-24272888 | Msa0945480:intron | 35.0% |
| GTTGGGAACAACTTATGATA+TGG | + | chr6_3:24272886-24272905 | Msa0945480:intron | 35.0% | |
| TGGGAACAACTTATGATATG+GGG | + | chr6_3:24272888-24272907 | Msa0945480:intron | 35.0% | |
| !! | CATTTACGTTTCACTTTTGC+AGG | + | chr6_3:24273049-24273068 | Msa0945480:intron | 35.0% |
| GCAAGACTTGTAATTCTATC+CGG | + | chr6_3:24273081-24273100 | Msa0945480:exon | 35.0% | |
| TCACTCAGTACACATTTAAC+CGG | - | chr6_3:24273103-24273122 | None:intergenic | 35.0% | |
| CTTACGACTCTCATTATGAA+TGG | + | chr6_3:24273195-24273214 | Msa0945480:three_prime_UTR | 35.0% | |
| GTCAATAGAGGTTAATTGGA+TGG | + | chr6_3:24273334-24273353 | Msa0945480:three_prime_UTR | 35.0% | |
| ! | CTCGAAGGTTTGAGAATTTT+AGG | - | chr6_3:24271925-24271944 | None:intergenic | 35.0% |
| TCCTCCCCAAATATTACAAT+CGG | - | chr6_3:24271952-24271971 | None:intergenic | 35.0% | |
| GAAACACTGCAAAGAATCAA+TGG | - | chr6_3:24272020-24272039 | None:intergenic | 35.0% | |
| CTGTGTTGTGATTTGAAAGA+TGG | + | chr6_3:24272348-24272367 | Msa0945480:intron | 35.0% | |
| TTTGCTTCTCTTGATCTTCA+CGG | - | chr6_3:24272472-24272491 | None:intergenic | 35.0% | |
| CAAAGATGTTGTCAAGTTCA+AGG | + | chr6_3:24272488-24272507 | Msa0945480:CDS | 35.0% | |
| ACAAAGTGTGTACAAGTACT+TGG | - | chr6_3:24272523-24272542 | None:intergenic | 35.0% | |
| ATTCTCAAAAACTAACCTGG+GGG | - | chr6_3:24272588-24272607 | None:intergenic | 35.0% | |
| ! | TTCTGTTGGTTGTTATAGGT+CGG | + | chr6_3:24272707-24272726 | Msa0945480:intron | 35.0% |
| GTGTAATGGCCAAATAGATA+TGG | + | chr6_3:24272791-24272810 | Msa0945480:intron | 35.0% | |
| GTAATGGCCAAATAGATATG+GGG | + | chr6_3:24272793-24272812 | Msa0945480:intron | 35.0% | |
| !!! | TGCTATTTTTCTCTCTCAGT+TGG | + | chr6_3:24272868-24272887 | Msa0945480:intron | 35.0% |
| !!! | GCTATTTTTCTCTCTCAGTT+GGG | + | chr6_3:24272869-24272888 | Msa0945480:intron | 35.0% |
| GTTGGGAACAACTTATGATA+TGG | + | chr6_3:24272886-24272905 | Msa0945480:intron | 35.0% | |
| TGGGAACAACTTATGATATG+GGG | + | chr6_3:24272888-24272907 | Msa0945480:intron | 35.0% | |
| !! | CATTTACGTTTCACTTTTGC+AGG | + | chr6_3:24273049-24273068 | Msa0945480:intron | 35.0% |
| GCAAGACTTGTAATTCTATC+CGG | + | chr6_3:24273081-24273100 | Msa0945480:exon | 35.0% | |
| TCACTCAGTACACATTTAAC+CGG | - | chr6_3:24273103-24273122 | None:intergenic | 35.0% | |
| CTTACGACTCTCATTATGAA+TGG | + | chr6_3:24273195-24273214 | Msa0945480:three_prime_UTR | 35.0% | |
| GTCAATAGAGGTTAATTGGA+TGG | + | chr6_3:24273334-24273353 | Msa0945480:three_prime_UTR | 35.0% | |
| TACTATCCTTATCTCAACGC+GGG | - | chr6_3:24271862-24271881 | None:intergenic | 40.0% | |
| GTACTATCCTTATCTCAACG+CGG | - | chr6_3:24271863-24271882 | None:intergenic | 40.0% | |
| !! | AGCGTGCCGATTGTAATATT+TGG | + | chr6_3:24271943-24271962 | Msa0945480:five_prime_UTR | 40.0% |
| !! | GCGTGCCGATTGTAATATTT+GGG | + | chr6_3:24271944-24271963 | Msa0945480:five_prime_UTR | 40.0% |
