AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1367790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1367790 MtrunA17_Chr3g0145171 95.198 354 16 1 5 358 2 354 0.0 698
Msa1367790 MtrunA17_Chr8g0370711 76.136 352 83 1 7 358 4 354 0.0 572
Msa1367790 MtrunA17_Chr8g0370721 75.568 352 85 1 7 358 4 354 0.0 563
Msa1367790 MtrunA17_Chr3g0145181 67.908 349 104 5 14 358 9 353 4.57e-167 470
Msa1367790 MtrunA17_Chr3g0145201 69.551 312 89 4 51 358 679 988 4.09e-147 440
Msa1367790 MtrunA17_Chr4g0064781 50.725 345 157 4 16 358 15 348 1.24e-121 354
Msa1367790 MtrunA17_Chr3g0087031 41.441 333 188 4 13 343 19 346 1.92e-86 265
Msa1367790 MtrunA17_Chr2g0296371 39.776 357 202 7 8 358 7 356 2.64e-80 249
Msa1367790 MtrunA17_Chr5g0423251 38.372 344 203 4 17 358 12 348 8.59e-80 248
Msa1367790 MtrunA17_Chr2g0314401 37.209 344 209 3 17 358 16 354 8.47e-79 245
Msa1367790 MtrunA17_Chr2g0314391 39.244 344 202 3 17 358 35 373 1.48e-78 245
Msa1367790 MtrunA17_Chr5g0423191 40.523 306 177 3 55 358 46 348 1.13e-77 242
Msa1367790 MtrunA17_Chr7g0239111 40.129 309 175 5 30 336 32 332 1.14e-77 243
Msa1367790 MtrunA17_Chr5g0421041 36.337 344 208 4 17 358 12 346 1.97e-77 242
Msa1367790 MtrunA17_Chr5g0420981 38.889 306 183 3 55 358 52 355 2.68e-77 241
Msa1367790 MtrunA17_Chr2g0314381 38.438 333 193 5 17 346 41 364 1.97e-76 240
Msa1367790 MtrunA17_Chr5g0423221 39.016 305 182 2 56 358 71 373 2.80e-76 239
Msa1367790 MtrunA17_Chr8g0365241 38.926 298 178 3 55 350 56 351 1.03e-75 238
Msa1367790 MtrunA17_Chr8g0375671 40.000 300 176 3 54 351 50 347 2.00e-75 237
Msa1367790 MtrunA17_Chr7g0239101 38.206 301 177 4 56 355 55 347 1.50e-73 232
Msa1367790 MtrunA17_Chr5g0421011 38.235 306 184 3 55 358 46 348 5.06e-73 230
Msa1367790 MtrunA17_Chr8g0375601 39.590 293 173 3 55 346 47 336 5.28e-73 231
Msa1367790 MtrunA17_Chr8g0375701 40.453 309 170 5 56 358 55 355 9.28e-73 230
Msa1367790 MtrunA17_Chr7g0239121 35.329 334 203 7 30 358 28 353 9.73e-73 230
Msa1367790 MtrunA17_Chr5g0423201 35.211 355 220 5 7 358 2 349 1.23e-72 229
Msa1367790 MtrunA17_Chr5g0421101 35.465 344 213 4 17 358 12 348 1.59e-72 229
Msa1367790 MtrunA17_Chr8g0375571 35.072 345 216 4 9 351 2 340 6.10e-72 228
Msa1367790 MtrunA17_Chr1g0162191 39.583 288 172 2 55 342 46 331 8.52e-72 227
Msa1367790 MtrunA17_Chr7g0239821 35.621 306 192 3 55 358 63 365 3.86e-70 223
Msa1367790 MtrunA17_Chr7g0242551 37.809 283 172 2 54 332 52 334 3.22e-69 221
Msa1367790 MtrunA17_Chr5g0420951 36.570 309 192 3 52 358 49 355 4.58e-69 220
Msa1367790 MtrunA17_Chr8g0375681 40.590 271 158 2 90 358 16 285 4.54e-68 216
Msa1367790 MtrunA17_Chr5g0420901 34.188 351 218 5 12 358 6 347 5.38e-68 218
Msa1367790 MtrunA17_Chr5g0421091 35.838 346 210 4 17 358 10 347 6.25e-68 217
Msa1367790 MtrunA17_Chr5g0420941 36.103 349 212 5 13 358 6 346 6.34e-68 217
Msa1367790 MtrunA17_Chr7g0232161 42.798 243 136 2 51 293 55 294 1.39e-67 215
Msa1367790 MtrunA17_Chr4g0006371 36.207 290 181 2 50 335 56 345 2.25e-67 216
Msa1367790 MtrunA17_Chr7g0239071 39.130 276 161 4 87 358 29 301 5.12e-67 214
Msa1367790 MtrunA17_Chr5g0437181 37.234 282 172 3 55 332 48 328 8.55e-65 209
Msa1367790 MtrunA17_Chr4g0064771 43.191 257 94 1 94 350 1 205 1.42e-64 204
Msa1367790 MtrunA17_Chr3g0113641 36.014 286 180 2 50 332 44 329 2.49e-64 208
Msa1367790 MtrunA17_Chr5g0424201 33.030 330 210 6 10 336 1 322 3.67e-64 207
Msa1367790 MtrunA17_Chr5g0398291 33.837 331 204 8 15 334 5 331 8.36e-62 201
Msa1367790 MtrunA17_Chr3g0128001 36.610 295 179 5 55 348 37 324 3.91e-61 199
Msa1367790 MtrunA17_Chr5g0420721 39.113 248 148 2 113 358 4 250 3.37e-60 194
Msa1367790 MtrunA17_Chr5g0423211 34.091 308 194 5 56 358 47 350 2.20e-59 195
Msa1367790 MtrunA17_Chr3g0114861 34.409 279 176 5 74 348 53 328 3.80e-58 191
Msa1367790 MtrunA17_Chr2g0314371 35.625 320 166 7 17 308 16 323 2.82e-57 189
Msa1367790 MtrunA17_Chr3g0109041 35.691 311 186 8 56 355 42 349 1.57e-56 188
Msa1367790 MtrunA17_Chr5g0424211 34.520 281 174 5 54 329 40 315 2.26e-56 187
Msa1367790 MtrunA17_Chr1g0179801 33.529 340 206 9 16 346 25 353 1.18e-54 184
Msa1367790 MtrunA17_Chr8g0345831 34.797 296 185 7 56 349 42 331 1.33e-54 182
Msa1367790 MtrunA17_Chr7g0239091 34.967 306 184 5 55 358 159 451 1.60e-53 182
Msa1367790 MtrunA17_Chr6g0455481 34.286 315 188 8 44 351 30 332 7.62e-53 178
Msa1367790 MtrunA17_Chr2g0332191 34.868 304 177 9 56 349 52 344 7.92e-53 179
Msa1367790 MtrunA17_Chr5g0412671 35.526 304 187 7 56 353 38 338 6.46e-52 176
Msa1367790 MtrunA17_Chr5g0405411 32.099 324 209 7 22 342 9 324 2.22e-51 174
Msa1367790 MtrunA17_Chr2g0289341 32.566 304 190 8 55 352 3 297 2.58e-51 173
Msa1367790 MtrunA17_Chr3g0102041 30.032 313 209 6 26 335 13 318 3.12e-51 174
Msa1367790 MtrunA17_Chr5g0412651 34.967 306 186 8 56 353 38 338 6.25e-51 173
Msa1367790 MtrunA17_Chr8g0371931 32.759 290 188 6 56 342 39 324 9.63e-51 173
Msa1367790 MtrunA17_Chr7g0265221 32.797 311 184 8 50 346 61 360 2.37e-50 172
Msa1367790 MtrunA17_Chr4g0045471 35.880 301 170 9 56 336 26 323 5.77e-50 171
Msa1367790 MtrunA17_Chr3g0114871 36.325 234 139 5 52 281 38 265 1.23e-49 167
Msa1367790 MtrunA17_Chr5g0426891 34.694 294 177 8 56 341 39 325 1.43e-49 169
Msa1367790 MtrunA17_Chr5g0412681 33.660 306 188 6 56 356 33 328 6.16e-49 167
Msa1367790 MtrunA17_Chr3g0125201 31.884 276 176 3 54 325 1 268 6.90e-48 164
Msa1367790 MtrunA17_Chr8g0371921 31.724 290 191 6 56 342 39 324 9.43e-48 165
Msa1367790 MtrunA17_Chr4g0045441 36.120 299 167 9 56 334 26 320 1.34e-47 164
Msa1367790 MtrunA17_Chr3g0126741 32.333 300 189 9 56 350 59 349 8.00e-47 162
Msa1367790 MtrunA17_Chr1g0162321 33.333 303 174 8 55 334 68 365 1.38e-46 163
Msa1367790 MtrunA17_Chr4g0045451 35.548 301 170 9 56 336 26 322 1.82e-46 161
Msa1367790 MtrunA17_Chr1g0162351 33.663 303 173 8 55 334 68 365 2.43e-46 162
Msa1367790 MtrunA17_Chr3g0121141 30.464 302 197 7 55 352 3 295 3.06e-46 160
Msa1367790 MtrunA17_Chr1g0162361 35.714 294 166 8 56 334 27 312 7.34e-46 159
Msa1367790 MtrunA17_Chr7g0250511 29.643 280 191 5 56 333 49 324 5.13e-45 157
Msa1367790 MtrunA17_Chr1g0184111 32.808 317 193 10 45 348 17 326 7.69e-44 154
Msa1367790 MtrunA17_Chr7g0220011 33.803 284 175 6 56 335 39 313 9.45e-44 154
Msa1367790 MtrunA17_Chr1g0184161 29.907 321 213 9 30 348 16 326 1.58e-43 153
Msa1367790 MtrunA17_Chr4g0050031 30.868 311 201 7 56 358 62 366 2.80e-43 153
Msa1367790 MtrunA17_Chr1g0184121 31.546 317 197 9 45 348 17 326 3.01e-43 153
Msa1367790 MtrunA17_Chr8g0351101 30.351 313 204 7 54 355 52 361 9.86e-43 152
Msa1367790 MtrunA17_Chr6g0474391 29.814 322 197 7 53 355 61 372 1.55e-42 152
Msa1367790 MtrunA17_Chr5g0439011 30.182 275 180 6 54 325 3 268 1.96e-42 150
Msa1367790 MtrunA17_Chr1g0187831 29.167 312 207 8 51 354 65 370 2.23e-42 152
Msa1367790 MtrunA17_Chr1g0204181 30.159 315 205 7 53 355 56 367 4.44e-42 150
Msa1367790 MtrunA17_Chr8g0354261 31.741 293 184 7 50 333 62 347 1.09e-41 149
Msa1367790 MtrunA17_Chr1g0184151 29.153 295 201 7 56 348 38 326 3.65e-41 147
Msa1367790 MtrunA17_Chr2g0311921 30.233 301 190 7 56 347 54 343 8.37e-41 147
Msa1367790 MtrunA17_Chr3g0125421 31.190 311 192 8 30 328 17 317 1.01e-40 146
Msa1367790 MtrunA17_Chr8g0336781 32.000 300 189 9 56 348 95 386 1.45e-40 147
Msa1367790 MtrunA17_Chr7g0265351 32.390 318 199 10 47 358 30 337 1.58e-40 145
Msa1367790 MtrunA17_Chr2g0311741 31.596 307 192 8 50 349 21 316 2.80e-40 144
Msa1367790 MtrunA17_Chr4g0045431 34.448 299 172 9 56 334 26 320 2.92e-40 145
Msa1367790 MtrunA17_Chr8g0336761 30.903 288 179 7 56 333 60 337 5.36e-40 144
Msa1367790 MtrunA17_Chr2g0311681 32.168 286 182 6 50 331 57 334 8.73e-40 144
Msa1367790 MtrunA17_Chr8g0354241 30.000 320 206 8 50 358 62 374 1.16e-39 144
Msa1367790 MtrunA17_Chr2g0319491 30.496 282 176 8 56 333 33 298 1.73e-39 142