| !! | CGTGCCGATTGTAATATTTG+GGG | + | chr6_3:24271945-24271964 | Msa0945480:five_prime_UTR | 40.0% |
| TGTAATATTTGGGGAGGAAG+AGG | + | chr6_3:24271954-24271973 | Msa0945480:five_prime_UTR | 40.0% | |
| ATCGCAGCGAAGACAAAAAA+TGG | + | chr6_3:24271979-24271998 | Msa0945480:exon | 40.0% | |
| GTGCAAGTACTTTCAACTCT+AGG | + | chr6_3:24272652-24272671 | Msa0945480:intron | 40.0% | |
| AGTACTTTCAACTCTAGGTG+AGG | + | chr6_3:24272657-24272676 | Msa0945480:intron | 40.0% | |
| GTTATAGGTCGGAACCTTAA+AGG | + | chr6_3:24272718-24272737 | Msa0945480:intron | 40.0% | |
| !! | GTGAAGATCAAGTGTTGCTT+TGG | + | chr6_3:24273119-24273138 | Msa0945480:three_prime_UTR | 40.0% |
| TCATAATGAGAGTCGTAAGC+TGG | - | chr6_3:24273194-24273213 | None:intergenic | 40.0% | |
| TACTATCCTTATCTCAACGC+GGG | - | chr6_3:24271862-24271881 | None:intergenic | 40.0% | |
| GTACTATCCTTATCTCAACG+CGG | - | chr6_3:24271863-24271882 | None:intergenic | 40.0% | |
| !! | AGCGTGCCGATTGTAATATT+TGG | + | chr6_3:24271943-24271962 | Msa0945480:five_prime_UTR | 40.0% |
| !! | GCGTGCCGATTGTAATATTT+GGG | + | chr6_3:24271944-24271963 | Msa0945480:five_prime_UTR | 40.0% |
| !! | CGTGCCGATTGTAATATTTG+GGG | + | chr6_3:24271945-24271964 | Msa0945480:five_prime_UTR | 40.0% |
| TGTAATATTTGGGGAGGAAG+AGG | + | chr6_3:24271954-24271973 | Msa0945480:five_prime_UTR | 40.0% | |
| ATCGCAGCGAAGACAAAAAA+TGG | + | chr6_3:24271979-24271998 | Msa0945480:exon | 40.0% | |
| GTGCAAGTACTTTCAACTCT+AGG | + | chr6_3:24272652-24272671 | Msa0945480:intron | 40.0% | |
| AGTACTTTCAACTCTAGGTG+AGG | + | chr6_3:24272657-24272676 | Msa0945480:intron | 40.0% | |
| GTTATAGGTCGGAACCTTAA+AGG | + | chr6_3:24272718-24272737 | Msa0945480:intron | 40.0% | |
| !! | GTGAAGATCAAGTGTTGCTT+TGG | + | chr6_3:24273119-24273138 | Msa0945480:three_prime_UTR | 40.0% |
| TCATAATGAGAGTCGTAAGC+TGG | - | chr6_3:24273194-24273213 | None:intergenic | 40.0% | |
| ACTCTTAAACCGGCCCAATA+CGG | + | chr6_3:24271826-24271845 | Msa0945480:five_prime_UTR | 45.0% | |
| ! | TTTTTCCTTCCGTATTGGGC+CGG | - | chr6_3:24271838-24271857 | None:intergenic | 45.0% |
| !! | GGGCTTTTTCCTTCCGTATT+GGG | - | chr6_3:24271842-24271861 | None:intergenic | 45.0% |
| AAAAAGCCCGCGTTGAGATA+AGG | + | chr6_3:24271853-24271872 | Msa0945480:five_prime_UTR | 45.0% | |
| GCCGATTGTAATATTTGGGG+AGG | + | chr6_3:24271948-24271967 | Msa0945480:five_prime_UTR | 45.0% | |
| ACTCTTAAACCGGCCCAATA+CGG | + | chr6_3:24271826-24271845 | Msa0945480:five_prime_UTR | 45.0% | |
| ! | TTTTTCCTTCCGTATTGGGC+CGG | - | chr6_3:24271838-24271857 | None:intergenic | 45.0% |
| !! | GGGCTTTTTCCTTCCGTATT+GGG | - | chr6_3:24271842-24271861 | None:intergenic | 45.0% |
| AAAAAGCCCGCGTTGAGATA+AGG | + | chr6_3:24271853-24271872 | Msa0945480:five_prime_UTR | 45.0% | |
| GCCGATTGTAATATTTGGGG+AGG | + | chr6_3:24271948-24271967 | Msa0945480:five_prime_UTR | 45.0% | |