Msa1367790 MtrunA17_Chr2g0311701 31.475 305 192 7 50 343 63 361 1.97e-39 144
Msa1367790 MtrunA17_Chr8g0336751 31.410 312 201 7 54 358 92 397 2.12e-39 144
Msa1367790 MtrunA17_Chr2g0311711 32.414 290 184 7 50 333 61 344 2.74e-39 143
Msa1367790 MtrunA17_Chr8g0336851 29.524 315 200 8 56 358 60 364 3.24e-39 142
Msa1367790 MtrunA17_Chr2g0311631 30.255 314 201 8 56 358 55 361 5.33e-39 142
Msa1367790 MtrunA17_Chr4g0045411 30.640 297 183 8 56 335 30 320 8.89e-39 141
Msa1367790 MtrunA17_Chr3g0093761 32.573 307 194 7 56 358 56 353 1.21e-38 140
Msa1367790 MtrunA17_Chr1g0184101 31.561 301 194 7 53 346 29 324 1.32e-38 140
Msa1367790 MtrunA17_Chr2g0311691 31.615 291 180 7 54 333 61 343 1.47e-38 141
Msa1367790 MtrunA17_Chr7g0220001 31.343 268 178 5 84 349 65 328 1.79e-38 140
Msa1367790 MtrunA17_Chr7g0235951 29.283 321 203 8 52 358 63 373 2.34e-38 140
Msa1367790 MtrunA17_Chr2g0311761 33.205 259 158 5 56 308 68 317 2.36e-38 140
Msa1367790 MtrunA17_Chr1g0187821 29.180 305 195 8 50 343 61 355 2.62e-38 140
Msa1367790 MtrunA17_Chr8g0348081 30.233 301 187 10 56 344 60 349 6.23e-38 139
Msa1367790 MtrunA17_Chr2g0311831 31.359 287 178 7 56 333 68 344 6.46e-38 139
Msa1367790 MtrunA17_Chr4g0045461 33.445 299 178 9 56 336 26 321 1.71e-37 138
Msa1367790 MtrunA17_Chr6g0488511 29.348 276 181 5 54 324 1 267 2.11e-37 136
Msa1367790 MtrunA17_Chr4g0066121 30.293 307 191 9 56 351 60 354 4.22e-37 137
Msa1367790 MtrunA17_Chr3g0093741 31.169 308 198 8 56 358 56 354 4.49e-37 137
Msa1367790 MtrunA17_Chr8g0336861 29.747 316 200 9 56 358 60 366 1.07e-36 136
Msa1367790 MtrunA17_Chr5g0420881 42.361 144 81 1 217 358 1 144 1.09e-36 130
Msa1367790 MtrunA17_Chr3g0093751 32.143 308 195 8 56 358 56 354 1.76e-36 135
Msa1367790 MtrunA17_Chr8g0358941 31.164 292 175 10 56 333 27 306 3.10e-36 134
Msa1367790 MtrunA17_Chr1g0167961 29.747 316 197 10 56 358 69 372 3.97e-36 134
Msa1367790 MtrunA17_Chr1g0148771 32.841 271 163 7 56 324 63 316 4.63e-36 134
Msa1367790 MtrunA17_Chr1g0191201 29.667 300 190 7 44 328 41 334 6.87e-36 134
Msa1367790 MtrunA17_Chr8g0336631 29.412 289 183 7 56 333 60 338 7.85e-36 134
Msa1367790 MtrunA17_Chr1g0187811 28.475 295 190 7 50 333 182 466 1.42e-35 135
Msa1367790 MtrunA17_Chr3g0130391 29.245 318 208 8 45 351 55 366 1.49e-35 133
Msa1367790 MtrunA17_Chr8g0364471 27.273 308 209 8 50 349 61 361 1.57e-35 133
Msa1367790 MtrunA17_Chr7g0225881 30.492 305 191 11 49 342 60 354 2.84e-35 132
Msa1367790 MtrunA17_Chr8g0384461 27.414 321 212 8 22 332 19 328 3.10e-35 132
Msa1367790 MtrunA17_Chr1g0184241 29.530 298 196 8 50 342 63 351 4.65e-35 131
Msa1367790 MtrunA17_Chr7g0266651 30.345 290 189 7 50 333 53 335 2.52e-34 129
Msa1367790 MtrunA17_Chr4g0053251 30.070 286 178 8 56 321 8 291 3.38e-34 128
Msa1367790 MtrunA17_Chr6g0472861 28.571 294 193 9 50 335 64 348 6.43e-34 129
Msa1367790 MtrunA17_Chr1g0167911 30.116 259 164 7 56 308 54 301 7.85e-34 128
Msa1367790 MtrunA17_Chr4g0055591 28.333 300 198 7 56 349 61 349 8.35e-34 128
Msa1367790 MtrunA17_Chr7g0235981 29.286 280 176 6 91 358 58 327 1.02e-33 127
Msa1367790 MtrunA17_Chr2g0311861 29.545 308 179 9 56 355 64 341 1.24e-33 127
Msa1367790 MtrunA17_Chr1g0161111 32.333 300 190 8 56 350 132 423 4.31e-33 127
Msa1367790 MtrunA17_Chr8g0384481 29.154 319 207 9 50 358 53 362 9.28e-33 125
Msa1367790 MtrunA17_Chr1g0161081 31.000 300 194 8 56 350 73 364 1.03e-32 125
Msa1367790 MtrunA17_Chr1g0161041 31.126 302 191 9 56 350 96 387 1.28e-32 125
Msa1367790 MtrunA17_Chr4g0011311 30.980 255 165 6 50 302 61 306 1.31e-32 124
Msa1367790 MtrunA17_Chr7g0236011 30.769 312 193 8 50 349 61 361 2.69e-32 124
Msa1367790 MtrunA17_Chr2g0313111 28.912 294 189 9 44 330 16 296 2.12e-31 120
Msa1367790 MtrunA17_Chr7g0247991 28.115 313 202 8 50 350 61 362 2.47e-31 121
Msa1367790 MtrunA17_Chr2g0285931 28.523 298 189 10 49 333 20 306 1.17e-30 119
Msa1367790 MtrunA17_Chr4g0004061 30.392 306 193 12 56 351 9 304 1.91e-30 118
Msa1367790 MtrunA17_Chr8g0335411 28.438 320 211 9 50 358 61 373 3.85e-30 118
Msa1367790 MtrunA17_Chr5g0394071 36.313 179 98 5 174 351 5 168 4.34e-30 113
Msa1367790 MtrunA17_Chr1g0167951 28.897 263 170 6 52 308 49 300 4.67e-30 117
Msa1367790 MtrunA17_Chr3g0092531 31.229 301 182 12 56 348 6 289 9.89e-30 116
Msa1367790 MtrunA17_Chr4g0075471 40.517 116 69 0 209 324 21 136 1.35e-28 108
Msa1367790 MtrunA17_Chr3g0126761 34.503 171 108 4 171 340 44 211 1.49e-28 111
Msa1367790 MtrunA17_Chr7g0233661 38.562 153 81 3 199 351 3 142 4.63e-28 107
Msa1367790 MtrunA17_Chr1g0170631 32.642 193 122 5 171 358 3 192 1.20e-27 107
Msa1367790 MtrunA17_Chr3g0138351 30.293 307 192 13 52 343 3 302 2.30e-27 109
Msa1367790 MtrunA17_Chr4g0068891 28.669 293 178 9 56 334 20 295 2.55e-27 109
Msa1367790 MtrunA17_Chr4g0066991 27.508 309 183 9 52 349 63 341 5.29e-27 109
Msa1367790 MtrunA17_Chr8g0375661 40.833 120 69 1 54 171 50 169 1.08e-26 104
Msa1367790 MtrunA17_Chr8g0375641 41.667 120 68 1 54 171 50 169 1.15e-26 104
Msa1367790 MtrunA17_Chr4g0009541 28.667 300 204 9 53 345 4 300 1.69e-26 107
Msa1367790 MtrunA17_Chr1g0167931 27.152 302 161 9 56 348 54 305 2.25e-26 107
Msa1367790 MtrunA17_Chr6g0486831 30.195 308 183 12 57 335 11 315 3.60e-26 107
Msa1367790 MtrunA17_Chr8g0362741 30.472 233 141 6 50 281 61 273 6.66e-26 105
Msa1367790 MtrunA17_Chr8g0348951 29.514 288 183 10 56 334 10 286 8.08e-26 105
Msa1367790 MtrunA17_Chr3g0105281 28.571 266 163 6 56 311 34 282 2.89e-25 104
Msa1367790 MtrunA17_Chr4g0004071 28.754 313 204 12 48 351 1 303 5.37e-25 103
Msa1367790 MtrunA17_Chr4g0055911 28.000 325 210 13 48 356 1 317 9.05e-24 100
Msa1367790 MtrunA17_Chr7g0256741 27.273 308 196 11 56 350 10 302 1.53e-23 99.4
Msa1367790 MtrunA17_Chr4g0009561 27.653 311 212 9 51 351 2 309 2.00e-23 99.0
Msa1367790 MtrunA17_Chr4g0037611 38.843 121 71 3 192 311 12 130 8.72e-23 94.0
Msa1367790 MtrunA17_Chr7g0247741 27.974 311 201 12 50 351 5 301 3.51e-22 95.5
Msa1367790 MtrunA17_Chr4g0052251 25.769 260 178 10 79 328 45 299 2.23e-21 93.6
Msa1367790 MtrunA17_Chr1g0158011 28.112 249 154 9 102 344 10 239 3.71e-21 91.7
Msa1367790 MtrunA17_Chr4g0055871 27.152 302 197 11 48 337 1 291 9.24e-21 91.7
Msa1367790 MtrunA17_Chr1g0194321 25.503 298 193 9 56 334 20 307 2.81e-20 90.5
Msa1367790 MtrunA17_Chr5g0420891 31.902 163 101 3 11 171 5 159 9.45e-20 85.5
Msa1367790 MtrunA17_Chr8g0389941 28.082 292 186 11 77 348 51 338 1.01e-19 89.0
Msa1367790 MtrunA17_Chr8g0336801 31.126 151 98 3 213 358 7 156 1.14e-19 84.7
Msa1367790 MtrunA17_Chr8g0364171 36.937 111 68 2 171 281 18 126 2.56e-19 83.6
Msa1367790 MtrunA17_Chr5g0407781 27.208 283 186 6 56 334 5 271 3.26e-19 86.7
Msa1367790 MtrunA17_Chr8g0375591 37.879 132 77 2 9 138 2 130 4.14e-19 82.4
Msa1367790 MtrunA17_Chr8g0375581 43.678 87 46 1 191 277 2 85 4.52e-19 80.9
Msa1367790 MtrunA17_Chr2g0319521 34.513 113 72 2 169 281 14 124 2.19e-18 80.9
Msa1367790 MtrunA17_Chr3g0092581 36.970 165 91 8 187 348 7 161 2.40e-18 82.0
Msa1367790 MtrunA17_Chr1g0158021 30.131 229 141 8 52 273 45 261 7.62e-18 82.4
Msa1367790 MtrunA17_Chr2g0293931 30.857 175 106 6 172 334 8 179 8.22e-17 78.2
Msa1367790 MtrunA17_Chr8g0336871 30.303 165 102 5 183 342 2 158 1.72e-16 76.6
Msa1367790 MtrunA17_Chr1g0148781 29.688 192 127 7 162 349 121 308 5.06e-16 78.2
Msa1367790 MtrunA17_Chr8g0336831 27.513 189 128 5 56 240 60 243 2.00e-15 75.1
Msa1367790 MtrunA17_Chr1g0158031 29.114 158 100 5 181 332 1 152 1.21e-14 71.6
Msa1367790 MtrunA17_Chr7g0219991 36.893 103 63 1 174 276 251 351 3.51e-14 72.8
Msa1367790 MtrunA17_Chr2g0311611 47.222 72 30 2 217 281 1 71 4.36e-14 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1367790 AT5G20400.1 54.942 344 152 3 16 358 7 348 2.01e-135 390
Msa1367790 AT1G49390.1 53.488 344 157 3 16 358 7 348 3.21e-135 389
Msa1367790 AT5G20550.1 57.655 307 128 2 54 358 43 349 4.99e-131 379
Msa1367790 AT5G54000.2 51.009 347 162 5 16 358 7 349 9.05e-126 365
Msa1367790 AT1G49390.2 57.993 269 113 0 90 358 1 269 1.75e-119 346
Msa1367790 AT5G54000.1 54.275 269 123 0 90 358 1 269 7.80e-111 324
Msa1367790 AT3G21420.1 43.966 348 186 6 18 358 17 362 3.37e-87 268
Msa1367790 AT1G17020.1 36.288 361 221 5 3 358 2 358 7.09e-78 243
Msa1367790 AT4G25300.1 39.677 310 177 3 55 358 51 356 3.54e-76 239
Msa1367790 AT1G78550.1 40.000 305 180 2 56 358 53 356 4.14e-75 236
Msa1367790 AT2G38240.1 36.232 345 207 5 17 355 11 348 1.43e-74 234
Msa1367790 AT1G17010.1 36.311 347 212 4 17 358 16 358 2.39e-73 232
Msa1367790 AT4G25310.1 40.323 310 172 4 55 358 51 353 3.22e-72 229
Msa1367790 AT5G05600.1 36.688 308 186 4 55 355 61 366 7.86e-69 221
Msa1367790 AT1G78550.2 39.286 280 165 3 81 358 2 278 1.45e-65 209
Msa1367790 AT3G11180.2 37.370 289 176 3 49 335 88 373 1.62e-64 210
Msa1367790 AT3G11180.1 37.370 289 176 3 49 335 88 373 1.70e-64 210
Msa1367790 AT3G55970.1 35.762 302 186 5 56 351 52 351 8.82e-63 204
Msa1367790 AT5G08640.2 36.396 283 170 5 56 334 43 319 3.33e-60 197
Msa1367790 AT5G08640.1 36.396 283 170 5 56 334 43 319 3.33e-60 197
Msa1367790 AT4G22880.1 34.146 287 181 5 55 334 46 331 1.21e-59 196
Msa1367790 AT4G22880.2 34.146 287 181 5 55 334 46 331 1.21e-59 196
Msa1367790 AT4G22880.3 34.146 287 181 5 55 334 46 331 1.21e-59 196
Msa1367790 AT4G16330.2 36.482 307 176 8 56 355 67 361 1.95e-58 193
Msa1367790 AT4G10500.1 35.495 293 179 8 56 343 44 331 7.59e-56 186
Msa1367790 AT2G36690.2 33.828 337 209 8 16 348 19 345 1.62e-55 186
Msa1367790 AT2G36690.1 33.828 337 209 8 16 348 19 345 1.62e-55 186
Msa1367790 AT3G19010.1 37.705 305 170 9 47 336 20 319 3.63e-55 184
Msa1367790 AT3G19010.4 37.705 305 170 9 47 336 20 319 3.63e-55 184
Msa1367790 AT5G24530.1 33.634 333 187 9 37 348 4 323 7.43e-54 181
Msa1367790 AT5G05600.2 36.522 230 143 2 55 281 61 290 1.12e-52 176
Msa1367790 AT4G25310.2 36.275 306 162 5 55 358 51 325 2.51e-52 176
Msa1367790 AT3G60290.1 35.135 296 178 7 44 332 38 326 2.98e-52 177
Msa1367790 AT2G44800.1 35.125 279 169 6 52 325 48 319 3.10e-51 174
Msa1367790 AT4G16330.1 37.165 261 151 7 102 355 1 255 4.48e-50 168
Msa1367790 AT1G55290.1 34.713 314 188 9 52 358 58 361 6.63e-50 171
Msa1367790 AT4G10490.1 33.333 297 184 9 56 348 42 328 7.10e-49 168
Msa1367790 AT3G13610.1 34.069 317 190 10 50 358 56 361 7.46e-49 168
Msa1367790 AT1G62380.1 30.820 305 199 6 51 352 2 297 1.41e-48 166
Msa1367790 AT5G63590.1 32.997 297 179 7 52 336 10 298 1.52e-48 166
Msa1367790 AT5G07200.1 34.035 285 176 5 54 328 56 338 3.91e-48 167
Msa1367790 AT1G12010.1 31.190 311 201 7 51 357 2 303 4.21e-48 165
Msa1367790 AT1G15550.1 33.333 312 192 7 30 335 31 332 6.38e-48 166
Msa1367790 AT3G55970.2 34.632 231 146 3 56 281 52 282 2.34e-47 162
Msa1367790 AT3G19010.3 34.754 305 149 9 47 336 20 289 7.63e-47 162
Msa1367790 AT5G63600.1 30.137 292 192 6 52 340 29 311 1.88e-46 161
Msa1367790 AT1G05010.1 33.333 273 169 6 56 324 4 267 4.04e-46 160
Msa1367790 AT3G51240.1 31.959 291 189 8 56 342 38 323 4.61e-46 161
Msa1367790 AT1G60980.1 32.979 282 175 5 54 323 55 334 5.22e-46 161
Msa1367790 AT5G63600.2 30.034 293 192 7 52 340 29 312 2.01e-45 158
Msa1367790 AT1G77330.1 33.574 277 162 7 54 320 1 265 3.05e-45 157
Msa1367790 AT1G44090.1 31.949 313 202 6 47 351 54 363 9.04e-45 158
Msa1367790 AT5G07480.1 30.031 323 194 9 56 358 44 354 1.09e-44 157
Msa1367790 AT3G19000.1 34.688 320 179 10 30 333 16 321 3.32e-44 156
Msa1367790 AT5G63595.1 31.679 262 151 5 52 311 21 256 3.53e-43 151
Msa1367790 AT4G21200.1 31.475 305 184 7 29 318 3 297 3.55e-43 153
Msa1367790 AT4G25420.1 31.206 282 184 4 53 326 58 337 6.29e-43 153
Msa1367790 AT5G51810.1 30.662 287 187 4 53 332 60 341 7.87e-42 150
Msa1367790 AT3G19010.2 37.849 251 136 9 47 282 20 265 1.13e-41 147
Msa1367790 AT1G80340.1 31.515 330 198 10 30 348 28 340 1.94e-41 148
Msa1367790 AT1G80330.1 29.355 310 197 10 56 353 49 348 6.10e-41 147
Msa1367790 AT1G06620.1 33.459 266 161 6 49 308 55 310 6.74e-41 147
Msa1367790 AT5G43450.1 32.576 264 162 6 50 308 55 307 1.11e-40 147
Msa1367790 AT5G43935.1 31.206 282 157 8 56 329 19 271 1.49e-40 144
Msa1367790 AT5G43440.1 29.338 317 203 8 53 358 59 365 4.04e-40 145
Msa1367790 AT5G63580.2 33.898 236 146 5 49 281 12 240 4.30e-40 142
Msa1367790 AT4G25300.2 38.462 195 110 3 170 358 72 262 6.59e-40 142
Msa1367790 AT5G63580.1 34.188 234 144 5 49 279 12 238 7.66e-40 141
Msa1367790 AT5G59530.1 30.094 319 207 8 50 358 52 364 2.58e-39 143
Msa1367790 AT1G78440.1 31.034 290 174 9 56 332 18 294 6.00e-39 141
Msa1367790 AT2G30830.1 32.069 290 183 8 51 333 49 331 1.64e-38 141
Msa1367790 AT3G51240.2 32.083 240 157 5 105 342 4 239 2.08e-38 138
Msa1367790 AT1G06645.1 30.945 307 190 10 49 342 66 363 1.32e-37 139
Msa1367790 AT5G59540.1 28.852 305 200 8 50 344 55 352 1.72e-37 138
Msa1367790 AT3G12900.1 28.758 306 202 10 59 357 59 355 2.41e-37 138
Msa1367790 AT1G04380.1 31.679 262 162 6 52 308 41 290 2.55e-37 137
Msa1367790 AT3G61400.1 31.560 282 180 7 69 342 79 355 3.28e-37 137
Msa1367790 AT1G06640.1 29.904 311 191 10 49 342 53 353 4.09e-36 135
Msa1367790 AT1G03410.2 31.525 295 183 9 49 333 50 335 1.96e-35 133
Msa1367790 AT5G12270.1 29.022 317 198 8 56 358 56 359 2.60e-35 132
Msa1367790 AT1G03410.1 31.525 295 183 9 49 333 87 372 3.25e-35 133
Msa1367790 AT3G19000.2 34.701 268 145 10 30 281 16 269 3.41e-35 130
Msa1367790 AT2G19590.1 29.470 302 190 10 47 342 2 286 1.42e-34 129
Msa1367790 AT1G04350.1 28.972 321 204 10 50 358 52 360 2.08e-34 130
Msa1367790 AT5G07480.2 32.287 223 137 6 147 358 26 245 2.49e-34 127
Msa1367790 AT2G30840.1 30.855 269 175 7 47 310 48 310 2.49e-34 130
Msa1367790 AT1G06620.2 32.773 238 144 6 49 280 55 282 2.84e-34 128
Msa1367790 AT1G06650.2 30.000 300 187 10 56 342 64 353 6.30e-34 129
Msa1367790 AT5G43450.2 31.780 236 145 6 50 280 55 279 1.09e-33 126
Msa1367790 AT5G43440.2 30.085 236 151 5 53 283 59 285 1.06e-32 124
Msa1367790 AT4G21690.1 28.378 296 191 5 49 333 40 325 6.11e-32 123
Msa1367790 AT4G25420.2 30.380 237 155 4 53 281 58 292 8.71e-32 121
Msa1367790 AT3G49620.1 29.795 292 172 6 56 321 34 318 1.17e-31 122
Msa1367790 AT2G25450.1 28.767 292 195 7 49 333 48 333 1.92e-31 122
Msa1367790 AT1G04380.2 30.802 237 147 6 52 283 41 265 6.42e-31 118
Msa1367790 AT3G50210.4 28.966 290 182 8 56 321 8 297 7.14e-31 120
Msa1367790 AT3G50210.1 28.966 290 182 8 56 321 8 297 7.14e-31 120
Msa1367790 AT3G50210.3 28.966 290 182 8 56 321 8 297 7.14e-31 120
Msa1367790 AT2G30840.3 30.112 269 171 8 47 310 48 304 1.30e-30 119
Msa1367790 AT1G03400.1 29.655 290 186 7 49 333 49 325 6.28e-30 117
Msa1367790 AT1G06640.3 31.004 229 141 6 56 277 64 282 8.57e-30 116
Msa1367790 AT1G06640.2 30.603 232 144 6 56 280 64 285 1.41e-29 116
Msa1367790 AT5G51810.2 29.289 239 157 4 53 284 60 293 1.49e-29 115
Msa1367790 AT3G61400.2 32.093 215 139 4 69 281 79 288 2.23e-29 115
Msa1367790 AT2G19590.2 30.153 262 161 9 87 342 26 271 3.46e-29 114
Msa1367790 AT1G52820.1 29.412 323 211 10 41 357 1 312 3.59e-29 115
Msa1367790 AT5G59540.2 28.692 237 157 6 50 281 55 284 3.72e-29 114
Msa1367790 AT1G50960.1 27.037 270 185 6 52 317 36 297 5.84e-29 115
Msa1367790 AT3G49630.1 28.671 286 183 5 56 321 9 293 6.08e-29 114
Msa1367790 AT3G49630.3 28.938 273 182 4 60 321 18 289 2.60e-28 113
Msa1367790 AT1G06650.1 30.252 238 149 7 56 286 64 291 7.05e-28 111
Msa1367790 AT1G30040.1 26.871 294 196 8 48 333 23 305 1.35e-27 111
Msa1367790 AT2G30840.2 28.992 238 159 6 47 280 48 279 6.49e-27 108
Msa1367790 AT3G46500.5 28.966 290 175 12 58 319 11 297 8.81e-26 105
Msa1367790 AT3G46500.7 29.412 272 171 11 58 311 11 279 1.13e-24 102