| TTAAACCGGCCCAATACGGA+AGG | + | chr6_3:24271830-24271849 | Msa0945480:five_prime_UTR | 50.0% | |
| !! | CGGGCTTTTTCCTTCCGTAT+TGG | - | chr6_3:24271843-24271862 | None:intergenic | 50.0% |
| ATTACAATCGGCACGCTCGA+AGG | - | chr6_3:24271940-24271959 | None:intergenic | 50.0% | |
| TTGAAGCAATCACTTCCCCC+AGG | + | chr6_3:24272570-24272589 | Msa0945480:CDS | 50.0% | |
| TTAAACCGGCCCAATACGGA+AGG | + | chr6_3:24271830-24271849 | Msa0945480:five_prime_UTR | 50.0% | |
| !! | CGGGCTTTTTCCTTCCGTAT+TGG | - | chr6_3:24271843-24271862 | None:intergenic | 50.0% |
| ATTACAATCGGCACGCTCGA+AGG | - | chr6_3:24271940-24271959 | None:intergenic | 50.0% | |
| TTGAAGCAATCACTTCCCCC+AGG | + | chr6_3:24272570-24272589 | Msa0945480:CDS | 50.0% | |
| AGGACTTCCTCCTCACTGCT+AGG | + | chr6_3:24272430-24272449 | Msa0945480:CDS | 55.0% | |
| ACTTCCTCCTCACTGCTAGG+AGG | + | chr6_3:24272433-24272452 | Msa0945480:CDS | 55.0% | |
| CATCCTTCCTCCTAGCAGTG+AGG | - | chr6_3:24272443-24272462 | None:intergenic | 55.0% | |
| AGGACTTCCTCCTCACTGCT+AGG | + | chr6_3:24272430-24272449 | Msa0945480:CDS | 55.0% | |
| ACTTCCTCCTCACTGCTAGG+AGG | + | chr6_3:24272433-24272452 | Msa0945480:CDS | 55.0% | |
| CATCCTTCCTCCTAGCAGTG+AGG | - | chr6_3:24272443-24272462 | None:intergenic | 55.0% | |
| CCTTCCTCCTAGCAGTGAGG+AGG | - | chr6_3:24272440-24272459 | None:intergenic | 60.0% | |
| CCTCCTCACTGCTAGGAGGA+AGG | + | chr6_3:24272437-24272456 | Msa0945480:CDS | 60.0% | |
| CCTTCCTCCTAGCAGTGAGG+AGG | - | chr6_3:24272440-24272459 | None:intergenic | 60.0% | |
| CCTCCTCACTGCTAGGAGGA+AGG | + | chr6_3:24272437-24272456 | Msa0945480:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 24271816 | 24273405 | 24271816 | ID=Msa0945480;Name=Msa0945480 |
| chr6_3 | mRNA | 24271816 | 24273405 | 24271816 | ID=Msa0945480-mRNA-1;Parent=Msa0945480;Name=Msa0945480-mRNA-1;_AED=0.00;_eAED=0.00;_QI=182|1|1|1|0.5|0.66|3|312|69 |
| chr6_3 | exon | 24271816 | 24272000 | 24271816 | ID=Msa0945480-mRNA-1:exon:6837;Parent=Msa0945480-mRNA-1 |
| chr6_3 | exon | 24272408 | 24272591 | 24272408 | ID=Msa0945480-mRNA-1:exon:6838;Parent=Msa0945480-mRNA-1 |
| chr6_3 | exon | 24273071 | 24273405 | 24273071 | ID=Msa0945480-mRNA-1:exon:6839;Parent=Msa0945480-mRNA-1 |
| chr6_3 | five_prime_UTR | 24271816 | 24271997 | 24271816 | ID=Msa0945480-mRNA-1:five_prime_utr;Parent=Msa0945480-mRNA-1 |
| chr6_3 | CDS | 24271998 | 24272000 | 24271998 | ID=Msa0945480-mRNA-1:cds;Parent=Msa0945480-mRNA-1 |
| chr6_3 | CDS | 24272408 | 24272591 | 24272408 | ID=Msa0945480-mRNA-1:cds;Parent=Msa0945480-mRNA-1 |
| chr6_3 | CDS | 24273071 | 24273093 | 24273071 | ID=Msa0945480-mRNA-1:cds;Parent=Msa0945480-mRNA-1 |
| chr6_3 | three_prime_UTR | 24273094 | 24273405 | 24273094 | ID=Msa0945480-mRNA-1:three_prime_utr;Parent=Msa0945480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