Msa1367790 AT1G03400.2 27.044 318 186 8 49 333 49 353 1.42e-24 103
Msa1367790 AT2G34555.1 28.070 285 185 10 56 332 27 299 3.84e-24 101
Msa1367790 AT1G14130.1 27.740 292 181 6 56 337 9 280 6.33e-24 100
Msa1367790 AT1G47990.1 29.293 297 178 12 53 333 12 292 2.10e-22 96.7
Msa1367790 AT1G14120.2 26.761 284 194 5 56 337 8 279 1.58e-21 94.0
Msa1367790 AT1G14120.1 26.761 284 194 5 56 337 8 279 1.58e-21 94.0
Msa1367790 AT1G14120.3 26.761 284 194 5 56 337 8 279 1.58e-21 94.0
Msa1367790 AT5G51310.1 29.642 307 175 15 54 336 3 292 1.99e-21 94.0
Msa1367790 AT1G52800.1 25.243 309 201 9 56 350 10 302 3.90e-21 92.8
Msa1367790 AT3G47190.1 24.848 330 202 11 24 336 3 303 1.18e-20 92.0
Msa1367790 AT4G03070.1 27.439 328 206 16 47 358 5 316 3.00e-20 90.5
Msa1367790 AT5G58660.1 26.460 291 180 8 53 318 31 312 6.60e-20 90.1
Msa1367790 AT1G28030.1 26.433 314 214 10 50 353 7 313 6.81e-20 89.7
Msa1367790 AT3G50210.2 29.878 164 110 2 163 321 52 215 1.94e-19 87.0
Msa1367790 AT1G02400.1 25.342 292 201 9 50 332 18 301 7.11e-19 86.7
Msa1367790 AT3G46490.1 26.370 292 187 11 48 314 1 289 8.23e-19 86.7
Msa1367790 AT3G46490.2 26.573 286 182 11 48 308 1 283 2.48e-18 85.1
Msa1367790 AT3G49630.2 30.000 160 110 2 163 321 62 220 2.96e-18 84.0
Msa1367790 AT4G16765.6 32.240 183 112 6 163 335 50 230 1.05e-17 82.0
Msa1367790 AT4G16765.1 32.240 183 112 6 163 335 50 230 1.05e-17 82.0
Msa1367790 AT4G16765.2 32.240 183 112 6 163 335 50 230 1.05e-17 82.0
Msa1367790 AT1G30040.2 25.207 242 162 8 48 281 23 253 1.58e-17 82.0
Msa1367790 AT4G16765.3 32.778 180 109 6 163 332 50 227 3.01e-17 80.5
Msa1367790 AT3G46500.10 28.986 207 122 9 136 319 19 223 5.22e-17 80.1
Msa1367790 AT3G46500.1 28.986 207 122 9 136 319 19 223 5.22e-17 80.1
Msa1367790 AT1G35190.1 28.929 280 177 9 77 336 29 306 6.49e-17 81.3
Msa1367790 AT4G23340.1 27.500 320 190 15 51 350 5 302 2.11e-16 79.7
Msa1367790 AT1G35190.2 27.957 279 158 10 77 336 29 283 2.87e-16 79.0
Msa1367790 AT3G46500.3 29.630 189 118 8 136 311 19 205 3.80e-16 77.0
Msa1367790 AT3G46500.4 31.902 163 92 6 174 319 1 161 9.08e-16 75.1
Msa1367790 AT3G46500.6 33.562 146 88 5 173 311 31 174 1.92e-15 74.3
Msa1367790 AT3G46500.8 33.562 146 88 5 173 311 31 174 1.92e-15 74.3
Msa1367790 AT4G22870.1 34.884 86 55 1 250 334 2 87 8.84e-14 67.4
Msa1367790 AT3G46480.1 30.172 232 127 11 106 316 37 254 1.68e-13 70.5
Msa1367790 AT4G16765.5 35.455 110 64 3 231 335 77 184 6.45e-13 67.4
Msa1367790 AT4G03050.2 32.031 128 82 5 227 351 271 396 6.42e-12 66.6
Msa1367790 AT4G03050.1 32.031 128 82 5 227 351 271 396 6.42e-12 66.6
Msa1367790 AT4G16765.4 33.088 136 80 5 163 288 50 184 6.88e-12 63.9
Msa1367790 AT3G46500.2 28.916 166 104 7 136 288 19 183 8.12e-12 63.9
Msa1367790 AT4G23340.2 33.813 139 86 4 217 350 47 184 9.87e-12 63.9
Msa1367790 AT1G02400.2 23.438 256 180 8 50 297 18 265 4.02e-11 63.2
Msa1367790 AT3G46500.9 25.871 201 112 9 136 319 19 199 5.36e-11 62.4
Msa1367790 AT4G22870.2 33.333 78 51 1 258 334 51 128 8.43e-11 60.1

Find 80 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTTGGGGATTGTTTC+AGG 0.048302 tig0018557:+18027 Msa1367790:CDS
TTATTATCATGTTCCTTTAA+AGG 0.158034 tig0018557:-22313 Msa1367790:intergenic
TTAATCTCTTGTTCTGAATC+TGG 0.210279 tig0018557:-22002 Msa1367790:intergenic
ACATAACTATGATTAAATTT+TGG 0.220701 tig0018557:-22138 Msa1367790:intergenic
AACAATATACTGAAAGTTTA+AGG 0.224571 tig0018557:+21109 Msa1367790:CDS
TCATTGTAGATATAATTATT+TGG 0.229365 tig0018557:-17872 Msa1367790:intergenic
AATATTACCAACAGGGAAAA+AGG 0.234600 tig0018557:+22102 Msa1367790:CDS
TCCACTCTGCTCTCTCTTCT+TGG 0.263003 tig0018557:+18014 Msa1367790:CDS
AATTATATCTACAATGAATT+AGG 0.265397 tig0018557:+17878 Msa1367790:CDS
CAGAAAATCAAAAGCTTGAT+TGG 0.289170 tig0018557:+20634 Msa1367790:CDS
TTGAAATTCCTCCGATCTTC+CGG 0.305017 tig0018557:-20684 Msa1367790:intergenic
CCACTCTGCTCTCTCTTCTT+GGG 0.307569 tig0018557:+18015 Msa1367790:CDS
CCTATGCCTGATCATGTTCT+AGG 0.310348 tig0018557:+21255 Msa1367790:CDS
TTCACTGGTCTGTATAATAT+TGG 0.322104 tig0018557:-22056 Msa1367790:intergenic
CTCTCTCTCCACATTCCTTT+AGG 0.323173 tig0018557:-21194 Msa1367790:intergenic
GAATTTATACCTGAAATCAT+TGG 0.353550 tig0018557:-20724 Msa1367790:intergenic
ACGAGAGCATCAGGGATTAT+TGG 0.359276 tig0018557:-21378 Msa1367790:intergenic
ACATTAATCACGAGAGCATC+AGG 0.364504 tig0018557:-21387 Msa1367790:intergenic
CCAAACGGTATTGAAGGATA+TGG 0.374061 tig0018557:+20594 Msa1367790:CDS
CTTCTCGGAACTTTGTGAAA+TGG 0.394142 tig0018557:+22167 Msa1367790:three_prime_UTR
TAATCTCTTGTTCTGAATCT+GGG 0.407176 tig0018557:-22001 Msa1367790:intergenic
GATGGCAGAATCGGTGGGTT+CGG 0.415598 tig0018557:+17784 Msa1367790:exon
ATCGGAGGAATTTCAAACTT+TGG 0.417531 tig0018557:+20691 Msa1367790:CDS
AGTAGTGATAAATGAAGAAA+AGG 0.420128 tig0018557:+21950 Msa1367790:CDS
CCATATCCTTCAATACCGTT+TGG 0.420764 tig0018557:-20594 Msa1367790:intergenic
TCGGCAGAGGTTGATATAAT+CGG 0.433374 tig0018557:+17803 Msa1367790:CDS
AATTTATACCTGAAATCATT+GGG 0.433877 tig0018557:-20723 Msa1367790:intergenic
TAGTTATGTACAAGACTTCT+CGG 0.443612 tig0018557:+22152 Msa1367790:three_prime_UTR
AGTTCCTGCTGTGCTGTAGA+TGG 0.445982 tig0018557:-17983 Msa1367790:intergenic
CACTCTGCTCTCTCTTCTTG+GGG 0.449462 tig0018557:+18016 Msa1367790:CDS
TACAATGAATTAGGTGGTGT+TGG 0.450827 tig0018557:+17887 Msa1367790:CDS
AGTTTGGCAATGTCAACAAC+TGG 0.457707 tig0018557:-17953 Msa1367790:intergenic
CTGCAAGATAAAGAGGTAGA+AGG 0.474206 tig0018557:+21318 Msa1367790:CDS
GGAAGAGGATTGCTTCCTAA+AGG 0.484624 tig0018557:+21179 Msa1367790:CDS
TTTATCACTACTCTGTGTAC+TGG 0.484624 tig0018557:-21939 Msa1367790:intergenic
TTCTCCATCTACAGCACAGC+AGG 0.485461 tig0018557:+17979 Msa1367790:CDS
CATAGCAAAATCACTGAACT+TGG 0.489185 tig0018557:+21158 Msa1367790:CDS
AGTATATCTTAAGGTACATC+CGG 0.491418 tig0018557:+20665 Msa1367790:CDS
AGGGAGCCAAACGGTATTGA+AGG 0.498045 tig0018557:+20588 Msa1367790:CDS
AGAATCGGTGGGTTCGGCAG+AGG 0.505359 tig0018557:+17790 Msa1367790:CDS
GACTGATAGAGTATATCTTA+AGG 0.505600 tig0018557:+20656 Msa1367790:CDS
CTACTCTGTGTACTGGACTC+TGG 0.522493 tig0018557:-21932 Msa1367790:intergenic
TTTACGCCTAGAACATGATC+AGG 0.523560 tig0018557:-21261 Msa1367790:intergenic
AAGTTTAAGGCAGTTATATG+AGG 0.523916 tig0018557:+21122 Msa1367790:CDS
TGTAGATGGAGAAATGAGTT+TGG 0.524076 tig0018557:-17969 Msa1367790:intergenic
ATCAGTTCAAGAACTGTCGT+TGG 0.533223 tig0018557:+17832 Msa1367790:CDS
GGCGTAAAGCCACATGCTGA+TGG 0.536648 tig0018557:+21276 Msa1367790:CDS
GCAATTCTTTGAACTTCCAA+AGG 0.540464 tig0018557:+20545 Msa1367790:CDS
GCTTGTCTCTTGACAAAGTG+AGG 0.546684 tig0018557:+20511 Msa1367790:CDS
AAAATCACTGAACTTGGAAG+AGG 0.546943 tig0018557:+21164 Msa1367790:CDS
TAGAAAGATGGCAGAATCGG+TGG 0.547145 tig0018557:+17778 Msa1367790:exon
TAATGTTGGTGATCAAATAG+AGG 0.552527 tig0018557:+21404 Msa1367790:CDS
ATTGTGAAAATTCTGAGCTA+TGG 0.555268 tig0018557:+22224 Msa1367790:three_prime_UTR
TTAAGGTACATCCGGAAGAT+CGG 0.560715 tig0018557:+20673 Msa1367790:CDS
TTGTAGATATAATTATTTGG+TGG 0.579722 tig0018557:-17869 Msa1367790:intergenic
CCGTCCACTAGTCTGTCGAC+TGG 0.584898 tig0018557:-22026 Msa1367790:intergenic
CAGTCGACAGACTAGTGGAC+GGG 0.592554 tig0018557:+22027 Msa1367790:CDS
ACATGATCAGGCATAGGACA+TGG 0.597433 tig0018557:-21249 Msa1367790:intergenic
TATATCTACAATGAATTAGG+TGG 0.601026 tig0018557:+17881 Msa1367790:CDS
AGAAAGATGGCAGAATCGGT+GGG 0.601789 tig0018557:+17779 Msa1367790:exon
CTTGTCTCTTGACAAAGTGA+GGG 0.608187 tig0018557:+20512 Msa1367790:CDS
GATGCTCTCGTGATTAATGT+TGG 0.610796 tig0018557:+21390 Msa1367790:CDS
AAGTCCTAAAAGATAATCAG+TGG 0.615774 tig0018557:+21346 Msa1367790:CDS
AAATATGCAAGGGAGCCAAA+CGG 0.617288 tig0018557:+20579 Msa1367790:CDS
TGATAAATGAAGAAAAGGAA+AGG 0.617930 tig0018557:+21955 Msa1367790:CDS
GAGACAAGCTTGTCATACCA+TGG 0.626742 tig0018557:-20497 Msa1367790:intergenic
GATTGCTTCCTAAAGGAATG+TGG 0.631118 tig0018557:+21186 Msa1367790:CDS
CCTAGAACATGATCAGGCAT+AGG 0.638733 tig0018557:-21255 Msa1367790:intergenic
GTTACACAGATAATGAGCAA+TGG 0.639099 tig0018557:+21903 Msa1367790:intron
TAAACCAGTCGACAGACTAG+TGG 0.643978 tig0018557:+22022 Msa1367790:CDS
CATTAATCACGAGAGCATCA+GGG 0.648254 tig0018557:-21386 Msa1367790:intergenic
AGGTACATCCGGAAGATCGG+AGG 0.656707 tig0018557:+20676 Msa1367790:CDS
CCCAAGAAGAGAGAGCAGAG+TGG 0.660002 tig0018557:-18015 Msa1367790:intergenic
CCAGTCGACAGACTAGTGGA+CGG 0.661367 tig0018557:+22026 Msa1367790:CDS
ATAGATGATCCATCAGCATG+TGG 0.675560 tig0018557:-21285 Msa1367790:intergenic
ATATGAAGATCTGATTGTGA+AGG 0.677136 tig0018557:-17929 Msa1367790:intergenic
GATCAGGCATAGGACATGGA+GGG 0.679288 tig0018557:-21245 Msa1367790:intergenic
GTGATTCAGGCAATAAACCA+TGG 0.682925 tig0018557:+20480 Msa1367790:intron
TGATCAGGCATAGGACATGG+AGG 0.683082 tig0018557:-21246 Msa1367780:intergenic
TGAACAATTTACATACAGAG+AGG 0.738395 tig0018557:-17736 Msa1367780:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAAATCATAAC+AGG - tig0018557:19196-19215 Msa1367790:intergenic 10.0%
!! TCATTGTAGATATAATTATT+TGG - tig0018557:17875-17894 Msa1367790:intergenic 15.0%
!! AATTATATCTACAATGAATT+AGG + tig0018557:17878-17897 Msa1367790:CDS 15.0%
!!! ATTCTAAAACTTTATTTGAT+GGG - tig0018557:18381-18400 Msa1367790:intergenic 15.0%
!!! TATTCTAAAACTTTATTTGA+TGG - tig0018557:18382-18401 Msa1367790:intergenic 15.0%
!! TAAACAAACTTATTTATGTT+TGG + tig0018557:18762-18781 Msa1367790:intron 15.0%
!! TTGAATGTAAATATTAGATA+TGG + tig0018557:20365-20384 Msa1367790:intron 15.0%
!! AAAGAATATTCATTGTTAAT+GGG - tig0018557:20766-20785 Msa1367790:intergenic 15.0%
!! AAAAGAATATTCATTGTTAA+TGG - tig0018557:20767-20786 Msa1367790:intergenic 15.0%
!!! ACATAACTATGATTAAATTT+TGG - tig0018557:22141-22160 Msa1367790:intergenic 15.0%
!! TTGTAGATATAATTATTTGG+TGG - tig0018557:17872-17891 Msa1367790:intergenic 20.0%
!! AAATAGAAAATATTAGCAGT+TGG - tig0018557:18075-18094 Msa1367790:intergenic 20.0%
!! ACTAAAATAGACATAACTAA+AGG + tig0018557:18821-18840 Msa1367790:intron 20.0%
!!! TTTTTTTTGGAGTTTGTTTT+AGG - tig0018557:19359-19378 Msa1367790:intergenic 20.0%
!!! ACAGTGCTTTTTTTTTTTTT+TGG - tig0018557:19372-19391 Msa1367790:intergenic 20.0%
!! TAAACAACAAACAAATCAAA+AGG + tig0018557:19815-19834 Msa1367790:intron 20.0%
!! TTAAATCACTAAATCATAAC+AGG - tig0018557:20277-20296 Msa1367790:intergenic 20.0%
!! GTGATTTAAATTAGAGAATA+CGG + tig0018557:20288-20307 Msa1367790:intron 20.0%
!!! ACTCTCAAATAATTTTTTTC+TGG + tig0018557:20412-20431 Msa1367790:intron 20.0%
!!! AATTTTTTTCTGGTACATAT+TGG + tig0018557:20422-20441 Msa1367790:intron 20.0%
!! AATTTATACCTGAAATCATT+GGG - tig0018557:20726-20745 Msa1367790:intergenic 20.0%
!! ACAAAATTAGTAGATTTGTA+GGG - tig0018557:20890-20909 Msa1367790:intergenic 20.0%
!! AACAAAATTAGTAGATTTGT+AGG - tig0018557:20891-20910 Msa1367790:intergenic 20.0%
!! TAGAGAAAATAATTGTGTAA+CGG - tig0018557:21045-21064 Msa1367790:intergenic 20.0%
!! AACAATATACTGAAAGTTTA+AGG + tig0018557:21109-21128 Msa1367790:CDS 20.0%
!!! TTGTTATTTTCACTTTTTTG+TGG + tig0018557:21613-21632 Msa1367790:intron 20.0%
!! TATATCATAGATATAAGCTT+TGG - tig0018557:21844-21863 Msa1367790:intergenic 20.0%
!! ATCTATGATATATAACTGAT+AGG + tig0018557:21852-21871 Msa1367790:intron 20.0%
!!! ATATTTTCAATATTACCAAC+AGG + tig0018557:22094-22113 Msa1367790:CDS 20.0%
!!! TATTTTCAATATTACCAACA+GGG + tig0018557:22095-22114 Msa1367790:CDS 20.0%
!!! CTTTAAAGGATTTATGTTTT+TGG - tig0018557:22302-22321 Msa1367790:intergenic 20.0%
!! CAAAAACATAAATCCTTTAA+AGG + tig0018557:22300-22319 Msa1367790:three_prime_UTR 20.0%
!! TTATTATCATGTTCCTTTAA+AGG - tig0018557:22316-22335 Msa1367790:intergenic 20.0%
! TATATCTACAATGAATTAGG+TGG + tig0018557:17881-17900 Msa1367790:CDS 25.0%
! ATACTATCTTCTAAGTTAAG+AGG - tig0018557:18130-18149 Msa1367790:intergenic 25.0%
! TTAACTTAGAAGATAGTATC+AGG + tig0018557:18131-18150 Msa1367790:intron 25.0%
! ATCAGGATTGTAATTATGAT+CGG + tig0018557:18148-18167 Msa1367790:intron 25.0%
!!! TATTAAGTTTTGATGCAATC+AGG + tig0018557:18353-18372 Msa1367790:intron 25.0%
!!! AACCATTTTTTGACAACTTT+TGG + tig0018557:18455-18474 Msa1367790:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - tig0018557:18540-18559 Msa1367790:intergenic 25.0%
!! TGAGAGAATTGATTTATGTT+TGG + tig0018557:18718-18737 Msa1367790:intron 25.0%
! TAAAGGAGAATTGATAAAGA+AGG + tig0018557:18838-18857 Msa1367790:intron 25.0%
! TAAAGAAGGAGAATTGATAA+AGG + tig0018557:18852-18871 Msa1367790:intron 25.0%
! AAAGAAGGAGAATTGATAAA+GGG + tig0018557:18853-18872 Msa1367790:intron 25.0%
!!! TTTTTGGCTAGAATTGTTTT+TGG + tig0018557:19025-19044 Msa1367790:intron 25.0%
! CTCTAATACAACTATACTTA+GGG - tig0018557:19098-19117 Msa1367790:intergenic 25.0%
! TCTCTAATACAACTATACTT+AGG - tig0018557:19099-19118 Msa1367790:intergenic 25.0%
! GACAGATAAAATATACAAAG+TGG - tig0018557:19174-19193 Msa1367790:intergenic 25.0%
! ACTATAATACCAAATTAGCA+GGG + tig0018557:19640-19659 Msa1367790:intron 25.0%
!!! AATCTTTGTTTGACTTGATT+TGG - tig0018557:19698-19717 Msa1367790:intergenic 25.0%
! ATACGGTATAATCTGTTATT+TGG + tig0018557:20305-20324 Msa1367790:intron 25.0%
! AATATTTACATTCAACTTCG+TGG - tig0018557:20360-20379 Msa1367790:intergenic 25.0%
! AAAATAATTAGGAACCTCAT+TGG - tig0018557:20458-20477 Msa1367790:intergenic 25.0%
! CTGAATCACACAAAATAATT+AGG - tig0018557:20469-20488 Msa1367790:intergenic 25.0%
!!! CTAATTATTTTGTGTGATTC+AGG + tig0018557:20467-20486 Msa1367790:intron 25.0%
!!! TATTTTTGCTTTTCTTCCTT+TGG - tig0018557:20564-20583 Msa1367790:intergenic 25.0%
! AAGAAAAGCAAAAATATGCA+AGG + tig0018557:20568-20587 Msa1367790:CDS 25.0%
! AGAAAAGCAAAAATATGCAA+GGG + tig0018557:20569-20588 Msa1367790:CDS 25.0%
! GAATTTATACCTGAAATCAT+TGG - tig0018557:20727-20746 Msa1367790:intergenic 25.0%
!!! AACGTACAATTTTTTGTCAT+TGG + tig0018557:20954-20973 Msa1367790:intron 25.0%
! AATATCTAAGAGTTTGAACT+CGG - tig0018557:20999-21018 Msa1367790:intergenic 25.0%
! ATATATTTCATGTTCAATGC+AGG + tig0018557:21076-21095 Msa1367790:intron 25.0%
!!! TAAACCACTGATTATCTTTT+AGG - tig0018557:21353-21372 Msa1367790:intergenic 25.0%
! GAAGATAAAAACAGAAAACA+CGG - tig0018557:21492-21511 Msa1367790:intergenic 25.0%
! AGTAGTGATAAATGAAGAAA+AGG + tig0018557:21950-21969 Msa1367790:CDS 25.0%
! TGATAAATGAAGAAAAGGAA+AGG + tig0018557:21955-21974 Msa1367790:CDS 25.0%
!! AAATCAACATAGTTTTTCAC+TGG - tig0018557:22074-22093 Msa1367790:intergenic 25.0%
!!! TAAATTTTGGAAGCTTCAAT+TGG - tig0018557:22128-22147 Msa1367790:intergenic 25.0%
TGAACAATTTACATACAGAG+AGG - tig0018557:17739-17758 Msa0017880:intergenic 30.0%
!!! CATCATCAGTTTTAGAAAGA+TGG + tig0018557:17766-17785 Msa1367790:exon 30.0%
!! TTTTAGAAAGATGGCAGAAT+CGG + tig0018557:17775-17794 Msa1367790:exon 30.0%
ATATGAAGATCTGATTGTGA+AGG - tig0018557:17932-17951 Msa1367790:intergenic 30.0%
!! TAGTTTGTTTGTTGTTTACG+AGG + tig0018557:18200-18219 Msa1367790:intron 30.0%
GTCCAAAAGTTGTCAAAAAA+TGG - tig0018557:18460-18479 Msa1367790:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - tig0018557:18527-18546 Msa1367790:intergenic 30.0%
!! TCGTTTTTCTCACTTCTTAT+TGG - tig0018557:18553-18572 Msa1367790:intergenic 30.0%
AATAAGAAGTGAGAAAAACG+AGG + tig0018557:18552-18571 Msa1367790:intron 30.0%
TCAACAAAGTTGTCATCAAA+TGG + tig0018557:18578-18597 Msa1367790:intron 30.0%
TAAACATTGAAGTGTGTGTT+TGG + tig0018557:18626-18645 Msa1367790:intron 30.0%
GAATTGATAAAGGGCAATAA+AGG + tig0018557:18862-18881 Msa1367790:intron 30.0%
GGGCAATAAAGGAAAATAAT+AGG + tig0018557:18873-18892 Msa1367790:intron 30.0%
CAAAGTGGACATTAGTTATA+AGG - tig0018557:19159-19178 Msa1367790:intergenic 30.0%
!!! TTTTTGGAGTTTGTTTTAGG+TGG - tig0018557:19356-19375 Msa1367790:intergenic 30.0%
!!! TTTGACTCAAGTTGGTTTTT+GGG - tig0018557:19577-19596 Msa1367790:intergenic 30.0%
!! ATCATTTTTGATTCGAGATC+GGG - tig0018557:19609-19628 Msa1367790:intergenic 30.0%
!! GATCATTTTTGATTCGAGAT+CGG - tig0018557:19610-19629 Msa1367790:intergenic 30.0%
GATCTCGAATCAAAAATGAT+CGG + tig0018557:19609-19628 Msa1367790:intron 30.0%
AATTTGGTATTATAGTCTGG+TGG - tig0018557:19636-19655 Msa1367790:intergenic 30.0%
GCTAATTTGGTATTATAGTC+TGG - tig0018557:19639-19658 Msa1367790:intergenic 30.0%
GACTATAATACCAAATTAGC+AGG + tig0018557:19639-19658 Msa1367790:intron 30.0%
!!! ACTTGATTTGGTTTTTTCTC+TGG - tig0018557:19686-19705 Msa1367790:intergenic 30.0%
AATATGTAAGACGAAAGACA+TGG + tig0018557:19781-19800 Msa1367790:intron 30.0%
CAACACAAACATAAATCTAG+AGG + tig0018557:20170-20189 Msa1367790:intron 30.0%
AATCACTAAATCATAACAGG+CGG - tig0018557:20274-20293 Msa1367790:intergenic 30.0%
TATTTGAGAGTAGCATTCTT+GGG - tig0018557:20403-20422 Msa1367790:intergenic 30.0%
TTATTTGAGAGTAGCATTCT+TGG - tig0018557:20404-20423 Msa1367790:intergenic 30.0%
!!! TTTTTTCTGGTACATATTGG+TGG + tig0018557:20425-20444 Msa1367790:intron 30.0%
CAGAAAATCAAAAGCTTGAT+TGG + tig0018557:20634-20653 Msa1367790:CDS 30.0%
GACTGATAGAGTATATCTTA+AGG + tig0018557:20656-20675 Msa1367790:CDS 30.0%
AGTATATCTTAAGGTACATC+CGG + tig0018557:20665-20684 Msa1367790:CDS 30.0%
TATTTAATAACTCCACCGAA+AGG + tig0018557:20812-20831 Msa1367790:intron 30.0%
CAAAAAATTGTACGTTTGCA+AGG - tig0018557:20950-20969 Msa1367790:intergenic 30.0%
AAATAATTGTGTAACGGTCA+TGG - tig0018557:21039-21058 Msa1367790:intergenic 30.0%
! AAGTTTAAGGCAGTTATATG+AGG + tig0018557:21122-21141 Msa1367790:CDS 30.0%
!!! TTTTTTGCTGCAAGATAAAG+AGG + tig0018557:21311-21330 Msa1367790:CDS 30.0%
!!! GATTATCTTTTAGGACTTGA+AGG - tig0018557:21344-21363 Msa1367790:intergenic 30.0%
AAGTCCTAAAAGATAATCAG+TGG + tig0018557:21346-21365 Msa1367790:CDS 30.0%
!! TAATGTTGGTGATCAAATAG+AGG + tig0018557:21404-21423 Msa1367790:CDS 30.0%
! TGTAGGTTTTTCATATTTGC+AGG - tig0018557:21720-21739 Msa1367790:intergenic 30.0%
AACCTACATCAACTAAATGT+TGG + tig0018557:21732-21751 Msa1367790:intron 30.0%
ACCTACATCAACTAAATGTT+GGG + tig0018557:21733-21752 Msa1367790:intron 30.0%
! TAATCTCTTGTTCTGAATCT+GGG - tig0018557:22004-22023 Msa1367790:intergenic 30.0%
! TTAATCTCTTGTTCTGAATC+TGG - tig0018557:22005-22024 Msa1367790:intergenic 30.0%
! TTCACTGGTCTGTATAATAT+TGG - tig0018557:22059-22078 Msa1367790:intergenic 30.0%
AATATTACCAACAGGGAAAA+AGG + tig0018557:22102-22121 Msa1367790:CDS 30.0%
TAGTTATGTACAAGACTTCT+CGG + tig0018557:22152-22171 Msa1367790:three_prime_UTR 30.0%
ATTGTGAAAATTCTGAGCTA+TGG + tig0018557:22224-22243 Msa1367790:three_prime_UTR 30.0%
TACAATGAATTAGGTGGTGT+TGG + tig0018557:17887-17906 Msa1367790:CDS 35.0%
TGTAGATGGAGAAATGAGTT+TGG - tig0018557:17972-17991 Msa1367790:intergenic 35.0%
TTAAATCTAGACTGTCCGAT+CGG - tig0018557:18315-18334 Msa1367790:intergenic 35.0%
! CTGATAGAATTGATTCTGAC+AGG + tig0018557:18687-18706 Msa1367790:intron 35.0%
! GCTTCATAGAGAATTGCTTT+TGG + tig0018557:18965-18984 Msa1367790:intron 35.0%
!! TCATAGAGAATTGCTTTTGG+AGG + tig0018557:18968-18987 Msa1367790:intron 35.0%
ATTCTAGCCAAAAACGTGTT+TGG - tig0018557:19019-19038 Msa1367790:intergenic 35.0%
TATAAGGTTAAGACGCATGA+GGG - tig0018557:19143-19162 Msa1367790:intergenic 35.0%
TTATAAGGTTAAGACGCATG+AGG - tig0018557:19144-19163 Msa1367790:intergenic 35.0%
TGGACGAAACAAGATACAAA+TGG + tig0018557:19260-19279 Msa1367790:intron 35.0%
!!! TTATCTTCAGGGGTGTTTTT+AGG - tig0018557:19315-19334 Msa1367790:intergenic 35.0%
!! TTTTGGAGGGTTTATCTTCA+GGG - tig0018557:19326-19345 Msa1367790:intergenic 35.0%
!! TTTTAGGTGGTGATGTGTTT+TGG - tig0018557:19343-19362 Msa1367790:intergenic 35.0%
!!! ATTTTGAGGGTGTTCTTTGT+GGG - tig0018557:19432-19451 Msa1367790:intergenic 35.0%
!!! TATTTTGAGGGTGTTCTTTG+TGG - tig0018557:19433-19452 Msa1367790:intergenic 35.0%
!!! GTCTGGGAGTTTTATTTTGA+GGG - tig0018557:19445-19464 Msa1367790:intergenic 35.0%
!!! CTTTGACTCAAGTTGGTTTT+TGG - tig0018557:19578-19597 Msa1367790:intergenic 35.0%
!!! ACATATTGTGTGCTGGTTTT+CGG - tig0018557:19768-19787 Msa1367790:intergenic 35.0%
GTTTAGGTGTTTACAGAGTT+TGG - tig0018557:19872-19891 Msa1367790:intergenic 35.0%
!! AGCTCTTGTTTGTGCTTTTT+GGG - tig0018557:19897-19916 Msa1367790:intergenic 35.0%
!! TAGCTCTTGTTTGTGCTTTT+TGG - tig0018557:19898-19917 Msa1367790:intergenic 35.0%
! TTGTGTTGTTGCTTGTTTCT+TGG - tig0018557:20158-20177 Msa1367790:intergenic 35.0%
CGAAATCCAACAACAAAACA+CGG + tig0018557:20197-20216 Msa1367790:intron 35.0%
GAAATCCAACAACAAAACAC+GGG + tig0018557:20198-20217 Msa1367790:intron 35.0%
GCAATTCTTTGAACTTCCAA+AGG + tig0018557:20545-20564 Msa1367790:CDS 35.0%
ATCGGAGGAATTTCAAACTT+TGG + tig0018557:20691-20710 Msa1367790:CDS 35.0%
! CTGAAATCATTGGGTTTTTG+GGG - tig0018557:20717-20736 Msa1367790:intergenic 35.0%
! CCTGAAATCATTGGGTTTTT+GGG - tig0018557:20718-20737 Msa1367790:intergenic 35.0%
! ACCTGAAATCATTGGGTTTT+TGG - tig0018557:20719-20738 Msa1367790:intergenic 35.0%
CATTGTTAATGGGAACTTAG+TGG - tig0018557:20756-20775 Msa1367790:intergenic 35.0%
! CAAGTTCAGTGATTTTGCTA+TGG - tig0018557:21160-21179 Msa1367790:intergenic 35.0%
CATAGCAAAATCACTGAACT+TGG + tig0018557:21158-21177 Msa1367790:CDS 35.0%
AAAATCACTGAACTTGGAAG+AGG + tig0018557:21164-21183 Msa1367790:CDS 35.0%
GTGGTATTTGCATATGTTCA+CGG + tig0018557:21632-21651 Msa1367790:intron 35.0%
GCTATTTGTCATATTGTGTG+TGG - tig0018557:21794-21813 Msa1367790:intergenic 35.0%
! CATAGATATAAGCTTTGGTG+TGG - tig0018557:21839-21858 Msa1367790:intergenic 35.0%
! GTAACACATTCAAGTTCAAC+AGG - tig0018557:21888-21907 Msa1367790:intergenic 35.0%
GTTACACAGATAATGAGCAA+TGG + tig0018557:21903-21922 Msa1367790:intron 35.0%
TTTATCACTACTCTGTGTAC+TGG - tig0018557:21942-21961 Msa1367790:intergenic 35.0%
!! TCGGCAGAGGTTGATATAAT+CGG + tig0018557:17803-17822 Msa1367790:CDS 40.0%
ATCAGTTCAAGAACTGTCGT+TGG + tig0018557:17832-17851 Msa1367790:CDS 40.0%
AGTTTGGCAATGTCAACAAC+TGG - tig0018557:17956-17975 Msa1367790:intergenic 40.0%
AGAGAGAAAAAGGAAGAGAG+GGG - tig0018557:18517-18536 Msa1367790:intergenic 40.0%
GAGAGAGAAAAAGGAAGAGA+GGG - tig0018557:18518-18537 Msa1367790:intergenic 40.0%
! AGCCAAACCAAACACGTTTT+TGG + tig0018557:19009-19028 Msa1367790:intron 40.0%
AGCCAAAAACGTGTTTGGTT+TGG - tig0018557:19014-19033 Msa1367790:intergenic 40.0%
! GCACTGTAGAGAATTGCTTT+TGG + tig0018557:19047-19066 Msa1367790:intron 40.0%
!! TGTAGAGAATTGCTTTTGGC+TGG + tig0018557:19051-19070 Msa1367790:intron 40.0%
!! GTAGAGAATTGCTTTTGGCT+GGG + tig0018557:19052-19071 Msa1367790:intron 40.0%
AACTATACTTAGGGCCTGTT+TGG - tig0018557:19089-19108 Msa1367790:intergenic 40.0%
TATGGTGTACCGTCTATATG+CGG - tig0018557:19288-19307 Msa1367790:intergenic 40.0%
TTTGGAGGGTTTATCTTCAG+GGG - tig0018557:19325-19344 Msa1367790:intergenic 40.0%
!!! GTTTTGGAGGGTTTATCTTC+AGG - tig0018557:19327-19346 Msa1367790:intergenic 40.0%
!!! GGTCTGGGAGTTTTATTTTG+AGG - tig0018557:19446-19465 Msa1367790:intergenic 40.0%
ATAGCTGCATGATCCTTCTT+CGG - tig0018557:19508-19527 Msa1367790:intergenic 40.0%
!!! TGGTTTTTTCTCTGGTGTAC+CGG - tig0018557:19678-19697 Msa1367790:intergenic 40.0%
! ATTCATTTGGCTTCGAGATC+GGG - tig0018557:19738-19757 Msa1367790:intergenic 40.0%
! GATTCATTTGGCTTCGAGAT+CGG - tig0018557:19739-19758 Msa1367790:intergenic 40.0%
GATCTCGAAGCCAAATGAAT+CGG + tig0018557:19738-19757 Msa1367790:intron 40.0%
TCGTCTTACATATTGTGTGC+TGG - tig0018557:19775-19794 Msa1367790:intergenic 40.0%
AGGTGTTTACAGAGTTTGGA+GGG - tig0018557:19868-19887 Msa1367790:intergenic 40.0%
TAGGTGTTTACAGAGTTTGG+AGG - tig0018557:19869-19888 Msa1367790:intergenic 40.0%
!!! TTGTGCTTTTTGGGTGGTTT+AGG - tig0018557:19888-19907 Msa1367790:intergenic 40.0%
!! TCTTGTTTGTGCTTTTTGGG+TGG - tig0018557:19894-19913 Msa1367790:intergenic 40.0%
TAGATGCAACCTCTGTTACA+CGG - tig0018557:19939-19958 Msa1367790:intergenic 40.0%
GTAACAGAGGTTGCATCTAA+AGG + tig0018557:19940-19959 Msa1367790:intron 40.0%
! GTTTCTTGGTGAGGATGTTT+TGG - tig0018557:20144-20163 Msa1367790:intergenic 40.0%
! TTGTTGCTTGTTTCTTGGTG+AGG - tig0018557:20153-20172 Msa1367790:intergenic 40.0%
! CCTTTTTATGATCTGGGTTG+TGG - tig0018557:20248-20267 Msa1367790:intergenic 40.0%
CCACAACCCAGATCATAAAA+AGG + tig0018557:20245-20264 Msa1367790:intron 40.0%
CAACCCAGATCATAAAAAGG+CGG + tig0018557:20248-20267 Msa1367790:intron 40.0%
GCATTCTTGGGTTTGTGAAA+AGG - tig0018557:20391-20410 Msa1367790:intergenic 40.0%
GTGATTCAGGCAATAAACCA+TGG + tig0018557:20480-20499 Msa1367790:intron 40.0%
CTTGTCTCTTGACAAAGTGA+GGG + tig0018557:20512-20531 Msa1367790:CDS 40.0%
AAATATGCAAGGGAGCCAAA+CGG + tig0018557:20579-20598 Msa1367790:CDS 40.0%
CCATATCCTTCAATACCGTT+TGG - tig0018557:20597-20616 Msa1367790:intergenic 40.0%
! CCAAACGGTATTGAAGGATA+TGG + tig0018557:20594-20613 Msa1367790:CDS 40.0%
TTAAGGTACATCCGGAAGAT+CGG + tig0018557:20673-20692 Msa1367790:CDS 40.0%
TTGAAATTCCTCCGATCTTC+CGG - tig0018557:20687-20706 Msa1367790:intergenic 40.0%
CCCAAAAACCCAATGATTTC+AGG + tig0018557:20715-20734 Msa1367790:CDS 40.0%
TGTTAATGGGAACTTAGTGG+AGG - tig0018557:20753-20772 Msa1367790:intergenic 40.0%
TCGAAGACAGCAAAACCTTT+CGG - tig0018557:20830-20849 Msa1367790:intergenic 40.0%
GATTGCTTCCTAAAGGAATG+TGG + tig0018557:21186-21205 Msa1367790:CDS 40.0%
TTTACGCCTAGAACATGATC+AGG - tig0018557:21264-21283 Msa1367790:intergenic 40.0%
ATAGATGATCCATCAGCATG+TGG - tig0018557:21288-21307 Msa1367790:intergenic 40.0%
CTGCAAGATAAAGAGGTAGA+AGG + tig0018557:21318-21337 Msa1367790:CDS 40.0%
!! CATTAATCACGAGAGCATCA+GGG - tig0018557:21389-21408 Msa1367790:intergenic 40.0%
!! ACATTAATCACGAGAGCATC+AGG - tig0018557:21390-21409 Msa1367790:intergenic 40.0%
GATGCTCTCGTGATTAATGT+TGG + tig0018557:21390-21409 Msa1367790:CDS 40.0%
!! GTTGGTGATCAAATAGAGGT+TGG + tig0018557:21408-21427 Msa1367790:intron 40.0%
CACGATAGTATCAGAGATGA+AGG - tig0018557:21531-21550 Msa1367790:intergenic 40.0%
CACGGCAAAAGTAGAAGAAT+CGG + tig0018557:21650-21669 Msa1367790:intron 40.0%
! GCCCAACATTTAGTTGATGT+AGG - tig0018557:21737-21756 Msa1367790:intergenic 40.0%
CTTCTCGGAACTTTGTGAAA+TGG + tig0018557:22167-22186 Msa1367790:three_prime_UTR 40.0%
TAGAAAGATGGCAGAATCGG+TGG + tig0018557:17778-17797 Msa1367790:exon 45.0%
AGAAAGATGGCAGAATCGGT+GGG + tig0018557:17779-17798 Msa1367790:exon 45.0%
CTCTTCTTGGGGATTGTTTC+AGG + tig0018557:18027-18046 Msa1367790:CDS 45.0%
! TTTACGAGGTATCAGCTCAG+TGG + tig0018557:18214-18233 Msa1367790:intron 45.0%
TACCGAGTTCAAATCCCCTT+TGG + tig0018557:18256-18275 Msa1367790:intron 45.0%
GTCCAAAGGGGATTTGAACT+CGG - tig0018557:18261-18280 Msa1367790:intergenic 45.0%
AGAACTGCTTGCAGTCCAAA+GGG - tig0018557:18274-18293 Msa1367790:intergenic 45.0%
AAGAACTGCTTGCAGTCCAA+AGG - tig0018557:18275-18294 Msa1367790:intergenic 45.0%
TTTGGACTGCAAGCAGTTCT+TGG + tig0018557:18274-18293 Msa1367790:intron 45.0%
!!! TGGGTGCATTTTTAGCCGAT+CGG + tig0018557:18297-18316 Msa1367790:intron 45.0%
GGAGAGAGAAAAAGGAAGAG+AGG - tig0018557:18519-18538 Msa1367790:intergenic 45.0%
!! CAAATGGTGCCGCATATAGA+CGG + tig0018557:19276-19295 Msa1367790:intron 45.0%
!!! GGGGTGTTTTTAGGTGGTTA+TGG - tig0018557:19306-19325 Msa1367790:intergenic 45.0%
!!! TCTTCAGGGGTGTTTTTAGG+TGG - tig0018557:19312-19331 Msa1367790:intergenic 45.0%
!! AGGTGGTGATGTGTTTTGGA+GGG - tig0018557:19339-19358 Msa1367790:intergenic 45.0%
!! TAGGTGGTGATGTGTTTTGG+AGG - tig0018557:19340-19359 Msa1367790:intergenic 45.0%
TGTGGGTGAGTAGTGACAAT+GGG - tig0018557:19415-19434 Msa1367790:intergenic 45.0%
TTGTGGGTGAGTAGTGACAA+TGG - tig0018557:19416-19435 Msa1367790:intergenic 45.0%
GTTAGGTGCTCTTCGAAATG+TGG - tig0018557:19486-19505 Msa1367790:intergenic 45.0%
TGCATGATCCTTCTTCGGTT+AGG - tig0018557:19503-19522 Msa1367790:intergenic 45.0%
TTTGTGTTGTGCTCTTTCGG+TGG - tig0018557:19553-19572 Msa1367790:intergenic 45.0%
! GGCTTTGTGTTGTGCTCTTT+CGG - tig0018557:19556-19575 Msa1367790:intergenic 45.0%
! GTCGGTTCTTTGACTCAAGT+TGG - tig0018557:19585-19604 Msa1367790:intergenic 45.0%
! TTTGATTCGAGATCGGGAGT+CGG - tig0018557:19603-19622 Msa1367790:intergenic 45.0%
!!! TTTTTTCTCTGGTGTACCGG+GGG - tig0018557:19675-19694 Msa1367790:intergenic 45.0%
!!! GTTTTTTCTCTGGTGTACCG+GGG - tig0018557:19676-19695 Msa1367790:intergenic 45.0%
!!! GGTTTTTTCTCTGGTGTACC+GGG - tig0018557:19677-19696 Msa1367790:intergenic 45.0%
!!! ATTGTGTGCTGGTTTTCGGT+GGG - tig0018557:19764-19783 Msa1367790:intergenic 45.0%
!!! TATTGTGTGCTGGTTTTCGG+TGG - tig0018557:19765-19784 Msa1367790:intergenic 45.0%
AGAGCTAGTGACAACGAACA+TGG + tig0018557:19911-19930 Msa1367790:intron 45.0%
AGATGCAACCTCTGTTACAC+GGG - tig0018557:19938-19957 Msa1367790:intergenic 45.0%
!! GGTGTTTTAAGTGAGGAGGT+GGG - tig0018557:19984-20003 Msa1367790:intergenic 45.0%
!! TGGTGTTTTAAGTGAGGAGG+TGG - tig0018557:19985-20004 Msa1367790:intergenic 45.0%
!! GGTTGGTGTTTTAAGTGAGG+AGG - tig0018557:19988-20007 Msa1367790:intergenic 45.0%
!! GGTGGTTGGTGTTTTAAGTG+AGG - tig0018557:19991-20010 Msa1367790:intergenic 45.0%
AGGCTATTCAATTGTGGTGG+GGG - tig0018557:20063-20082 Msa1367790:intergenic 45.0%
GAGGCTATTCAATTGTGGTG+GGG - tig0018557:20064-20083 Msa1367790:intergenic 45.0%
GGAGGCTATTCAATTGTGGT+GGG - tig0018557:20065-20084 Msa1367790:intergenic 45.0%
TGGAGGCTATTCAATTGTGG+TGG - tig0018557:20066-20085 Msa1367790:intergenic 45.0%
TGGTGGAGGCTATTCAATTG+TGG - tig0018557:20069-20088 Msa1367790:intergenic 45.0%
!! TCTTGGTGAGGATGTTTTGG+CGG - tig0018557:20141-20160 Msa1367790:intergenic 45.0%
GAGACAAGCTTGTCATACCA+TGG - tig0018557:20500-20519 Msa1367790:intergenic 45.0%
GCTTGTCTCTTGACAAAGTG+AGG + tig0018557:20511-20530 Msa1367790:CDS 45.0%
AAGACAGCAAAACCTTTCGG+TGG - tig0018557:20827-20846 Msa1367790:intergenic 45.0%
GGAAGAGGATTGCTTCCTAA+AGG + tig0018557:21179-21198 Msa1367790:CDS 45.0%
CTCTCTCTCCACATTCCTTT+AGG - tig0018557:21197-21216 Msa1367790:intergenic 45.0%
ACATGATCAGGCATAGGACA+TGG - tig0018557:21252-21271 Msa1367790:intergenic 45.0%
CCTAGAACATGATCAGGCAT+AGG - tig0018557:21258-21277 Msa1367790:intergenic 45.0%
CCTATGCCTGATCATGTTCT+AGG + tig0018557:21255-21274 Msa1367790:CDS 45.0%
!! ACGAGAGCATCAGGGATTAT+TGG - tig0018557:21381-21400 Msa1367790:intergenic 45.0%
TAAACCAGTCGACAGACTAG+TGG + tig0018557:22022-22041 Msa1367790:CDS 45.0%
!!! CAATTGGCCTTTTTCCCTGT+TGG - tig0018557:22112-22131 Msa1367790:intergenic 45.0%
!!! TATGATTTTTTTTTTTTAAT+CGG + tig0018557:19198-19217 Msa1367790:intron 5.0%
TTCTCCATCTACAGCACAGC+AGG + tig0018557:17979-17998 Msa1367790:CDS 50.0%
AGTTCCTGCTGTGCTGTAGA+TGG - tig0018557:17986-18005 Msa1367790:intergenic 50.0%
TCCACTCTGCTCTCTCTTCT+TGG + tig0018557:18014-18033 Msa1367790:CDS 50.0%
CCACTCTGCTCTCTCTTCTT+GGG + tig0018557:18015-18034 Msa1367790:CDS 50.0%
CACTCTGCTCTCTCTTCTTG+GGG + tig0018557:18016-18035 Msa1367790:CDS 50.0%
GAACTGCTTGCAGTCCAAAG+GGG - tig0018557:18273-18292 Msa1367790:intergenic 50.0%
GACTGCAAGCAGTTCTTGGT+GGG + tig0018557:18278-18297 Msa1367790:intron 50.0%
TCCATACATTGCGTCTTGCG+GGG - tig0018557:19244-19263 Msa1367790:intergenic 50.0%
GTCCATACATTGCGTCTTGC+GGG - tig0018557:19245-19264 Msa1367790:intergenic 50.0%
CGTCCATACATTGCGTCTTG+CGG - tig0018557:19246-19265 Msa1367790:intergenic 50.0%
TTCGAAATGTGGCCCAGCTT+GGG - tig0018557:19475-19494 Msa1367790:intergenic 50.0%
!! GAAGAGCACCTAACCGAAGA+AGG + tig0018557:19492-19511 Msa1367790:intron 50.0%
! TTTCGGTGGGCCGATTCATT+TGG - tig0018557:19751-19770 Msa1367790:intergenic 50.0%
AACATGGACCCGTGTAACAG+AGG + tig0018557:19927-19946 Msa1367790:intron 50.0%
! TGATGATGTGTGCTGGTGGT+TGG - tig0018557:20005-20024 Msa1367790:intergenic 50.0%
! CTATTCAATTGTGGTGGGGG+TGG - tig0018557:20060-20079 Msa1367790:intergenic 50.0%
!! TAGTGATGCAGTGATGGTGG+TGG - tig0018557:20116-20135 Msa1367790:intergenic 50.0%
GTTGTGGTTCCGCTTCAAAC+CGG - tig0018557:20232-20251 Msa1367790:intergenic 50.0%
! CGGCCGCCTTTTTATGATCT+GGG - tig0018557:20254-20273 Msa1367790:intergenic 50.0%
! TTGGTGGCTGAGTTCCAATG+AGG + tig0018557:20441-20460 Msa1367790:intron 50.0%
! AGGGAGCCAAACGGTATTGA+AGG + tig0018557:20588-20607 Msa1367790:CDS 50.0%
GATCAGGCATAGGACATGGA+GGG - tig0018557:21248-21267 Msa1367790:intergenic 50.0%
TGATCAGGCATAGGACATGG+AGG - tig0018557:21249-21268 Msa1367790:intergenic 50.0%
CTACTCTGTGTACTGGACTC+TGG - tig0018557:21935-21954 Msa1367790:intergenic 50.0%
! GATGGCAGAATCGGTGGGTT+CGG + tig0018557:17784-17803 Msa1367790:exon 55.0%
CCCAAGAAGAGAGAGCAGAG+TGG - tig0018557:18018-18037 Msa1367790:intergenic 55.0%
GGACTGCAAGCAGTTCTTGG+TGG + tig0018557:18277-18296 Msa1367790:intron 55.0%
GGGCAGAAGCTGAACCAAAC+AGG + tig0018557:19072-19091 Msa1367790:intron 55.0%
TCCCCGCAAGACGCAATGTA+TGG + tig0018557:19240-19259 Msa1367790:intron 55.0%
TGAGTAGTGACAATGGGCGG+TGG - tig0018557:19409-19428 Msa1367790:intergenic 55.0%
GGGTGAGTAGTGACAATGGG+CGG - tig0018557:19412-19431 Msa1367790:intergenic 55.0%
CTTCGAAATGTGGCCCAGCT+TGG - tig0018557:19476-19495 Msa1367790:intergenic 55.0%
GTGCTCTTTCGGTGGTTCAG+AGG - tig0018557:19545-19564 Msa1367790:intergenic 55.0%
TTGGCTTCGAGATCGGGAGT+CGG - tig0018557:19732-19751 Msa1367790:intergenic 55.0%
TGAGGAGGTGGGTGCTTGTT+GGG - tig0018557:19973-19992 Msa1367790:intergenic 55.0%
!! TGGTGGTGGTGAAGTGTGGT+GGG - tig0018557:20030-20049 Msa1367790:intergenic 55.0%
GCGTAGTGATGCAGTGATGG+TGG - tig0018557:20119-20138 Msa1367790:intergenic 55.0%
!! CGCTGCCCGTGTTTTGTTGT+TGG - tig0018557:20206-20225 Msa1367790:intergenic 55.0%
! GCGGCCGCCTTTTTATGATC+TGG - tig0018557:20255-20274 Msa1367790:intergenic 55.0%
AGGTACATCCGGAAGATCGG+AGG + tig0018557:20676-20695 Msa1367790:CDS 55.0%
GGCGTAAAGCCACATGCTGA+TGG + tig0018557:21276-21295 Msa1367790:CDS 55.0%
CCAGTCGACAGACTAGTGGA+CGG + tig0018557:22026-22045 Msa1367790:CDS 55.0%
! CAGTCGACAGACTAGTGGAC+GGG + tig0018557:22027-22046 Msa1367790:CDS 55.0%
! AGAATCGGTGGGTTCGGCAG+AGG + tig0018557:17790-17809 Msa1367790:CDS 60.0%
!! CAGCTTGGGTGTTGGGGTCT+GGG - tig0018557:19461-19480 Msa1367790:intergenic 60.0%
CAGACCCCAACACCCAAGCT+GGG + tig0018557:19460-19479 Msa1367790:intron 60.0%
TGTGGCCCAGCTTGGGTGTT+GGG - tig0018557:19468-19487 Msa1367790:intergenic 60.0%
ATGTGGCCCAGCTTGGGTGT+TGG - tig0018557:19469-19488 Msa1367790:intergenic 60.0%
!! CGAGGGGTGCCCTGCTAATT+TGG - tig0018557:19652-19671 Msa1367790:intergenic 60.0%
TGGCTTCGAGATCGGGAGTC+GGG - tig0018557:19731-19750 Msa1367790:intergenic 60.0%
! GAGGAGGTGGGTGCTTGTTG+GGG - tig0018557:19972-19991 Msa1367790:intergenic 60.0%
GTGAGGAGGTGGGTGCTTGT+TGG - tig0018557:19974-19993 Msa1367790:intergenic 60.0%
! GGGGTGATGATGTGTGCTGG+TGG - tig0018557:20009-20028 Msa1367790:intergenic 60.0%
! GTGGGGGTGATGATGTGTGC+TGG - tig0018557:20012-20031 Msa1367790:intergenic 60.0%
! GTGGTGGTGAAGTGTGGTGG+GGG - tig0018557:20028-20047 Msa1367790:intergenic 60.0%
! GGTGGTGGTGAAGTGTGGTG+GGG - tig0018557:20029-20048 Msa1367790:intergenic 60.0%
!! GTGGTGGTGGTGAAGTGTGG+TGG - tig0018557:20031-20050 Msa1367790:intergenic 60.0%
!! TGCGTGGTGGTGGTGAAGTG+TGG - tig0018557:20034-20053 Msa1367790:intergenic 60.0%
!! TGGTGATGCAGTGGTGGTGG+AGG - tig0018557:20083-20102 Msa1367790:intergenic 60.0%
!! GTGATGGTGGTGGTGTTGCG+CGG - tig0018557:20106-20125 Msa1367790:intergenic 60.0%
GCGGCGTAGTGATGCAGTGA+TGG - tig0018557:20122-20141 Msa1367790:intergenic 60.0%
! CCGTCCACTAGTCTGTCGAC+TGG - tig0018557:22029-22048 Msa1367790:intergenic 60.0%
!! CCAGCTTGGGTGTTGGGGTC+TGG - tig0018557:19462-19481 Msa1367790:intergenic 65.0%
CCAGACCCCAACACCCAAGC+TGG + tig0018557:19459-19478 Msa1367790:intron 65.0%
! GTGGCCCAGCTTGGGTGTTG+GGG - tig0018557:19467-19486 Msa1367790:intergenic 65.0%
TCGGTGGTTCAGAGGTCGCG+AGG - tig0018557:19537-19556 Msa1367790:intergenic 65.0%
GGCTTCGAGATCGGGAGTCG+GGG - tig0018557:19730-19749 Msa1367790:intergenic 65.0%
! CGGTGGTGATGCAGTGGTGG+TGG - tig0018557:20086-20105 Msa1367790:intergenic 65.0%
! GTTGCGCGGTGGTGATGCAG+TGG - tig0018557:20092-20111 Msa1367790:intergenic 65.0%
!! ATGGTGGTGGTGTTGCGCGG+TGG - tig0018557:20103-20122 Msa1367790:intergenic 65.0%
CAAAACACGGGCAGCGACGC+CGG + tig0018557:20210-20229 Msa1367790:intron 65.0%
!! GCAGCGACGCCGGTTTGAAG+CGG + tig0018557:20220-20239 Msa1367790:intron 65.0%
TCTGGTGTACCGGGGGCGAG+GGG - tig0018557:19668-19687 Msa1367790:intergenic 70.0%
CTCTGGTGTACCGGGGGCGA+GGG - tig0018557:19669-19688 Msa1367790:intergenic 70.0%
TCTCTGGTGTACCGGGGGCG+AGG - tig0018557:19670-19689 Msa1367790:intergenic 70.0%
! GGGGTGGTGATGCGTGGTGG+TGG - tig0018557:20044-20063 Msa1367790:intergenic 70.0%
! GTGGGGGTGGTGATGCGTGG+TGG - tig0018557:20047-20066 Msa1367790:intergenic 70.0%
! GTGGTGGGGGTGGTGATGCG+TGG - tig0018557:20050-20069 Msa1367790:intergenic 70.0%
! GCGCGGTGGTGATGCAGTGG+TGG - tig0018557:20089-20108 Msa1367790:intergenic 70.0%
!! AGCAGGGCACCCCTCGCCCC+CGG + tig0018557:19656-19675 Msa1367790:intron 80.0%
Chromosome Type Strat End Strand Name
tig0018557 gene 17720 22347 17720 ID=Msa1367790;Name=Msa1367790
tig0018557 mRNA 17720 22347 17720 ID=Msa1367790-mRNA-1;Parent=Msa1367790;Name=Msa1367790-mRNA-1;_AED=0.40;_eAED=0.40;_QI=65|1|1|1|1|1|4|199|358
tig0018557 exon 17720 18048 17720 ID=Msa1367790-mRNA-1:exon:135;Parent=Msa1367790-mRNA-1
tig0018557 exon 20489 20736 20489 ID=Msa1367790-mRNA-1:exon:136;Parent=Msa1367790-mRNA-1
tig0018557 exon 21098 21425 21098 ID=Msa1367790-mRNA-1:exon:137;Parent=Msa1367790-mRNA-1
tig0018557 exon 21912 22347 21912 ID=Msa1367790-mRNA-1:exon:138;Parent=Msa1367790-mRNA-1
tig0018557 five_prime_UTR 17720 17784 17720 ID=Msa1367790-mRNA-1:five_prime_utr;Parent=Msa1367790-mRNA-1
tig0018557 CDS 17785 18048 17785 ID=Msa1367790-mRNA-1:cds;Parent=Msa1367790-mRNA-1
tig0018557 CDS 20489 20736 20489 ID=Msa1367790-mRNA-1:cds;Parent=Msa1367790-mRNA-1
tig0018557 CDS 21098 21425 21098 ID=Msa1367790-mRNA-1:cds;Parent=Msa1367790-mRNA-1
tig0018557 CDS 21912 22148 21912 ID=Msa1367790-mRNA-1:cds;Parent=Msa1367790-mRNA-1
tig0018557 three_prime_UTR 22149 22347 22149 ID=Msa1367790-mRNA-1:three_prime_utr;Parent=Msa1367790-mRNA-1
Gene Sequence

>Msa1367790

ATGGCAGAATCGGTGGGTTCGGCAGAGGTTGATATAATCGGTTGTAAATCAGTTCAAGAACTGTCGTTGGATTCTGAAAATCTACCACCAAATAATTATATCTACAATGAATTAGGTGGTGTTGGATTTCGTGATGCTCTTCTTCCTTCACAATCAGATCTTCATATTCCAGTTGTTGACATTGCCAAACTCATTTCTCCATCTACAGCACAGCAGGAACTTCATAAACTCCACTCTGCTCTCTCTTCTTGGGGATTGTTTCAGGCAATAAACCATGGTATGACAAGCTTGTCTCTTGACAAAGTGAGGGAAATTTCAAAGCAATTCTTTGAACTTCCAAAGGAAGAAAAGCAAAAATATGCAAGGGAGCCAAACGGTATTGAAGGATATGGAAATGATGTAATATTATCAGAAAATCAAAAGCTTGATTGGACTGATAGAGTATATCTTAAGGTACATCCGGAAGATCGGAGGAATTTCAAACTTTGGCCCCAAAAACCCAATGATTTCAGGAATACTATAGAACAATATACTGAAAGTTTAAGGCAGTTATATGAGGTAATTTTAAGAGCCATAGCAAAATCACTGAACTTGGAAGAGGATTGCTTCCTAAAGGAATGTGGAGAGAGAGCTACAATGTTTATGAGAATCAATTACTACCCTCCATGTCCTATGCCTGATCATGTTCTAGGCGTAAAGCCACATGCTGATGGATCATCTATAACTTTTTTGCTGCAAGATAAAGAGGTAGAAGGCCTTCAAGTCCTAAAAGATAATCAGTGGTTTAAAGTTCCAATAATCCCTGATGCTCTCGTGATTAATGTTGGTGATCAAATAGAGATAATGAGCAATGGAATTTTCCAGAGTCCAGTACACAGAGTAGTGATAAATGAAGAAAAGGAAAGGCTCACAGTAGCAATGTTCTGCATCCCAGATTCAGAACAAGAGATTAAACCAGTCGACAGACTAGTGGACGGGACAAAGCCAATATTATACAGACCAGTGAAAAACTATGTTGATTTATATTTTCAATATTACCAACAGGGAAAAAGGCCAATTGAAGCTTCCAAAATTTAA
Protein sequence

>Msa1367790

MAESVGSAEVDIIGCKSVQELSLDSENLPPNNYIYNELGGVGFRDALLPSQSDLHIPVVDIAKLISPSTAQQELHKLHSALSSWGLFQAINHGMTSLSLDKVREISKQFFELPKEEKQKYAREPNGIEGYGNDVILSENQKLDWTDRVYLKVHPEDRRNFKLWPQKPNDFRNTIEQYTESLRQLYEVILRAIAKSLNLEEDCFLKECGERATMFMRINYYPPCPMPDHVLGVKPHADGSSITFLLQDKEVEGLQVLKDNQWFKVPIIPDALVINVGDQIEIMSNGIFQSPVHRVVINEEKERLTVAMFCIPDSEQEIKPVDRLVDGTKPILYRPVKNYVDLYFQYYQQGKRPIEASKI*